CmaCh05G014200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G014200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Growth-regulating factor
Location	Cma_Chr05: 10540072 .. 10541351 (-)
RNA-Seq Expression	CmaCh05G014200
Synteny	CmaCh05G014200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCACGAAACAGGCTCCCATTCACTGCAGCTCAATGGCAAGAGCTAGAACACCAAGCCCTCATCTTCAAGTACATGGTCTCCGGCATCCCTGTCCCTCCTGATCTGCTCTACACCATGAAGAGATCCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGACGGTAACACTTCCTATTTTTCTGTTTTGAACCGTATCATTCATTATGATGCCCAAGTTTTGGGTTTCTATTGTGTGTGCAGTTGGATGGAACTTCGTGCAGATGGGTTCGGGGAGGAAAATCGACCCAGAGCCTGGAAGGTGCAGAAGAACAGACGGCAAAAAATGGAGATGCTCCAAAGAGGCATATCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAACCAACAACAACAATAACTGCTCTAACCTCTAATCCATCTACCCCACCCATCTCCTCCATCACCCACAACTCCACCGCTTCACTCAGCACCAACTCATTTCCCTCTGAAATCCATACCCATTCTTGTTTCAATACTCCTTCTCCTCACCCTTTTCTCTATCAACATGGCTCCTTTTCTAGGCCCCCTGGTTCTGCCCATTTGCAGCACAGCTCCAACCCATCCTTACTTCTGGACCCTCCTGCAGATTACAGGTTTGCACAAAAACACTTCTTTCTGTTTCCGGGATTGTTTGTTTTGAGACTTAACTGAAGATTTTACCCTCTTGTAACCGAGAAGAAGAAATAGGTATGTTTATGGGGGGAAGGAAGATGTTGATAAGCATCCATTTCTATCGGAAGAACATTCTGGGAACATGAGAGGCTTCTCCGCTTCGTCTATGGAAGATCCCTGGCAGCTAACTCCTCTGACAATGAGTTGTTCTTCCTCATCCCCCAGACACAAGAACTGCTCAGCTTTACAAGGTGACTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGCGGTTCCCCTAAGCAAGTGAAGCAAGACGAGCATTACTACGCGGTGGGAAAATATAATGAGATGCAGAGTAAGATGGAACGAGAGAAACCGGAGAAGACTATGCATCACTTCTTTGGTGAATGGTCTCCTAAAGACAGGGAGTCGTGGGTTGATTTGGATGATAAGTCATCCAATACTGGCTCAGTTTCTGAAACTCGGCTTTCAATGTCTATTCTTAACTCGTCGCAGCATGACTTCTCCTCCATTTTCAGTTCCAATAAGCATAATGAAAACTGA

mRNA sequence

ATGAGCGCACGAAACAGGCTCCCATTCACTGCAGCTCAATGGCAAGAGCTAGAACACCAAGCCCTCATCTTCAAGTACATGGTCTCCGGCATCCCTGTCCCTCCTGATCTGCTCTACACCATGAAGAGATCCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGACGTTGGATGGAACTTCGTGCAGATGGGTTCGGGGAGGAAAATCGACCCAGAGCCTGGAAGGTGCAGAAGAACAGACGGCAAAAAATGGAGATGCTCCAAAGAGGCATATCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAACCAACAACAACAATAACTGCTCTAACCTCTAATCCATCTACCCCACCCATCTCCTCCATCACCCACAACTCCACCGCTTCACTCAGCACCAACTCATTTCCCTCTGAAATCCATACCCATTCTTGTTTCAATACTCCTTCTCCTCACCCTTTTCTCTATCAACATGGCTCCTTTTCTAGGCCCCCTGGTTCTGCCCATTTGCAGCACAGCTCCAACCCATCCTTACTTCTGGACCCTCCTGCAGATTACAGAAGAAATAGGTATGTTTATGGGGGGAAGGAAGATGTTGATAAGCATCCATTTCTATCGGAAGAACATTCTGGGAACATGAGAGGCTTCTCCGCTTCGTCTATGGAAGATCCCTGGCAGCTAACTCCTCTGACAATGAGTTGTTCTTCCTCATCCCCCAGACACAAGAACTGCTCAGCTTTACAAGGTGACTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGCGGTTCCCCTAAGCAAGTGAAGCAAGACGAGCATTACTACGCGGTGGGAAAATATAATGAGATGCAGAGTAAGATGGAACGAGAGAAACCGGAGAAGACTATGCATCACTTCTTTGGTGAATGGTCTCCTAAAGACAGGGAGTCGTGGGTTGATTTGGATGATAAGTCATCCAATACTGGCTCAGTTTCTGAAACTCGGCTTTCAATGTCTATTCTTAACTCGTCGCAGCATGACTTCTCCTCCATTTTCAGTTCCAATAAGCATAATGAAAACTGA

Coding sequence (CDS)

ATGAGCGCACGAAACAGGCTCCCATTCACTGCAGCTCAATGGCAAGAGCTAGAACACCAAGCCCTCATCTTCAAGTACATGGTCTCCGGCATCCCTGTCCCTCCTGATCTGCTCTACACCATGAAGAGATCCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGACGTTGGATGGAACTTCGTGCAGATGGGTTCGGGGAGGAAAATCGACCCAGAGCCTGGAAGGTGCAGAAGAACAGACGGCAAAAAATGGAGATGCTCCAAAGAGGCATATCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAACCAACAACAACAATAACTGCTCTAACCTCTAATCCATCTACCCCACCCATCTCCTCCATCACCCACAACTCCACCGCTTCACTCAGCACCAACTCATTTCCCTCTGAAATCCATACCCATTCTTGTTTCAATACTCCTTCTCCTCACCCTTTTCTCTATCAACATGGCTCCTTTTCTAGGCCCCCTGGTTCTGCCCATTTGCAGCACAGCTCCAACCCATCCTTACTTCTGGACCCTCCTGCAGATTACAGAAGAAATAGGTATGTTTATGGGGGGAAGGAAGATGTTGATAAGCATCCATTTCTATCGGAAGAACATTCTGGGAACATGAGAGGCTTCTCCGCTTCGTCTATGGAAGATCCCTGGCAGCTAACTCCTCTGACAATGAGTTGTTCTTCCTCATCCCCCAGACACAAGAACTGCTCAGCTTTACAAGGTGACTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGCGGTTCCCCTAAGCAAGTGAAGCAAGACGAGCATTACTACGCGGTGGGAAAATATAATGAGATGCAGAGTAAGATGGAACGAGAGAAACCGGAGAAGACTATGCATCACTTCTTTGGTGAATGGTCTCCTAAAGACAGGGAGTCGTGGGTTGATTTGGATGATAAGTCATCCAATACTGGCTCAGTTTCTGAAACTCGGCTTTCAATGTCTATTCTTAACTCGTCGCAGCATGACTTCTCCTCCATTTTCAGTTCCAATAAGCATAATGAAAACTGA

Protein sequence

MSARNRLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWNFVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTTITALTSNPSTPPISSITHNSTASLSTNSFPSEIHTHSCFNTPSPHPFLYQHGSFSRPPGSAHLQHSSNPSLLLDPPADYRRNRYVYGGKEDVDKHPFLSEEHSGNMRGFSASSMEDPWQLTPLTMSCSSSSPRHKNCSALQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYNEMQSKMEREKPEKTMHHFFGEWSPKDRESWVDLDDKSSNTGSVSETRLSMSILNSSQHDFSSIFSSNKHNEN

Homology

[Close]

BLAST of CmaCh05G014200 vs. ExPASy Swiss-Prot
Match: Q8L8A6 (Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.1e-47
Identity = 157/406 (38.67%), Postives = 199/406 (49.01%), Query Frame = 0


Query: 6   RLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWN 65
           R PFT  QW+ELEHQALI+KYMVSG+PVPP+L+++++R SLDT  +SRL PHQ   +GW 
Sbjct: 14  RPPFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRR-SLDTSLVSRLLPHQ--SLGWG 73

Query: 66  FVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTT 125
             QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++  +  T
Sbjct: 74  CYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD--QNQT 133

Query: 126 TITALTS---------NPSTPPISSITHNS---TASLSTNSFP------------SEIHT 185
           T T LTS         NPS    SS + NS   T S S++S              S  +T
Sbjct: 134 TTTPLTSPSLSFTNNNNPSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNRFGLGGSSSNT 193

Query: 186 HSCFNTPSPHPFLYQHGSFSRPPGSAHLQHSSNPSL-----------LLDPPADYRRNRY 245
              FN+   H   Y + S S       L H+S  SL           +L    D++  RY
Sbjct: 194 RGYFNS---HSLDYPYPSTSPKQQQQTLHHASALSLHQNTNSTSQFNVLASATDHKDFRY 253

Query: 246 VYGGKE---DVDKHPFLSEEHSGNMRGFS-----------ASSMEDPWQLTPL------- 305
             G  E    V +  F  E      R F            A+ M DP+            
Sbjct: 254 FQGIGERVGGVGERTFFPEA----SRSFQDSPYHHHQQPLATVMNDPYHHCSTDHNKIDH 313

Query: 306 --TMSCSSSSP--------RHKNCSALQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYN 342
             T S SSSS         R + C  L  D  +         S +Q +  E         
Sbjct: 314 HHTYSSSSSSQHLHHDHDHRQQQCFVLGADMFNKPTRSVLANSSRQDQNQEE-------- 373

[Close]

BLAST of CmaCh05G014200 vs. ExPASy Swiss-Prot
Match: Q6AWY8 (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-45
Identity = 158/415 (38.07%), Postives = 209/415 (50.36%), Query Frame = 0


Query: 6   RLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRS-SLDTPFI---SRLFPHQYPD 65
           R PFTA+QWQELEHQALI+KYM SG P+P DL+  ++RS  LD+      S  FP Q P 
Sbjct: 16  RYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQ-PS 75

Query: 66  VGWNFVQMGSGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 125
           +GW    MG GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVE+
Sbjct: 76  LGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEM 135

Query: 126 LKPTTTITALTSNPSTPPISSITHNSTASLSTNSFPSEIHTHS---CFNTPSPH---PFL 185
                      S  + PP SS   ++ ++ S    P+   T S    ++ P+PH   P+ 
Sbjct: 136 -----------SLATPPPPSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQ 195

Query: 186 YQHG-----SFSRPPGSAHLQHSSNP-SLLLD------PPA----DYRRNRYVYGGKEDV 245
             +G     + +R P +A      +P  L LD      PP+    D++   Y +  KE  
Sbjct: 196 ALYGGPYAAATARTPAAAAYHAQVSPFHLQLDTTHPHPPPSYYSMDHKEYAYGHATKEVH 255

Query: 246 DKHPFLSE----EHSGNMRG-----FSASSMEDPWQLTPLTMSC----SSSSPRHKNCSA 305
            +H F S+    EH     G     F    ME     TPL        +++SP   + S 
Sbjct: 256 GEHAFFSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSK 315

Query: 306 LQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYNEMQSKMEREKP---------EKTMHH 365
              D     Q Q       Q +Q +H + +G      + +  EKP         +K + H
Sbjct: 316 EDDDEKERRQQQ-------QQQQQQHCFLLG------ADLRLEKPAGHDHAAAAQKPLRH 375

Query: 366 FFGEWSPKDRESWVDLDDKSSNTGSVSETRLSMSILNSSQHDFSSIFSSNKHNEN 372
           FF EW P ++ S      K S  G   ET+LSMSI   + +D     +S  HN++
Sbjct: 376 FFDEW-PHEKNS------KGSWMGLEGETQLSMSI-PMAANDLPITTTSRYHNDD 397

[Close]

BLAST of CmaCh05G014200 vs. ExPASy Swiss-Prot
Match: A2XA73 (Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-44
Identity = 154/410 (37.56%), Postives = 207/410 (50.49%), Query Frame = 0


Query: 6   RLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRS-SLDTPFI---SRLFPHQYPD 65
           R PFTA+QWQELEHQALI+KYM SG P+P DL+  ++RS  LD+      S  FP Q P 
Sbjct: 16  RYPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQ-PS 75

Query: 66  VGWNFVQMGSGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 125
           +GW    MG GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPVE 
Sbjct: 76  LGWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVE- 135

Query: 126 LKPTTTITALTSNPSTPPISSITHNSTASL----STNSFPSEIHTHSCFNTPSPHPFLY- 185
                 ++  T  P +   +S   NS+A +    +T S P+  ++    +  +P+  LY 
Sbjct: 136 ------MSLATPPPPSSSATSAASNSSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYG 195

Query: 186 --QHGSFSRPPGSAHLQHSSNP-SLLLD------PPA----DYRRNRYVYGGKEDVDKHP 245
                + +R P +A      +P  L +D      PP+    D++   Y +  KE   +H 
Sbjct: 196 GPYAAATARTPAAAAYHAQVSPFHLHIDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHA 255

Query: 246 FLSE----EHSGNMRG-----FSASSMEDPWQLTPLTMSC----SSSSPRHKNCSALQGD 305
           F S+    EH     G     F    ME     TPL        +++SP   + S    D
Sbjct: 256 FFSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDD 315

Query: 306 YSSYLQLQSFGGSPKQVKQDEHYYAVGKYNEMQSKMEREKP---------EKTMHHFFGE 365
                Q        +Q +Q +H + +G      + +  EKP         +K + HFF E
Sbjct: 316 EKERRQ--------QQQQQQQHCFLLG------ADLRLEKPAGHDHAAAAQKPLRHFFDE 375

Query: 366 WSPKDRESWVDLDDKSSNTGSVSETRLSMSILNSSQHDFSSIFSSNKHNE 371
           W P ++ S      K S  G   ET+LSMSI   + +D     +S  HN+
Sbjct: 376 W-PHEKNS------KGSWMGLEGETQLSMSI-PMAANDLPITTTSRYHND 395

[Close]

BLAST of CmaCh05G014200 vs. ExPASy Swiss-Prot
Match: Q6ZIK5 (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.6e-42
Identity = 147/377 (38.99%), Postives = 202/377 (53.58%), Query Frame = 0


Query: 8   PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWNFV 67
           PFTAAQ++ELE QALI+KY+V+G+PVPPDL+  ++R  LD+   +R + H     G  F 
Sbjct: 64  PFTAAQYEELEQQALIYKYLVAGVPVPPDLVLPIRR-GLDS-LAARFYNHPALGYGPYF- 123

Query: 68  QMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTTI 127
               G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPVE     T +
Sbjct: 124 ----GKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVE-----TQL 183

Query: 128 TALTSNPSTPPISSITHNSTASLSTNSFPSEIHTHSCFNTPSPHPFLYQHGSFSRPPGSA 187
            A     S PP SS+  ++ A L+  S  S    HS          LY   + S   G  
Sbjct: 184 VA----QSQPP-SSVVGSAAAPLAAASNGSSFQNHS----------LYPAIAGSNGGGGG 243

Query: 188 HLQHSSNPSLL-----LDPPADYRRNRYVYGGK-EDVDKHPF----LSEEHSGNMRGFSA 247
               SS  S L     +D  A Y     V GG  +D+    +    L++E S  +     
Sbjct: 244 RNMPSSFGSALGSQLHMDNAAPYAA---VGGGTGKDLRYTAYGTRSLADEQSQLITEAIN 303

Query: 248 SSMEDPWQLTPLTMSCSSSSPRHKNCSALQGDYSSYLQLQSFG----GSPKQVKQDEHYY 307
           +S+E+PW+L P     S +SP            SSY QL +       +P  + + +   
Sbjct: 304 TSIENPWRLLP-----SQNSP---------FPLSSYSQLGALSDLGQNTPSSLSKVQRQP 363

Query: 308 AVGKYNEMQSKMEREKPEKTMHHFFGEWSPKDRESWVDLDDKSSNTGSVSETRLSMSILN 367
                N+  +    ++  +T+  FF EW PK R+SW DL D+++N  S S T+LS+SI  
Sbjct: 364 LSFFGNDYAAVDSVKQENQTLRPFFDEW-PKGRDSWSDLADENANLSSFSGTQLSISIPM 394

Query: 368 SSQHDFSSIFSSNKHNE 371
           +S  DFS+  S + + +
Sbjct: 424 ASS-DFSAASSRSTNGD 394

[Close]

BLAST of CmaCh05G014200 vs. ExPASy Swiss-Prot
Match: Q6AWY6 (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-41
Identity = 147/368 (39.95%), Postives = 196/368 (53.26%), Query Frame = 0


Query: 8   PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWNFV 67
           PFTAAQ++ELE QALI+KY+V+G+PVP DLL  ++R  LD+   SR + H     G  F 
Sbjct: 53  PFTAAQYEELEQQALIYKYLVAGVPVPADLLLPIRR-GLDS-LASRFYHHPVLGYGSYF- 112

Query: 68  QMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTTI 127
               G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPVE       +
Sbjct: 113 ----GKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVE----AQLV 172

Query: 128 TALTSNPSTPPISSITHNSTASLSTNSFPSEIHTHSCFNTPSPHPFLYQHGSFSRPPGSA 187
              +  P+T P +++T  STA  + + +P      +  N    +      G     PGS 
Sbjct: 173 APHSQPPATAPAAAVT--STAFQNHSLYP------AIANGGGANGGGGGGGGGGSAPGSF 232

Query: 188 HLQHSSNPSLLLDPPADYRRNRYVYGGKE----DVDKHPFLSEEHSGNMRGFSASSMEDP 247
            L   SN  L +D  A Y       G K+         P L++EHS  + G   +S+++ 
Sbjct: 233 AL--GSNTQLHMDNAASYSTVAAGAGNKDFRYSAYGVRP-LADEHSPLITGAMDTSIDNS 292

Query: 248 WQLTPLTMS--CSSSSPRHKNCSALQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYNEM 307
           W L P   S    SS P   N S L  D ++   L      PK  ++   ++        
Sbjct: 293 WCLLPSQTSTFSVSSYPMLGNLSEL--DQNTICSL------PKVEREPLSFFGSDYVTVD 352

Query: 308 QSKMEREKPEKTMHHFFGEWSPKDRESWVDLDDKSSNTGSVSETRLSMSILNSSQHDFSS 367
             K E +    T+  FF EW PK R+SW DL D +S   + S T+LS+SI  ++  DFS+
Sbjct: 353 SGKQENQ----TLRPFFDEW-PKARDSWPDLADDNS-LATFSATQLSISIPMATS-DFST 382

Query: 368 IFSSNKHN 370
             SS  HN
Sbjct: 413 T-SSRSHN 382

[Close]

BLAST of CmaCh05G014200 vs. TAIR 10
Match: AT3G13960.1 (growth-regulating factor 5 )

HSP 1 Score: 190.7 bits (483), Expect = 2.2e-48
Identity = 157/406 (38.67%), Postives = 199/406 (49.01%), Query Frame = 0


Query: 6   RLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWN 65
           R PFT  QW+ELEHQALI+KYMVSG+PVPP+L+++++R SLDT  +SRL PHQ   +GW 
Sbjct: 14  RPPFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRR-SLDTSLVSRLLPHQ--SLGWG 73

Query: 66  FVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTT 125
             QMG GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK ++  +  T
Sbjct: 74  CYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLD--QNQT 133

Query: 126 TITALTS---------NPSTPPISSITHNS---TASLSTNSFP------------SEIHT 185
           T T LTS         NPS    SS + NS   T S S++S              S  +T
Sbjct: 134 TTTPLTSPSLSFTNNNNPSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNRFGLGGSSSNT 193

Query: 186 HSCFNTPSPHPFLYQHGSFSRPPGSAHLQHSSNPSL-----------LLDPPADYRRNRY 245
              FN+   H   Y + S S       L H+S  SL           +L    D++  RY
Sbjct: 194 RGYFNS---HSLDYPYPSTSPKQQQQTLHHASALSLHQNTNSTSQFNVLASATDHKDFRY 253

Query: 246 VYGGKE---DVDKHPFLSEEHSGNMRGFS-----------ASSMEDPWQLTPL------- 305
             G  E    V +  F  E      R F            A+ M DP+            
Sbjct: 254 FQGIGERVGGVGERTFFPEA----SRSFQDSPYHHHQQPLATVMNDPYHHCSTDHNKIDH 313

Query: 306 --TMSCSSSSP--------RHKNCSALQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYN 342
             T S SSSS         R + C  L  D  +         S +Q +  E         
Sbjct: 314 HHTYSSSSSSQHLHHDHDHRQQQCFVLGADMFNKPTRSVLANSSRQDQNQEE-------- 373

[Close]

BLAST of CmaCh05G014200 vs. TAIR 10
Match: AT2G06200.1 (growth-regulating factor 6 )

HSP 1 Score: 163.3 bits (412), Expect = 3.7e-40
Identity = 78/120 (65.00%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 6   RLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKR------SSLDTPFISRLFPHQY 65
           R+PFT +QW+ELE+QAL+FKY+ + +PVPP LL+ +KR      SS  +   S   P   
Sbjct: 4   RIPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLS 63

Query: 66  PDVGWNFVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR--SRKP 118
           P  GWN  +MG GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR  SRKP
Sbjct: 64  PHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKP 123

[Close]

BLAST of CmaCh05G014200 vs. TAIR 10
Match: AT4G37740.1 (growth-regulating factor 2 )

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-31
Identity = 108/298 (36.24%), Postives = 149/298 (50.00%), Query Frame = 0


Query: 8   PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWNFV 67
           PFT  QW ELE QALI+KY+ + +PVP  LL ++K+S    P+ S L P  +   GW   
Sbjct: 164 PFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKSFY--PYGS-LPPSSF---GWGTF 223

Query: 68  QMG-SGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTT 127
            +G +G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPVEV      
Sbjct: 224 HLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEVQSGQNQ 283

Query: 128 ITALTS----NPSTPPISSITHNSTASLSTN---------------SFPS----EIHTHS 187
             A  S     P  P ++  T+ S A  S+N               S P+     I+  +
Sbjct: 284 TAAAASKAVTTPQQPVVAGNTNRSNARASSNRSLAIGSQYINPSTESLPNNRGVSIYPST 343

Query: 188 CFNTPSPHPFLYQ-HGSFSRPPGSAHLQHSSNPSLLLDPPADYRRNRYVYGGK-EDVDKH 247
               P   P ++Q H + + P    H+   S    LL+P          YG    D   +
Sbjct: 344 VNLQPKESPVIHQKHRNNNNPFEFGHISSDS----LLNP-----NTAKTYGSSFLDFSSN 403

Query: 248 PFLSEEHSGNMRGFS-ASSMEDPWQLTPLTMSCSSSSP--RHKNCSALQGDYSSYLQL 277
               E+HSGN    S    +   W    +++  +SSSP   H N +A +    S L+L
Sbjct: 404 ---QEKHSGNHNHNSWPEELTSDWTQLSMSIPIASSSPSSTHNNNNAQEKTTLSPLRL 443

[Close]

BLAST of CmaCh05G014200 vs. TAIR 10
Match: AT2G22840.1 (growth-regulating factor 1 )

HSP 1 Score: 129.4 bits (324), Expect = 5.9e-30
Identity = 69/145 (47.59%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 8   PFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSLDTPFISRLFPHQYPDVGWNFV 67
           PF+  QW ELE QALI+KY+ + +PVP  LL ++K+S    P+ S L P+ +   GW   
Sbjct: 133 PFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKSFF--PYGS-LPPNSF---GWGSF 192

Query: 68  QMG-SGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTT 127
            +G SG  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPVE      T
Sbjct: 193 HLGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEGQNGHNT 252

Query: 128 ITALTSNPSTPPISSITHNSTASLS 152
             A  ++ +    ++    + A  S
Sbjct: 253 NAAAAASAAAASTAAAVSKAAAGTS 271

[Close]

BLAST of CmaCh05G014200 vs. TAIR 10
Match: AT3G52910.1 (growth-regulating factor 4 )

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-28
Identity = 77/167 (46.11%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 9   FTAAQWQELEHQALIFKYMVSGIPVPPDLLYTMKRSSL-DTPF------ISRLFPHQYPD 68
           F+ AQWQELE QALI++YM++G  VP +LL  +K+S L  +P       +   FPH  P 
Sbjct: 83  FSWAQWQELELQALIYRYMLAGASVPQELLLPIKKSLLHQSPMHFLHHPLQHSFPHHQPS 142

Query: 69  VGWNFVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVL 128
             W     G G  +DPEPGRC+RTDGKKWRCS++     KYC+RH+HRG+NRSRKPVE  
Sbjct: 143 WYW-----GRG-AMDPEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNRSRKPVETA 202

Query: 129 KPTTTITALTSNPSTPPISSITH---NSTASLSTNSFPSEI-HTHSC 165
             T T TA T+  S      + H   N+    S +S P  + H  SC
Sbjct: 203 TTTITTTATTTASSFVLGEELGHGPNNNHFFSSGSSQPLHLSHQQSC 243

The following BLAST results are available for this feature:

BLAST of CmaCh05G014200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A6	3.1e-47	38.67	Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1	[more]
Q6AWY8	1.7e-45	38.07	Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3...	[more]
A2XA73	1.1e-44	37.56	Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 S...	[more]
Q6ZIK5	6.6e-42	38.99	Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1...	[more]
Q6AWY6	1.9e-41	39.95	Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3...	[more]

BLAST of CmaCh05G014200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13960.1	2.2e-48	38.67	growth-regulating factor 5	[more]
AT2G06200.1	3.7e-40	65.00	growth-regulating factor 6	[more]
AT4G37740.1	3.1e-31	36.24	growth-regulating factor 2	[more]
AT2G22840.1	5.9e-30	47.59	growth-regulating factor 1	[more]
AT3G52910.1	1.5e-28	46.11	growth-regulating factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014978	Glutamine-Leucine-Glutamine, QLQ	SMART	SM00951	QLQ_2	coord: 7..43 e-value: 1.4E-9 score: 47.8
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PFAM	PF08880	QLQ	coord: 8..38 e-value: 5.6E-15 score: 54.8
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PROSITE	PS51666	QLQ	coord: 8..43 score: 21.822929
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 77..119 e-value: 7.7E-21 score: 73.5
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 76..120 score: 24.979784
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..197
None	No IPR available	PANTHER	PTHR31602:SF60	GROWTH-REGULATING FACTOR 5	coord: 2..338
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 2..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G014200.1	CmaCh05G014200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding