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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGACTCCTCCCTCTTCTCTTTCAATACCTCTCTCTCTCCCAAACCCTCTTCTCTCTTCCGACGCCCCCTTCGCCGGAATTCTTCCCCCCCTTTCACCATCGCCTGCCCCTCCGCCACCTCCGACTCTACCGCCTCCCCTGTTCTCGACTCTTCCTTGCCGCTCGGAGTTCAGAATCCGCAGTTCGCTTGTGTCGATATCCAAGATGACTCTCATCGCAGTCGTTCCGTTGCTGGCGACGGCGGCCGTAATTTCTCTGCGAAGTATGTGCCGTTTGGTTCTGGCTTTGATTCATCCGAATGGTACTCGCTCGACGAAATCGTTTATCGGAGCCAATCCGGCGGGCTGCTCGACGTTCAGCACAACATGGAAGCGTTGAAGGAGTTCGATGGAGCGTATTGGCGGAATCTGTTCGATTCGCGTGTAGGGAAGACGACCTGGCCGTACGGTTCCGGCGTGTGGAGCAAGAAAGAGTGGGTGCTGCCGGAGATTGACTCCAGCGACATCGTTAGCGCCTTCGAAGGAAATTCGAATCTCTTCTGGGCGGAGCGTTTTGGGAAGGAGTTTCTAGGCATGAACGATCTGTGGGTCAAACATTGCGGGATTAGCCACACCGGCAGTTTTAAAGACCTTGGAATGACTGTTTTGGTCAGCCAAGTCAACCGCCTCCGGAAAATGAATCGCCCGGTCGTCGGTGTCGGCTGCGCCTCCACTGGAGACACCTCCGCCGCTCTCTCTGCTTATTGCGCCGCCGCAGGAATTCCGTCCATTGTCTTCCTCCCGGCCGATAAGATTTCCATGGCACAATTAGTTCAGCCGATTGCAAACGGCGCTTTCGTCTTAAGCATGGACACCGATTTCGACGGATGTATGAAATTAATCAGGGAAATCACGGCGGAGCTTCCGATTTATCTGGCGAATTCGCTCAATAGTTTGAGACTGGAAGGGCAAAAGACGGCGGCCATTGAAATCCTTCAACAGTTCGATTGGGAAGTGCCAGATTGGGTAATCATACCAGGGGGAAACCTAGGGAATATATATGCGTTTTACAAAGGCTTCCAAATGTGCAAAGAATTAGGTCTTGTGGACAAGATTCCACGGCTGGTTTGTGCTCAAGCGGCAAATGCAAATCCGCTTTACTTGTATTACAAATCTGGCTGGAAAGAGTTCTCGCCATTGAAGGCGAGCACCACTTTCGCTTCTGCAATACAGATTGGGGATCCGGTTTCCATTGACAGAGCCGTGTTTGCTTTGAAAAATTCCGGCGGAATCGTGGAAGAAGCGACGGAGGAGGAACTAATGGACGCAACAGCTCAGGCTGATTCGACGGGAATGTTCATTTGCCCTCACACGGGAGTGGCGTTAACGGCTCTGATTAAGCTGAGAAACAGGGGCGTGATCAAAGGCAGTGATCGGACGGTGGTAGTAAGCACTGCTCATGGTCTGAAATTCACTCAATCCAAGATCGATTACCATTCGAGAGCAATCCAGGGCATGGAGTGCCGATTTGCAAACCCGCCGGTGGAAGTGAAGGCGGATTTTGGGGCTGTAATGGATGTTCTTAAGGAGCATCTGTCGAGGAAGAATCCAAAAATGGAGCTATAG mRNA sequence ATGGACTCCTCCCTCTTCTCTTTCAATACCTCTCTCTCTCCCAAACCCTCTTCTCTCTTCCGACGCCCCCTTCGCCGGAATTCTTCCCCCCCTTTCACCATCGCCTGCCCCTCCGCCACCTCCGACTCTACCGCCTCCCCTGTTCTCGACTCTTCCTTGCCGCTCGGAGTTCAGAATCCGCAGTTCGCTTGTGTCGATATCCAAGATGACTCTCATCGCAGTCGTTCCGTTGCTGGCGACGGCGGCCGTAATTTCTCTGCGAAGTATGTGCCGTTTGGTTCTGGCTTTGATTCATCCGAATGGTACTCGCTCGACGAAATCGTTTATCGGAGCCAATCCGGCGGGCTGCTCGACGTTCAGCACAACATGGAAGCGTTGAAGGAGTTCGATGGAGCGTATTGGCGGAATCTGTTCGATTCGCGTGTAGGGAAGACGACCTGGCCGTACGGTTCCGGCGTGTGGAGCAAGAAAGAGTGGGTGCTGCCGGAGATTGACTCCAGCGACATCGTTAGCGCCTTCGAAGGAAATTCGAATCTCTTCTGGGCGGAGCGTTTTGGGAAGGAGTTTCTAGGCATGAACGATCTGTGGGTCAAACATTGCGGGATTAGCCACACCGGCAGTTTTAAAGACCTTGGAATGACTGTTTTGGTCAGCCAAGTCAACCGCCTCCGGAAAATGAATCGCCCGGTCGTCGGTGTCGGCTGCGCCTCCACTGGAGACACCTCCGCCGCTCTCTCTGCTTATTGCGCCGCCGCAGGAATTCCGTCCATTGTCTTCCTCCCGGCCGATAAGATTTCCATGGCACAATTAGTTCAGCCGATTGCAAACGGCGCTTTCGTCTTAAGCATGGACACCGATTTCGACGGATGTATGAAATTAATCAGGGAAATCACGGCGGAGCTTCCGATTTATCTGGCGAATTCGCTCAATAGTTTGAGACTGGAAGGGCAAAAGACGGCGGCCATTGAAATCCTTCAACAGTTCGATTGGGAAGTGCCAGATTGGGTAATCATACCAGGGGGAAACCTAGGGAATATATATGCGTTTTACAAAGGCTTCCAAATGTGCAAAGAATTAGGTCTTGTGGACAAGATTCCACGGCTGGTTTGTGCTCAAGCGGCAAATGCAAATCCGCTTTACTTGTATTACAAATCTGGCTGGAAAGAGTTCTCGCCATTGAAGGCGAGCACCACTTTCGCTTCTGCAATACAGATTGGGGATCCGGTTTCCATTGACAGAGCCGTGTTTGCTTTGAAAAATTCCGGCGGAATCGTGGAAGAAGCGACGGAGGAGGAACTAATGGACGCAACAGCTCAGGCTGATTCGACGGGAATGTTCATTTGCCCTCACACGGGAGTGGCGTTAACGGCTCTGATTAAGCTGAGAAACAGGGGCGTGATCAAAGGCAGTGATCGGACGGTGGTAGTAAGCACTGCTCATGGTCTGAAATTCACTCAATCCAAGATCGATTACCATTCGAGAGCAATCCAGGGCATGGAGTGCCGATTTGCAAACCCGCCGGTGGAAGTGAAGGCGGATTTTGGGGCTGTAATGGATGTTCTTAAGGAGCATCTGTCGAGGAAGAATCCAAAAATGGAGCTATAG Coding sequence (CDS) ATGGACTCCTCCCTCTTCTCTTTCAATACCTCTCTCTCTCCCAAACCCTCTTCTCTCTTCCGACGCCCCCTTCGCCGGAATTCTTCCCCCCCTTTCACCATCGCCTGCCCCTCCGCCACCTCCGACTCTACCGCCTCCCCTGTTCTCGACTCTTCCTTGCCGCTCGGAGTTCAGAATCCGCAGTTCGCTTGTGTCGATATCCAAGATGACTCTCATCGCAGTCGTTCCGTTGCTGGCGACGGCGGCCGTAATTTCTCTGCGAAGTATGTGCCGTTTGGTTCTGGCTTTGATTCATCCGAATGGTACTCGCTCGACGAAATCGTTTATCGGAGCCAATCCGGCGGGCTGCTCGACGTTCAGCACAACATGGAAGCGTTGAAGGAGTTCGATGGAGCGTATTGGCGGAATCTGTTCGATTCGCGTGTAGGGAAGACGACCTGGCCGTACGGTTCCGGCGTGTGGAGCAAGAAAGAGTGGGTGCTGCCGGAGATTGACTCCAGCGACATCGTTAGCGCCTTCGAAGGAAATTCGAATCTCTTCTGGGCGGAGCGTTTTGGGAAGGAGTTTCTAGGCATGAACGATCTGTGGGTCAAACATTGCGGGATTAGCCACACCGGCAGTTTTAAAGACCTTGGAATGACTGTTTTGGTCAGCCAAGTCAACCGCCTCCGGAAAATGAATCGCCCGGTCGTCGGTGTCGGCTGCGCCTCCACTGGAGACACCTCCGCCGCTCTCTCTGCTTATTGCGCCGCCGCAGGAATTCCGTCCATTGTCTTCCTCCCGGCCGATAAGATTTCCATGGCACAATTAGTTCAGCCGATTGCAAACGGCGCTTTCGTCTTAAGCATGGACACCGATTTCGACGGATGTATGAAATTAATCAGGGAAATCACGGCGGAGCTTCCGATTTATCTGGCGAATTCGCTCAATAGTTTGAGACTGGAAGGGCAAAAGACGGCGGCCATTGAAATCCTTCAACAGTTCGATTGGGAAGTGCCAGATTGGGTAATCATACCAGGGGGAAACCTAGGGAATATATATGCGTTTTACAAAGGCTTCCAAATGTGCAAAGAATTAGGTCTTGTGGACAAGATTCCACGGCTGGTTTGTGCTCAAGCGGCAAATGCAAATCCGCTTTACTTGTATTACAAATCTGGCTGGAAAGAGTTCTCGCCATTGAAGGCGAGCACCACTTTCGCTTCTGCAATACAGATTGGGGATCCGGTTTCCATTGACAGAGCCGTGTTTGCTTTGAAAAATTCCGGCGGAATCGTGGAAGAAGCGACGGAGGAGGAACTAATGGACGCAACAGCTCAGGCTGATTCGACGGGAATGTTCATTTGCCCTCACACGGGAGTGGCGTTAACGGCTCTGATTAAGCTGAGAAACAGGGGCGTGATCAAAGGCAGTGATCGGACGGTGGTAGTAAGCACTGCTCATGGTCTGAAATTCACTCAATCCAAGATCGATTACCATTCGAGAGCAATCCAGGGCATGGAGTGCCGATTTGCAAACCCGCCGGTGGAAGTGAAGGCGGATTTTGGGGCTGTAATGGATGTTCTTAAGGAGCATCTGTCGAGGAAGAATCCAAAAATGGAGCTATAG Protein sequence MDSSLFSFNTSLSPKPSSLFRRPLRRNSSPPFTIACPSATSDSTASPVLDSSLPLGVQNPQFACVDIQDDSHRSRSVAGDGGRNFSAKYVPFGSGFDSSEWYSLDEIVYRSQSGGLLDVQHNMEALKEFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSSDIVSAFEGNSNLFWAERFGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPADKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCAQAANANPLYLYYKSGWKEFSPLKASTTFASAIQIGDPVSIDRAVFALKNSGGIVEEATEEELMDATAQADSTGMFICPHTGVALTALIKLRNRGVIKGSDRTVVVSTAHGLKFTQSKIDYHSRAIQGMECRFANPPVEVKADFGAVMDVLKEHLSRKNPKMEL
Homology
BLAST of CmaCh05G014140 vs. ExPASy Swiss-Prot
Match: Q9MT28 (Threonine synthase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 827.0 bits (2135), Expect = 1.2e-238 Identity = 399/464 (85.99%), Postives = 433/464 (93.32%), Query Frame = 0
Query: 69 DDSHRSRSVAGDGGRNFSAKYVPFGSGFDSSEWYSLDEIVYRSQSGGLLDVQHNMEALKE 128
D++ R + NFSA+YVPF +G +S EWYSLDEIVYRS+SGGLLDVQH+M+ALK+
Sbjct: 56 DENIREEARRHCSSHNFSARYVPFNAGPNSDEWYSLDEIVYRSRSGGLLDVQHDMDALKK 115
Query: 129 FDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSSDIVSAFEGNSNLFWAERFGKE 188
FDG YWR+LFDSRVGKTTWPYGSGVWSKKEWVLPEIDS DIVSAFEGNSNLFWAERFGK+
Sbjct: 116 FDGQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKQ 175
Query: 189 FLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAY 248
FLGM DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM++PVVGVGCASTGDTSAALSAY
Sbjct: 176 FLGMTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAY 235
Query: 249 CAAAGIPSIVFLPADKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREITAELPIYLANS 308
CA+AGIPSIVFLPA+KISMAQLVQPIANGAFVLS+DTDFDGCM+LIRE+TAELPIYLANS
Sbjct: 236 CASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANS 295
Query: 309 LNSLRLEGQKTAAIEILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRL 368
LNSLRLEGQKTAAIEILQQFDWEVP+WVI+PGGNLGNIYAFYKGFQMCKELGLVD+IPRL
Sbjct: 296 LNSLRLEGQKTAAIEILQQFDWEVPEWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRL 355
Query: 369 VCAQAANANPLYLYYKSGWKEFSPLKASTTFASAIQIGDPVSIDRAVFALKNSGGIVEEA 428
VCAQAANANPLYL+YKSGWK+F P+KA+TTFASAIQIGDPVSIDRAVFAL+ GIVEEA
Sbjct: 356 VCAQAANANPLYLHYKSGWKDFKPVKANTTFASAIQIGDPVSIDRAVFALQQCNGIVEEA 415
Query: 429 TEEELMDATAQADSTGMFICPHTGVALTALIKLRNRGVIKGSDRTVVVSTAHGLKFTQSK 488
TEEELMDA AQADSTGMFICPHTGVALTAL KLRN GVI +DRTVVVSTAHGLKFTQSK
Sbjct: 416 TEEELMDAMAQADSTGMFICPHTGVALTALFKLRNSGVIAPTDRTVVVSTAHGLKFTQSK 475
Query: 489 IDYHSRAIQGMECRFANPPVEVKADFGAVMDVLKEHLSRKNPKM 533
IDYHS+ I+ MECRFANPPVEVKADFG+VMDVLK +L +N K+
Sbjct: 476 IDYHSKEIKDMECRFANPPVEVKADFGSVMDVLKSYLLSQNSKL 519
BLAST of CmaCh05G014140 vs. ExPASy Swiss-Prot
Match: Q9S7B5 (Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS1 PE=1 SV=1) HSP 1 Score: 818.5 bits (2113), Expect = 4.3e-236 Identity = 413/524 (78.82%), Postives = 457/524 (87.21%), Query Frame = 0
Query: 3 SSLFSFN-TSLSPKPSSLFRRPLRRNSSPPFTIACPSATSDSTASPVLDSSLPLGVQNPQ 62
S LF+ + +SL+PK + P+RR+ S P S + + + + V+ P
Sbjct: 4 SCLFNASVSSLNPK-----QDPIRRHRSTSLLRHRPVVISCTADGNNIKAPIETAVKPPH 63
Query: 63 FACVDIQDDSHRSRSVAGDGGRNFSAKYVPFGSGFDSSEWYSLDEIVYRSQSGGLLDVQH 122
+I+D++ R+RS A + FSAKYVPF + S+E YSLDEIVYRS+SGGLLDV+H
Sbjct: 64 RTEDNIRDEARRNRSNAVN---PFSAKYVPFNAAPGSTESYSLDEIVYRSRSGGLLDVEH 123
Query: 123 NMEALKEFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSSDIVSAFEGNSNLFW 182
+MEALK FDGAYWR+LFDSRVGK+TWPYGSGVWSKKEWVLPEID DIVSAFEGNSNLFW
Sbjct: 124 DMEALKRFDGAYWRDLFDSRVGKSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFW 183
Query: 183 AERFGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDT 242
AERFGK+FLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM RPVVGVGCASTGDT
Sbjct: 184 AERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDT 243
Query: 243 SAALSAYCAAAGIPSIVFLPADKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREITAEL 302
SAALSAYCA+AGIPSIVFLPA+KISMAQLVQPIANGAFVLS+DTDFDGCMKLIREITAEL
Sbjct: 244 SAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAEL 303
Query: 303 PIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGL 362
PIYLANSLNSLRLEGQKTAAIEILQQFDW+VPDWVI+PGGNLGNIYAFYKGF+MC+ELGL
Sbjct: 304 PIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGL 363
Query: 363 VDKIPRLVCAQAANANPLYLYYKSGWKEFSPLKASTTFASAIQIGDPVSIDRAVFALKNS 422
VD+IPR+VCAQAANANPLYL+YKSGWK+F P+ ASTTFASAIQIGDPVSIDRAV+ALK
Sbjct: 364 VDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKC 423
Query: 423 GGIVEEATEEELMDATAQADSTGMFICPHTGVALTALIKLRNRGVIKGSDRTVVVSTAHG 482
GIVEEATEEELMDA AQADSTGMFICPHTGVALTAL KLRN+GVI +DRTVVVSTAHG
Sbjct: 424 NGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHG 483
Query: 483 LKFTQSKIDYHSRAIQGMECRFANPPVEVKADFGAVMDVLKEHL 526
LKFTQSKIDYHS AI M CRF+NPPV+VKADFGAVMDVLK +L
Sbjct: 484 LKFTQSKIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYL 519
BLAST of CmaCh05G014140 vs. ExPASy Swiss-Prot
Match: Q9SSP5 (Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 SV=1) HSP 1 Score: 790.0 bits (2039), Expect = 1.6e-227 Identity = 398/504 (78.97%), Postives = 440/504 (87.30%), Query Frame = 0
Query: 24 LRRNSSPPFTIACPSATSDSTASPVLDSSLPLGVQNPQFA-CVDIQDDSHRSRSVAGDGG 83
L+ +S+ FT+ C S ASP + P Q P+ + +I+D++ R
Sbjct: 21 LKPHSAASFTVRCTS------ASPAVPPQTP---QKPRRSPDENIRDEARRRPHQL---- 80
Query: 84 RNFSAKYVPFGSGFDSSEWYSLDEIVYRSQSGGLLDVQHNMEALKEFDGAYWRNLFDSRV 143
+N SA+YVPF + S+E YSLDEIVYRSQSG LLDVQH+ ALK +DG +WRNLFDSRV
Sbjct: 81 QNLSARYVPFNAPPSSTESYSLDEIVYRSQSGALLDVQHDFAALKRYDGEFWRNLFDSRV 140
Query: 144 GKTTWPYGSGVWSKKEWVLPEIDSSDIVSAFEGNSNLFWAERFGKEFLGMNDLWVKHCGI 203
GKT WPYGSGVWSKKEWVLPEID DIVSAFEGNSNLFWAERFGK++L MNDLWVKHCGI
Sbjct: 141 GKTNWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQYLQMNDLWVKHCGI 200
Query: 204 SHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPA 263
SHTGSFKDLGM+VLVSQVNRLRKMN+PV+GVGCASTGDTSAALSAYCA+AGIPSIVFLPA
Sbjct: 201 SHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCASAGIPSIVFLPA 260
Query: 264 DKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREITAELPIYLANSLNSLRLEGQKTAAI 323
DKISMAQLVQPIANGAFVLS+DTDFDGCM LIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 261 DKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLANSLNSLRLEGQKTAAI 320
Query: 324 EILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCAQAANANPLYLY 383
EILQQF+W+VPDWVI+PGGNLGNIYAFYKGF MCKELGLVD+IPRLVCAQAANANPLYL+
Sbjct: 321 EILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVCAQAANANPLYLH 380
Query: 384 YKSGWKE-FSPLKASTTFASAIQIGDPVSIDRAVFALKNSGGIVEEATEEELMDATAQAD 443
YKSG+KE F+PLKA+TTFASAIQIGDPVSIDRAV+ALK S GIVEEATEEELMDATA AD
Sbjct: 381 YKSGFKEDFNPLKANTTFASAIQIGDPVSIDRAVYALKKSNGIVEEATEEELMDATALAD 440
Query: 444 STGMFICPHTGVALTALIKLRNRGVIKGSDRTVVVSTAHGLKFTQSKIDYHSRAIQGMEC 503
STGMFICPHTGVALTAL+KLR GVI +DRTVVVSTAHGLKFTQSKIDYHS+ I+ M C
Sbjct: 441 STGMFICPHTGVALTALMKLRKSGVIGANDRTVVVSTAHGLKFTQSKIDYHSKNIKEMAC 500
Query: 504 RFANPPVEVKADFGAVMDVLKEHL 526
R ANPPV+VKA FG+VMDVLKE+L
Sbjct: 501 RLANPPVKVKAKFGSVMDVLKEYL 511
BLAST of CmaCh05G014140 vs. ExPASy Swiss-Prot
Match: Q58860 (Threonine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=thrC PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.6e-73 Identity = 160/423 (37.83%), Postives = 247/423 (58.39%), Query Frame = 0
Query: 102 YSLDEIVYRSQSGGLLDVQHNMEALKEFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVL 161
Y +DEI+Y + GGLL++ ++ E +K+ + + ++ K GVW E+ L
Sbjct: 12 YDVDEIIYTCECGGLLEIIYDYEEIKD-------KVSEEKLRKRE----IGVWRYLEY-L 71
Query: 162 PEIDSSDIVSAFEGNSNLFWAERFGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVN 221
P D S IVS EG + L+ KE LG+ +L+VK+ G + TGSFKD GMTV V++ N
Sbjct: 72 PVKDESKIVSLCEGGTPLYRCNNLEKE-LGIKELYVKNEGANPTGSFKDRGMTVGVTRAN 131
Query: 222 RLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPADKISMAQLVQPIANGAFVL 281
L V VGCASTG+TSA+L+AY A +G IV LP K+++ +L Q + GA V+
Sbjct: 132 EL-----GVEVVGCASTGNTSASLAAYSARSGKKCIVLLPEGKVALGKLAQAMFYGAKVI 191
Query: 282 SMDTDFDGCMKLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIIPGG 341
+ +FD + +++++ E IYL NS+N RLEGQKT A EI Q +W+VPD VI+P G
Sbjct: 192 QVKGNFDDALDMVKQLAKEKLIYLLNSINPFRLEGQKTIAFEICDQLNWQVPDRVIVPVG 251
Query: 342 NLGNIYAFYKGFQMCKELGLVDKIPRLVCAQAANANPLYLYYKSGWKEFSPLKASTTFAS 401
N GNI A +KGF+ + G++D++P++ QA A P+ ++ K+ P K T A+
Sbjct: 252 NAGNISAIWKGFKEFEITGIIDELPKMTGIQADGAKPIVEAFRKRAKDIIPYKNPETIAT 311
Query: 402 AIQIGDPVSIDRAVFALKNSGGIVEEATEEELMDA-TAQADSTGMFICPHTGVALTALIK 461
AI+IG+PV+ +A+ A+ +SGG E T+EE+++A A G+F+ P + ++ L K
Sbjct: 312 AIRIGNPVNAPKALDAIYSSGGYAEAVTDEEIVEAQKLLARKEGIFVEPASASSIAGLKK 371
Query: 462 LRNRGVIKGSDRTVVVSTAHGLKFTQSKIDYHSRAIQGMECRFANPPVEVKADFGAVMDV 521
L G+I +R V ++T HGLK + I R + P++++ D + +
Sbjct: 372 LLEEGIIDRDERIVCITTGHGLKDPDAAI------------RASEEPIKIECDMNVLKRI 404
Query: 522 LKE 524
LKE
Sbjct: 432 LKE 404
BLAST of CmaCh05G014140 vs. ExPASy Swiss-Prot
Match: Q8TQD4 (Threonine synthase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=thrC PE=1 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-65 Identity = 157/391 (40.15%), Postives = 230/391 (58.82%), Query Frame = 0
Query: 102 YSLDEIVYR-SQSGGLLDVQHNMEALKEFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWV 161
YS DE++Y S+ GLLDV ++ ++K D KT P VW K +
Sbjct: 13 YSRDEVIYTCSKCDGLLDVIYDYSSIK----------IDMEKLKTECP---SVW-KYAKL 72
Query: 162 LPEIDSSDIVSAFEGNSNLFWAERFGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQV 221
LP + V+ EG + L+ +R E +G+ L+VKH G++ TGSFKD GMTV V++
Sbjct: 73 LPV--EREPVTIQEGGTPLYKCDRLA-EKIGIKKLYVKHEGMNPTGSFKDRGMTVGVTKA 132
Query: 222 NRLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPADKISMAQLVQPIANGAFV 281
L MN V CASTG+TSAAL+ Y A AGIP +V LPA K+++ ++ Q + +GA V
Sbjct: 133 LEL-GMNT----VACASTGNTSAALAIYGAKAGIPVVVLLPAGKVALGKVAQALMHGAKV 192
Query: 282 LSMDTDFDGCMKLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIIPG 341
LS+ +FD + L+R + ++ IYL NS+N RLEGQKT EI Q D++VPD +++P
Sbjct: 193 LSIRGNFDDALALVRTLCSQEKIYLLNSINPYRLEGQKTIGFEIADQLDFKVPDRIVLPV 252
Query: 342 GNLGNIYAFYKGFQMCKELGLVDKIPRLVCAQAANANPLYLYYKSGWKEFSPLKASTTFA 401
GN GNI A YKGF+ K LG+ D +P++ QA + P+ KSG +P + T A
Sbjct: 253 GNAGNITAIYKGFREFKILGITDSLPKMTGIQAEGSCPIVKAIKSGAPAITPEENPETVA 312
Query: 402 SAIQIGDPVSIDRAVFALKNSGGIVEEATEEELMDATAQ-ADSTGMFICPHTGVALTALI 461
+AI+IG+PV+ +A+ A++ SGG E T+EE++ A A G+ + P + ++ L
Sbjct: 313 TAIRIGNPVNATKALSAIRESGGTAESVTDEEILAAQKDLARLEGIGVEPASAASVAGLR 372
Query: 462 KLRNRGVIKGSDRTVVVSTAHGLKFTQSKID 491
KL + GVI + V ++T H LK Q+ ID
Sbjct: 373 KLVDMGVIGRDETVVCITTGHLLKDPQTVID 381
BLAST of CmaCh05G014140 vs. TAIR 10
Match: AT4G29840.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein ) HSP 1 Score: 818.5 bits (2113), Expect = 3.1e-237 Identity = 413/524 (78.82%), Postives = 457/524 (87.21%), Query Frame = 0
Query: 3 SSLFSFN-TSLSPKPSSLFRRPLRRNSSPPFTIACPSATSDSTASPVLDSSLPLGVQNPQ 62
S LF+ + +SL+PK + P+RR+ S P S + + + + V+ P
Sbjct: 4 SCLFNASVSSLNPK-----QDPIRRHRSTSLLRHRPVVISCTADGNNIKAPIETAVKPPH 63
Query: 63 FACVDIQDDSHRSRSVAGDGGRNFSAKYVPFGSGFDSSEWYSLDEIVYRSQSGGLLDVQH 122
+I+D++ R+RS A + FSAKYVPF + S+E YSLDEIVYRS+SGGLLDV+H
Sbjct: 64 RTEDNIRDEARRNRSNAVN---PFSAKYVPFNAAPGSTESYSLDEIVYRSRSGGLLDVEH 123
Query: 123 NMEALKEFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSSDIVSAFEGNSNLFW 182
+MEALK FDGAYWR+LFDSRVGK+TWPYGSGVWSKKEWVLPEID DIVSAFEGNSNLFW
Sbjct: 124 DMEALKRFDGAYWRDLFDSRVGKSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFW 183
Query: 183 AERFGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDT 242
AERFGK+FLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM RPVVGVGCASTGDT
Sbjct: 184 AERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDT 243
Query: 243 SAALSAYCAAAGIPSIVFLPADKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREITAEL 302
SAALSAYCA+AGIPSIVFLPA+KISMAQLVQPIANGAFVLS+DTDFDGCMKLIREITAEL
Sbjct: 244 SAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAEL 303
Query: 303 PIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGL 362
PIYLANSLNSLRLEGQKTAAIEILQQFDW+VPDWVI+PGGNLGNIYAFYKGF+MC+ELGL
Sbjct: 304 PIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGL 363
Query: 363 VDKIPRLVCAQAANANPLYLYYKSGWKEFSPLKASTTFASAIQIGDPVSIDRAVFALKNS 422
VD+IPR+VCAQAANANPLYL+YKSGWK+F P+ ASTTFASAIQIGDPVSIDRAV+ALK
Sbjct: 364 VDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKC 423
Query: 423 GGIVEEATEEELMDATAQADSTGMFICPHTGVALTALIKLRNRGVIKGSDRTVVVSTAHG 482
GIVEEATEEELMDA AQADSTGMFICPHTGVALTAL KLRN+GVI +DRTVVVSTAHG
Sbjct: 424 NGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHG 483
Query: 483 LKFTQSKIDYHSRAIQGMECRFANPPVEVKADFGAVMDVLKEHL 526
LKFTQSKIDYHS AI M CRF+NPPV+VKADFGAVMDVLK +L
Sbjct: 484 LKFTQSKIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYL 519
BLAST of CmaCh05G014140 vs. TAIR 10
Match: AT1G72810.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein ) HSP 1 Score: 790.0 bits (2039), Expect = 1.2e-228 Identity = 398/504 (78.97%), Postives = 440/504 (87.30%), Query Frame = 0
Query: 24 LRRNSSPPFTIACPSATSDSTASPVLDSSLPLGVQNPQFA-CVDIQDDSHRSRSVAGDGG 83
L+ +S+ FT+ C S ASP + P Q P+ + +I+D++ R
Sbjct: 21 LKPHSAASFTVRCTS------ASPAVPPQTP---QKPRRSPDENIRDEARRRPHQL---- 80
Query: 84 RNFSAKYVPFGSGFDSSEWYSLDEIVYRSQSGGLLDVQHNMEALKEFDGAYWRNLFDSRV 143
+N SA+YVPF + S+E YSLDEIVYRSQSG LLDVQH+ ALK +DG +WRNLFDSRV
Sbjct: 81 QNLSARYVPFNAPPSSTESYSLDEIVYRSQSGALLDVQHDFAALKRYDGEFWRNLFDSRV 140
Query: 144 GKTTWPYGSGVWSKKEWVLPEIDSSDIVSAFEGNSNLFWAERFGKEFLGMNDLWVKHCGI 203
GKT WPYGSGVWSKKEWVLPEID DIVSAFEGNSNLFWAERFGK++L MNDLWVKHCGI
Sbjct: 141 GKTNWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQYLQMNDLWVKHCGI 200
Query: 204 SHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPA 263
SHTGSFKDLGM+VLVSQVNRLRKMN+PV+GVGCASTGDTSAALSAYCA+AGIPSIVFLPA
Sbjct: 201 SHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCASAGIPSIVFLPA 260
Query: 264 DKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREITAELPIYLANSLNSLRLEGQKTAAI 323
DKISMAQLVQPIANGAFVLS+DTDFDGCM LIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 261 DKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLANSLNSLRLEGQKTAAI 320
Query: 324 EILQQFDWEVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCAQAANANPLYLY 383
EILQQF+W+VPDWVI+PGGNLGNIYAFYKGF MCKELGLVD+IPRLVCAQAANANPLYL+
Sbjct: 321 EILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVCAQAANANPLYLH 380
Query: 384 YKSGWKE-FSPLKASTTFASAIQIGDPVSIDRAVFALKNSGGIVEEATEEELMDATAQAD 443
YKSG+KE F+PLKA+TTFASAIQIGDPVSIDRAV+ALK S GIVEEATEEELMDATA AD
Sbjct: 381 YKSGFKEDFNPLKANTTFASAIQIGDPVSIDRAVYALKKSNGIVEEATEEELMDATALAD 440
Query: 444 STGMFICPHTGVALTALIKLRNRGVIKGSDRTVVVSTAHGLKFTQSKIDYHSRAIQGMEC 503
STGMFICPHTGVALTAL+KLR GVI +DRTVVVSTAHGLKFTQSKIDYHS+ I+ M C
Sbjct: 441 STGMFICPHTGVALTALMKLRKSGVIGANDRTVVVSTAHGLKFTQSKIDYHSKNIKEMAC 500
Query: 504 RFANPPVEVKADFGAVMDVLKEHL 526
R ANPPV+VKA FG+VMDVLKE+L
Sbjct: 501 RLANPPVKVKAKFGSVMDVLKEYL 511
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9MT28 | 1.2e-238 | 85.99 | Threonine synthase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1 | [more] |
| Q9S7B5 | 4.3e-236 | 78.82 | Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS1 PE=1 ... | [more] |
| Q9SSP5 | 1.6e-227 | 78.97 | Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 ... | [more] |
| Q58860 | 1.6e-73 | 37.83 | Threonine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 266... | [more] |
| Q8TQD4 | 2.7e-65 | 40.15 | Threonine synthase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 /... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G29840.1 | 3.1e-237 | 78.82 | Pyridoxal-5'-phosphate-dependent enzyme family protein | [more] |
| AT1G72810.1 | 1.2e-228 | 78.97 | Pyridoxal-5'-phosphate-dependent enzyme family protein | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR036052 | Tryptophan synthase beta subunit-like PLP-dependent enzyme | GENE3D | 3.40.50.1100 | | coord: 160..486
e-value: 2.6E-107
score: 360.7 |
| IPR036052 | Tryptophan synthase beta subunit-like PLP-dependent enzyme | GENE3D | 3.40.50.1100 | | coord: 208..309
e-value: 2.6E-107
score: 360.7 |
| IPR036052 | Tryptophan synthase beta subunit-like PLP-dependent enzyme | SUPERFAMILY | 53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | coord: 101..525 |
| IPR004450 | Threonine synthase-like | TIGRFAM | TIGR00260 | TIGR00260 | coord: 159..485
e-value: 2.6E-61
score: 205.6 |
| IPR001926 | Pyridoxal-phosphate dependent enzyme | PFAM | PF00291 | PALP | coord: 172..478
e-value: 1.3E-48
score: 165.9 |
| None | No IPR available | PIRSR | PIRSR038945-1 | PIRSR038945-1 | coord: 152..469
e-value: 8.4E-71
score: 236.6 |
| None | No IPR available | PIRSR | PIRSR038945-2 | PIRSR038945-2 | coord: 152..469
e-value: 8.4E-71
score: 236.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..17 |
| None | No IPR available | PANTHER | PTHR10314 | CYSTATHIONINE BETA-SYNTHASE | coord: 35..527 |
| None | No IPR available | PANTHER | PTHR10314:SF176 | THREONINE SYNTHASE, CHLOROPLASTIC-LIKE ISOFORM X1 | coord: 35..527 |
| None | No IPR available | CDD | cd01563 | Thr-synth_1 | coord: 154..484
e-value: 3.23077E-148
score: 426.239 |
| IPR000634 | Serine/threonine dehydratase, pyridoxal-phosphate-binding site | PROSITE | PS00165 | DEHYDRATASE_SER_THR | coord: 199..213 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0019344 |
cysteine biosynthetic process |
| biological_process |
GO:0009088 |
threonine biosynthetic process |
| biological_process |
GO:0006520 |
cellular amino acid metabolic process |
| cellular_component |
GO:0005737 |
cytoplasm |
| molecular_function |
GO:0030170 |
pyridoxal phosphate binding |
| molecular_function |
GO:0004795 |
threonine synthase activity |
|
