CmaCh05G014130 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G014130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PHD finger protein ALFIN-LIKE 4-like
Location	Cma_Chr05: 10511813 .. 10519700 (+)
RNA-Seq Expression	CmaCh05G014130
Synteny	CmaCh05G014130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTCACGCGGGAGAGGAAGCGTGAGTGCCACGTGCGGAGGTCAGAAAGCAACGTGTAGAAGGGGCATGCAAGTAAGGGAGGAGTGCGCGTGGGCGTAGGTTACACAGTTAACGGCGGCTGGAAGAGCGAGAGTGAATAAGGCCAAAGATAGGGTAAGGACGTGTTTGGACGCGAGAGTGGGGCCAACGGAGAAAAAGACGTCAAATTGGAAAAAACCAGAAGGCGGAAGACCGACCGTGTCGCGGTGGGTGTGAAGAGAGAAAAATCACTCGCAGAGCCTACACACCCACCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCTGCCTCTGTTTTTTACAGGAGCAAATTCCGTCGCTCTCTTCCCCTGTTGCGATTCTCACAGACGAAGGACACAGAAATCTGTACGGTTGCAGAGCTTTAGTTTCTACCAAGTGGCTTTTGTGTGGGTTTTCTCGGCACAGGAGACATGTCCGACGACATCCCGACATCTTCCTTCTTTGTTGCTGCCTAGCTTCTCGCCAAACCGCTTTGTCGGTCTCTCTTAATGCCATCGCTACTGTTTACTTTCATCCCCTTCCCTGTTTCTCCTGTTCTTAGTATCGCCTTTTCTTCCAGTCCGTTATTGCTTCCGATGAACTGGATTCTCCATTATTTCGGGTTTAAAATCTTAGTTGCTCTCTTTTGTTTGCTGATTTTTGAATGCATGTGGAGTTTGAGATCACCGCGATGTTTGTTTTCTGATGCCTGAGCCAGGGCTGTTGTTGTTTGGTTTAAAGCCTCAGTTCTTGTCCTATTGCGGCCTTTTAGGTTCTGGATTTTGCTCATATTAATGCATTTTCCATTTCTGTTGGGCTGTTCTTCCCATTCATAGCTTCATCTGAATTGGATTTGCTAATAATTACTAGTTTTCAGTAGTTACCGCTGGTTTCGTTTCATTTCTTGGTGTTTTTTTTTTCTTCTTTCAACAAGTAATTTTCATTGTCAGATATTTATAAGTATGCTTACGTTCATCTTTCTCCCTTTTTAATGAGTGCCACTGAAGTTTCTTTACTGTTCCTTTGTTACCAAGCTTACTGTCTTGCGTTTGGATACTCAATCGATTAAGACTTGTTGTGCTTACTTGTTTCAACTACTGGCTATGTTATGCTTATTTGTAAAATGATGTGATGCTTGATCAGCCATGAAGAATGAATTAAATAGATGTGAACAATGTGTACACTGCTTTAATATCTTGTTTGGCCTTGATTTGTGGTCGCAGAGTTGTTGATGAACATGATGGCCATTCCACTCAAAAACTTTTCCCAGAAAAATCTTGATCAGGACTCTGTGCATTCAGTATTTCCATTTTCAGTTGATTGTACGCCGTGGCGGAACTCGAATGAACGGAAGATCCCATTGCCTTTATCTGATAATACAACTCTTAAACTTGAAACACCTCCACAGCATCATCACAAGCATTTGGGCTTTCAGTTACCAGATCAGGAGTCATCTACAGCCCATTCAATTGGTCAATCTCTGCATAAAGTGTGTACTATGGAGGTGCAAAATGCTCAAGAGCAATGCATTTCTTCTGAATCTGGTACTTGCATGCTTAGATTCCTCTGTTTATTTGTTGTTCATTATACATTTGTTTGATTATTAGTAGTGTGGCTCAGCTCAACACTGATAACAATATCAGAAATTGAGGAAAATGGGAATATGTGGTTTACTTGGTATAGTACTGCGGAAGCTAAGGCACTCAACTTTAACTATGTTGATTGCCTCTACCGCTTGGCACCCTTAAGAGTCTCAGTTAAAGAGCTGGTAGATGATCTGCCGAAGGGCTAATGTAACGACCCAATCCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGATTCTTAAAACGCGTTTGCTAGGGAGAGGTTTTCACACTCTTATAAAAGAATGCTTCGTTCTCCTCCCCAATCGATGTGGGATCTCATAATCCACCCCCTTCGGGGCCCAACATCCTCGCTAGTACTCGTTCCCTTCTCCAATCAATGTGGGACCCTCCCAATCCACCCTCCGAGGCCCAACATCCTTGCTAGCACACTACCTCGTGTCCACCCCTTTCGGGCCTCAGCCTCCTCACTGGCACATTACCTGGTGTCTGACTCTGACATCAACTGTAACAGTCTAAGCCCACTGTAGCAGATATTGTATTCTTTGGGCTTTTCCTTTCAAGCTTCCCCTCGAGGTTTTTGAAAAGCATCTGCTACGGAGAAGTTTTCACACCCTTATAAAGAATGCTTCGTTTTCCTTCTTAACCGATGTGGGATCTCACAGCTAATACAAACTATTTGTACTCCTCAAATTTGTTCTATTTTATTTCTACTACTGCTGAAGGATATTAAAATTATGAAGGATATTTTCTGCCGTAAAAATTGTTCTGCCTACTAATTTCTCGTTATCTTTTATGTTTTCGACGTTTTATCCAACCTTTAGTTATTCTTCGTGCTTCAGGTCAAGAGGAAAATTGTGGCGAGAGTGTGGAGAATCAGATGAAACCAGTTATTTTGTTTAGCAACCCTGAATTTATGTTCAGTACTCCCCAAGTTGATGGCAGCCAGCCAATGGTAGGTTGAATTTTGTTATTTGATTTCCGTTTCTGATTTGTTGCTAGGCTAATAATCTCTGTTTCTCTCGATTTCAGACTCGAGTATCATACCCATACATTGATCCTTACTATGGGGGGCTATTGTGCAGTGCCTACACTCAGCAGGCTATTAATGTAAGTTTCGTACATCGATCCTTTGAACTTTTTACATTGCAAGTCGATTAATACACCCGAGCTGTCTGCATTTTATCTTCTCTTATGTGGTTCTTGATTGATGTCAATGATTTGAATCTCATAAGAATCAAGCTCAAGTAAATACCAATGTTGTTGGGATGGCACCTGCACGAGTCCCCATTCCGCACGCTCTTGCTGAAGATGGGCCCATCTATGTCAATGCCAAACAATACCATGGAATTCTTAGAAGGAGGCAGTCTCGGGCAAAGCTCGAGTCTCAAAACAGAGTCATAAGAAACCGAAAGGTATCCCTTGTGAATTTTACTCCCTTTTTCAGTTGATTTTGGACACTTCCATCAATAATCAATTGGAATGGAATCCTTAAACAGTTAAATATGTTTCAATGAGAAGAACTCGAACTCGGGAACTTGGCAAGCTTTAAGAAAATGCTGTAGTGTATTTGTTTGTGAAGTTTATATGAATGATCTGATCCTTCCTTTCAATTCTCTACTAGACAATAATACCATTTCACTTATGCAGCCGTATCTCCACGAGTCTCGACATCTTCATGCGCTGAACAGAGTGAGGGGATCTGGTGGACGCTTTCTCAGCTCAAAAAAGAATCAATCACCTGTTCAATCAACTCCTTCGACCACCTTGAGCCAACAGATGAATACACCAGACTTCAATACATGTAGCTCTGAAACGAGCGACCGTGGCATGAGCTCTGAGATCACGAGTATCTCTAATGGTTCAGTGAGGTTCGGGCGGTCGGACAGTCAGCTCTCCGCTCTCTCTTCCAGGATGGGTGGAAGCATGGAGCAGTATAGCGGAGACTTAATGCGTGGTGGAAGATAGAACCGTGTTATTAAACTAGAAGACAGGCAAATCATCCTTGGCTTTGTTAGTTATTTATGCTTTGTGATTTCAGTTCGGAATGAGCAGAAACAAACCAACAGTAATGTACTATTGAAAACGTTGGCATGATGCCCTTCAATAATTTGCTTGTGTTTAAAACAAACCATCTTTTAGAAGCAGGTGACAATGGTTTTGGGCTTACGTGGATTTGTTTGTAATGACAATATGGCAAGGGTATTTTTGTAATTTCGACAGTGTTTTGCCTTATTTGGAATTTCATATTCTGCGTTAATTGGCTGACACGTGTACGGAAAGTACTTGATATTACCCTTTATTTACAGTCGTTTTGACTTGGCGGCATTTCTCGCCATAGAACCAAATTTTAAAAATTGATTTATAAATACGCCAGCCAATCAGAACTTGCCACGTCAATGGATTTGAAGAAGCAACAAATCTCAGCTCGCGCTAATGCATGGTGTATCTTTGCCGCCGGTGTTTAGAAAAAGCTAAAATGAAATTATTAATTGTTTATTCGATTTAATTTATTTTAATTTTAATTTTAATTTTTTGTTCCCTCTCCTTTGAGAGAGAGAAAGAGCCGCCCAATCTTCAAAACCGCAACTGTAAGAACTCTCTCCTGCTACTGGATTTTCTTGGGCGTTCGGTTTTGATTTCTTGGCGCCTTTCTTCTCCATTGGTAATCAACCATTGCAGAAGTGCCTTTCTTGTTCTTCTTATGCTTTTCACTCTCCGTTTCTTCTTTCTTCCGTTTTCGATTTCCATAACCATTTCTCGCTGTTTGTTTCTTCTTTTCTGAATTCAGCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTCTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGGTCTTGTTCAATCTCACTTTTCCTTCTCCTCCTCATCTATTTCTGTCTTTTTGTTTTTAATTTTTAAGGTTCTTCTACAAGGCTTTCATGGCGCTCTACATTTCTAGCTAATTACTCTTCTCTCTTGCCATCTTTTTGCAGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGGTCTGAGCTCCATTCTTTGTATTCTTTCTATTTTACATAACTTGTGGGTTTTCGTTTACTTGCAATTGCGGTTTGATAGTCAACACTGTACTTTGTGTGTGTTAATTAATATTCTTTTGAGATCTTCTCTGTGGGTTATTCTCTTGATTCGTGAATTTTTGGTAATGAAAAAACACGGTTACTTAATACTACTGATAGTGAGAGCCTCTAATTTGGTGAGATTTCAAAGAGCCACCTACTTCACACACACACACACACACACACATTGTAGCTGGAATCTGTGTTTTACCAGCTTTTTTATTTGTTATTTTCTTGGCAACATATTTAAAGACGTGAAATGTGAATGATACTTTAAATTTTGTTTGTAATCTCCAACTGTAGTTTCGAAGCTGGAATGTAGTAAGTTATTTTTATTGGAACTTCATTAGCTGAAGTTGGTAACATAAATACGTGCTTAGCTATGAATTTTCTTCGTACTTTCTGTTCTTGGCCACTCGAAGAATAAATGCAGTAAACATTGGGGACCCAATTACCTTTTTTAATAGCACTCCATGTAGCTATTTCTGCTTTTACGGACATCAGTGAACTTTTCAACTATTTACACAGCTGTTTCAAATTTCAGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCACAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGTACTTTCTGAACTAAATTTCCTGGCTGTCGCTGCCGCTGGGGCACCACAGTTACTTGTTACTACGTGTATGGCTTCGGTTATGAAAATACAAAAGTTGTCGCTGATATTTAAAAGGAAAAGGAAAACAAATTATTAGTTGTGCAGAGCGGTACTCTGACGTCTGGCATATCTCTTTATTAATTATGCATCTACCCGTTCTTTGAAGACTTCACAATATGGAGACTGACTGATGGGTCATTAATCTTTATGTGTATAAGTGTTGCATTTTAACTGATAAATTTGGGTTGAATTGGTAAGATTATGAAGGCTTAAGTAAATCCTGTGTTTCTCTTGCAAAAAGACTCAAATTCATGCATTTTGTTTCTCGAAGTGATCATTTTCTCTTGTTCATATCATTATTTGCTAATTTTGTAGAATTGATTCATGATTCAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGGTAAAAAGAATTTTCTGTATCTTATTTCATTTTCATTCGTGAACAATAAAATATGTCTCAATTGAGTTGATTGATGAAGAATTTTGGACCTTAGTGCTCGCAATCAGATAGTTTTGTACCCTATGCAATTGTTCTCACTTCAAGAACAGTAAACAGAATATAAGAGAAATTTACAAAGGAAAAAGAAAAGTTGAGAAAATATCTGGACTTGCTTCAATATTAGTTTCAGAAGCAAGGCATTGATGTGCACATTATTTATTTTGAAAACGAAGTCTTTGAATTTCAATGCATTACTCCTGATGGATTTGTCTACAGCTCTATATGTCCAGTCGGTTTTCGTTCTATATATGATCTTTTGACTGTATAGCATTTGTTTAACTAATTTTTTTAACAAAATTAACATTATTAACAGAGAGACTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGATGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGATAATGATGGGTACCTCGTTAATTTTATTCATGTTGGATTAAGCTAACTTGTAGTCAGTCCAATATTAATCCATGTCCCCCCAGGGTATGTACTAATTGCGTTGGCTGGAATCTTGTTTATTCGGATAACTTACAGGCTATTAAATGTATTCTATGTAATTCCCAACTGAGATACACAGATTGTTCTATATGTGCGGACCTGTCGGCTATGGAATCTGAAACACTATAATTTATCTTATTTAATTGTTTCTGATCTGCTTCTTATCCTGGGATTCAGAACATAAAAGTCGTTCTCACTTCCGAGGTATGTTAACTCTACTCTGGTTTTCTGCTGGTCGCTGCCTGAAAGAAGGTAATTCATTTCCTTCTTCCACCCTTAAACTCTAATGTGCAAATTGTGAAGGTTTGAGTGTGTTTGGACGAGGATTTAAAGATGCTTTCTGGTGATCTGACTATCGTTCAAGGCAATAGCACAGGTGAAAAAGGCACTGTTGTATGCTGTGAATTTTATAACCTTGCCCTGCGCAAAGATGTTTGAGATTCTGGTTTGTTAGTCTTCGGTAATCATATCTGCAGTAGATGGAGCTGGCGTGCTATGCATTCATGGCGGAAGTATGAGAACTGAGAATGGCAAACGCTAATTCCTCGGTGGTTGATGCAACATCACGTGAAACCAGGTCCAGAACAATGCACAACCAAACCCTTGTTTTGGTTATGTAAGTTTACAACTCTCGGAAATGAAGTTTCCTCTAATGCTGAATTCTAGTTAAGGTTGTAAAACACAACAGTTTTTCATCTTTACCGATGATGGGAATGCAATTCAAATCTAAACAAGCCTTTTTATTTATTGTGGTATATACATTTACTTCCTAACCAATCACTCTTACAGAGTTTGCCCTGTTATAGTTTGCCCCGAAGGTAGTAATTCAAGCTACTTGGCATTTGATGGATGGGGGAACTGGTAGCTGAGAAGCACGTTAAATACACCATGTCTGTTGAAAAGGTGTGTTTTTCATTCATATATCA

mRNA sequence

ATGCCTCTCACGCGGGAGAGGAAGCGTGAGTGCCACGTGCGGAGGTCAGAAAGCAACTTAACGGCGGCTGGAAGAGCGAGAGTGAATAAGGCCAAAGATAGGGTAAGGACGTGTTTGGACGCGAGAGTGGGGCCAACGGAGAAAAAGACGTCAAATTGGAAAAAACCAGAAGGCGGAAGACCGACCGTGTCGCGGTGGGAGCAAATTCCGTCGCTCTCTTCCCCTGTTGCGATTCTCACAGACGAAGGACACAGAAATCTGTACGAGTTGTTGATGAACATGATGGCCATTCCACTCAAAAACTTTTCCCAGAAAAATCTTGATCAGGACTCTGTGCATTCAGTATTTCCATTTTCAGTTGATTGTACGCCGTGGCGGAACTCGAATGAACGGAAGATCCCATTGCCTTTATCTGATAATACAACTCTTAAACTTGAAACACCTCCACAGCATCATCACAAGCATTTGGGCTTTCAGTTACCAGATCAGGAGTCATCTACAGCCCATTCAATTGGTCAATCTCTGCATAAAGTGTGTACTATGGAGGTGCAAAATGCTCAAGAGCAATGCATTTCTTCTGAATCTGGTCAAGAGGAAAATTGTGGCGAGAGTGTGGAGAATCAGATGAAACCAGTTATTTTGTTTAGCAACCCTGAATTTATGTTCAGTACTCCCCAAGTTGATGGCAGCCAGCCAATGACTCGAGTATCATACCCATACATTGATCCTTACTATGGGGGGCTATTGTGCAGTGCCTACACTCAGCAGGCTATTAATAATCAAGCTCAAGTAAATACCAATGTTGTTGGGATGGCACCTGCACGAGTCCCCATTCCGCACGCTCTTGCTGAAGATGGGCCCATCTATGTCAATGCCAAACAATACCATGGAATTCTTAGAAGGAGGCAGTCTCGGGCAAAGCTCGAGTCTCAAAACAGAGTCATAAGAAACCGAAAGCCGTATCTCCACGAGTCTCGACATCTTCATGCGCTGAACAGAGTGAGGGGATCTGGTGGACGCTTTCTCAGCTCAAAAAAGAATCAATCACCTGTTCAATCAACTCCTTCGACCACCTTGAGCCAACAGATGAATACACCAGACTTCAATACATGTAGCTCTGAAACGAGCGACCGTGGCATGAGCTCTGAGATCACGAGTATCTCTAATGGTTCAGTGAGGTTCGGGCGGTCGGACAGTCAGCTCTCCGCTCTCTCTTCCAGGATGGGTGGAAGCATGGAGCAGTATAGCGGAGACTTAATGCGTGTTCGGAATGAGCAGAAACAAACCAACAGTAATCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTCTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCACAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGAGAGACTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGATGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGATAATGATGGGTACCTCGTTAATTTTATTCATGTTGGATTAAGCTAACTTGTAGTCAGTCCAATATTAATCCATGTCCCCCCAGGGTATGTACTAATTGCGTTGGCTGGAATCTTGTTTATTCGGATAACTTACAGGCTATTAAATGTATTCTATGTAATTCCCAACTGAGATACACAGATTGTTCTATATGTGCGGACCTGTCGGCTATGGAATCTGAAACACTATAATTTATCTTATTTAATTGTTTCTGATCTGCTTCTTATCCTGGGATTCAGAACATAAAAGTCGTTCTCACTTCCGAGGTATGTTAACTCTACTCTGGTTTTCTGCTGGTCGCTGCCTGAAAGAAGGTAATTCATTTCCTTCTTCCACCCTTAAACTCTAATGTGCAAATTGTGAAGGTTTGAGTGTGTTTGGACGAGGATTTAAAGATGCTTTCTGGTGATCTGACTATCGTTCAAGGCAATAGCACAGGTGAAAAAGGCACTGTTGTATGCTGTGAATTTTATAACCTTGCCCTGCGCAAAGATGTTTGAGATTCTGGTTTGTTAGTCTTCGGTAATCATATCTGCAGTAGATGGAGCTGGCGTGCTATGCATTCATGGCGGAAGTATGAGAACTGAGAATGGCAAACGCTAATTCCTCGGTGGTTGATGCAACATCACGTGAAACCAGGTCCAGAACAATGCACAACCAAACCCTTGTTTTGGTTATTTTGCCCCGAAGGTAGTAATTCAAGCTACTTGGCATTTGATGGATGGGGGAACTGGTAGCTGAGAAGCACGTTAAATACACCATGTCTGTTGAAAAGGTGTGTTTTTCATTCATATATCA

Coding sequence (CDS)

ATGCCTCTCACGCGGGAGAGGAAGCGTGAGTGCCACGTGCGGAGGTCAGAAAGCAACTTAACGGCGGCTGGAAGAGCGAGAGTGAATAAGGCCAAAGATAGGGTAAGGACGTGTTTGGACGCGAGAGTGGGGCCAACGGAGAAAAAGACGTCAAATTGGAAAAAACCAGAAGGCGGAAGACCGACCGTGTCGCGGTGGGAGCAAATTCCGTCGCTCTCTTCCCCTGTTGCGATTCTCACAGACGAAGGACACAGAAATCTGTACGAGTTGTTGATGAACATGATGGCCATTCCACTCAAAAACTTTTCCCAGAAAAATCTTGATCAGGACTCTGTGCATTCAGTATTTCCATTTTCAGTTGATTGTACGCCGTGGCGGAACTCGAATGAACGGAAGATCCCATTGCCTTTATCTGATAATACAACTCTTAAACTTGAAACACCTCCACAGCATCATCACAAGCATTTGGGCTTTCAGTTACCAGATCAGGAGTCATCTACAGCCCATTCAATTGGTCAATCTCTGCATAAAGTGTGTACTATGGAGGTGCAAAATGCTCAAGAGCAATGCATTTCTTCTGAATCTGGTCAAGAGGAAAATTGTGGCGAGAGTGTGGAGAATCAGATGAAACCAGTTATTTTGTTTAGCAACCCTGAATTTATGTTCAGTACTCCCCAAGTTGATGGCAGCCAGCCAATGACTCGAGTATCATACCCATACATTGATCCTTACTATGGGGGGCTATTGTGCAGTGCCTACACTCAGCAGGCTATTAATAATCAAGCTCAAGTAAATACCAATGTTGTTGGGATGGCACCTGCACGAGTCCCCATTCCGCACGCTCTTGCTGAAGATGGGCCCATCTATGTCAATGCCAAACAATACCATGGAATTCTTAGAAGGAGGCAGTCTCGGGCAAAGCTCGAGTCTCAAAACAGAGTCATAAGAAACCGAAAGCCGTATCTCCACGAGTCTCGACATCTTCATGCGCTGAACAGAGTGAGGGGATCTGGTGGACGCTTTCTCAGCTCAAAAAAGAATCAATCACCTGTTCAATCAACTCCTTCGACCACCTTGAGCCAACAGATGAATACACCAGACTTCAATACATGTAGCTCTGAAACGAGCGACCGTGGCATGAGCTCTGAGATCACGAGTATCTCTAATGGTTCAGTGAGGTTCGGGCGGTCGGACAGTCAGCTCTCCGCTCTCTCTTCCAGGATGGGTGGAAGCATGGAGCAGTATAGCGGAGACTTAATGCGTGTTCGGAATGAGCAGAAACAAACCAACAGTAATCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTCTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCACAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGAGAGACTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGATGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGA

Protein sequence

MPLTRERKRECHVRRSESNLTAAGRARVNKAKDRVRTCLDARVGPTEKKTSNWKKPEGGRPTVSRWEQIPSLSSPVAILTDEGHRNLYELLMNMMAIPLKNFSQKNLDQDSVHSVFPFSVDCTPWRNSNERKIPLPLSDNTTLKLETPPQHHHKHLGFQLPDQESSTAHSIGQSLHKVCTMEVQNAQEQCISSESGQEENCGESVENQMKPVILFSNPEFMFSTPQVDGSQPMTRVSYPYIDPYYGGLLCSAYTQQAINNQAQVNTNVVGMAPARVPIPHALAEDGPIYVNAKQYHGILRRRQSRAKLESQNRVIRNRKPYLHESRHLHALNRVRGSGGRFLSSKKNQSPVQSTPSTTLSQQMNTPDFNTCSSETSDRGMSSEITSISNGSVRFGRSDSQLSALSSRMGGSMEQYSGDLMRVRNEQKQTNSNRTWIPENMDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEVNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP

Homology

[Close]

BLAST of CmaCh05G014130 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 416.0 bits (1068), Expect = 8.3e-115
Identity = 198/254 (77.95%), Postives = 220/254 (86.61%), Query Frame = 0


Query: 440 MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 499
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTTDV EF++LCDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 500 NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 559
           NLPAEEVPPE+PEP LGINFARDGM +KDWLSLVAVHSDAWLLAVAF+FG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 560 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 619
           KRLF M+NDLPTIFEVV G+ KKQGKDKS VSNNSS++S++  K      +K S    KD
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 620 ----EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 679
               E+EG+ EE E+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 680 KQYKCPSCSNKRAR 690
           KQYKCPSCSNKRAR
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of CmaCh05G014130 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.5e-108
Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 0


Query: 440 MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 499
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDV +F+Q CDPEK+NLCLYG PNE WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 500 VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 559
           VNLPAEEVPPE+PEPALGINFARDGMQ+++WLSLVAVHSDAWLL+V+FYFGSRFG D++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 560 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 619
           RKRLF+MIN++PT++EVVTG+ +KQ K+    +N + ++S++  K R  ES       AK
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180

Query: 620 DEDEGL--------NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPA 679
           DE+EGL         +E E+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240

Query: 680 RAEHIKQYKCPSCSNKRARP 691
           RAEHIK YKCP+CSNKRARP
Sbjct: 241 RAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of CmaCh05G014130 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.9e-107
Identity = 183/251 (72.91%), Postives = 213/251 (84.86%), Query Frame = 0


Query: 440 MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 499
           M+GG A YNPRTVEEVF+DFKGRR  +++ALTTDV EFYQ CDPEKENLCLYGLPNE+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 500 VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 559
           VNLPAEEVPPE+PEPALGINFARDG+ +K+WLSLVA+HSDAWLL+V+FYFGSRF   K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 560 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 619
           RKRLF MIND+PTIFEVVTG  K   KDKS  +N + +KS++  K R SE         K
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 620 DEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 679
           +EDE ++E+ E++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 680 KCPSCSNKRAR 690
           KCPSCSNKRAR
Sbjct: 241 KCPSCSNKRAR 249

[Close]

BLAST of CmaCh05G014130 vs. ExPASy Swiss-Prot
Match: Q8S8M9 (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=AL6 PE=1 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.2e-101
Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 0


Query: 440 MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 499
           M+G     PRTVEEVF DF+GRRAG+I+ALT D+V+FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 500 NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 559
           NLP EEVPPE+PEPALGINFARDGMQ+KDW+SLVAVHSD+WLL+VAFYFG+RFG  K++R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 560 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSES----SKLSNG 619
           KRLF MIN+LPTIFEVV+G+  KQ KD S+ +NNS SK  +G K R SES    +K+S+ 
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKP-SGVKSRQSESLSKVAKMSSP 180

Query: 620 LAKDEDEGLNE---EAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARA 679
             K+E+E  +E   E+E++    +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+A
Sbjct: 181 PPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKA 240

Query: 680 EHIKQYKCPSCSNKRARP 691
           EHIK YKCP+CSNKRARP
Sbjct: 241 EHIKHYKCPTCSNKRARP 256

[Close]

BLAST of CmaCh05G014130 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-100
Identity = 180/255 (70.59%), Postives = 207/255 (81.18%), Query Frame = 0


Query: 440 MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 499
           MDGG A+  RT E+VFRDF+ RRAGMI+ALTTDV +FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MDGGGAH--RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEV 60

Query: 500 NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 559
           NLPAEEVPPE+PEPALGINFARDGM +KDWLSLVAVHSD WLLAVAFYFG+RFG DK  R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESR 120

Query: 560 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGR---DSESSKLSNGL 619
           KRLF+MIN+LPTI+EVVTG+ KKQ K+K+  ++  S+KS T P  +   +S   K+    
Sbjct: 121 KRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPK 180

Query: 620 AKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 679
            +D+  G  EE EE+H  TLCGACG+NY  DEFWICCD CE WFHGKCVKITPA+AEHIK
Sbjct: 181 DEDDSGGEEEEEEEDHENTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIK 240

Query: 680 QYKCPSC--SNKRAR 690
            YKCP+C  S+KRAR
Sbjct: 241 HYKCPNCSSSSKRAR 253

[Close]

BLAST of CmaCh05G014130 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 416.0 bits (1068), Expect = 5.9e-116
Identity = 198/254 (77.95%), Postives = 220/254 (86.61%), Query Frame = 0


Query: 440 MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 499
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTTDV EF++LCDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 500 NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 559
           NLPAEEVPPE+PEP LGINFARDGM +KDWLSLVAVHSDAWLLAVAF+FG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 560 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 619
           KRLF M+NDLPTIFEVV G+ KKQGKDKS VSNNSS++S++  K      +K S    KD
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 620 ----EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 679
               E+EG+ EE E+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 680 KQYKCPSCSNKRAR 690
           KQYKCPSCSNKRAR
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of CmaCh05G014130 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-109
Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 0


Query: 440 MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 499
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDV +F+Q CDPEK+NLCLYG PNE WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 500 VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 559
           VNLPAEEVPPE+PEPALGINFARDGMQ+++WLSLVAVHSDAWLL+V+FYFGSRFG D++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 560 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 619
           RKRLF+MIN++PT++EVVTG+ +KQ K+    +N + ++S++  K R  ES       AK
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180

Query: 620 DEDEGL--------NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPA 679
           DE+EGL         +E E+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240

Query: 680 RAEHIKQYKCPSCSNKRARP 691
           RAEHIK YKCP+CSNKRARP
Sbjct: 241 RAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of CmaCh05G014130 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 391.0 bits (1003), Expect = 2.0e-108
Identity = 183/251 (72.91%), Postives = 213/251 (84.86%), Query Frame = 0


Query: 440 MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 499
           M+GG A YNPRTVEEVF+DFKGRR  +++ALTTDV EFYQ CDPEKENLCLYGLPNE+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 500 VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 559
           VNLPAEEVPPE+PEPALGINFARDG+ +K+WLSLVA+HSDAWLL+V+FYFGSRF   K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 560 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 619
           RKRLF MIND+PTIFEVVTG  K   KDKS  +N + +KS++  K R SE         K
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 620 DEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 679
           +EDE ++E+ E++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 680 KCPSCSNKRAR 690
           KCPSCSNKRAR
Sbjct: 241 KCPSCSNKRAR 249

[Close]

BLAST of CmaCh05G014130 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 370.2 bits (949), Expect = 3.7e-102
Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 0


Query: 440 MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 499
           M+G     PRTVEEVF DF+GRRAG+I+ALT D+V+FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 500 NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 559
           NLP EEVPPE+PEPALGINFARDGMQ+KDW+SLVAVHSD+WLL+VAFYFG+RFG  K++R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 560 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSES----SKLSNG 619
           KRLF MIN+LPTIFEVV+G+  KQ KD S+ +NNS SK  +G K R SES    +K+S+ 
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKP-SGVKSRQSESLSKVAKMSSP 180

Query: 620 LAKDEDEGLNE---EAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARA 679
             K+E+E  +E   E+E++    +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+A
Sbjct: 181 PPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKA 240

Query: 680 EHIKQYKCPSCSNKRARP 691
           EHIK YKCP+CSNKRARP
Sbjct: 241 EHIKHYKCPTCSNKRARP 256

[Close]

BLAST of CmaCh05G014130 vs. TAIR 10
Match: AT2G02470.2 (alfin-like 6 )

HSP 1 Score: 364.4 bits (934), Expect = 2.0e-100
Identity = 177/254 (69.69%), Postives = 211/254 (83.07%), Query Frame = 0


Query: 440 MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 499
           M+G     PRTVEEVF DF+GRRAG+I+ALT D+V+FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 500 NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 559
           NLP EEVPPE+PEPALGINFARDGMQ+KDW+SLVAVHSD+WLL+VAFYFG+RFG  K++R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 560 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 619
           KRLF MIN+LPTIFEVV+G+  KQ KD S+ +NNS SK    P G   + +K+S+   K+
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSK----PSG--VKVAKMSSPPPKE 180

Query: 620 EDEGLNE---EAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 679
           E+E  +E   E+E++    +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+AEHIK
Sbjct: 181 EEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIK 240

Query: 680 QYKCPSCSNKRARP 691
            YKCP+CSNKRARP
Sbjct: 241 HYKCPTCSNKRARP 247

The following BLAST results are available for this feature:

BLAST of CmaCh05G014130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81488	8.3e-115	77.95	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2	[more]
Q5XEM9	1.5e-108	71.54	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1	[more]
Q9M2B4	2.9e-107	72.91	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
Q8S8M9	5.2e-101	70.16	PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=AL6 PE=1 SV=1	[more]
B8BJV8	1.2e-100	70.59	PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35...	[more]

BLAST of CmaCh05G014130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26210.1	5.9e-116	77.95	alfin-like 4	[more]
AT5G20510.1	1.1e-109	71.54	alfin-like 5	[more]
AT3G42790.1	2.0e-108	72.91	alfin-like 3	[more]
AT2G02470.1	3.7e-102	70.16	alfin-like 6	[more]
AT2G02470.2	2.0e-100	69.69	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 318..341 score: 76.62 coord: 287..309 score: 78.99
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 283..344 e-value: 9.9E-36 score: 134.7
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 287..341 e-value: 6.5E-26 score: 90.7
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 284..344 score: 36.461639
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 636..684 e-value: 2.1E-9 score: 47.2
None	No IPR available	GENE3D	6.10.250.2430		coord: 284..346 e-value: 4.3E-30 score: 106.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 584..600
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 584..628
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 601..621
None	No IPR available	PANTHER	PTHR12321:SF141	PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1	coord: 442..690
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 637..685 e-value: 7.5E-10 score: 38.6
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 634..686 score: 9.5256
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 627..685 e-value: 1.0E-25 score: 90.9
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 450..578 e-value: 1.6E-66 score: 221.9
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 442..690
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 637..683
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 289..309
IPR044104	Alfin1-like, PHD finger	CDD	cd15613	PHD_AL_plant	coord: 636..686 e-value: 6.06894E-33 score: 118.752
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 627..687

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G014130.1	CmaCh05G014130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding