CmaCh05G013850 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G013850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Inositol oxygenase
Location	Cma_Chr05: 10371035 .. 10371544 (-)
RNA-Seq Expression	CmaCh05G013850
Synteny	CmaCh05G013850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGAAAAAACGGAGAAGATAAAAAGGCAGAACCAAAAGCAGAAATATGAGAAAATAAAACACCCAAATTTGAGGCTAAACCCGAAGCCACGAAGCCACCCGAACTTCAGCTTCCGGTTCATTCCTGACGCCAGGTTAGGAGGCCAATTCGGCGGCGGAGACAGCACGCGCAAGGATTCTCCACAATGAACAGGTGGTTCATTGAGCCTTTCAGGAAGTTTGCGGCGGCCGGCGGACGGCGGTGCTTGCTCAAGGATGCTCATTGCGACTTCACTCAAGGCGTTTCCGATGAGTTTAAGACGCGGAGAGCCGTTCCGAGGACGGCCAATGTTTCTGCATTTATGGCCATGCTCGGCCTTCCTCCCATGCGTCCCAACCCCCTCTTACCTTCCTCAGGTTCCCTACTTCCACCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTAAGGATAAAACGGTAATTTACCATCAACTAACATACCAACTTGAACTCTTAATATAA

mRNA sequence

ATGGAAGAGGAAAAAACGGAGAAGATAAAAAGGCAGAACCAAAAGCAGAAATATGAGAAAATAAAACACCCAAATTTGAGGCTAAACCCGAAGCCACGAAGCCACCCGAACTTCAGCTTCCGGTTCATTCCTGACGCCAGGAGGCCAATTCGGCGGCGGAGACAGCACGCGCAAGGATTCTCCACAATGAACAGGTGGTTCATTGAGCCTTTCAGGAAGTTTGCGGCGGCCGGCGGACGGCGGTGCTTGCTCAAGGATGCTCATTGCGACTTCACTCAAGGCGTTTCCGATGAGTTTAAGACGCGGAGAGCCGTTCCGAGGACGGCCAATGATAAAACGGTAATTTACCATCAACTAACATACCAACTTGAACTCTTAATATAA

Coding sequence (CDS)

ATGGAAGAGGAAAAAACGGAGAAGATAAAAAGGCAGAACCAAAAGCAGAAATATGAGAAAATAAAACACCCAAATTTGAGGCTAAACCCGAAGCCACGAAGCCACCCGAACTTCAGCTTCCGGTTCATTCCTGACGCCAGGAGGCCAATTCGGCGGCGGAGACAGCACGCGCAAGGATTCTCCACAATGAACAGGTGGTTCATTGAGCCTTTCAGGAAGTTTGCGGCGGCCGGCGGACGGCGGTGCTTGCTCAAGGATGCTCATTGCGACTTCACTCAAGGCGTTTCCGATGAGTTTAAGACGCGGAGAGCCGTTCCGAGGACGGCCAATGATAAAACGGTAATTTACCATCAACTAACATACCAACTTGAACTCTTAATATAA

Protein sequence

MEEEKTEKIKRQNQKQKYEKIKHPNLRLNPKPRSHPNFSFRFIPDARRPIRRRRQHAQGFSTMNRWFIEPFRKFAAAGGRRCLLKDAHCDFTQGVSDEFKTRRAVPRTANDKTVIYHQLTYQLELLI

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh05G013850 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh05G013850 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G013850.1	CmaCh05G013850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019310	inositol catabolic process
biological_process	GO:0019853	L-ascorbic acid biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0050113	inositol oxygenase activity
molecular_function	GO:0005506	iron ion binding