Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTTGGGTTTTTTTCTGTCTGTTATTAAGTGGTCTAGTTCTCCCCACCCGAGCCATTGTTGGAGTCGGCGGCGGAGTTCGTTTTGGCTTTGGCGGTGGCGGAGGAGGTATTTGGGTTGGCGGAGGAGGAAACACTCCGACTCCGACTCCAAATCCATTGTTAGGGACTCAACTAAACAGAGCATACTCTGTTCTTCAGACATGGAAATCTGCCATTTCCGACGACCCCACCGGAATTTTAACCACATGGGTCGGCTCAGATGTATGTTCTTACCAAGGAATCTTCTGTACAAATCATAGTTCCGGCCAAATATCCGTCACCGGAATCGACCTCAACGGCAAGAATCTCAGAGGAAACCTCATCAAGGATCTGGCCTTTCTCACCGATCTGACGCTTATTCACTTAAACAGTAACAGATTTTCCGGTACGATACCGGTGAGTTTCCGGCAACTCCAATTTCTTCAAGAACTGGATCTCAGCAACAACAACTTCTCCGGCGAGTTCCCCGCCGTCACTCTCTACATTCCGAATCTCAAGTATTTAGATCTAAGATTCAACTCCTTCACCGGCCCAATCCCGGAAGAATTGTTCTTCAAGGAACTAGACGCCATTTTCATAAACGACAATCAATTCACCGGCGAAATCCCCCAAAACCTGGGGAATTCACCGGCGTCTGTGATAAATCTGGCGAATAATCACTTTGTCGGAGCAATTCCGGCGAGTTTTGGGTATATGGGTCCGAGATTGAAGGAAATTCTGTTCCTAAACAACCAATTAACCGGTTGTATTCCAGTAGGAGTTGGGTTTTTGACAGAAATTGAAGTCTTGGATTTCAGTTCCAACAAATTGTTCGGTCATCTTCCTGATACAATCTCTTGCATGAACCAAGTTGAGATTTTGAATCTAGCCCACAACGAGCTATCCGGCGTCGTTTCGGATTTGGTCTGTTCCTTGAGAAGCCTCGTGAATCTGTCCGTAGCGGATAATTTCTTCTCCGGCTTCAACCAGCAGTGTCGGAACCTGTTCGGTGGGTTGGATTTGTCGTTCAATTGCATTCCGGGGGTGGGTCTGCAGCGGCCGTCGCCGGAATGTTCTGTAATTCCGGGAATTGGGTTGAGTTGCCTCCGGGTTCCTGGACTTCCACGGCCGTTGGTTTGTGGGCGGCTCGTTGAAACGCCGGCGGCGGAAGCGGCGGCCCCGTGA
mRNA sequence
ATGGAGGGTTGGGTTTTTTTCTGTCTGTTATTAAGTGGTCTAGTTCTCCCCACCCGAGCCATTGTTGGAGTCGGCGGCGGAGTTCGTTTTGGCTTTGGCGGTGGCGGAGGAGGTATTTGGGTTGGCGGAGGAGGAAACACTCCGACTCCGACTCCAAATCCATTGTTAGGGACTCAACTAAACAGAGCATACTCTGTTCTTCAGACATGGAAATCTGCCATTTCCGACGACCCCACCGGAATTTTAACCACATGGGTCGGCTCAGATGTATGTTCTTACCAAGGAATCTTCTGTACAAATCATAGTTCCGGCCAAATATCCGTCACCGGAATCGACCTCAACGGCAAGAATCTCAGAGGAAACCTCATCAAGGATCTGGCCTTTCTCACCGATCTGACGCTTATTCACTTAAACAGTAACAGATTTTCCGGTACGATACCGGTGAGTTTCCGGCAACTCCAATTTCTTCAAGAACTGGATCTCAGCAACAACAACTTCTCCGGCGAGTTCCCCGCCGTCACTCTCTACATTCCGAATCTCAAGTATTTAGATCTAAGATTCAACTCCTTCACCGGCCCAATCCCGGAAGAATTGTTCTTCAAGGAACTAGACGCCATTTTCATAAACGACAATCAATTCACCGGCGAAATCCCCCAAAACCTGGGGAATTCACCGGCGTCTGTGATAAATCTGGCGAATAATCACTTTGTCGGAGCAATTCCGGCGAGTTTTGGGTATATGGGTCCGAGATTGAAGGAAATTCTGTTCCTAAACAACCAATTAACCGGTTGTATTCCAGTAGGAGTTGGGTTTTTGACAGAAATTGAAGTCTTGGATTTCAGTTCCAACAAATTGTTCGGTCATCTTCCTGATACAATCTCTTGCATGAACCAAGTTGAGATTTTGAATCTAGCCCACAACGAGCTATCCGGCGTCGTTTCGGATTTGGTCTGTTCCTTGAGAAGCCTCGTGAATCTGTCCGTAGCGGATAATTTCTTCTCCGGCTTCAACCAGCAGTGTCGGAACCTGTTCGGTGGGTTGGATTTGTCGTTCAATTGCATTCCGGGGGTGGGTCTGCAGCGGCCGTCGCCGGAATGTTCTGTAATTCCGGGAATTGGGTTGAGTTGCCTCCGGGTTCCTGGACTTCCACGGCCGTTGGTTTGTGGGCGGCTCGTTGAAACGCCGGCGGCGGAAGCGGCGGCCCCGTGA
Coding sequence (CDS)
ATGGAGGGTTGGGTTTTTTTCTGTCTGTTATTAAGTGGTCTAGTTCTCCCCACCCGAGCCATTGTTGGAGTCGGCGGCGGAGTTCGTTTTGGCTTTGGCGGTGGCGGAGGAGGTATTTGGGTTGGCGGAGGAGGAAACACTCCGACTCCGACTCCAAATCCATTGTTAGGGACTCAACTAAACAGAGCATACTCTGTTCTTCAGACATGGAAATCTGCCATTTCCGACGACCCCACCGGAATTTTAACCACATGGGTCGGCTCAGATGTATGTTCTTACCAAGGAATCTTCTGTACAAATCATAGTTCCGGCCAAATATCCGTCACCGGAATCGACCTCAACGGCAAGAATCTCAGAGGAAACCTCATCAAGGATCTGGCCTTTCTCACCGATCTGACGCTTATTCACTTAAACAGTAACAGATTTTCCGGTACGATACCGGTGAGTTTCCGGCAACTCCAATTTCTTCAAGAACTGGATCTCAGCAACAACAACTTCTCCGGCGAGTTCCCCGCCGTCACTCTCTACATTCCGAATCTCAAGTATTTAGATCTAAGATTCAACTCCTTCACCGGCCCAATCCCGGAAGAATTGTTCTTCAAGGAACTAGACGCCATTTTCATAAACGACAATCAATTCACCGGCGAAATCCCCCAAAACCTGGGGAATTCACCGGCGTCTGTGATAAATCTGGCGAATAATCACTTTGTCGGAGCAATTCCGGCGAGTTTTGGGTATATGGGTCCGAGATTGAAGGAAATTCTGTTCCTAAACAACCAATTAACCGGTTGTATTCCAGTAGGAGTTGGGTTTTTGACAGAAATTGAAGTCTTGGATTTCAGTTCCAACAAATTGTTCGGTCATCTTCCTGATACAATCTCTTGCATGAACCAAGTTGAGATTTTGAATCTAGCCCACAACGAGCTATCCGGCGTCGTTTCGGATTTGGTCTGTTCCTTGAGAAGCCTCGTGAATCTGTCCGTAGCGGATAATTTCTTCTCCGGCTTCAACCAGCAGTGTCGGAACCTGTTCGGTGGGTTGGATTTGTCGTTCAATTGCATTCCGGGGGTGGGTCTGCAGCGGCCGTCGCCGGAATGTTCTGTAATTCCGGGAATTGGGTTGAGTTGCCTCCGGGTTCCTGGACTTCCACGGCCGTTGGTTTGTGGGCGGCTCGTTGAAACGCCGGCGGCGGAAGCGGCGGCCCCGTGA
Protein sequence
MEGWVFFCLLLSGLVLPTRAIVGVGGGVRFGFGGGGGGIWVGGGGNTPTPTPNPLLGTQLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQISVTGIDLNGKNLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLYIPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHFVGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCMNQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGGLDLSFNCIPGVGLQRPSPECSVIPGIGLSCLRVPGLPRPLVCGRLVETPAAEAAAP
Homology
BLAST of CmaCh05G013770 vs. ExPASy Swiss-Prot
Match:
Q9LHF1 (Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 1.1e-82
Identity = 170/369 (46.07%), Postives = 219/369 (59.35%), Query Frame = 0
Query: 42 GGGGNTPTPTPNPLL-GTQLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTN 101
G G T P+ + +L AY LQ WK AI DP I W+GS+VC+Y G+FC+
Sbjct: 55 GDRGENVTVDPSLIFENPRLRSAYIALQAWKQAILSDPNNITVNWIGSNVCNYTGVFCSK 114
Query: 102 HSSGQ--ISVTGIDLNGKNLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQE 161
+ +V GIDLN ++ G L ++L LTDL L H+NSNRF GT+P F+QL+ L E
Sbjct: 115 ALDNRKIRTVAGIDLNHADIAGYLPEELGLLTDLALFHVNSNRFCGTVPHKFKQLKLLFE 174
Query: 162 LDLSNNNFSGEFPAVTLYIPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIP 221
LDLSNN F+G+FP V L++P+LK+LDLRFN F G +P+ELF K LDAIFIN N+F E+P
Sbjct: 175 LDLSNNRFAGKFPTVVLHLPSLKFLDLRFNEFEGTVPKELFSKNLDAIFINHNRFRFELP 234
Query: 222 QNLGNSPASVINLANNHFVGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVL 281
+N G+SP SVI LANNHF G IP S M L EI+F+NN L C+P +G L + V
Sbjct: 235 ENFGDSPVSVIVLANNHFHGCIPTSLVEM-KNLNEIIFMNNGLNSCLPADIGRLKNVTVF 294
Query: 282 DFSSNKLFGHLPDTISCMNQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQ 341
D S N+L G LP+++ M +VE LN+AHN LSG + +C L L N + + NFF+G
Sbjct: 295 DVSFNELVGPLPESVGGMVEVEQLNVAHNLLSGKIPASICQLPKLENFTYSYNFFTGEAP 354
Query: 342 QCRNLFGGLDLSFNCIPGVGLQRPSPECSVIPGIGLSCLRVPGLPRPLV------CGRLV 401
C L D NC+PG QR S +CS L RP V CGR V
Sbjct: 355 VCLRL-SEFDDRRNCLPGRPAQRSSRQCSAF------------LSRPSVDCGSFGCGRSV 409
BLAST of CmaCh05G013770 vs. ExPASy Swiss-Prot
Match:
O48809 (Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1)
HSP 1 Score: 305.1 bits (780), Expect = 1.2e-81
Identity = 155/322 (48.14%), Postives = 201/322 (62.42%), Query Frame = 0
Query: 60 LNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQIS--VTGIDLNGKN 119
L +AY LQ+WK AI DP W GSDVCSY GIFC S + V GIDLN +
Sbjct: 53 LRQAYIALQSWKQAIFSDPFNFTANWNGSDVCSYNGIFCAPSPSSPKTRVVAGIDLNHAD 112
Query: 120 LRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLYI 179
+ G L ++L LTDL L HLNSNRF G +P++F+ ++ L ELDLSNN F G+FP V L +
Sbjct: 113 MAGYLPRELGLLTDLALFHLNSNRFCGEVPLTFKHMKLLFELDLSNNRFVGKFPNVVLSL 172
Query: 180 PNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHFV 239
P+LK+LDLR+N F G IP +LF KELDAIF+N N+F IP+N+GNSP S + LA+N
Sbjct: 173 PSLKFLDLRYNEFEGSIPSKLFDKELDAIFLNHNRFMFGIPENMGNSPVSALVLADNDLG 232
Query: 240 GAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCMN 299
G IP S G MG L EI+ N+ LTGC+P +G L + V D S N+L G LP +I M
Sbjct: 233 GCIPGSIGLMGKTLNEIILSNDNLTGCLPPQIGNLKNVTVFDISFNRLSGPLPSSIGNMK 292
Query: 300 QVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGG---LDLSFNCI 359
+E LN+A+N +GV+ +C L +L N + + NFF+G +C L G ++ S NCI
Sbjct: 293 SLEQLNVANNRFTGVIPSSICQLSNLENFTYSSNFFTGDAPRCVALLGDNVVVNGSMNCI 352
Query: 360 PGVGLQRPSPECSVIPGIGLSC 377
G QR S ECS + C
Sbjct: 353 DGKEDQRSSKECSSPASRSVDC 374
BLAST of CmaCh05G013770 vs. ExPASy Swiss-Prot
Match:
Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)
HSP 1 Score: 304.7 bits (779), Expect = 1.6e-81
Identity = 154/316 (48.73%), Postives = 197/316 (62.34%), Query Frame = 0
Query: 59 QLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQ--ISVTGIDLNGK 118
+L AY LQ WK AI DP T W+GSDVCSY G++C + +V GIDLN
Sbjct: 77 RLRNAYIALQAWKQAILSDPNNFTTNWIGSDVCSYTGVYCAPALDNRRIRTVAGIDLNHA 136
Query: 119 NLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLY 178
++ G L ++L LTDL L H+NSNRF GT+P F +L+ L ELDLSNN F+G FP V L
Sbjct: 137 DIAGYLPQELGLLTDLALFHINSNRFCGTVPHRFNRLKLLFELDLSNNRFAGIFPTVVLQ 196
Query: 179 IPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHF 238
+P+LK+LDLRFN F GP+P ELF K+LDAIFIN N+F E+P NLG+SP SVI +ANNHF
Sbjct: 197 LPSLKFLDLRFNEFEGPVPRELFSKDLDAIFINHNRFRFELPDNLGDSPVSVIVVANNHF 256
Query: 239 VGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCM 298
G IP S G M L+EI+F+ N C+P +G L + V DFS N+L G LP +I M
Sbjct: 257 HGCIPTSLGDM-RNLEEIIFMENGFNSCLPSQIGRLKNVTVFDFSFNELVGSLPASIGGM 316
Query: 299 NQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGGLDLSFNCIPG 358
+E LN+AHN SG + +C L L N + + NFF+G C L G D NC+P
Sbjct: 317 VSMEQLNVAHNRFSGKIPATICQLPRLENFTFSYNFFTGEPPVCLGL-PGFDDRRNCLPA 376
Query: 359 VGLQRPSPECSVIPGI 373
QR +C+ +
Sbjct: 377 RPAQRSPGQCAAFSSL 390
BLAST of CmaCh05G013770 vs. ExPASy Swiss-Prot
Match:
Q4PSE6 (Leucine-rich repeat extensin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=LRX7 PE=2 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 3.0e-80
Identity = 152/346 (43.93%), Postives = 207/346 (59.83%), Query Frame = 0
Query: 59 QLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQI--SVTGIDLNGK 118
+L RAY LQ WK A+ DP + T W GS VC Y G+ C+ + +V+G+DLN
Sbjct: 50 RLERAYVALQAWKRAMISDPWNLTTNWFGSRVCDYNGVVCSESLDDPLVKTVSGVDLNQG 109
Query: 119 NLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLY 178
++ G+L ++L LTD+ L H+NSNRF GT+PV F QL L ELDLSNN F+G+FP V +
Sbjct: 110 DIAGHLPEELGLLTDIALFHVNSNRFCGTLPVGFSQLSLLFELDLSNNRFAGKFPEVVIG 169
Query: 179 IPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHF 238
+P LKYLDLR+N F G +PE LF K+LDA+F+N N+F +IP N+GNSP SV+ LA+N F
Sbjct: 170 LPKLKYLDLRYNEFEGELPESLFDKDLDALFLNSNRFRSKIPVNMGNSPVSVLVLASNRF 229
Query: 239 VGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCM 298
G IP SFG MG L EI+ ++N L CIP +G L + VLD S N L G LP ++ M
Sbjct: 230 EGCIPPSFGKMGKTLNEIILMDNGLQSCIPNDMGLLQNVTVLDISYNWLVGELPKSMGQM 289
Query: 299 NQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGGLDLSFNCIPG 358
+E+LN+ N LSG++ D +CSL L + N+F+G CR L + + NC
Sbjct: 290 ENLEVLNVERNMLSGLIPDELCSLEKLRDFRYGSNYFTGEPATCRYL-ENYNYTMNCFKD 349
Query: 359 VGLQRPSPECSVIPGIGLSCLRVPGLPRPLVCGRLVETPAAEAAAP 403
V QR EC + L +P+ C +P + +P
Sbjct: 350 VRDQRSMMECKMF------------LSKPVDCDSFKCSPGSSCFSP 382
BLAST of CmaCh05G013770 vs. ExPASy Swiss-Prot
Match:
Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 1.2e-78
Identity = 149/310 (48.06%), Postives = 198/310 (63.87%), Query Frame = 0
Query: 59 QLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQ--ISVTGIDLNGK 118
+L AY LQ WK AI DP + W+GS+VC+Y G+FC+ + +V GIDLN
Sbjct: 65 RLRNAYIALQAWKQAILSDPNNFTSNWIGSNVCNYTGVFCSPALDNRKIRTVAGIDLNHA 124
Query: 119 NLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLY 178
++ G L ++L L+DL L H+NSNRF GT+P F +L+ L ELDLSNN F+G+FP V L
Sbjct: 125 DIAGYLPEELGLLSDLALFHVNSNRFCGTVPHRFNRLKLLFELDLSNNRFAGKFPTVVLQ 184
Query: 179 IPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHF 238
+P+LK+LDLRFN F G +P+ELF K+LDAIFIN N+F E+P+N G+SP SVI LANN F
Sbjct: 185 LPSLKFLDLRFNEFEGTVPKELFSKDLDAIFINHNRFRFELPENFGDSPVSVIVLANNRF 244
Query: 239 VGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCM 298
G +P+S M L EI+F+NN L C+P +G L + V D S N+L G LP+++ M
Sbjct: 245 HGCVPSSLVEM-KNLNEIIFMNNGLNSCLPSDIGRLKNVTVFDVSFNELVGPLPESVGEM 304
Query: 299 NQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGGLDLSFNCIPG 358
VE LN+AHN LSG + +C L L N + + NFF+G C L D NC+PG
Sbjct: 305 VSVEQLNVAHNMLSGKIPASICQLPKLENFTYSYNFFTGEAPVCLRL-PEFDDRRNCLPG 364
Query: 359 VGLQRPSPEC 367
QR +C
Sbjct: 365 RPAQRSPGQC 372
BLAST of CmaCh05G013770 vs. TAIR 10
Match:
AT2G19780.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 464.9 bits (1195), Expect = 6.5e-131
Identity = 229/383 (59.79%), Postives = 281/383 (73.37%), Query Frame = 0
Query: 9 LLLSGLVLPTRAIVGVGGGVRFGFGGGGGGIWVGGGGNTPTPTPNPLLGTQLNRAYSVLQ 68
L L+ L+L +GVG G+ G G GG+W+GGG P P N AY+ LQ
Sbjct: 18 LFLNCLILTNGYSIGVGVGIG-GGDGDDGGVWIGGGNPNSNPGSAPNQQQTTNAAYNALQ 77
Query: 69 TWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQISVTGIDLNGKNLRGNLIKDLAF 128
+WKSAI++DP+G+L TWVG DVCSY+G+FC+ S+T IDLN NL+G ++KDL+
Sbjct: 78 SWKSAITEDPSGVLKTWVGEDVCSYRGVFCSGS-----SITSIDLNKANLKGTIVKDLSL 137
Query: 129 LTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLYIPNLKYLDLRFN 188
L+DLT++HLNSNRFSG IP SF+ L LQELDLSNN FSG FP VTLYIPNL YLDLRFN
Sbjct: 138 LSDLTILHLNSNRFSGQIPDSFKNLDSLQELDLSNNRFSGSFPQVTLYIPNLVYLDLRFN 197
Query: 189 SFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHFVGAIPASFGYMG 248
+FTG IPE LF K+LDAI +N+NQFTGEIP NLG S ASVINLANN G IP SFG G
Sbjct: 198 NFTGSIPENLFNKQLDAILLNNNQFTGEIPGNLGYSTASVINLANNKLSGEIPTSFGITG 257
Query: 249 PRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCMNQVEILNLAHNE 308
+LKE+LFLNNQLTGCIP VG ++IEV D S N L GH+PDTISC++++E+LNL HN+
Sbjct: 258 SKLKEVLFLNNQLTGCIPESVGLFSDIEVFDVSFNSLMGHVPDTISCLSEIEVLNLGHNK 317
Query: 309 LSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGGLDLSFNCIPGVGLQRPSPECSV 368
SG + DLVC+LR+L+NL+V+ NFFSGF+ QC +L G D + NCIPG G QRP P+CS
Sbjct: 318 FSGDLPDLVCTLRNLINLTVSFNFFSGFSSQCSSLSVGFDFTGNCIPGKGYQRPQPDCSA 377
Query: 369 IPGIGLSCLRVPGLPRPLVCGRL 392
IPG LSC R+P +PL C +
Sbjct: 378 IPGGQLSCFRIPA--QPLTCAAI 392
BLAST of CmaCh05G013770 vs. TAIR 10
Match:
AT4G29240.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 458.4 bits (1178), Expect = 6.0e-129
Identity = 245/392 (62.50%), Postives = 284/392 (72.45%), Query Frame = 0
Query: 7 FCLLLSGLVLPTRAIVGVGGGVRFGF----GGGGGGIWVGGGGNTPTPTPNPLLGTQL-N 66
F L L GLV T A GVGGGV G GGGGGG+WVGGG N N + G+ N
Sbjct: 16 FFLFLGGLV-QTDASFGVGGGVGVGIGGGGGGGGGGVWVGGGYNN-GGNRNAVPGSSAPN 75
Query: 67 R-AYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQISVTGIDLNGKNLRG 126
R AY+ LQ WKSA+ +DP+ +L TWVGSDVCSY+G+FC SGQ S+T IDLN NL+G
Sbjct: 76 RVAYNALQVWKSAMREDPSNVLKTWVGSDVCSYKGVFC----SGQ-SITSIDLNHANLKG 135
Query: 127 NLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLYIPNL 186
L+KDLA L+DL ++HLNSNRFSG IP SF+ L LQELDLSNN SG FP VTLYIPNL
Sbjct: 136 TLVKDLALLSDLNILHLNSNRFSGQIPDSFKSLASLQELDLSNNKLSGPFPLVTLYIPNL 195
Query: 187 KYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHFVGAI 246
YLDLRFNS TG IPEELF K LDAI +N+NQF GEIP+NLGNSPASVINLANN F G I
Sbjct: 196 VYLDLRFNSLTGFIPEELFNKRLDAILLNNNQFVGEIPRNLGNSPASVINLANNRFSGEI 255
Query: 247 PASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCMNQVE 306
P SFG G R+KE+L LNNQLTGCIP VG +EIEV D S N L GH+PDTISC++ +E
Sbjct: 256 PTSFGLTGSRVKEVLLLNNQLTGCIPESVGMFSEIEVFDVSYNALMGHVPDTISCLSAIE 315
Query: 307 ILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFG-GLDLSFNCIPGVGL 366
ILNLAHN+ SG V DLVCSLR+L+NL+VA NFFSGF+ +C + G D NCIPG
Sbjct: 316 ILNLAHNKFSGEVPDLVCSLRNLINLTVAFNFFSGFSSECSSRVSFGFDFVGNCIPGRNS 375
Query: 367 QRPSPECSVIPGIGLSCLRVPGLPRPLVCGRL 392
QRP P+CS G +SC R+P +PL C +
Sbjct: 376 QRPQPDCSGYSGGAMSCFRIP--TQPLACAAI 398
BLAST of CmaCh05G013770 vs. TAIR 10
Match:
AT3G24480.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 308.5 bits (789), Expect = 7.7e-84
Identity = 170/369 (46.07%), Postives = 219/369 (59.35%), Query Frame = 0
Query: 42 GGGGNTPTPTPNPLL-GTQLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTN 101
G G T P+ + +L AY LQ WK AI DP I W+GS+VC+Y G+FC+
Sbjct: 55 GDRGENVTVDPSLIFENPRLRSAYIALQAWKQAILSDPNNITVNWIGSNVCNYTGVFCSK 114
Query: 102 HSSGQ--ISVTGIDLNGKNLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQE 161
+ +V GIDLN ++ G L ++L LTDL L H+NSNRF GT+P F+QL+ L E
Sbjct: 115 ALDNRKIRTVAGIDLNHADIAGYLPEELGLLTDLALFHVNSNRFCGTVPHKFKQLKLLFE 174
Query: 162 LDLSNNNFSGEFPAVTLYIPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIP 221
LDLSNN F+G+FP V L++P+LK+LDLRFN F G +P+ELF K LDAIFIN N+F E+P
Sbjct: 175 LDLSNNRFAGKFPTVVLHLPSLKFLDLRFNEFEGTVPKELFSKNLDAIFINHNRFRFELP 234
Query: 222 QNLGNSPASVINLANNHFVGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVL 281
+N G+SP SVI LANNHF G IP S M L EI+F+NN L C+P +G L + V
Sbjct: 235 ENFGDSPVSVIVLANNHFHGCIPTSLVEM-KNLNEIIFMNNGLNSCLPADIGRLKNVTVF 294
Query: 282 DFSSNKLFGHLPDTISCMNQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQ 341
D S N+L G LP+++ M +VE LN+AHN LSG + +C L L N + + NFF+G
Sbjct: 295 DVSFNELVGPLPESVGGMVEVEQLNVAHNLLSGKIPASICQLPKLENFTYSYNFFTGEAP 354
Query: 342 QCRNLFGGLDLSFNCIPGVGLQRPSPECSVIPGIGLSCLRVPGLPRPLV------CGRLV 401
C L D NC+PG QR S +CS L RP V CGR V
Sbjct: 355 VCLRL-SEFDDRRNCLPGRPAQRSSRQCSAF------------LSRPSVDCGSFGCGRSV 409
BLAST of CmaCh05G013770 vs. TAIR 10
Match:
AT1G62440.1 (leucine-rich repeat/extensin 2 )
HSP 1 Score: 305.1 bits (780), Expect = 8.5e-83
Identity = 155/322 (48.14%), Postives = 201/322 (62.42%), Query Frame = 0
Query: 60 LNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQIS--VTGIDLNGKN 119
L +AY LQ+WK AI DP W GSDVCSY GIFC S + V GIDLN +
Sbjct: 93 LRQAYIALQSWKQAIFSDPFNFTANWNGSDVCSYNGIFCAPSPSSPKTRVVAGIDLNHAD 152
Query: 120 LRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLYI 179
+ G L ++L LTDL L HLNSNRF G +P++F+ ++ L ELDLSNN F G+FP V L +
Sbjct: 153 MAGYLPRELGLLTDLALFHLNSNRFCGEVPLTFKHMKLLFELDLSNNRFVGKFPNVVLSL 212
Query: 180 PNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHFV 239
P+LK+LDLR+N F G IP +LF KELDAIF+N N+F IP+N+GNSP S + LA+N
Sbjct: 213 PSLKFLDLRYNEFEGSIPSKLFDKELDAIFLNHNRFMFGIPENMGNSPVSALVLADNDLG 272
Query: 240 GAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCMN 299
G IP S G MG L EI+ N+ LTGC+P +G L + V D S N+L G LP +I M
Sbjct: 273 GCIPGSIGLMGKTLNEIILSNDNLTGCLPPQIGNLKNVTVFDISFNRLSGPLPSSIGNMK 332
Query: 300 QVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGG---LDLSFNCI 359
+E LN+A+N +GV+ +C L +L N + + NFF+G +C L G ++ S NCI
Sbjct: 333 SLEQLNVANNRFTGVIPSSICQLSNLENFTYSSNFFTGDAPRCVALLGDNVVVNGSMNCI 392
Query: 360 PGVGLQRPSPECSVIPGIGLSC 377
G QR S ECS + C
Sbjct: 393 DGKEDQRSSKECSSPASRSVDC 414
BLAST of CmaCh05G013770 vs. TAIR 10
Match:
AT4G18670.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 304.7 bits (779), Expect = 1.1e-82
Identity = 154/316 (48.73%), Postives = 197/316 (62.34%), Query Frame = 0
Query: 59 QLNRAYSVLQTWKSAISDDPTGILTTWVGSDVCSYQGIFCTNHSSGQ--ISVTGIDLNGK 118
+L AY LQ WK AI DP T W+GSDVCSY G++C + +V GIDLN
Sbjct: 77 RLRNAYIALQAWKQAILSDPNNFTTNWIGSDVCSYTGVYCAPALDNRRIRTVAGIDLNHA 136
Query: 119 NLRGNLIKDLAFLTDLTLIHLNSNRFSGTIPVSFRQLQFLQELDLSNNNFSGEFPAVTLY 178
++ G L ++L LTDL L H+NSNRF GT+P F +L+ L ELDLSNN F+G FP V L
Sbjct: 137 DIAGYLPQELGLLTDLALFHINSNRFCGTVPHRFNRLKLLFELDLSNNRFAGIFPTVVLQ 196
Query: 179 IPNLKYLDLRFNSFTGPIPEELFFKELDAIFINDNQFTGEIPQNLGNSPASVINLANNHF 238
+P+LK+LDLRFN F GP+P ELF K+LDAIFIN N+F E+P NLG+SP SVI +ANNHF
Sbjct: 197 LPSLKFLDLRFNEFEGPVPRELFSKDLDAIFINHNRFRFELPDNLGDSPVSVIVVANNHF 256
Query: 239 VGAIPASFGYMGPRLKEILFLNNQLTGCIPVGVGFLTEIEVLDFSSNKLFGHLPDTISCM 298
G IP S G M L+EI+F+ N C+P +G L + V DFS N+L G LP +I M
Sbjct: 257 HGCIPTSLGDM-RNLEEIIFMENGFNSCLPSQIGRLKNVTVFDFSFNELVGSLPASIGGM 316
Query: 299 NQVEILNLAHNELSGVVSDLVCSLRSLVNLSVADNFFSGFNQQCRNLFGGLDLSFNCIPG 358
+E LN+AHN SG + +C L L N + + NFF+G C L G D NC+P
Sbjct: 317 VSMEQLNVAHNRFSGKIPATICQLPRLENFTFSYNFFTGEPPVCLGL-PGFDDRRNCLPA 376
Query: 359 VGLQRPSPECSVIPGI 373
QR +C+ +
Sbjct: 377 RPAQRSPGQCAAFSSL 390
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LHF1 | 1.1e-82 | 46.07 | Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=L... | [more] |
O48809 | 1.2e-81 | 48.14 | Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=L... | [more] |
Q9SN46 | 1.6e-81 | 48.73 | Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L... | [more] |
Q4PSE6 | 3.0e-80 | 43.93 | Leucine-rich repeat extensin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=L... | [more] |
Q9T0K5 | 1.2e-78 | 48.06 | Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L... | [more] |