CmaCh05G013440 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G013440
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	3-hydroxyacyl-CoA dehydrogenase
Location	Cma_Chr05: 10151052 .. 10159567 (+)
RNA-Seq Expression	CmaCh05G013440
Synteny	CmaCh05G013440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAATTATTTATTTCCATCCACGAACTCGGCCATCTTTATCGCTGAGTGACCGTATAAATCTTCTACTCACTCGTTTTCAAACGAGAAACGAGCTCATCCATTTCGATTTCGTCTCGATTTTGGTTTCTTTGCTGAAATCAAGAGAGAGTTGTAGACGCAACTTAACGAAAGCTATTCGATCATGGCGGAACCTTCAATCACCATGGAGGTCGGAAATGATGGCGTTGCTGTGATCACCATGTCTAATCCTCCTGTAAACGCTCTAGCAAGATCCAGTGAGTCTGAGATTATTTTTTTATTTTTTATTTTTTAATCTCTTTCTCTGTTTGTTAGTTCTTTCTTTTGCGTTCTGTTTTTGTTTATATTTATTTTTTGGATTTTGGATTTTTGTTTCTGGACATGCAGTGTTTCCTGCCTTGAAGTCGAAATTTGATGAGGCGATGAGGAGAAATGATGTGAAGGCTGTCGTTTTAACTGGTAAGAATCAATCTCCAGCTCAACGTTTTGAGGACATGCTGGTTACTTGAGCTGGTTGGAAATTACTTTTAAGATTTTTTTTTGTGATTGGTTTTGCTTAGATCAGGTAGTCTCTTCGTGATGCATCCGTACATCATGTTCGAATTATTTAGCACGAGCTGATGGATTAAATTAAACAAACACCAAACATTAAACTCGCTCGATGTAATTTCAATTAAATCCAATTTTGATTTAGACGGACTCCGTACATGAACTTTTGACAAAATCCCCAGAACGGCAGGAAAGTGATGAGGAGAAGCGAATTCATTATGAGGAAAAGCGAATTCATCATGAACTTTTGACAAAATCCCCAGAATGGCGTGTTAAGTTGTTCTACGTCAAGTTATTTTGAGTGTGTTTCATTTTGGGTCCTTTCTGTAATCGGGTCTTAGAATAAGCTTAATTTTTAGAACGCAAATGATTATCAAATAGGTTTTTAGTTATTATGTTTTCATATTTCAATTTTCCCCTTATCAAATCAGATATATAAATATATAGCTATGCATAATTTCTATGGTAACATAAATGATTACTTGTCGCCTATCTTTGTACATTACCAGTTTACTTCTTTGGCTTAATTATAGATAGCACAACACAACTAGCAATCACGTCTGTGGCCCTGCATATTGAGGAATTTTTCCTACATGAACTAGTAACTTATATTCTTGTTTTTAGCATTTCAGGATTTCTGACATTTGAGTAACATCCTTGTTTTTGTGCTCCTATCTTATTTTGATCGTTTAATTTAATTTACTGAAGGCAAAGGAGGAAAGTTCTCTGGTGGGTTTGACATCAACGTTTTTGAAAAGATTCACAAGACTGGTGCGTTTATACTAATTCAAGTTAGGAATTTAAAGCTGGAGAAGTTTGTTCGAGAATTTAACTTTTCAAATGGTGTCTTAAATTGCAGGGGACGTGTCCCTCCTGCCTGATGTCTCTGTTGATATTGCAGTCAACACAATGGAAGGTTCTTCTCGTGCCATTTTTTAGTGTTATCCCGCTTATTATCTGAAAGATTTTCATTGTTCAATGGAACTTGTTTGTTTATGAAAATGAAACTCCATAATTCAGTGTTGTTTTCCCATAAGTGCAGATGCCAAGAAGCCAATTGTTGCTGCCATCGAAGGACTTGCTTTTGGGGGAGGGTTAGAAATGGCTTTGGTTCGTACTTCATGTTGAGCATTGTCTCATTCCTTTTTTTCCACCTCATTTTTGGATGCATTACATCATTCATCTTTATACAGGCAAGCCATGCGCGTATTGCTGTTCCTAAAGTTCAACTTGGTTTACCAGAGTTGACTCTTGGAGTAATTCCAGGATTTGGAGGTAAATTTTTATTTTGAACATATTCTTTAGTCTCAACTATGAGGATGTAGCATTCGATTCCTTTTTTTCCCTCTCTTCACAACAGTCACCGAGTTTCTGAGTACTGGTTGATTTATCAGGCACTCAACGACTTCCCAGACTTGTAGGCCTATCCAAAGCTATTGAAATGATGCTGGTATGTTGAACATTCTCTTTTCTACTTTGGTTTTCATGACACAGTATTGGAATCTGTAATGGGTTGGGATAGACTAGGATACTGGAGAGTTGCTATTGTTTGTTAGGACTAGTCCTACATAGAAATTCTTAGTAGACATAATTCATTAGATGCCATTTTATCTTAGACGTTAATTTGAAGGAAGTAAATTAGGGTCTTTAAGCCCTCACCCAGCACCTCAATCAACATACGTTTCAAAAAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTTTGGTGTTTCAGTCACCACATCTAAATTTTCTATAACCGGAGGGAAATAAGAAAATGTTTTATGATATGATTGGTTCCTCAACTATCTTGATGTATCTATTAAAGTAAAGATACCCAAAAATTTTCATTTTCTATTTGGGAAAATATTCTTGGCCTCTATATTCTTATAAAAATAATTTGGTACCTATACTTTGTTAGGAAGTAGGCTTAAACTTTTCTTCAGATTGTTTGTTACAGAATAGTGTGTGATTACTCTCTCTCCTCTTTTGTTTTTTTTTGCATTTTACGCAGTTATCTAAAACAGTCACATCTGAAGAAGGAAAGAAGCTAGGTCTTATAGATGATGTTGTCAGTCCAAATGAGTTGATGAAAGTAGCTAGAAAGTGGGCTTTAGATATTGCTGATAGACGCAAACCATGGATCCGTACTCTTCATAGGACAGACAAAATTGGGTCCCTGGCTGAAGCTCGTGTGGCACTAAAATCTGCTAGAGAGCTGGCAAAAAAGATTGCACCAAACACACCACAGCACCTTGCGTGCATTGATGTTATTGAAGAGGGAATAATTCATGGAGGATATAGTGGAGTTCTAAAGGTACCTTTGTATTAGATTCTGCATACGTTGTCTTAAGGTGTATTTTCCTGTGTGTCAGGATCAACTTGGTTTCGTTGCACCAATTTTGATTTTTTGGTGGTGGTGTTGTTTTTTGTTTTAATTTTATTTTTGCTGAAATATCTGGCTTTTTACTCGCTGCTGGCAAGGTTACTAACTTAACAATGATTGTGGCAGGAGGATAAAGTATTCAAGGAACTTGTAGCAACGGACACTGCCAAAGGTCTTGTTCACATCTTTTTTTCGCAGCGTTTAACATCAAAGGTACATTATTGATGCGAGAAACTAAGACCCTCTATCTCCTTACGCAACCAAAAAAAGGAATCCACTATTTCTTTCCCATGATGCGTTCCAATATGGCATGTCTTTCTTCAATTTTATTTATGGTTTCCAGAAGAATCAGTACCTAACTTTGTGTAACTGATACTGTACTTCTGAACTTCTCAGGTACCAAATGTTACTGATCGTGGGCTTAAACCAAGACAAGTGAAGAAAGTTGCTGTTATCGGGGGTGGTTTAATGGGTTCCGGGATAGCAACAGCTCTTATTTTAAGCAACATCCATGTTGTTCTTAAGGAAATCAATGCTGAATATCTTCAAAAGGGAACAAAAAATATTGAAGGTAGGATTTTTCATTAAACTAGTATTATTTCAGCCTTAAGATTTTGTTTGTTATCTTTTTGGGTGACTAGCACCATTGCACATTTGTTGTTTTTGTGGAAGATACTATCACTGAAGTACTTCCCCGTTTAATTGCTATAGTCCAATTTTCTCAATGCTTGCCAGGTCATAACAGAAGTTTGAGTTGAATTAGGTCCAACATCTGTCTAGGATGCTATACCCCAGTCAATCTTGTTAATGCTATCGATTATCTACTGTGAATTAGTTGGAATATGAACATTAAGATATATTGAGTTTCTGCACTGTATCAATTCATGTTAGTCAAAACTGTAAAATGCATGTTTGCCAATCATTATGTAATGTTTTTGGGATTTTGAGCATAGTAATGTTATTTTCTGATTTGAAATTATTATATATAACAACGATGGCAACAATTATATTACACTTGGTCTTGAGCGTCTTTTGAGCTATGAATATGGCTTCCGCTTGAGTGACCAAACTTTTCAAAGAAATTCCTTTGATTTGAACTTTTCAAGCTTGGGATACTTATTGTATATAGCCAGGTATTTTGATTTTGAGTCGGACATCTTTTCCTGCTCAATTCTTGAGCATCTCCTTTTATGAAGTCACGATTATTTTTCTGAAGGACTATATATATGTATGCATGGATGTAATATATTTGTGGCTTGTAATCGTTAGCGGAAGATCTATTTCTTGACAGTCTAATGCTAGCCAGTAGGAAAGTTCCTTACAAAAGGAGTGCTATTGACAGTTATAGATTACGGAACTAAGATTTTTGGATATCAATGCCTTAGACATTTAAACAAGATTGGGATTGAGGTTTCACAATGTACATCTTGTAAGCTGATGACAATTTTACTTCAATCTTGAAAACAAAAATTGTAATGTATTTTAACTGTTTTCATTTTTATTTTATATTTCAATAGAAGCATTATTATTGTGCATCATTGAACGTTATTGTCCTTGGAATTATATCTGTTAATTATTTGACAGCAAATCTTCGAGGCTTAGTAGTGAAAGGCAAGCTGACAGAAGATAAGGCAGATAAAGCCTTTCGGATTCTTAAAGGTTCATTGGATTATTCAGACTTCAAAGATGTGGATATGGTGATTGAGGTGAATTCTTAATTTTTGTTTCTATATTCTATTTTCAACAGCAATGTTTCCTAAATTACAATGACATTGGTTTGGTTGTGGTGACATCAGATTACTATTATTTATGACAATCTTTCTGGTCTCAATATTTTTCTCAGTTCCGGAATAAAATTCATATATATTCTTTTTAATTTTAATGTTGTACTGACGGCAAGGACATATTCTCATTTTTGCAGGCGGTTGTTGAGAATGTTCCCCTTAAACAAAAGATATTTAGTGAAATTGAGGAAGTGTGCCCTCCTCACTGTATATTGGCATCCAATACCTCAACTATCGACCTCAATCTAGTTGGAGAAAAAACCAGATCCTCAGATCGAATAATTGGAGCGCATTTTTTCAGGTCATATTCCAATTTTGTTTTTGTTTTTTTTTTCTTTTTATGTTTGTTTGTTTGTTTTTTTTTTCTTTAAAATTCAAGTTTACCGTTCTTCCTGTCAATCCCTGTGCAAGTCCAAGCCAACCAGCATTGAATCTCAAGGAACATTTTGAATCTCTTAAGTTCCATCAACCAGTGTGTGAGGAACGTTGTTTTCCATTTTTTGCTCAGAAAAAAGAAAAAAAAAAAGAAAAAAAAAGAGAAAAAAAAAAAAAGAGAATGTTATGTGGACTGTAGAGTGAACTCCTTTTTCCCTTTTCTGATTTGTAGTTTGCAGGAGTCAAAATTATTAATGTTCTAGTCTAATAATTCAAAGGATATAGCAATTTCTTTCCTGCACAAATAACCGGAAGTAATAAGCATCATCCAGTATCAGGTTAAACATATGAACTGGAATCCAATGTTACTGTGAAGTTCTCTCTGGTACTCGATCTACAGGGGCATCTAATAGTTATTTTCTTGTATTATATTGAGCTTATGGTGGAACGTGTATTGTGATTGTCTTTTATAATTTCATCTCTTCATAGAATTATTGCGAGTGTACAATAGATGTTGAGATGCACGTCATATTTTCAAAGGATAAGCATGATAATATTTTGAGTAACATTGGATGGATCTTAACTGCCTCATTGAAGAAAGAACAATGAAGGCCTTATTTGACCTCATTATCTTTTTTCTTATGTGTATTAGTCTTCCCAAGCCATGAGGTTACATGATGTTTTTATTTTCATTTTCGTAATATGCAGTCTCTTTTATATAATTTCTTTCACCCAATCCAATTACTAATTATTAGCAACTTTTGTTCACACCTTTCTACTATGGACAGCCCTGCTCACATTATGCCTCTCCTCGAAATTGTACGGACAGAAAAGACTTCCCCACAAGTGATTCTTGATCTTATGAATGTTGGAAAAATCATAAAGAAGGTTCCTGTTGTTGTGGGCAACCGCACTGGATTTGCAGTCAATCGCGCATTTTTCCCATATGCTCAGGCTGCACATTTTCTGATTAATTTAGGTGTCGACCCATTCAGAATTGACCGGGTGATCACCAAATTTGGTCTTCCCTTGGGCCCTTTGCAGTAAGTCAATTCCTCAGTACTAGCATCTTTTCTCTTGTTATCTTTATTATAAACAATGTTGCTTGCCCATCTTTATATGAGAATTATTATTTAATTTCTATATTTGACCTCATGGCATACAAGATACTAGTCTCTTTCTTATTTCTTGAATCGTATCTTCATTTCACATTCAATTTTCTCCCTGGTCAGCACTGTTCAATGGTGGTTTTCTTTACCTCTCTCTCAAGATAATACAATTTTGATAGATATTTAGAAGGAATAGGTTGGGTCAGTTCAATGCTTCATATCGTGGAACTAGTAAATTCTGTATGTCAAAAAATTTTCATCAAGTTACCAAGATTTTTTTTTTTTTTTTTTTTTTAATAAAATCACAAAACCAGAATTAAGGCAGTCAGTGATGTACATATTTTATATACAACTTTGCATGAGTAATGTAAGACTTGCTTAATCTCAAATCCTCTATCTGCACCATCTTAATTGCTTCTTATGCATACAGGCTTCAGGATTTAAGCGGATATGGAGTGGCAACTGCAGTATGGAAAGAATTTTCCACCGCATTTGCGGGTCGAGTTTTCTTCTCACCTTTGATTGACTTGATGAGGAAAAATGGACGCGACGGTACTGAAATTCTTGAGAATGTGTGCCTATGAATTCATGTTCAGAAATGTGAACTGCATATGCATTTTTGCCGTGCAGGTAAAAACAATGGTCGGGGTTTCTATATTTATGAGAAAGGAAGCAAACCAAAGCCTGATCCTTCAATTTTACCAATTCTGGAGGAGTCTAGGCGCATTACCAACATTATGCCGAGTGGAAAGGTACTTGAAAATGTGCAAGCAGACGCCATTTATATAAACGTGAACGCACAATCTGCATAAAATGACCACTATCTTCAAGTTGCTGTATTAAATCTTCTTGTTTGCTTCCGGCAGCCTATACCCGTTTCTGATCAGCAAATTTTGGAAATGGTACTCTTTCCTGTGGTCAATGAGGGATGTCGAGTGGTAGAAGAAGGAATCGTCGTTAGGCCGTCCGACCTTGATGTTGCGACTGTTCTTGGAATGAGCTTTCCTTCCTACCGGTATTAAAACTTCACTTATCCTTTTTAGGTTACTATTATCTGAGAATCTACTGGGTTGCCATTTCCATTTCTCTTGAAGAAAACAAAGTCGAAAAAATTACCCAGAATAGAAGATTGCGAGATGAATAAAAGAGTAACATCGACTTTTTTAATACGAAGATTTGAACCTTTACCTTATGCTTTAATTATGCATATATTGGTGAGTGATGGTTATTGGCTCCCTATCTTTTGCAGCGGTGGTCTCCTGTTTTGGGCGGATTTGGTGGGTCCTAAACATGTATATGCAAGTCTCAAGAAATGGTCAGAACAATATGGCGATTTCTTCAAGCCCTCCAAGTATTTAGAAGAAAGAGCAGCCAAAGGCATACCTTTGGTAAGATCTCTATTTTCTTCTCTCTTATTCACATTATTCTTTATGAATGCCATCTCTCTCTCTCTCTCTCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCTCCATGAATGGTCGCATGACATTTTGGTCATTTACTTGCAGAGCGAAGCCGTTTCAGAAAATGCAGCGTCGAGATCCCGACTCTGAGCAAATAAGCTTCTTTTACCCTATCGTCCTGCAATAGCTTCCCTTTCTTAGACCTTGAAATCGCCCAAAATGCAAAAGCAACAAGAAATGGTTTGCTTGTATTGTTATGAGTTCTTTTTCTTCTTTTTATTGTTCTTTTTTTGGTAGGTATTTTAGTTCAATAATGTGCGTGTGGGGATTTGGAAATGTACTCTTGGATTAAGTATGGTCCTTTGAACTTTGGAAGAGCATTTAATTTCTCTAATATAAGAAGTAATTTTAGGAGGCCACAGGTGTGATTATTATAATTTTAAATTTTGTATGTTTAATAATTACTGGATAACAGATAAATATACATTTTTTTCAAT

mRNA sequence

GCGAATTATTTATTTCCATCCACGAACTCGGCCATCTTTATCGCTGAGTGACCGTATAAATCTTCTACTCACTCGTTTTCAAACGAGAAACGAGCTCATCCATTTCGATTTCGTCTCGATTTTGGTTTCTTTGCTGAAATCAAGAGAGAGTTGTAGACGCAACTTAACGAAAGCTATTCGATCATGGCGGAACCTTCAATCACCATGGAGGTCGGAAATGATGGCGTTGCTGTGATCACCATGTCTAATCCTCCTGTAAACGCTCTAGCAAGATCCATGTTTCCTGCCTTGAAGTCGAAATTTGATGAGGCGATGAGGAGAAATGATGTGAAGGCTGTCGTTTTAACTGGTAAGAATCAATCTCCAGCTCAACGTTTTGAGGACATGCTGACGGACTCCGTACATGAACTTTTGACAAAATCCCCAGAACGGCAGGAAAGTGATGAGGAGAAGCGAATTCATTATGAGGAAAAGCGAATTCATCATGAACTTTTGACAAAATCCCCAGAATGGCGCAAAGGAGGAAAGTTCTCTGGTGGGTTTGACATCAACGTTTTTGAAAAGATTCACAAGACTGGGGACGTGTCCCTCCTGCCTGATGTCTCTGTTGATATTGCAGTCAACACAATGGAAGATGCCAAGAAGCCAATTGTTGCTGCCATCGAAGGACTTGCTTTTGGGGGAGGGTTAGAAATGGCTTTGGCAAGCCATGCGCGTATTGCTGTTCCTAAAGTTCAACTTGGTTTACCAGAGTTGACTCTTGGAGTAATTCCAGGATTTGGAGGCACTCAACGACTTCCCAGACTTGTAGGCCTATCCAAAGCTATTGAAATGATGCTGTTATCTAAAACAGTCACATCTGAAGAAGGAAAGAAGCTAGGTCTTATAGATGATGTTGTCAGTCCAAATGAGTTGATGAAAGTAGCTAGAAAGTGGGCTTTAGATATTGCTGATAGACGCAAACCATGGATCCGTACTCTTCATAGGACAGACAAAATTGGGTCCCTGGCTGAAGCTCGTGTGGCACTAAAATCTGCTAGAGAGCTGGCAAAAAAGATTGCACCAAACACACCACAGCACCTTGCGTGCATTGATGTTATTGAAGAGGGAATAATTCATGGAGGATATAGTGGAGTTCTAAAGGAGGATAAAGTATTCAAGGAACTTGTAGCAACGGACACTGCCAAAGGTCTTGTTCACATCTTTTTTTCGCAGCGTTTAACATCAAAGGTACCAAATGTTACTGATCGTGGGCTTAAACCAAGACAAGTGAAGAAAGTTGCTGTTATCGGGGGTGGTTTAATGGGTTCCGGGATAGCAACAGCTCTTATTTTAAGCAACATCCATGTTGTTCTTAAGGAAATCAATGCTGAATATCTTCAAAAGGGAACAAAAAATATTGAAGCAAATCTTCGAGGCTTAGTAGTGAAAGGCAAGCTGACAGAAGATAAGGCAGATAAAGCCTTTCGGATTCTTAAAGGTTCATTGGATTATTCAGACTTCAAAGATGTGGATATGGTGATTGAGGCGGTTGTTGAGAATGTTCCCCTTAAACAAAAGATATTTAGTGAAATTGAGGAAGTGTGCCCTCCTCACTGTATATTGGCATCCAATACCTCAACTATCGACCTCAATCTAGTTGGAGAAAAAACCAGATCCTCAGATCGAATAATTGGAGCGCATTTTTTCAGCCCTGCTCACATTATGCCTCTCCTCGAAATTGTACGGACAGAAAAGACTTCCCCACAAGTGATTCTTGATCTTATGAATGTTGGAAAAATCATAAAGAAGGTTCCTGTTGTTGTGGGCAACCGCACTGGATTTGCAGTCAATCGCGCATTTTTCCCATATGCTCAGGCTGCACATTTTCTGATTAATTTAGGTGTCGACCCATTCAGAATTGACCGGGTGATCACCAAATTTGGTCTTCCCTTGGGCCCTTTGCAGCTTCAGGATTTAAGCGGATATGGAGTGGCAACTGCAGTATGGAAAGAATTTTCCACCGCATTTGCGGGTCGAGTTTTCTTCTCACCTTTGATTGACTTGATGAGGAAAAATGGACGCGACGGTAAAAACAATGGTCGGGGTTTCTATATTTATGAGAAAGGAAGCAAACCAAAGCCTGATCCTTCAATTTTACCAATTCTGGAGGAGTCTAGGCGCATTACCAACATTATGCCGAGTGGAAAGCCTATACCCGTTTCTGATCAGCAAATTTTGGAAATGGTACTCTTTCCTGTGGTCAATGAGGGATGTCGAGTGGTAGAAGAAGGAATCGTCGTTAGGCCGTCCGACCTTGATGTTGCGACTGTTCTTGGAATGAGCTTTCCTTCCTACCGCGGTGGTCTCCTGTTTTGGGCGGATTTGGTGGGTCCTAAACATGTATATGCAAGTCTCAAGAAATGGTCAGAACAATATGGCGATTTCTTCAAGCCCTCCAAGTATTTAGAAGAAAGAGCAGCCAAAGGCATACCTTTGAGCGAAGCCGTTTCAGAAAATGCAGCGTCGAGATCCCGACTCTGAGCAAATAAGCTTCTTTTACCCTATCGTCCTGCAATAGCTTCCCTTTCTTAGACCTTGAAATCGCCCAAAATGCAAAAGCAACAAGAAATGGTTTGCTTGTATTGTTATGAGTTCTTTTTCTTCTTTTTATTGTTCTTTTTTTGGTAGGTATTTTAGTTCAATAATGTGCGTGTGGGGATTTGGAAATGTACTCTTGGATTAAGTATGGTCCTTTGAACTTTGGAAGAGCATTTAATTTCTCTAATATAAGAAGTAATTTTAGGAGGCCACAGGTGTGATTATTATAATTTTAAATTTTGTATGTTTAATAATTACTGGATAACAGATAAATATACATTTTTTTCAAT

Coding sequence (CDS)

ATGGCGGAACCTTCAATCACCATGGAGGTCGGAAATGATGGCGTTGCTGTGATCACCATGTCTAATCCTCCTGTAAACGCTCTAGCAAGATCCATGTTTCCTGCCTTGAAGTCGAAATTTGATGAGGCGATGAGGAGAAATGATGTGAAGGCTGTCGTTTTAACTGGTAAGAATCAATCTCCAGCTCAACGTTTTGAGGACATGCTGACGGACTCCGTACATGAACTTTTGACAAAATCCCCAGAACGGCAGGAAAGTGATGAGGAGAAGCGAATTCATTATGAGGAAAAGCGAATTCATCATGAACTTTTGACAAAATCCCCAGAATGGCGCAAAGGAGGAAAGTTCTCTGGTGGGTTTGACATCAACGTTTTTGAAAAGATTCACAAGACTGGGGACGTGTCCCTCCTGCCTGATGTCTCTGTTGATATTGCAGTCAACACAATGGAAGATGCCAAGAAGCCAATTGTTGCTGCCATCGAAGGACTTGCTTTTGGGGGAGGGTTAGAAATGGCTTTGGCAAGCCATGCGCGTATTGCTGTTCCTAAAGTTCAACTTGGTTTACCAGAGTTGACTCTTGGAGTAATTCCAGGATTTGGAGGCACTCAACGACTTCCCAGACTTGTAGGCCTATCCAAAGCTATTGAAATGATGCTGTTATCTAAAACAGTCACATCTGAAGAAGGAAAGAAGCTAGGTCTTATAGATGATGTTGTCAGTCCAAATGAGTTGATGAAAGTAGCTAGAAAGTGGGCTTTAGATATTGCTGATAGACGCAAACCATGGATCCGTACTCTTCATAGGACAGACAAAATTGGGTCCCTGGCTGAAGCTCGTGTGGCACTAAAATCTGCTAGAGAGCTGGCAAAAAAGATTGCACCAAACACACCACAGCACCTTGCGTGCATTGATGTTATTGAAGAGGGAATAATTCATGGAGGATATAGTGGAGTTCTAAAGGAGGATAAAGTATTCAAGGAACTTGTAGCAACGGACACTGCCAAAGGTCTTGTTCACATCTTTTTTTCGCAGCGTTTAACATCAAAGGTACCAAATGTTACTGATCGTGGGCTTAAACCAAGACAAGTGAAGAAAGTTGCTGTTATCGGGGGTGGTTTAATGGGTTCCGGGATAGCAACAGCTCTTATTTTAAGCAACATCCATGTTGTTCTTAAGGAAATCAATGCTGAATATCTTCAAAAGGGAACAAAAAATATTGAAGCAAATCTTCGAGGCTTAGTAGTGAAAGGCAAGCTGACAGAAGATAAGGCAGATAAAGCCTTTCGGATTCTTAAAGGTTCATTGGATTATTCAGACTTCAAAGATGTGGATATGGTGATTGAGGCGGTTGTTGAGAATGTTCCCCTTAAACAAAAGATATTTAGTGAAATTGAGGAAGTGTGCCCTCCTCACTGTATATTGGCATCCAATACCTCAACTATCGACCTCAATCTAGTTGGAGAAAAAACCAGATCCTCAGATCGAATAATTGGAGCGCATTTTTTCAGCCCTGCTCACATTATGCCTCTCCTCGAAATTGTACGGACAGAAAAGACTTCCCCACAAGTGATTCTTGATCTTATGAATGTTGGAAAAATCATAAAGAAGGTTCCTGTTGTTGTGGGCAACCGCACTGGATTTGCAGTCAATCGCGCATTTTTCCCATATGCTCAGGCTGCACATTTTCTGATTAATTTAGGTGTCGACCCATTCAGAATTGACCGGGTGATCACCAAATTTGGTCTTCCCTTGGGCCCTTTGCAGCTTCAGGATTTAAGCGGATATGGAGTGGCAACTGCAGTATGGAAAGAATTTTCCACCGCATTTGCGGGTCGAGTTTTCTTCTCACCTTTGATTGACTTGATGAGGAAAAATGGACGCGACGGTAAAAACAATGGTCGGGGTTTCTATATTTATGAGAAAGGAAGCAAACCAAAGCCTGATCCTTCAATTTTACCAATTCTGGAGGAGTCTAGGCGCATTACCAACATTATGCCGAGTGGAAAGCCTATACCCGTTTCTGATCAGCAAATTTTGGAAATGGTACTCTTTCCTGTGGTCAATGAGGGATGTCGAGTGGTAGAAGAAGGAATCGTCGTTAGGCCGTCCGACCTTGATGTTGCGACTGTTCTTGGAATGAGCTTTCCTTCCTACCGCGGTGGTCTCCTGTTTTGGGCGGATTTGGTGGGTCCTAAACATGTATATGCAAGTCTCAAGAAATGGTCAGAACAATATGGCGATTTCTTCAAGCCCTCCAAGTATTTAGAAGAAAGAGCAGCCAAAGGCATACCTTTGAGCGAAGCCGTTTCAGAAAATGCAGCGTCGAGATCCCGACTCTGA

Protein sequence

MAEPSITMEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRFEDMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVFEKIHKTGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELMKVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDVIEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKKVAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKADKAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNLVGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRTGFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEFSTAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIMPSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFWADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAVSENAASRSRL

Homology

[Close]

BLAST of CmaCh05G013440 vs. ExPASy Swiss-Prot
Match: Q9ZPI6 (Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 OS=Arabidopsis thaliana OX=3702 GN=AIM1 PE=1 SV=1)

HSP 1 Score: 1026.5 bits (2653), Expect = 1.5e-298
Identity = 512/774 (66.15%), Postives = 622/774 (80.36%), Query Frame = 0


Query: 6   ITMEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRF 65
           +TMEVGNDGVAVIT+SNPPVN+LA  +   LK KF +A +RNDVKA+VL G N       
Sbjct: 7   VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNN------- 66

Query: 66  EDMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVF 125
                                                           G+FSGGFDINVF
Sbjct: 67  ------------------------------------------------GRFSGGFDINVF 126

Query: 126 EKIHKTGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQ 185
           +++HKTGD+SL+P+VSV++  N MED++KP+VAA+EGLA GGGLE+A+A HAR+A PK Q
Sbjct: 127 QQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVAAPKAQ 186

Query: 186 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELM 245
           LGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSK+++SEEG KLGLID +V P +++
Sbjct: 187 LGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVPPGDVL 246

Query: 246 KVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDV 305
             +RKWALDIA+ RKP++++LHRTDKIGSL+EAR  LK++R+LAKKIAPN PQH ACI+V
Sbjct: 247 STSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHHACIEV 306

Query: 306 IEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKK 365
           IEEGIIHGGYSGVLKE +VFK+LV +DTAKGLVH+FF+QR TSKVPNVTD GLKPR +KK
Sbjct: 307 IEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKPRPIKK 366

Query: 366 VAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKAD 425
           VAVIGGGLMGSGIATAL+LSNI VVLKEIN+E+L KG K++EAN++ LV +GKLT+DKA 
Sbjct: 367 VAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLTQDKAG 426

Query: 426 KAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNL 485
           KA  + KG LDY++F DVDMVIEAV+EN+ LKQ IF EIE+VC PHCILASNTSTIDL++
Sbjct: 427 KALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTSTIDLDV 486

Query: 486 VGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRT 545
           +GEKT S DRI+GAHFFSPAH+MPLLEIVR++ TS QVILDLM VGK IKKVPVVVGN  
Sbjct: 487 IGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVVVGNCI 546

Query: 546 GFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEF 605
           GFAVNR FFPY+QAAH L NLGVD FRID VIT FGLPLGP QL DL+G+G+  AV   +
Sbjct: 547 GFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLGDLAGHGIGLAVGPIY 606

Query: 606 STAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIM 665
           +  +  R+F SP+ +L+ K+GR+GK NGRG+YIYEKGSKPKPDPS+L I+E+SR++TNIM
Sbjct: 607 AKVYGDRMFRSPMTELLLKSGRNGKINGRGYYIYEKGSKPKPDPSVLSIVEKSRKLTNIM 666

Query: 666 PSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFW 725
           P GKPI V+D++I+EM+LFPVVNE CRV++EG+V+R SDLD+A+VLGMSFPSYRGG++FW
Sbjct: 667 PGGKPISVTDKEIVEMILFPVVNEACRVLDEGVVIRASDLDIASVLGMSFPSYRGGIVFW 721

Query: 726 ADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAVSENAASRSRL 780
           AD VGPK++Y  LKK SE YG FFKPS+YLEERA  G+ LSE+ S    SRS+L
Sbjct: 727 ADTVGPKYIYERLKKLSETYGSFFKPSRYLEERAMNGMLLSESKS----SRSKL 721

[Close]

BLAST of CmaCh05G013440 vs. ExPASy Swiss-Prot
Match: Q8W1L6 (Peroxisomal fatty acid beta-oxidation multifunctional protein OS=Oryza sativa subsp. japonica OX=39947 GN=MFP PE=1 SV=2)

HSP 1 Score: 973.8 bits (2516), Expect = 1.2e-282
Identity = 483/775 (62.32%), Postives = 599/775 (77.29%), Query Frame = 0


Query: 6   ITMEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRF 65
           +TMEVG DGVAV+T+ NPPVNAL   +   LK K+ EAM R+DVKA+VLTG         
Sbjct: 7   VTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTG--------- 66

Query: 66  EDMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVF 125
                                                          GGKF GGFDINVF
Sbjct: 67  ----------------------------------------------AGGKFCGGFDINVF 126

Query: 126 EKIHKTGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQ 185
            ++HKTG+VSL+PDVSV++  N ME  KKP VAAI+GLA GGGLE+ +  HARI+ P+ Q
Sbjct: 127 TEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHARISTPEAQ 186

Query: 186 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELM 245
           LGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK +T++EGK+ GL+D + SP+EL+
Sbjct: 187 LGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDALCSPDELI 246

Query: 246 KVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDV 305
           K++R WAL+IA+ RKPWIR+L RTD++GSL+EAR  L SAR+ AKK+A N PQH AC+DV
Sbjct: 247 KMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLPQHQACLDV 306

Query: 306 IEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKK 365
           +EEG++ GG++GVLKE KVFKELV + T+K LVH FF+QRLT+KVP VTD  LKPR+++K
Sbjct: 307 MEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQLKPRKIRK 366

Query: 366 VAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKAD 425
           VAVIGGGLMGSGIATAL++SN  VVLKE+N ++LQ+G K I ANL GLV +G LT+DK +
Sbjct: 367 VAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKDKMN 426

Query: 426 KAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNL 485
           KA  +LKG+LDYSDFKDVDMVIEAV+E +PLKQ IFS++E+VCPPHCILA+NTSTIDLN+
Sbjct: 427 KAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTSTIDLNV 486

Query: 486 VGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRT 545
           VGEKT S DRIIGAHFFSPAHIMPLLEIVRTEKTSPQ ILDL+ VGK+IKKVPVVVGN T
Sbjct: 487 VGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVGNCT 546

Query: 546 GFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEF 605
           GFAVNR FFPY Q +H L+++G+D FRIDRVI+ FG+P+GP QLQDL+GYGVA AV   +
Sbjct: 547 GFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYGVALAVKDIY 606

Query: 606 STAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIM 665
           + AF  R   S L+DLM +NGR GK+NG+G+Y+YEKG KPKPDPS+  +++E RR    M
Sbjct: 607 AAAFGTRNLDSNLVDLMVQNGRQGKSNGKGYYLYEKGGKPKPDPSVQVVIDEYRRCAKTM 666

Query: 666 PSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFW 725
           P GKP+ +SDQ ILEM+ FPVVNE CRV++E +V+R SDLD+A++LGM FP +RGGL+FW
Sbjct: 667 PGGKPVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFPKFRGGLVFW 726

Query: 726 ADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEA-VSENAASRSRL 780
           AD +G  ++++ L KW+E YGDFFKPS YLE+RA + +PLS    ++ A+SRSR+
Sbjct: 727 ADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASSRSRM 726

[Close]

BLAST of CmaCh05G013440 vs. ExPASy Swiss-Prot
Match: O49809 (Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Brassica napus OX=3708 PE=2 SV=2)

HSP 1 Score: 813.5 bits (2100), Expect = 2.0e-234
Identity = 414/774 (53.49%), Postives = 546/774 (70.54%), Query Frame = 0


Query: 7   TMEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRFE 66
           T+EVG DGVAVIT+ NPPVN+L+  +  +LKS ++EA+ RNDVKA+V+TG          
Sbjct: 10  TIEVGADGVAVITLINPPVNSLSFDVLYSLKSNYEEALSRNDVKAIVVTGAK-------- 69

Query: 67  DMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVFE 126
                                                          GKFSGGFDI+ F 
Sbjct: 70  -----------------------------------------------GKFSGGFDISGFG 129

Query: 127 KIHK-TGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQ 186
           +I K T     +  +S+DI  + +E AKKP VAAI+GLA GGGLE+++A HARI+ P  Q
Sbjct: 130 EIQKGTMKEPKVGYISIDILTDLLEAAKKPSVAAIDGLALGGGLELSMACHARISAPGAQ 189

Query: 187 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELM 246
           LGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK V +EEG  LGLID VV P EL+
Sbjct: 190 LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELL 249

Query: 247 KVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDV 306
             AR+WALDIA+RRKPW+ ++ +TDK+  L EAR  LK A++  ++ APN    L C++ 
Sbjct: 250 NAARRWALDIAERRKPWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHPLMCLEA 309

Query: 307 IEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKK 366
           +E GI+ G  +G+ KE +V  E++  DT KGL+H+FFSQR T+KVP VTDRGL PR++ K
Sbjct: 310 VEVGIVSGSRAGLEKEAQVGSEVINLDTTKGLIHVFFSQRGTTKVPGVTDRGLVPRKINK 369

Query: 367 VAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKAD 426
           VA+IGGGLMGSGIATALILSN  V+LKE+N ++L+ G   ++ANL+  V KGK++++K +
Sbjct: 370 VAIIGGGLMGSGIATALILSNYSVILKEVNEKFLEAGIGRVKANLQSRVKKGKMSKEKFE 429

Query: 427 KAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNL 486
           K   +LKGSLDY  F+DVDMVIEAV+EN+ LKQ+IF+++E+ CP HCILASNTSTIDLN 
Sbjct: 430 KTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNK 489

Query: 487 VGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRT 546
           +GE+T+S DRIIGAHFFSPAH+MPLLEIVRT  TS QVI+DL++VGK I+K PVVVGN T
Sbjct: 490 IGERTKSQDRIIGAHFFSPAHVMPLLEIVRTNHTSAQVIVDLLDVGKKIRKTPVVVGNCT 549

Query: 547 GFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEF 606
           GFAVNR FFPY QAA FL+  G DP+ ID+ ++KFG+P+GP +L DL G+GVA A   +F
Sbjct: 550 GFAVNRMFFPYTQAAMFLVEHGTDPYLIDKAVSKFGMPMGPFRLCDLVGFGVAIATATQF 609

Query: 607 STAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIM 666
              F  R + S +I LM+++ R G+   +GFY+Y+   K KPDP I   ++++R ++   
Sbjct: 610 IENFPERTYKSMIIPLMQEDKRAGEATRKGFYLYDDRRKAKPDPEIKNYIDKARSVSGAK 669

Query: 667 PSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFW 726
           P  K   +S+++I+EM  FPVVNE CRV  EGI V+ +DLD+A + GM FP YRGG++FW
Sbjct: 670 PDPKLEKLSEKEIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIFGMGFPPYRGGIMFW 725

Query: 727 ADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAVSENAASRSRL 780
           AD +G K++Y+ L++WS+ YG+FFKP  +L ER +KG PLS  + +   SRSRL
Sbjct: 730 ADSIGSKYIYSKLEEWSKAYGEFFKPCAFLAERGSKGAPLSAPLEQ---SRSRL 725

[Close]

BLAST of CmaCh05G013440 vs. ExPASy Swiss-Prot
Match: Q39659 (Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Cucumis sativus OX=3659 PE=1 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 3.2e-232
Identity = 407/766 (53.13%), Postives = 536/766 (69.97%), Query Frame = 0


Query: 2   AEPSITMEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSP 61
           A+    MEVG DGVA+IT+ NPPVN+L+  +  +L+  +++A+RR+DVKA+V+TG     
Sbjct: 5   AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAK--- 64

Query: 62  AQRFEDMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFD 121
                                                               GKFSGGFD
Sbjct: 65  ----------------------------------------------------GKFSGGFD 124

Query: 122 INVFEKIH-KTGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIA 181
           I  F  +    G+   + ++S+++  +  E A+KP VAAI+GLA GGGLE+A+A HARI+
Sbjct: 125 ITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMACHARIS 184

Query: 182 VPKVQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVS 241
            P  QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML SK +  +E   LGL+D +V 
Sbjct: 185 TPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLVDAIVP 244

Query: 242 PNELMKVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHL 301
           P EL+  AR+WAL+I +RR+PW+ +LHRTDK+ SLAEAR     AR  AKK  PN    +
Sbjct: 245 PEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPNLKHTI 304

Query: 302 ACIDVIEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKP 361
           ACID +E G++ G  +G+ KE + F+ L+ +DT K L+HIFF+QR T+KVP VTD GL P
Sbjct: 305 ACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTDLGLVP 364

Query: 362 RQVKKVAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLT 421
           RQ+KKVA++GGGLMGSGIATALILSN HVVLKE+N ++LQ G   + ANL+  V KG +T
Sbjct: 365 RQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVKKGNMT 424

Query: 422 EDKADKAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTST 481
            +K +K+  +LKG L+Y  FKDVDMVIEAV+ENV LKQ+IFS++E+ CPPHC+LA+NTST
Sbjct: 425 NEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLATNTST 484

Query: 482 IDLNLVGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVV 541
           IDL L+GE+ +S DRIIGAHFFSPAHIMPLLEIVRT+ T+ QVI+DL++VGK IKK PVV
Sbjct: 485 IDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIKKTPVV 544

Query: 542 VGNRTGFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATA 601
           VGN TGFAVNR FFPY+QAA  L   GVDP++IDR I+KFG+P+GP +L DL G+GVA A
Sbjct: 545 VGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFRLCDLVGFGVAAA 604

Query: 602 VWKEFSTAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRR 661
              +F  AF  R + S LI LM+++   G++  +GFY+Y+K  K  P+P +   +E++R 
Sbjct: 605 TASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGFYVYDKNRKAGPNPELKKYIEKARN 664

Query: 662 ITNIMPSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRG 721
            + +    K   + ++ I+EM+ FPVVNE CRV+ EGI V+ +DLD+A V+GM FPSYRG
Sbjct: 665 SSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMGFPSYRG 715

Query: 722 GLLFWADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLS 767
           GL+FWAD +G  ++Y+ L++WS+QYG FFKP  YL ERA +G  LS
Sbjct: 725 GLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATLS 715

[Close]

BLAST of CmaCh05G013440 vs. ExPASy Swiss-Prot
Match: Q9ZPI5 (Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 OS=Arabidopsis thaliana OX=3702 GN=MFP2 PE=1 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 2.7e-231
Identity = 415/771 (53.83%), Postives = 539/771 (69.91%), Query Frame = 0


Query: 8   MEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRFED 67
           MEVG DGVAVIT+ NPPVN+L+  +   LKS ++EA+ RNDVKA+V+TG           
Sbjct: 11  MEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAK--------- 70

Query: 68  MLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVFEK 127
                                                         G+FSGGFDI+ F +
Sbjct: 71  ----------------------------------------------GRFSGGFDISGFGE 130

Query: 128 IHKTGDVS--LLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQ 187
           + K G+V       +S+DI  + +E A+KP VAAI+GLA GGGLE+A+A HARI+ P  Q
Sbjct: 131 MQK-GNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQ 190

Query: 188 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELM 247
           LGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK V +EEG  LGLID VV P EL+
Sbjct: 191 LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELV 250

Query: 248 KVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDV 307
             AR+WALDI  RRKPW+ ++ +TDK+  L EAR  L  A+    K APN    L C+D 
Sbjct: 251 TTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNMKHPLMCLDA 310

Query: 308 IEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKK 367
           IE GI+ G  +G+ KE +V  ++V  DT KGL+H+FFSQR T+KVP VTDRGL PR++KK
Sbjct: 311 IEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKK 370

Query: 368 VAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKAD 427
           VA+IGGGLMGSGIATALILSN  V+LKE+N ++L+ G   ++ANL+  V KG ++++K +
Sbjct: 371 VAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFE 430

Query: 428 KAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNL 487
           K   +LKGSLDY  F+DVDMVIEAV+EN+ LKQ+IF+++E+ CP HCILASNTSTIDLN 
Sbjct: 431 KTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNK 490

Query: 488 VGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRT 547
           +GE+T+S DRI+GAHFFSPAHIMPLLEIVRT  TS QVI+DL++VGK IKK PVVVGN T
Sbjct: 491 IGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCT 550

Query: 548 GFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEF 607
           GFAVNR FFPY QAA FL+  G DP+ IDR I+KFG+P+GP +L DL G+GVA A   +F
Sbjct: 551 GFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQF 610

Query: 608 STAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIM 667
              F+ R + S +I LM+++ R G+   +GFY+Y+   K KPDP +   +E++R I+ + 
Sbjct: 611 IENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVK 670

Query: 668 PSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFW 727
              K   +S++ I+EM  FPVVNE CRV  EGI V+ +DLD+A ++GM FP YRGG++FW
Sbjct: 671 LDPKLANLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFW 724

Query: 728 ADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAVSENAASR 777
           AD +G K++Y+ L +WS+ YG+FFKP  +L ER +KG+ LS  V + A+SR
Sbjct: 731 ADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVKQ-ASSR 724

[Close]

BLAST of CmaCh05G013440 vs. TAIR 10
Match: AT4G29010.1 (Enoyl-CoA hydratase/isomerase family )

HSP 1 Score: 1026.5 bits (2653), Expect = 1.1e-299
Identity = 512/774 (66.15%), Postives = 622/774 (80.36%), Query Frame = 0


Query: 6   ITMEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRF 65
           +TMEVGNDGVAVIT+SNPPVN+LA  +   LK KF +A +RNDVKA+VL G N       
Sbjct: 7   VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNN------- 66

Query: 66  EDMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVF 125
                                                           G+FSGGFDINVF
Sbjct: 67  ------------------------------------------------GRFSGGFDINVF 126

Query: 126 EKIHKTGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQ 185
           +++HKTGD+SL+P+VSV++  N MED++KP+VAA+EGLA GGGLE+A+A HAR+A PK Q
Sbjct: 127 QQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVAAPKAQ 186

Query: 186 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELM 245
           LGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSK+++SEEG KLGLID +V P +++
Sbjct: 187 LGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVPPGDVL 246

Query: 246 KVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDV 305
             +RKWALDIA+ RKP++++LHRTDKIGSL+EAR  LK++R+LAKKIAPN PQH ACI+V
Sbjct: 247 STSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHHACIEV 306

Query: 306 IEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKK 365
           IEEGIIHGGYSGVLKE +VFK+LV +DTAKGLVH+FF+QR TSKVPNVTD GLKPR +KK
Sbjct: 307 IEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKPRPIKK 366

Query: 366 VAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKAD 425
           VAVIGGGLMGSGIATAL+LSNI VVLKEIN+E+L KG K++EAN++ LV +GKLT+DKA 
Sbjct: 367 VAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLTQDKAG 426

Query: 426 KAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNL 485
           KA  + KG LDY++F DVDMVIEAV+EN+ LKQ IF EIE+VC PHCILASNTSTIDL++
Sbjct: 427 KALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTSTIDLDV 486

Query: 486 VGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRT 545
           +GEKT S DRI+GAHFFSPAH+MPLLEIVR++ TS QVILDLM VGK IKKVPVVVGN  
Sbjct: 487 IGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVVVGNCI 546

Query: 546 GFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEF 605
           GFAVNR FFPY+QAAH L NLGVD FRID VIT FGLPLGP QL DL+G+G+  AV   +
Sbjct: 547 GFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLGDLAGHGIGLAVGPIY 606

Query: 606 STAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIM 665
           +  +  R+F SP+ +L+ K+GR+GK NGRG+YIYEKGSKPKPDPS+L I+E+SR++TNIM
Sbjct: 607 AKVYGDRMFRSPMTELLLKSGRNGKINGRGYYIYEKGSKPKPDPSVLSIVEKSRKLTNIM 666

Query: 666 PSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFW 725
           P GKPI V+D++I+EM+LFPVVNE CRV++EG+V+R SDLD+A+VLGMSFPSYRGG++FW
Sbjct: 667 PGGKPISVTDKEIVEMILFPVVNEACRVLDEGVVIRASDLDIASVLGMSFPSYRGGIVFW 721

Query: 726 ADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAVSENAASRSRL 780
           AD VGPK++Y  LKK SE YG FFKPS+YLEERA  G+ LSE+ S    SRS+L
Sbjct: 727 ADTVGPKYIYERLKKLSETYGSFFKPSRYLEERAMNGMLLSESKS----SRSKL 721

[Close]

BLAST of CmaCh05G013440 vs. TAIR 10
Match: AT3G06860.1 (multifunctional protein 2 )

HSP 1 Score: 803.1 bits (2073), Expect = 1.9e-232
Identity = 415/771 (53.83%), Postives = 539/771 (69.91%), Query Frame = 0


Query: 8   MEVGNDGVAVITMSNPPVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQSPAQRFED 67
           MEVG DGVAVIT+ NPPVN+L+  +   LKS ++EA+ RNDVKA+V+TG           
Sbjct: 11  MEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAK--------- 70

Query: 68  MLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGGFDINVFEK 127
                                                         G+FSGGFDI+ F +
Sbjct: 71  ----------------------------------------------GRFSGGFDISGFGE 130

Query: 128 IHKTGDVS--LLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARIAVPKVQ 187
           + K G+V       +S+DI  + +E A+KP VAAI+GLA GGGLE+A+A HARI+ P  Q
Sbjct: 131 MQK-GNVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQ 190

Query: 188 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVVSPNELM 247
           LGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK V +EEG  LGLID VV P EL+
Sbjct: 191 LGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELV 250

Query: 248 KVARKWALDIADRRKPWIRTLHRTDKIGSLAEARVALKSARELAKKIAPNTPQHLACIDV 307
             AR+WALDI  RRKPW+ ++ +TDK+  L EAR  L  A+    K APN    L C+D 
Sbjct: 251 TTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNMKHPLMCLDA 310

Query: 308 IEEGIIHGGYSGVLKEDKVFKELVATDTAKGLVHIFFSQRLTSKVPNVTDRGLKPRQVKK 367
           IE GI+ G  +G+ KE +V  ++V  DT KGL+H+FFSQR T+KVP VTDRGL PR++KK
Sbjct: 311 IEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKK 370

Query: 368 VAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTEDKAD 427
           VA+IGGGLMGSGIATALILSN  V+LKE+N ++L+ G   ++ANL+  V KG ++++K +
Sbjct: 371 VAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFE 430

Query: 428 KAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTIDLNL 487
           K   +LKGSLDY  F+DVDMVIEAV+EN+ LKQ+IF+++E+ CP HCILASNTSTIDLN 
Sbjct: 431 KTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNK 490

Query: 488 VGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVVGNRT 547
           +GE+T+S DRI+GAHFFSPAHIMPLLEIVRT  TS QVI+DL++VGK IKK PVVVGN T
Sbjct: 491 IGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCT 550

Query: 548 GFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGLPLGPLQLQDLSGYGVATAVWKEF 607
           GFAVNR FFPY QAA FL+  G DP+ IDR I+KFG+P+GP +L DL G+GVA A   +F
Sbjct: 551 GFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQF 610

Query: 608 STAFAGRVFFSPLIDLMRKNGRDGKNNGRGFYIYEKGSKPKPDPSILPILEESRRITNIM 667
              F+ R + S +I LM+++ R G+   +GFY+Y+   K KPDP +   +E++R I+ + 
Sbjct: 611 IENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVK 670

Query: 668 PSGKPIPVSDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLDVATVLGMSFPSYRGGLLFW 727
              K   +S++ I+EM  FPVVNE CRV  EGI V+ +DLD+A ++GM FP YRGG++FW
Sbjct: 671 LDPKLANLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFW 724

Query: 728 ADLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAVSENAASR 777
           AD +G K++Y+ L +WS+ YG+FFKP  +L ER +KG+ LS  V + A+SR
Sbjct: 731 ADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVKQ-ASSR 724

[Close]

BLAST of CmaCh05G013440 vs. TAIR 10
Match: AT3G15290.1 (3-hydroxyacyl-CoA dehydrogenase family protein )

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-33
Identity = 89/286 (31.12%), Postives = 142/286 (49.65%), Query Frame = 0


Query: 362 QVKKVAVIGGGLMGSGIATALILSNIHVVLKEINAEYLQKGTKNIEANLRGLVVKGKLTE 421
           ++K V V+G G MGSGIA     S + V L + + + L + T  I ++++  V KG +++
Sbjct: 3   EMKSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLISK 62

Query: 422 DKADKAFRILKGSLDYSDFKDVDMVIEAVVENVPLKQKIFSEIEEVCPPHCILASNTSTI 481
           +  D A   L+ + +  D    D+++EA+VE+  +K+K+F +++ +     ILASNTS+I
Sbjct: 63  EVGDDAMHRLRLTSNLEDLCSADIIVEAIVESEDIKKKLFKDLDGIAKSSAILASNTSSI 122

Query: 482 DLNLVGEKTRSSDRIIGAHFFSPAHIMPLLEIVRTEKTSPQVILDLMNVGKIIKKVPVVV 541
            +  +   TR   ++IG HF +P  IM L+EI+R   TS +  L    + +   K  V  
Sbjct: 123 SITRLASATRRPSQVIGMHFMNPPPIMKLVEIIRGADTSEETFLATKVLAERFGKTTVCS 182

Query: 542 GNRTGFAVNRAFFPYAQAAHFLINLGVDPFRIDRVITKFGL--PLGPLQLQDLSGYGVAT 601
            +  GF VNR   P    A   +  GV          K G   P+GPL+L DL G  V  
Sbjct: 183 QDYAGFVVNRILMPMINEAFHTLYTGVATKEDIDSGMKHGTNHPMGPLELADLIGLDVCL 242

Query: 602 AVWKEFSTAFAGRVFF-SPLIDLMRKNGRDGKNNGRGFYIYEKGSK 645
           +V K          +   PL+      GR G+  G G Y Y + ++
Sbjct: 243 SVMKVLHEGLGDSKYAPCPLLVQYVDAGRLGRKRGVGVYDYREATQ 288

[Close]

BLAST of CmaCh05G013440 vs. TAIR 10
Match: AT4G16800.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 80.9 bits (198), Expect = 5.1e-15
Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 155 PIVAAIEGLAFGGGLEMALASHARIAVPKVQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 214
           P +AAIEG A GGGLEMALA   RI       GLPE  L +IPG GGTQRL RLVG S +
Sbjct: 140 PTIAAIEGAALGGGLEMALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVS 199

Query: 215 IEMMLLSKTVTSEEGKKLGLIDDVVSPNELMKVARKWALDIADR 259
            E++   + + + E    GL++  V+  E  + A + A  I ++
Sbjct: 200 KELIFTGRKIDAIEAANKGLVNICVTAGEAHEKAIEMAQQINEK 243

[Close]

BLAST of CmaCh05G013440 vs. TAIR 10
Match: AT4G16210.1 (enoyl-CoA hydratase/isomerase A )

HSP 1 Score: 76.6 bits (187), Expect = 9.6e-14
Identity = 68/253 (26.88%), Postives = 105/253 (41.50%), Query Frame = 0


Query: 1   MAEPSITMEVGNDGVAVITMSNP-PVNALARSMFPALKSKFDEAMRRNDVKAVVLTGKNQ 60
           ++E  I ++  + G+AVIT++ P  +N+L R+M   L   F +      V+ V+ TG  +
Sbjct: 5   VSENLIQVKKESGGIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGR 64

Query: 61  SPAQRFEDMLTDSVHELLTKSPERQESDEEKRIHYEEKRIHHELLTKSPEWRKGGKFSGG 120
           S                                                       F  G
Sbjct: 65  S-------------------------------------------------------FCSG 124

Query: 121 FDINVFEKIHKTGDVSLLPDVSVDIAVNTMEDAKKPIVAAIEGLAFGGGLEMALASHARI 180
            D+   E + K GDV    D   D  V  ME  +KPI+ AI G A   G E+ALA    +
Sbjct: 125 VDLTAAESVFK-GDVK---DPETDPVVQ-MERLRKPIIGAINGFAITAGFELALACDILV 184

Query: 181 AVPKVQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKTVTSEEGKKLGLIDDVV 240
           A    +        G+ P +G +Q+L R++G +KA E+ L S  +T++   KLG ++ VV
Sbjct: 185 ASRGAKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVNHVV 197

Query: 241 SPNELMKVARKWA 253
              E +K AR+ A
Sbjct: 245 EEGEALKKAREIA 197

The following BLAST results are available for this feature:

BLAST of CmaCh05G013440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPI6	1.5e-298	66.15	Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 OS=Arabidopsi...	[more]
Q8W1L6	1.2e-282	62.32	Peroxisomal fatty acid beta-oxidation multifunctional protein OS=Oryza sativa su...	[more]
O49809	2.0e-234	53.49	Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Brassica ...	[more]
Q39659	3.2e-232	53.13	Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Cucumis s...	[more]
Q9ZPI5	2.7e-231	53.83	Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 OS=Arabidopsi...	[more]

BLAST of CmaCh05G013440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29010.1	1.1e-299	66.15	Enoyl-CoA hydratase/isomerase family	[more]
AT3G06860.1	1.9e-232	53.83	multifunctional protein 2	[more]
AT3G15290.1	1.1e-33	31.12	3-hydroxyacyl-CoA dehydrogenase family protein	[more]
AT4G16800.1	5.1e-15	44.23	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT4G16210.1	9.6e-14	26.88	enoyl-CoA hydratase/isomerase A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001753	Enoyl-CoA hydratase/isomerase	PFAM	PF00378	ECH_1	coord: 116..267 e-value: 1.0E-27 score: 97.1
None	No IPR available	GENE3D	3.90.226.10		coord: 2..61 e-value: 7.2E-13 score: 50.4 coord: 110..362 e-value: 1.0E-81 score: 276.6
None	No IPR available	GENE3D	1.10.1040.50		coord: 549..773 e-value: 1.2E-63 score: 216.5
None	No IPR available	GENE3D	3.40.50.720		coord: 363..548 e-value: 7.9E-64 score: 217.1
None	No IPR available	PANTHER	PTHR23309	3-HYDROXYACYL-COA DEHYROGENASE	coord: 6..75
None	No IPR available	PANTHER	PTHR23309	3-HYDROXYACYL-COA DEHYROGENASE	coord: 112..769
None	No IPR available	CDD	cd06558	crotonase-like	coord: 6..255 e-value: 2.379E-51 score: 175.827
IPR006176	3-hydroxyacyl-CoA dehydrogenase, NAD binding	PFAM	PF02737	3HCDH_N	coord: 365..542 e-value: 1.3E-59 score: 201.2
IPR006108	3-hydroxyacyl-CoA dehydrogenase, C-terminal	PFAM	PF00725	3HCDH	coord: 546..639 e-value: 2.5E-17 score: 63.2 coord: 681..760 e-value: 9.6E-6 score: 26.1
IPR033346	Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like	PANTHER	PTHR23309:SF36	PEROXISOMAL FATTY ACID BETA-OXIDATION MULTIFUNCTIONAL PROTEIN AIM1	coord: 6..75
IPR033346	Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like	PANTHER	PTHR23309:SF36	PEROXISOMAL FATTY ACID BETA-OXIDATION MULTIFUNCTIONAL PROTEIN AIM1	coord: 112..769
IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	PROSITE	PS00166	ENOYL_COA_HYDRATASE	coord: 157..177
IPR008927	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	SUPERFAMILY	48179	6-phosphogluconate dehydrogenase C-terminal domain-like	coord: 673..762
IPR008927	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	SUPERFAMILY	48179	6-phosphogluconate dehydrogenase C-terminal domain-like	coord: 546..656
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 4..58
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 112..354
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 362..543

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G013440.1	CmaCh05G013440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0009908	flower development
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0006631	fatty acid metabolic process
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity
molecular_function	GO:0008692	3-hydroxybutyryl-CoA epimerase activity
molecular_function	GO:0004165	dodecenoyl-CoA delta-isomerase activity
molecular_function	GO:0004300	enoyl-CoA hydratase activity
molecular_function	GO:0070403	NAD+ binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor