CmaCh05G013390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G013390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein Mpv17
Location	Cma_Chr05: 10126102 .. 10129112 (-)
RNA-Seq Expression	CmaCh05G013390
Synteny	CmaCh05G013390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCGCCAAAAACTCGATGCCGTCAAATTAGGAGGCATGGGACTCTCATCTTCCTTCTCCTATTCTACTTCTCACCCACTTCTTCCCTTCCTCTCCTCCGTCTTCCCATAATTTTCTTCTCTGAGAATCCTTTCCGCCATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTTACCTTCCATCCGGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACTCATCTTCAAACTTCTGTGAGCATCAACCGCTTCATTTTGTTTTCTTTGTAACTTCATTGATGAGGCTATCTTTCTTGATTCCTTCTTTGAGCTTGTGGTTGATTTCCTTTCATTGATCGGAATTTTCTTGTTGACTTGAATTGCTTTTGTTCTTGTCTTGTTCTTGCTCTGATTTAGGTTGAGCGATGAAATATTTCATTGTCTTGTTTTTGTTAATTGTCATTTGATTTTTAGTCCTAACTTCAATTAATTCCTTGGTTTTACTCGAGCAAGAAATTACCGTAAGTTTCGGCGATCTTTGCTTTTTAGAATTAGCCCGCGTAATGTTGATGCTGTATCTTGATTGCATCTTCAGTGCATTTTGAAGTTTCCTGATTAATTAAAGTTCTTGGGCTGTGGGATATCATTTTATGTCTAAATGTATATGAAGGATATTTGTTCTCAATTTTTGGGCAATTTTTTTAATCATTTAGAAGTACCACTTTCAATAGTTAACTAAGAACTACTCTTCTTTTGGAGAGTGTTCTTTACTTTAGAAATCCTGAATTAAAGAGTATTCTGGGAGAATTTTAATGAATTTTCTTAGAAGTACCACGGATGCTGAATTTCATTCTTGGGGAACATCCCTTGAAGATGGAGACAAAAGCCCTTTGGGAGAATTTTATTAGACCCTTCTGCCGGGTCACTTGGCAAGAAAGAAACAGTATGATTTTTCAAGACAAGAAATCCTACAGAATGTGATTGAATTTCTCGAGTAACTTAAGACTTTGGTTGGGTGTCATTGTGTTCTCCTGCTCCTCGTCTCCTCCAAGGCCCACTGCCTCTTGCTAATGGTGGAACCCCTATGAGCTTATGTTCTTGTACGTCTATCAAATAAAAGTTCACGAATTGTCAATCTTTTTGTTGGTTCACAACCTGCTTACCTTCTCTTAGTTCAAGCTTGGCATGATCCTTTTCTAACCATATAAGGGTGATGATATTTGAAGCTCCAAGTTACTGTAATAGCCCAAGCCTACTGCTAATAGATATTGTCCATTTTGGCTCATTACGTATTACCGTCAACCTCACAATTTTAAAATGCGTCTGCTGGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTTCCCTATCCAACTGATGTGGGATCTCACAGTTACATTGTCTGGATATTCGTATTCCAATTCAATCTTTAGCACAATACACCCGTTTGCAACCCTAGATCTATAATTAAGTTTTCTTAATCTATTTTTGGTTCTATTTTCATATTTGTTTTTGCTCTTTTATTTCACATCAATTTTCTTTGGTTTTTCTCTGAAGTTGTTGCTAAGTGGTGCTCTTCCTTTATTTGTTGATCTGAAATAACTTATTGTACTGATATTAGGTGTATATTATAACTGAACCAACACCTACAATTAATTTTTTTATGTAGCAGGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGATTCGGCTTTGTTGGACCAGTCGGTCACATGTGGTTCGTTTCCTTTATCTTTTCCTTATCAACTTTTGGTCATATCTATCATCTTTGTTACTACAAGAATAAGCTTCTATATTCTCAGGAAGGCAACATGGCTCTGCTTTATCCATTATTTTTTATTTTCATATTCTGTGAATGCATAGATTGAAGTGGCAATTGGTTGGTTTGTTTAATCTTCATGGTTCTCTATGTAAGGGAAAAAAAATTGGAAAGTTCTTTAGATTCTTGGATCAAGTCCTTGCAAGTACCATACCATTAAATGGATAACGTATCTAAGTTTCTTGGATTCATGAAGTTTGGTGTAGGATAGTTTGAAGTTTTATACAAGGAAATATGTTTTAAAGATTGTGAGTTTAATATAACATGAGTTTGGTTTGTGGATTTATAATTTGTCGAGTTAACATGGAGTATAAGAAGGCGATTCTATAATCTCGAGTTTATATATCCTTCAGGTTTAGTAAACTCATATTTTGGGGTAAGTAAGATAACTCACTCGAGATTAATGCAGGTTTAAACATAACTCACTCAACTTGTTTACATTAGGTTATATAAACTTAACTCGTGAACACCTCTGAAGCTGCTAGAGGTTGCTTAAAAGTTGCATGAATTTGTAAAGTACTATTTTTTGTAACTTGATTGGACCCCCTTTCTCTTTAGGGTGCTCGCATTTGTGGGCTGTGTTCTTTTTTGTATGCTCTTGTATTCTTTCATTTTCTCGCATCAAAATTAGTACGATTATTCATTGGAATGATTGTTTTGAACTTATACGTTATTTGTGTACACGAGTATTTGAGAAATCGGATCGTTTGGCAGGTATGAAGGGTTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCACTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA

mRNA sequence

GACCGCCAAAAACTCGATGCCGTCAAATTAGGAGGCATGGGACTCTCATCTTCCTTCTCCTATTCTACTTCTCACCCACTTCTTCCCTTCCTCTCCTCCGTCTTCCCATAATTTTCTTCTCTGAGAATCCTTTCCGCCATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTTACCTTCCATCCGGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACTCATCTTCAAACTTCTGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGATTCGGCTTTGTTGGACCAGTCGGTCACATGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCACTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA

Coding sequence (CDS)

ATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTTACCTTCCATCCGGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACTCATCTTCAAACTTCTGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGATTCGGCTTTGTTGGACCAGTCGGTCACATGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCACTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA

Protein sequence

MFRLWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRVGITSMFGFGFVGPVGHMLRLQLRPKSAKFVGAKLAMDGLIFGPLDLIVFFSYMGFANGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSWFEQQNDAPWKQWFTSFNPFNEK

Homology

[Close]

BLAST of CmaCh05G013390 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17
Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 6   KWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRVGI 65
           +WY + L   P+ TQ +++A L+ TGD+ AQ +        ++   A+K   +   R+ +
Sbjct: 6   RWYNSRLAARPLLTQSVTTAFLFATGDVTAQQL--------VEKRGAQKHDLVRTGRMAL 65

Query: 66  TSMFGFGFVGPVGHML---RLQLRPKSAKFVGAKLAMDGLIFGPLDLIVFFSYMGFANGK 125
              F FG V          R+ +R      V A++A D L F P+ + VF S M    GK
Sbjct: 66  YGGFVFGPVATTWFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATMEGK 125

Query: 126 DASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSWFEQ 184
               VKE + +  +PA      VWP +QV NF  +P++Y+L + N+  +  +++LSW   
Sbjct: 126 ---SVKERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLSWVNS 175

[Close]

BLAST of CmaCh05G013390 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 5.2e-17
Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 1   MFRLWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINW 60
           M  LW+ YQ  L  HP K Q++++  L G GD+ +Q +     +  L+    E+  K+  
Sbjct: 1   MAGLWRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLE---RKGLKGHSIERTVKM-- 60

Query: 61  KRVGITSMFGFGFVGPV---GHMLRLQLRPKSAKFVG-AKLAMDGLIFGPLDLIVFFSYM 120
             +GI    GF FVGPV    + +  ++ P S K V   K+ +D + F P  L  F S  
Sbjct: 61  --MGI----GFCFVGPVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLSIA 120

Query: 121 GFANGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAF 180
              NG    ++   LKRD   A +    +WP +QVANF ++P+ ++L  V    ++ +++
Sbjct: 121 SALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSY 172

[Close]

BLAST of CmaCh05G013390 vs. ExPASy Swiss-Prot
Match: Q5BK62 (Protein Mpv17 OS=Rattus norvegicus OX=10116 GN=Mpv17 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16
Identity = 61/184 (33.15%), Postives = 85/184 (46.20%), Query Frame = 0


Query: 4   LWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRV 63
           LW+ YQ  L  HP K QV+++  L G GDI +Q +         QT            R 
Sbjct: 3   LWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTG-----------RT 62

Query: 64  GITSMFGFGFVGP-VGHMLRL--QLRPKSAKFVG-AKLAMDGLIFGPLDLIVFFSYMGFA 123
              +  G GFVGP VG   R+   L P + K     K+ +D   F P  L  F   +G  
Sbjct: 63  LTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVL 122

Query: 124 NGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSW 183
           NG  A +    LKRD   A +    +WP +Q+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct: 123 NGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSW 175

[Close]

BLAST of CmaCh05G013390 vs. ExPASy Swiss-Prot
Match: Q2KIN6 (Protein Mpv17 OS=Bos taurus OX=9913 GN=MPV17 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.4e-16
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 0


Query: 4   LWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRV 63
           LW+ YQ  LT HP K QV+++  L G GD+ +Q +     +  LQ   A +   +     
Sbjct: 3   LWRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVE---RRGLQAHQAGRTLTM----- 62

Query: 64  GITSMFGFGFVGP-VGHMLRL--QLRPKSAKFVG-AKLAMDGLIFGPLDLIVFFSYMGFA 123
              +  G GFVGP VG   R+  +L P + K     K+ +D   F P  L  F   +G  
Sbjct: 63  ---ASLGCGFVGPVVGGWYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGTL 122

Query: 124 NGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSW 180
           NG  A +    L+RD   A +    +WP +Q+ANF  VP+ Y+L  V    ++ +++LSW
Sbjct: 123 NGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

[Close]

BLAST of CmaCh05G013390 vs. ExPASy Swiss-Prot
Match: Q9NR77 (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 3.4e-16
Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 12  LTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRVGITSMFGF 71
           L  +PV T+  +S IL   G+  AQ +     K + ++ D     +         +++GF
Sbjct: 29  LRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRY--------AVYGF 88

Query: 72  GFVGPVGHMLRLQLR---PKSAKFVG-AKLAMDGLIFGPLDLIVFFSYMGFANGKDASEV 131
            F GP+ H     +    P      G  +L +D L+F P  L++FF  M F  GKDAS  
Sbjct: 89  FFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAF 148

Query: 132 KEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLS 179
              ++   +PA  +   VW  +Q  N  YVP+++++L+ NL  L   A+L+
Sbjct: 149 AAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLA 191

[Close]

BLAST of CmaCh05G013390 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 295.4 bits (755), Expect = 3.4e-80
Identity = 144/229 (62.88%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MFRLWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHL---------QTSD 60
           M +LW+WYQ CLT HPVKTQVISS  LWG GD+ AQY+THS AK  L           +D
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 61  AE--------KEFKINWKRVGITSMFGFGFVGPVGHM----------LRLQLRPKSAKFV 120
           AE         EFK+NWKRV ITSMFGFGFVGPVGH           L+L+  PKS +FV
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query: 121 GAKLAMDGLIFGPLDLIVFFSYMGFANGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVAN 180
            AK+AMDGLIFGP+DL+VFF+YMGFA GK+ +EVKE LKRD  PA  L G  WP++Q+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 181 FRYVPVRYQLLYVNLFCLLDSAFLSWFEQQNDAPWKQWFT-SFNPFNEK 202
           FRYVPV+YQLLYVN+FCL+DSAFLSW EQQ DA WKQWFT SF P  E+
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKER 229

[Close]

BLAST of CmaCh05G013390 vs. TAIR 10
Match: AT3G24570.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 271.2 bits (692), Expect = 6.8e-73
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 0


Query: 1   MFRLWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHL---------QTSD 60
           M +LW+WYQ CLT HPVKTQVISS  LWG GD+ AQY+THS AK  L           +D
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 61  AE--------KEFKINWKRVGITSMFGFGFVGPVGHMLRLQLR--PKSAKFVGAKLAMDG 120
           AE         EFK+NWKRV ITSM+       +   ++L+LR  PKS +FV AK+AMDG
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMY-----EGLDKFIKLKLRYVPKSTRFVAAKVAMDG 120

Query: 121 LIFGPLDLIVFFSYMGFANGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRY 180
           LIFGP+DL+VFF+YMGFA GK+ +EVKE LKRD  PA  L G  WP++Q+ANFRYVPV+Y
Sbjct: 121 LIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQY 180

Query: 181 QLLYVNLFCLLDSAFLSWFEQQNDAPWKQWFT-SFNPFNEK 202
           QLLYVN+FCL+DSAFLSW EQQ DA WKQWFT SF P  E+
Sbjct: 181 QLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKER 216

[Close]

BLAST of CmaCh05G013390 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-15
Identity = 48/185 (25.95%), Postives = 82/185 (44.32%), Query Frame = 0


Query: 6   KWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRVGI 65
           +WY   L  HP  T+ I++++++   D+ +Q +T             E     +  R   
Sbjct: 80  RWYLRKLESHPFMTKSITTSVIYMAADLTSQMIT------------MEPTGSFDLIRTAR 139

Query: 66  TSMFGFGFVGPVGHM----LRLQLRPKSAKFVGAKLAMDGLIFGPLDLIVFFSYMGFANG 125
            + FG  F+GP  H+    L   L  +       K+ M  ++FGP+   VF+SY     G
Sbjct: 140 MASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQG 199

Query: 126 KDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSWFE 185
           +++ E+   LKRD+ P        WP+     F+YVPV  Q L  +    + + +L++  
Sbjct: 200 ENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMA 252

Query: 186 QQNDA 187
            Q  A
Sbjct: 260 NQTKA 252

[Close]

BLAST of CmaCh05G013390 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13
Identity = 49/177 (27.68%), Postives = 84/177 (47.46%), Query Frame = 0


Query: 7   WYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRVGIT 66
           WY   +  HPV T+ ++S++++   D+++Q +    AKT  ++ D      +   R+G  
Sbjct: 76  WYLGMVKSHPVVTKSVTSSLIYIAADLSSQTI----AKTSSESYDL-----VRTARMG-- 135

Query: 67  SMFGFGFVGPVGHM---LRLQLRPKSAKFVG-AKLAMDGLIFGPLDLIVFFSYMGFANGK 126
             +G   +GP  H       +L PK        K+AM   I+GP+  ++FFS      G+
Sbjct: 136 -GYGLFVLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGE 195

Query: 127 DASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSW 180
             S +   LKRD+ PA       WP+     FR+ PV  Q L  N F  + + ++++
Sbjct: 196 RGSVILARLKRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTY 240

[Close]

BLAST of CmaCh05G013390 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-12
Identity = 44/177 (24.86%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 7   WYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSDAEKEFKINWKRVGIT 66
           WY   +   PV T+ ++S++++   D+++Q +  ++  ++            +  R    
Sbjct: 85  WYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSY------------DLVRTARM 144

Query: 67  SMFGFGFVGPVGHM---LRLQLRPKSAKFVG-AKLAMDGLIFGPLDLIVFFSYMGFANGK 126
             +G   +GP  H    L   L PK        K+AM   ++GP   +VFFS      G+
Sbjct: 145 GGYGLLILGPTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGE 204

Query: 127 DASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSW 180
           + SE+   LKRD+ P  +     WP+     F++ PV  Q L  N F  L + ++++
Sbjct: 205 NGSEIVARLKRDLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITY 249

The following BLAST results are available for this feature:

BLAST of CmaCh05G013390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4IPX8	1.0e-17	30.39	Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 /...	[more]
Q66GV0	5.2e-17	31.69	Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2	[more]
Q5BK62	2.0e-16	33.15	Protein Mpv17 OS=Rattus norvegicus OX=10116 GN=Mpv17 PE=2 SV=1	[more]
Q2KIN6	3.4e-16	32.78	Protein Mpv17 OS=Bos taurus OX=9913 GN=MPV17 PE=2 SV=1	[more]
Q9NR77	3.4e-16	29.24	Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3	[more]

BLAST of CmaCh05G013390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24570.1	3.4e-80	62.88	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT3G24570.2	6.8e-73	60.63	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	3.8e-15	25.95	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	2.7e-13	27.68	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G33905.1	5.2e-12	24.86	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 117..178 e-value: 5.9E-16 score: 58.4
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 1..200
None	No IPR available	PANTHER	PTHR11266:SF102	PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G013390.1	CmaCh05G013390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion