CmaCh05G013300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G013300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Arf-GAP domain-containing protein
Location	Cma_Chr05: 10064209 .. 10069390 (+)
RNA-Seq Expression	CmaCh05G013300
Synteny	CmaCh05G013300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCGAGTGAAGGAGGATGAGAAGAACGAACGGATTATTCGCGGTCTTCTGAAACTGCAGGAGAATCGCCGGTGCATCAACTGCAACAGCCTGGTACACTATTACTACCTTTCTCAGTGTTTTCTCGAACTAGATATCACGTAGCTTCACTCTATGAAGTTAAATATTCGTTTTGCTGTATTTAAATTCCAGTCGTTCTTTTGGCCTGTTCTTGATTTAGCTTCTTGAGATCTTAGTTCCATGAAAAGAAGTTAGAATGATCATTTAGAAGTCACAAGATCTTTGGTTGTAATTTTCACGTGAGATTCAATCAATTTTATTGAAACATTTGCAGGGACCACAGTACGTCTGCACAACTTTCTGGACGTTTGTTTGCACAACCTGTAGTGGAATACAGTAAGTGCATCTTTCTTATGTTTGGTTCTTGTATTTTCGATTTTTCCAAAGACGCGCAAATCAATGGTCATATATTTCATTAGTCTTATGGAGATACTTTCTTGTATCTTGTTCATTTAATTGATAAAAACTTATTTGATTTGACTAATCAAATAGCCGCGAGTTCACACACCGAGTAAAATCAGTATCAATGGCCAAATTTACTTCTCAAGAAGTTAGCGCTCTTCAAGAAGGAGGAAATCAGGTACATGCTGCACATACTTTCGTTTCTCAGAGATTCACCTTTACACTGTTAAGAATCATAATTTTCTTATATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTATTTTCAATTTCAAAGCGTGCAAAGGAAATTTACTTTAAAGAGTTGGATCCACAACGTCATTCTTTTCCTGACAGCAGGTCATTTTATTTTACTTTTTTATTATTATCTTTATTATTTTTAATGCTATACTATTATGTTAGTCCAAATGGATGTCGTTCTGAGAGAAACTTTTCCTTCCAGTAACGTTATGAGACTCAGAGACTTTATCAAGCATGTTTATGTGGACAGAAGATATAGTGGCGATAAAAATTTTGACAAGCCACCTAGGGGGAAATCGGTGAGGTGCCTCAAACCTTATTTTCTAATTTCTCTGAGATATATCTGAAGTTGAACGCAGTAACTTTTATCACTTCATTGTTTGAATGTTATTATTTTATTATGATTCTACACACAAAGTAATCTTAACAGAATTCATCTGTGATCTTATACAGGGTGAGAAAGAGGACTTTTATGAAGCCAGGAGAACAGATACGTATCAAGGTGGTTCTAGAAGCCCACCATATGAAGACCGCCGTTACAATGAAAAGTCTAGTCCTGGGGGAAGAAACTTTGATGAGAGAAGAAGTCCAGGGTCTGATCATGAAAATCGGCAGTTTGGTGATTTTCGGAGAAGTCCTGCTCGTCCTGAGGTTGTAAGTGATTGGCGTCGAGAAGATAGGTTTGGAAATGGTAAAAAAGTAGAAGATGGAAGATTATCTGATGGAGACTCAAAAATTGGAGGCAGGTCACCTGAGCGACCAAATGACCTGGATGCTTCCAGTCCCCCCATGGTGCGACCTGTTAGGGATATTTTGGGGGCGAACATATCCCCACTACGTGTAATTGAACCACCAAAAAGTAGTGGTACTAGCAAGGTTGCTGATAGCTCGGTGCATAAGCAGGTGAGATTTTCTTTCACAAACTTTTATATTCATTGCAATTATATATATGTTTCAGATTGATATTCTTATCATTTTACCCTTTCCCCTTTTATTTATGTTTATCTGCATGATATTTTCCATTAATTCCATTGTCATAACCTTTCGTCCTTCTGAGGACTGGTATCTGTCCATTTATTTGAGCTGCTGGGTTTAATATTGATATCATTTGGTCTGTTTCTTGTTATCTCAGTGAGAGCCTTTTCTATGACTGGTGTAAAGTTTATATATCTACCTAATTAGACGTTTTGGACTTCATTGTAACAAATATTACCAGGTTGTAAATAAAATGTGGGAGATTTAAGTTTACCATATTATAAGAGTAGGTGGAATGATTTAGATATTTATGCTCAGTACTCAATTCCCATGGAACTAGTTTTAGTTAGCTCCTCTTGTGAAATTGATTTATATATATCATCACATGATAGGGTTTTCACGTGAGAAACCTTCACATGCAGCAACTATGGATCCTCATTATCAATTTCAGGATTTTGATCTGTGCCTTACTCTGCCTCTCTTTTTTGCCATTCCCTCATAATATTGTGCTATTTGTTGCGAGCTTTTGTAACATGCTACTTGTGAACCTGTGGATGTTAACACATCAACTGCCATTCCATCTTTTAGTGATTGTTAGTAATTATTATTTTCCATTGCGTTTACTATTGTTCTCTCCCATTGTTTCTGGAGTAAATTGTATGTGAACTGACACCATTTATTATTTAAATTTCAGAGAACCGCTTCTTCCAGTAGCTTAGGGTCTATCAGTGAGAATGTCGTTGAAACTAAATTGGAACCTTCTGGAAGTTTAATTGATTTTGATGCAGAGCCTGAACCTATTACTTCAGCAGTTCCACAGCCACCACAAAGTTCTGCTCCACAATCTGTAACACACACAGCGAACTCTAAAAGCGACAACAATTGGGCCTCATTTGATGTTGCCCCTCAGGCACCTCCTGCTCCTGCTAATGTTGGCACATTAGAGTCTGTACTTTCCCAATTGTCAGTTTCAGGATCACATGCTGCTACTGGTGCTGTACCGACTGCACCGGTAGGCAACATGACAATGTTACCAACTGGTTTTTCTCCCTCTTTTGGATCAGGAGGGAACATTCATATGCCTCTTCCCTTTGCTGGCGGAGCACCTTCAGTTGCACCAGGGGCTGGCTTGTCAACATTTCCTCCATCAGGTGCTTCAGCAGCTGGCCCTTAATTGTACTTATGTTATTAGTCCATATTGCTAAAAATGCTTTTCATATTTTCTGGTGCAGGGCAATGGTCTAATATGCAGCCACAGACACATTCTTTATTTCCTGGTGGTAATTCTCAGTCTGTGGGTCAACAGTTTCCACCATCAATAGACAGATCCATCAATCACATGGTTCGGTTGTTGAAGACTTGCTTGCCTTTCTATTTTTCGATGGTATTTTGTTTAAAACAAACTTTATTCGTCTTATTTCTTCTGGTGATTTCTTGTAGCCATGGAATCCTTCACTCTCCGTTAACTCCCAAGGACCTCCAAGTAATCCAGCAGCACACACACCCCAAGATTTTTCGACTCCTCCGCAGGCTATAGCTTCTGGTGTACCACAAACTTCTGCACCCGAAGTAAAGCCAAGCGGGAGAAAAGAATTGCCAGCCGTAATTACTTTTCTCCCCTTATCTTTGGTGTCCCATTAAGTAATTATCTTTGGCTTGTGTTCATCTCCCTGCATTTTATTACAACTGACAAGTTTCCAATCATCTGCAGGATCTTTTTGCGTTTAATTACTCATCCTACCCTGCACCAGTTCCAGGGTGGCATACTGTTCCGCCACACCACATGGTATATGCAATGCCGTATAATTCTGCAACGGTATTCTTTCTGCCTACTATTGAGTTTGGTTTTTTCCTTTTGGGTATTTTCATAACGATATCCACGAACATTTGTGTCTCTAAACTTCATACACTTTTACAGCCCGTCCCAAGTTTTCCTCAATCTTCAACGTCTACAAATCCATTCGATCTCAGCCCCGAACAATCTCAGGTATGTTGATGTTAATTTTTACATTTGGCCTTCTTTAATTTATAAAGTTGGCTGTGTAATCTTGTCACAACTGGGTTAGAATATTGATCTGCTCCTTGTGCATGAATTCACACTTTAAAATTCTAGTACCTTAAATTCATGCCTACTGTTTTGTTAAACTTCCATACTTGCTTCTGTTAACTTTAATTTTTATTAGTTAATAAATTGAAGTATGCTAGATTTTTCTTGGTTTATTCACTTGTTAATTTAGTATCAAATCGATATTAAAGTATGCATCTTGTTCTTTATTTTCTTCAACAATTTTACACGGACCTGCATTCACTTTTTATGCAGTTTCCTTCCATGGCACCATTGCCAAATCCTGGGCAACCTGCATCAAATTTAACAACTACTCCCGGCTACGGTAATCATCCCACATCAACATGGATGCCACACCAGCCACCATCTAACTTACTGCACCCGCAGTTGCCTCCCCAGGCGCCACATCCATCTACAATGCCTTCAGGTAAAATGATCTCGTCCTTTTTAGCATGTACGCATTTAACATCTACAATGGTTGATGTTCTAAAATTCTGCTTTGATATCTTAGGGCCGCCTTATATGGGACAGCAAGTAGCCCAACCTTATAGGTAATTTGCTGTTTTCTTTTCATAATTTATGCATACTTGATAGGAAAATCTATTGCATGATAAAAATACTTTACATCTGTTTGGTAACCATTTGATTTTTTGTTTTTTGATGTTTGAAAATTAAGCTAATAACCAATACTTCCACCTATGAATATTCTTTGTTTTGGCATCATATCCGCTTTTAGTTTTGAAACCTAAACATAGTTTTTAAAAACATGTTTTTGTTTTTGGAGTTTAAGTTGAATGTTTTCTTAGGAAAGGCAAAAACTATGGTAACGAAATTGGGTGAAAATAAGCACGATTTTCAAAAACAAAAACCAAATACTTATCGAGTGGGACTGCACTTGCAAATACCAAATGAGTTTTTGCCATATGTTTCAGGCATCCAGGACTTAGCAACTACGGTCACGAGGGAGCCGCTCATATGTACACAGATATGGGCCAGCAGACAGCCGTTAGATTCTCAACACCCTCTACTCCGAACCCTTTCTCATCCACCACCGGAGGTAACCCATTTGGCTAGTGGGAGAATGGAATAG

mRNA sequence

ATGGCGAATCGAGTGAAGGAGGATGAGAAGAACGAACGGATTATTCGCGGTCTTCTGAAACTGCAGGAGAATCGCCGGTGCATCAACTGCAACAGCCTGGGACCACAGTACGTCTGCACAACTTTCTGGACGTTTGTTTGCACAACCTGTAGTGGAATACACCGCGAGTTCACACACCGAGTAAAATCAGTATCAATGGCCAAATTTACTTCTCAAGAAGTTAGCGCTCTTCAAGAAGGAGGAAATCAGCGTGCAAAGGAAATTTACTTTAAAGAGTTGGATCCACAACGTCATTCTTTTCCTGACAGCAGTAACGTTATGAGACTCAGAGACTTTATCAAGCATGTTTATGTGGACAGAAGATATAGTGGCGATAAAAATTTTGACAAGCCACCTAGGGGGAAATCGGGTGAGAAAGAGGACTTTTATGAAGCCAGGAGAACAGATACGTATCAAGGTGGTTCTAGAAGCCCACCATATGAAGACCGCCGTTACAATGAAAAGTCTAGTCCTGGGGGAAGAAACTTTGATGAGAGAAGAAGTCCAGGGTCTGATCATGAAAATCGGCAGTTTGGTGATTTTCGGAGAAGTCCTGCTCGTCCTGAGGTTGTAAGTGATTGGCGTCGAGAAGATAGGTTTGGAAATGGTAAAAAAGTAGAAGATGGAAGATTATCTGATGGAGACTCAAAAATTGGAGGCAGGTCACCTGAGCGACCAAATGACCTGGATGCTTCCAGTCCCCCCATGGTGCGACCTGTTAGGGATATTTTGGGGGCGAACATATCCCCACTACGTGTAATTGAACCACCAAAAAGTAGTGGTACTAGCAAGGTTGCTGATAGCTCGGTGCATAAGCAGAGAACCGCTTCTTCCAGTAGCTTAGGGTCTATCAGTGAGAATGTCGTTGAAACTAAATTGGAACCTTCTGGAAGTTTAATTGATTTTGATGCAGAGCCTGAACCTATTACTTCAGCAGTTCCACAGCCACCACAAAGTTCTGCTCCACAATCTGTAACACACACAGCGAACTCTAAAAGCGACAACAATTGGGCCTCATTTGATGTTGCCCCTCAGGCACCTCCTGCTCCTGCTAATGTTGGCACATTAGAGTCTGTACTTTCCCAATTGTCAGTTTCAGGATCACATGCTGCTACTGGTGCTGTACCGACTGCACCGGTAGGCAACATGACAATGTTACCAACTGGTTTTTCTCCCTCTTTTGGATCAGGAGGGAACATTCATATGCCTCTTCCCTTTGCTGGCGGAGCACCTTCAGTTGCACCAGGGGCTGGCTTGTCAACATTTCCTCCATCAGGGCAATGGTCTAATATGCAGCCACAGACACATTCTTTATTTCCTGGTGGTAATTCTCAGTCTGTGGGTCAACAGTTTCCACCATCAATAGACAGATCCATCAATCACATGCCATGGAATCCTTCACTCTCCGTTAACTCCCAAGGACCTCCAAGTAATCCAGCAGCACACACACCCCAAGATTTTTCGACTCCTCCGCAGGCTATAGCTTCTGGTGTACCACAAACTTCTGCACCCGAAGTAAAGCCAAGCGGGAGAAAAGAATTGCCAGCCGATCTTTTTGCGTTTAATTACTCATCCTACCCTGCACCAGTTCCAGGGTGGCATACTGTTCCGCCACACCACATGGTATATGCAATGCCGTATAATTCTGCAACGCCCGTCCCAAGTTTTCCTCAATCTTCAACGTCTACAAATCCATTCGATCTCAGCCCCGAACAATCTCAGTTTCCTTCCATGGCACCATTGCCAAATCCTGGGCAACCTGCATCAAATTTAACAACTACTCCCGGCTACGGTAATCATCCCACATCAACATGGATGCCACACCAGCCACCATCTAACTTACTGCACCCGCAGTTGCCTCCCCAGGCGCCACATCCATCTACAATGCCTTCAGGGCCGCCTTATATGGGACAGCAAGTAGCCCAACCTTATAGACAGCCGTTAGATTCTCAACACCCTCTACTCCGAACCCTTTCTCATCCACCACCGGAGGTAACCCATTTGGCTAGTGGGAGAATGGAATAG

Coding sequence (CDS)

ATGGCGAATCGAGTGAAGGAGGATGAGAAGAACGAACGGATTATTCGCGGTCTTCTGAAACTGCAGGAGAATCGCCGGTGCATCAACTGCAACAGCCTGGGACCACAGTACGTCTGCACAACTTTCTGGACGTTTGTTTGCACAACCTGTAGTGGAATACACCGCGAGTTCACACACCGAGTAAAATCAGTATCAATGGCCAAATTTACTTCTCAAGAAGTTAGCGCTCTTCAAGAAGGAGGAAATCAGCGTGCAAAGGAAATTTACTTTAAAGAGTTGGATCCACAACGTCATTCTTTTCCTGACAGCAGTAACGTTATGAGACTCAGAGACTTTATCAAGCATGTTTATGTGGACAGAAGATATAGTGGCGATAAAAATTTTGACAAGCCACCTAGGGGGAAATCGGGTGAGAAAGAGGACTTTTATGAAGCCAGGAGAACAGATACGTATCAAGGTGGTTCTAGAAGCCCACCATATGAAGACCGCCGTTACAATGAAAAGTCTAGTCCTGGGGGAAGAAACTTTGATGAGAGAAGAAGTCCAGGGTCTGATCATGAAAATCGGCAGTTTGGTGATTTTCGGAGAAGTCCTGCTCGTCCTGAGGTTGTAAGTGATTGGCGTCGAGAAGATAGGTTTGGAAATGGTAAAAAAGTAGAAGATGGAAGATTATCTGATGGAGACTCAAAAATTGGAGGCAGGTCACCTGAGCGACCAAATGACCTGGATGCTTCCAGTCCCCCCATGGTGCGACCTGTTAGGGATATTTTGGGGGCGAACATATCCCCACTACGTGTAATTGAACCACCAAAAAGTAGTGGTACTAGCAAGGTTGCTGATAGCTCGGTGCATAAGCAGAGAACCGCTTCTTCCAGTAGCTTAGGGTCTATCAGTGAGAATGTCGTTGAAACTAAATTGGAACCTTCTGGAAGTTTAATTGATTTTGATGCAGAGCCTGAACCTATTACTTCAGCAGTTCCACAGCCACCACAAAGTTCTGCTCCACAATCTGTAACACACACAGCGAACTCTAAAAGCGACAACAATTGGGCCTCATTTGATGTTGCCCCTCAGGCACCTCCTGCTCCTGCTAATGTTGGCACATTAGAGTCTGTACTTTCCCAATTGTCAGTTTCAGGATCACATGCTGCTACTGGTGCTGTACCGACTGCACCGGTAGGCAACATGACAATGTTACCAACTGGTTTTTCTCCCTCTTTTGGATCAGGAGGGAACATTCATATGCCTCTTCCCTTTGCTGGCGGAGCACCTTCAGTTGCACCAGGGGCTGGCTTGTCAACATTTCCTCCATCAGGGCAATGGTCTAATATGCAGCCACAGACACATTCTTTATTTCCTGGTGGTAATTCTCAGTCTGTGGGTCAACAGTTTCCACCATCAATAGACAGATCCATCAATCACATGCCATGGAATCCTTCACTCTCCGTTAACTCCCAAGGACCTCCAAGTAATCCAGCAGCACACACACCCCAAGATTTTTCGACTCCTCCGCAGGCTATAGCTTCTGGTGTACCACAAACTTCTGCACCCGAAGTAAAGCCAAGCGGGAGAAAAGAATTGCCAGCCGATCTTTTTGCGTTTAATTACTCATCCTACCCTGCACCAGTTCCAGGGTGGCATACTGTTCCGCCACACCACATGGTATATGCAATGCCGTATAATTCTGCAACGCCCGTCCCAAGTTTTCCTCAATCTTCAACGTCTACAAATCCATTCGATCTCAGCCCCGAACAATCTCAGTTTCCTTCCATGGCACCATTGCCAAATCCTGGGCAACCTGCATCAAATTTAACAACTACTCCCGGCTACGGTAATCATCCCACATCAACATGGATGCCACACCAGCCACCATCTAACTTACTGCACCCGCAGTTGCCTCCCCAGGCGCCACATCCATCTACAATGCCTTCAGGGCCGCCTTATATGGGACAGCAAGTAGCCCAACCTTATAGACAGCCGTTAGATTCTCAACACCCTCTACTCCGAACCCTTTCTCATCCACCACCGGAGGTAACCCATTTGGCTAGTGGGAGAATGGAATAG

Protein sequence

MANRVKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRYSGDKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPPYEDRRYNEKSSPGGRNFDERRSPGSDHENRQFGDFRRSPARPEVVSDWRREDRFGNGKKVEDGRLSDGDSKIGGRSPERPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSGTSKVADSSVHKQRTASSSSLGSISENVVETKLEPSGSLIDFDAEPEPITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVAPQAPPAPANVGTLESVLSQLSVSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGGNIHMPLPFAGGAPSVAPGAGLSTFPPSGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRSINHMPWNPSLSVNSQGPPSNPAAHTPQDFSTPPQAIASGVPQTSAPEVKPSGRKELPADLFAFNYSSYPAPVPGWHTVPPHHMVYAMPYNSATPVPSFPQSSTSTNPFDLSPEQSQFPSMAPLPNPGQPASNLTTTPGYGNHPTSTWMPHQPPSNLLHPQLPPQAPHPSTMPSGPPYMGQQVAQPYRQPLDSQHPLLRTLSHPPPEVTHLASGRME

Homology

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BLAST of CmaCh05G013300 vs. ExPASy Swiss-Prot
Match: Q8RXE7 (Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana OX=3702 GN=AGD14 PE=1 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-47
Identity = 157/437 (35.93%), Postives = 217/437 (49.66%), Query Frame = 0


Query: 1   MANRVKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHR 60
           M    +E+E+NE+IIRGL+KL  NRRCINCNSLGPQYVCTTFWTFVC  CSGIHREFTHR
Sbjct: 1   MMGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHR 60

Query: 61  VKSVSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDR 120
           VKSVSM+KFTS+EV  LQ GGNQRA+EIY K  D QR   P++SN  R+R+FIK+VYV +
Sbjct: 61  VKSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQK 120

Query: 121 RYSGDKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPP----YEDRRYNEKSSPGGRNF 180
           +Y+G  + DKP +            RR ++Y   S+SPP    YE+RRY +   P G   
Sbjct: 121 KYAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYDYQYEERRYGK--IPLGFT- 180

Query: 181 DERRSPGSDHENRQFGDFRRSPARPEVVSDWRREDRFGNGKKVEDGRLSDGDSKIGGRSP 240
              +S      + +   F  SP R    SD   ED+F N    ED      D  +     
Sbjct: 181 --GKSASVKGLHAKASSFVYSPGR---FSDHMFEDQFSN----EDSAPRASDYSVSSAGD 240

Query: 241 ERPNDLDASSPPMVRPVR--DILGANISPLRVIEPPKSSGTSKVADSSVHKQRTASSSSL 300
              +D+ + +       R      +N  P   + P +              QRT SS S+
Sbjct: 241 PFRSDIQSPNFQQEAEFRSPQFQHSNAPPSENLFPGR------------QHQRTTSSGSV 300

Query: 301 GSISENVVETKLEPSGSLIDFDAEPEPITSA--------VPQPPQSS-APQSVTHTANSK 360
            S+  N +  K   SG L +  +E    T +        VP   +S+ AP  +     + 
Sbjct: 301 RSVDSNFMSIKSYTSGGLGEAVSESRQNTGSQQGKTSNHVPLVAESTKAPIDLFQLPGAP 360

Query: 361 SDNNWASF--DVAPQAPPAPANVGTLESVLSQLSVSGSHAATGAVPTAPVGNMTMLPTGF 420
              +  +F   +AP++PP       L+      S + +++  G +   P    + L    
Sbjct: 361 VAQSVDTFQPSIAPRSPPV-----NLQQAPQTYSFTPANSFAGNLGQQPTSRPSELSAPK 405

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BLAST of CmaCh05G013300 vs. ExPASy Swiss-Prot
Match: P52594 (Arf-GAP domain and FG repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=AGFG1 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-10
Identity = 149/627 (23.76%), Postives = 236/627 (37.64%), Query Frame = 0


Query: 6   KEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFT--HRVKS 65
           K++EK+ +++R +  L  NR+C +C+  GP YV  T  +FVCT+CSG  R     HRVKS
Sbjct: 8   KQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKS 67

Query: 66  VSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRY- 125
           +SM  FT QE+  LQ+ GN+  K+I+    D +  + PD  +  ++++F++  Y  +R+ 
Sbjct: 68  ISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWY 127

Query: 126 ----------------SGDKNFD-------KPPRGKSGEKEDFYEARRTDTYQ----GGS 185
                           SG            KP +   G+        +    Q    G S
Sbjct: 128 VPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPTLHLNKGTPSQSPVVGRS 187

Query: 186 RSPPYEDRRYNEKSSPGGRNFDERRSPGSDHEN-RQFGDFRRSPARPEVVSDWRREDRFG 245
           +    E ++++  S  G   F       +   N   F  F    A+    +D+   D FG
Sbjct: 188 QGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFG 247

Query: 246 NGKKVEDGRLSDGDSKIGG-----RSPERPNDLDASSPPMVRPVRDILGANISPLRVIEP 305
                     S G S  GG      SP +P     S+             N +       
Sbjct: 248 Q---------SSGSSNFGGFPTASHSPFQPQTTGGSA----------ASVNANFAHFDNF 307

Query: 306 PKSSGTSKVADSSVHKQRTASSSSLGSISENVVETKLEPSGSLIDFD------------- 365
           PKSS       ++    +TAS+ S  S ++  ++T  +   +L + D             
Sbjct: 308 PKSSSADFGTFNTSQSHQTASAVSKVSTNKAGLQT-ADKYAALANLDNIFSAGQGGDQGS 367

Query: 366 ----AEPEPITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVAPQAPPAPANVGTLESV 425
                   P+ S V  P QSSA  S  + A ++ D+ ++S   +  A  + +N  +    
Sbjct: 368 GFGTTGKAPVGSVVSVPSQSSA-SSDKYAALAELDSVFSSAATSSNAYTSTSNASS---- 427

Query: 426 LSQLSVSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGGNIHMPLPFAGGAPSVAPGAGL 485
               +V G+     +  T P  +    P G +PS           PF   A    P    
Sbjct: 428 ----NVFGTVPVVASAQTQPASSSVPAPFGATPSTN---------PFVAAA---GPSVAS 487

Query: 486 STFPPSGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRSINHMPWNPSLSVNSQGPPSNP 545
           ST P     +N +  T + F G  S S+   F                    +  P S P
Sbjct: 488 STNPFQ---TNARGATAATF-GTASMSMPTGF-------------------GTPAPYSLP 547

Query: 546 AAHTPQDFSTPPQAIASGVPQTSAPEVKPSGRKELPADLFAFNYSSYPAPVPGWHTVPPH 580
            + +   F  P     +  PQ +A   +P+G     A   AF  +  P   P        
Sbjct: 548 TSFS-GSFQQPAFPAQAAFPQQTAFSQQPNG-----AGFAAFGQTK-PVVTPFGQVAAAG 561

[Close]

BLAST of CmaCh05G013300 vs. ExPASy Swiss-Prot
Match: Q4KLH5 (Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-10
Identity = 152/629 (24.17%), Postives = 234/629 (37.20%), Query Frame = 0


Query: 6   KEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFT--HRVKS 65
           K++EK+ +++R +  L  NR+C +C+  GP YV  T  +FVCT+CSG  R     HRVKS
Sbjct: 8   KQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKS 67

Query: 66  VSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRY- 125
           +SM  FT QE+  LQ+ GN+  K+I+    D +  + PD  +  ++++F++  Y  +R+ 
Sbjct: 68  ISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWY 127

Query: 126 ----------------SGDKNFD-------KPPRGKSGEKEDFYEARRTDTYQ----GGS 185
                           SG            KP +   GE        +    Q    G S
Sbjct: 128 VPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKGTPTQSPVVGRS 187

Query: 186 RSPPYEDRRYNEKSSPGGRNFDERRSPGSDHEN-RQFGDFRRSPARPEVVSDWRREDRFG 245
           +    E ++++  S  G   F       +   N   F  F    A+    +++   D FG
Sbjct: 188 QGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANAEFANFDAFG 247

Query: 246 NGKKVEDGRLSDGDSKIGG-----RSPERPNDLDASSPPMVRPVRDILGANISPLRVIEP 305
                     S G S  GG      SP +P     S+             N +       
Sbjct: 248 Q---------SSGSSNFGGFPTASHSPFQPQTTGGSAG----------SVNANFAHFDNF 307

Query: 306 PKSSGTSKVADSSVHKQRTASSSSLGSISENVVETKLEPSGSLIDFD------------- 365
           PKSS     + S+    +TAS+ S  S ++  ++T  +   +L + D             
Sbjct: 308 PKSSSADFGSFSTSQSHQTASTVSKVSTNKAGLQT-ADKYAALANLDNIFSAGQGGDQGS 367

Query: 366 ----AEPEPITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVAPQAPPAPANVGTLESV 425
                   P+ S V  P  SSA  S  + A ++ D+ ++S   +  A  + +N  +    
Sbjct: 368 GFGTTGKAPVGSVVSVPSHSSA-SSDKYAALAELDSVFSSAATSNNAYTSTSNASS---- 427

Query: 426 LSQLSVSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGGNIHMPLPFAGGAPSVAPGAGL 485
               SV G+    GA P     +    P G +PS           PF     +  P A  
Sbjct: 428 ----SVFGT-VPVGASPQTQPASSGPAPFGATPSTN---------PFVA---ATGPSAAS 487

Query: 486 STFPPSGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRSINHMPWNPSLSVNSQGPPSNP 545
           ST P     +N +  T + F G  S S+   F      S+       S S + Q PP   
Sbjct: 488 STNPFQ---TNARGATAATF-GTASMSMPAGFGTPAQYSL-----PTSFSGSFQQPPFPA 547

Query: 546 AAHTPQD--FSTPPQAIASGVPQTSAPEVKPSGRKELPADLFAFNYSSYPAPVPGWHTVP 580
            A  PQ   FS  P          + P V P G+                          
Sbjct: 548 QAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQVAAAG--------------------- 560

[Close]

BLAST of CmaCh05G013300 vs. ExPASy Swiss-Prot
Match: Q2TA45 (Arf-GAP domain and FG repeat-containing protein 1 OS=Bos taurus OX=9913 GN=AGFG1 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.0e-09
Identity = 147/622 (23.63%), Postives = 235/622 (37.78%), Query Frame = 0


Query: 6   KEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFT--HRVKS 65
           K++EK+ +++R +  L  NR+C +C+  GP YV  T  +FVCT+CSG  R     HRVKS
Sbjct: 8   KQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKS 67

Query: 66  VSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRY- 125
           +SM  FT QE+  LQ+ GN+  K+I+    D +  + PD  +  ++++F++  Y  +R+ 
Sbjct: 68  ISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWY 127

Query: 126 ----------------SGDKNFD-------KPPRGKSGEKEDFYEARRTDTYQ----GGS 185
                           SG            KP +   G+        +    Q    G S
Sbjct: 128 VPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPALHLNKGTPSQSPVVGRS 187

Query: 186 RSPPYEDRRYNEKSSPGGRNFDERRSPGSDHEN-RQFGDFRRSPARPEVVSDWRREDRFG 245
           ++   E ++++  S  G   F       +   N   F  F    A+    +D+   D FG
Sbjct: 188 QAQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFG 247

Query: 246 NGKKVEDGRLSDGDSKIGGRSPERPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSG 305
                     S G S  GG      +      P         + AN +       PKSS 
Sbjct: 248 Q---------SSGSSNFGGFPTASHSSF---QPQTTGGSAGSVNANFAHFDNF--PKSSS 307

Query: 306 TSKVADSSVHKQRTASSSSLGSISENVVETKLEPSGSLIDFD-----------------A 365
                 ++    +TAS+ S  S ++  ++T  +   +L + D                  
Sbjct: 308 ADFGTFNTSQSHQTASAVSKVSANKAGLQT-TDKYAALANLDNIFSAGQGGDQGSGFGTT 367

Query: 366 EPEPITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVAPQAPPAPANVGTLESVLSQLS 425
              P+ S V  P QSSA  S  + A ++ D+ ++S   +  A  + +N  +        +
Sbjct: 368 GKAPVGSVVSVPSQSSA-SSDKYAALAELDSVFSSAATSSNAYTSTSNASS--------N 427

Query: 426 VSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGGNIHMPLPFAGGAPSVAPGAGLSTFPP 485
           V G+     +  T P  +    P G +PS           PF   A    P    ST P 
Sbjct: 428 VFGTVPVGASAQTQPASSSVPAPFGATPSTN---------PFVAAA---GPSVASSTNPF 487

Query: 486 SGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRSINHMPWNPSLSVNSQGPPSNPAAHTP 545
               +N +  T + F G  S S+   F                    +  P S P + + 
Sbjct: 488 Q---TNARGATAATF-GTASMSMPAGF-------------------GTPAPYSLPTSFS- 547

Query: 546 QDFSTPPQAIASGVPQTSAPEVKPSGRKELPADLFAFNYSSYPAPVPGWHTVPPHHMVYA 580
             F  P     +  PQ +A   +P+G     A   AF  +  P   P          V +
Sbjct: 548 GSFQQPAFPAQAAFPQQTAFSQQPNG-----AGFAAFGQTK-PVVTPFGQVGAAG--VSS 561

[Close]

BLAST of CmaCh05G013300 vs. ExPASy Swiss-Prot
Match: Q8K2K6 (Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-07
Identity = 153/622 (24.60%), Postives = 234/622 (37.62%), Query Frame = 0


Query: 6   KEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFT--HRVKS 65
           K++EK+ +++R +  L  NR+C +C+  GP YV  T  +FVCT+CSG  R     HRVKS
Sbjct: 8   KQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHRVKS 67

Query: 66  VSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRY- 125
           +SM  FT QE+  LQ+ GN+  K+I+    D +  + PD  +  ++++F++  Y  +R+ 
Sbjct: 68  ISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWY 127

Query: 126 ----------------SGDKNFD-------KPPRGKSGEKEDFYEARRTDTYQ----GGS 185
                           SG            KP +   GE        +    Q    G S
Sbjct: 128 VPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKGTPSQSPVVGRS 187

Query: 186 RSPPYEDRRYNEKSSPGGRNFDERRSPGSDHEN-RQFGDFRRSPARPEVVSDWRREDRFG 245
           +    E ++++  S  G   F       +   N   F  F    A+    +D+   D FG
Sbjct: 188 QGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFG 247

Query: 246 NGKKVEDGRLSDGDSKIGGRSPERPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSG 305
                     S G S  GG      +      P         + AN +       PKSS 
Sbjct: 248 Q---------SSGSSNFGGFPTASHSSF---QPQTTGGSAGSVNANFAHFDNF--PKSSS 307

Query: 306 TSKVADSSVHKQRTASSSSLGSISENVVETKLEPSGSLIDFD-----------------A 365
                 S+    +TAS+ S  S ++  ++T  +   +L + D                  
Sbjct: 308 ADFGTFSTSQSHQTASTVSKVSTNKAGLQT-ADKYAALANLDNIFSAGQGGDQGSGFGTT 367

Query: 366 EPEPITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVAPQAPPAPANVGTLESVLSQLS 425
              P+ S V  P  SSA  S  + A ++ D+ ++S   +  A    +N  +  SV   + 
Sbjct: 368 GKAPVGSVVSVPSHSSA-SSDKYAALAELDSVFSSAATSSNAYTPTSNASS--SVFGTVP 427

Query: 426 VSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGGNIHMPLPFAGGAPSVAPGAGLSTFPP 485
           V G+ A T    + P       P G +PS           PF     +  P A  ST P 
Sbjct: 428 V-GASAQTQPASSGPA------PFGATPSTN---------PFVA---ATGPSAASSTNPF 487

Query: 486 SGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRSINHMPWNPSLSVNSQGPPSNPAAHTP 545
               +N +  T + F G  S S+   F           P   SL  +  G    PA    
Sbjct: 488 Q---TNARGATAATF-GTASMSMPAGF---------GTPAQYSLPTSFSGSFQQPA---- 547

Query: 546 QDFSTPPQAIASGVPQTSAPEVKPSGRKELPADLFAFNYSSYPAPVPGWHTVPPHHMVYA 580
                P QA     PQ +A   +P+G        FA    + P   P          V +
Sbjct: 548 ----FPAQA---AFPQQTAFSQQPNGAG------FATFGQTKPVVTPFGQVAAAG--VSS 560

[Close]

BLAST of CmaCh05G013300 vs. TAIR 10
Match: AT4G13350.1 (NSP (nuclear shuttle protein)-interacting GTPase )

HSP 1 Score: 447.6 bits (1150), Expect = 1.8e-125
Identity = 317/685 (46.28%), Postives = 378/685 (55.18%), Query Frame = 0


Query: 1   MANRVKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHR 60
           MA RVKEDEKNE+IIR LLKL EN+RCINCNSLGPQYVCTTFWTFVCT CSGIHREFTHR
Sbjct: 1   MAGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHR 60

Query: 61  VKSVSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDR 120
           VKS+SMAKFTSQEV+AL+EGGNQ AK+IYFK LD QR S PD SNV RLRDFI+HVYV++
Sbjct: 61  VKSISMAKFTSQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNK 120

Query: 121 RYSGDKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPPYE---DRRYNEKSSPGGRNFD 180
           RY+ +KN DK P           E R +     GSRSPPYE   DRRY ++SSPGG    
Sbjct: 121 RYTNEKNDDKSPS----------ETRSS----SGSRSPPYEDGYDRRYGDRSSPGG---- 180

Query: 181 ERRSPGSDHENRQFGDFRRSPARPEVVSDWRREDRFGNGKKVEDGRLSDGDSKIGGRSPE 240
             RSPG +  +R   + R+SPARPE+++DWRREDRFG  K  E+          G +SPE
Sbjct: 181 --RSPGFETGSRNAVNNRKSPARPEILNDWRREDRFGGRKTSEE----------GSQSPE 240

Query: 241 RPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSGTSKVADSSVHKQRTASSSSLGSI 300
           +  DL ++SPP+ RPVR+ILG ++ PLRV EPPK    S+  D+S H +   S SSL S 
Sbjct: 241 QVKDLGSASPPVARPVREILGDSVIPLRVGEPPKPP-VSRNTDASAHAKSGTSLSSLMST 300

Query: 301 SENVVETKLEPSGSLIDFDAEPE-PITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVA 360
           +E   E KLE + SLIDFD + E P  S   Q P S+  Q       S +D NWASFD A
Sbjct: 301 NEKPPEVKLETALSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSND-NWASFDAA 360

Query: 361 PQAP-----PAPANVGTLESVLSQLSVSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGG 420
           P AP       P +  TL+S+LSQL+V+ S                              
Sbjct: 361 PSAPSLNVSQPPPSGNTLDSLLSQLAVTSS------------------------------ 420

Query: 421 NIHMPLPFAGGAPSVAPGAGLSTFPPSGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRS 480
                           PG               Q  T S  P     S  Q F P  +  
Sbjct: 421 ---------------VPG---------------QASTPSNGPVNLGHSTSQIFAPFQNEH 480

Query: 481 INHMPWNPSLSVNSQGPPSNPAAHTPQDFSTPPQAIASGVPQTSAPEVKPSGRKELPADL 540
            +  PWN +L+ N Q   S P+         P Q + SG  Q+S  EVKPSGR ELPADL
Sbjct: 481 SSEQPWNTALASNVQRSMSAPSLQ-------PLQGVPSGGLQSS--EVKPSGRSELPADL 540

Query: 541 FAFNYSSYPAPVPGWHTVPPHHMVYAM-PYNSATPVPSFPQSSTSTNPFDLSP------- 600
           FA NY SY APVPGW   PPH M Y M  YN+  P  + PQ   S NPFD SP       
Sbjct: 541 FAVNYPSYHAPVPGWQAGPPHAMHYGMQQYNNPVPYQNVPQPGKSMNPFDFSPGPPSQTQ 563

Query: 601 EQSQFPSMAPLPNPGQPASNLTTTPGYGNHPTSTWMPHQPPSNLLHPQLPPQ-APHPSTM 660
            ++ FPSMAPL                G  P S  MP Q   N  +  +P Q + HPS M
Sbjct: 601 TENMFPSMAPL---------------QGALPPSGMMPSQGVHNQFN--IPSQGSAHPSAM 563

Query: 661 PSGPPYMGQQVAQPYRQPLDSQHPL 668
           P  P YM  Q+  P   P  + +P+
Sbjct: 661 P--PRYMPSQI--PGSMPPSNVNPI 563

[Close]

BLAST of CmaCh05G013300 vs. TAIR 10
Match: AT4G13350.2 (NSP (nuclear shuttle protein)-interacting GTPase )

HSP 1 Score: 447.6 bits (1150), Expect = 1.8e-125
Identity = 317/685 (46.28%), Postives = 378/685 (55.18%), Query Frame = 0


Query: 1   MANRVKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHR 60
           MA RVKEDEKNE+IIR LLKL EN+RCINCNSLGPQYVCTTFWTFVCT CSGIHREFTHR
Sbjct: 1   MAGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHR 60

Query: 61  VKSVSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDR 120
           VKS+SMAKFTSQEV+AL+EGGNQ AK+IYFK LD QR S PD SNV RLRDFI+HVYV++
Sbjct: 61  VKSISMAKFTSQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNK 120

Query: 121 RYSGDKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPPYE---DRRYNEKSSPGGRNFD 180
           RY+ +KN DK P           E R +     GSRSPPYE   DRRY ++SSPGG    
Sbjct: 121 RYTNEKNDDKSPS----------ETRSS----SGSRSPPYEDGYDRRYGDRSSPGG---- 180

Query: 181 ERRSPGSDHENRQFGDFRRSPARPEVVSDWRREDRFGNGKKVEDGRLSDGDSKIGGRSPE 240
             RSPG +  +R   + R+SPARPE+++DWRREDRFG  K  E+          G +SPE
Sbjct: 181 --RSPGFETGSRNAVNNRKSPARPEILNDWRREDRFGGRKTSEE----------GSQSPE 240

Query: 241 RPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSGTSKVADSSVHKQRTASSSSLGSI 300
           +  DL ++SPP+ RPVR+ILG ++ PLRV EPPK    S+  D+S H +   S SSL S 
Sbjct: 241 QVKDLGSASPPVARPVREILGDSVIPLRVGEPPKPP-VSRNTDASAHAKSGTSLSSLMST 300

Query: 301 SENVVETKLEPSGSLIDFDAEPE-PITSAVPQPPQSSAPQSVTHTANSKSDNNWASFDVA 360
           +E   E KLE + SLIDFD + E P  S   Q P S+  Q       S +D NWASFD A
Sbjct: 301 NEKPPEVKLETALSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSND-NWASFDAA 360

Query: 361 PQAP-----PAPANVGTLESVLSQLSVSGSHAATGAVPTAPVGNMTMLPTGFSPSFGSGG 420
           P AP       P +  TL+S+LSQL+V+ S                              
Sbjct: 361 PSAPSLNVSQPPPSGNTLDSLLSQLAVTSS------------------------------ 420

Query: 421 NIHMPLPFAGGAPSVAPGAGLSTFPPSGQWSNMQPQTHSLFPGGNSQSVGQQFPPSIDRS 480
                           PG               Q  T S  P     S  Q F P  +  
Sbjct: 421 ---------------VPG---------------QASTPSNGPVNLGHSTSQIFAPFQNEH 480

Query: 481 INHMPWNPSLSVNSQGPPSNPAAHTPQDFSTPPQAIASGVPQTSAPEVKPSGRKELPADL 540
            +  PWN +L+ N Q   S P+         P Q + SG  Q+S  EVKPSGR ELPADL
Sbjct: 481 SSEQPWNTALASNVQRSMSAPSLQ-------PLQGVPSGGLQSS--EVKPSGRSELPADL 540

Query: 541 FAFNYSSYPAPVPGWHTVPPHHMVYAM-PYNSATPVPSFPQSSTSTNPFDLSP------- 600
           FA NY SY APVPGW   PPH M Y M  YN+  P  + PQ   S NPFD SP       
Sbjct: 541 FAVNYPSYHAPVPGWQAGPPHAMHYGMQQYNNPVPYQNVPQPGKSMNPFDFSPGPPSQTQ 563

Query: 601 EQSQFPSMAPLPNPGQPASNLTTTPGYGNHPTSTWMPHQPPSNLLHPQLPPQ-APHPSTM 660
            ++ FPSMAPL                G  P S  MP Q   N  +  +P Q + HPS M
Sbjct: 601 TENMFPSMAPL---------------QGALPPSGMMPSQGVHNQFN--IPSQGSAHPSAM 563

Query: 661 PSGPPYMGQQVAQPYRQPLDSQHPL 668
           P  P YM  Q+  P   P  + +P+
Sbjct: 661 P--PRYMPSQI--PGSMPPSNVNPI 563

[Close]

BLAST of CmaCh05G013300 vs. TAIR 10
Match: AT4G32630.1 (ArfGap/RecO-like zinc finger domain-containing protein )

HSP 1 Score: 214.2 bits (544), Expect = 3.4e-55
Identity = 171/420 (40.71%), Postives = 233/420 (55.48%), Query Frame = 0


Query: 5   VKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHRVKSV 64
           +KEDE+ E+ IR LLKL ENRRCINCNSLGPQYVC+TFWTFVC  CSGIHREFTHRVKSV
Sbjct: 1   MKEDERTEKAIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSV 60

Query: 65  SMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRYSG 124
           SMAKFT+ EVSAL+ GGN+RA++IYFKE D  R  +PD SN+ +LRDFI+ VYVD+RYS 
Sbjct: 61  SMAKFTADEVSALRAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYSS 120

Query: 125 DKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPPYEDRRYNEKSSPGGRN--------F 184
               DK  + KS   ED+ E+++T  +  GSRS    D+   E+SS  GR+        F
Sbjct: 121 S---DKISQQKSDVTEDYRESKKTSAHVLGSRSLHSVDKSDIERSSAAGRSGSESLRFYF 180

Query: 185 DER--RSPGSDHENRQFGDFRRSPARPEVVSDWRREDRFGNGKKVEDGRLSDGDSKIGGR 244
           D++  +     H  R  G   +SP R E+V D  R+D  G+ K+ +  + S G SK    
Sbjct: 181 DDKNHKQQHVTHNPRSRG-LPKSPIRFEIVDDRFRDD--GSVKRYDARKDSRGSSK---- 240

Query: 245 SPERPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSGTSKVADSSVHKQRTASSSSL 304
           S +  ++ D  S P+VR        + S L +++  K           V+ Q TASS  +
Sbjct: 241 SLDLSSNKDMPSFPIVR--------HTSELNIVKVEKKK-------DPVNNQMTASSEKM 300

Query: 305 ---GSISENVVETKLEPSGSLIDFDAEPEPI-TSAVPQPPQ-------SSAPQSVTHTAN 364
               S+ ++V  ++L   G + +    P  + T+  P P         SS P  V  T N
Sbjct: 301 EIPRSLIDDVPVSELSDEGIIKNSSEIPASLKTTEEPAPNSLEALLFGSSVPSVVPGTNN 360

Query: 365 SKSDNNWASFDVAPQAPPAPANVGTL------ESVLS-QLSVSGSHAATGA----VPTAP 393
            +    W + D++        N+GT       +SV S   S + +HA +G+    VP AP
Sbjct: 361 YEL---WNTSDISSTENYTAVNLGTQTMPGIPDSVTSFATSPTTAHAHSGSSGPVVPVAP 392

[Close]

BLAST of CmaCh05G013300 vs. TAIR 10
Match: AT1G08680.3 (ARF GAP-like zinc finger-containing protein ZIGA4 )

HSP 1 Score: 206.8 bits (525), Expect = 5.4e-53
Identity = 102/171 (59.65%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 1   MANRVKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHR 60
           M    +E+E+NE+IIRGL+KL  NRRCINCNSLGPQYVCTTFWTFVC  CSGIHREFTHR
Sbjct: 1   MMGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHR 60

Query: 61  VKSVSMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDR 120
           VKSVSM+KFTS+EV  LQ GGNQRA+EIY K  D QR   P++SN  R+R+FIK+VYV +
Sbjct: 61  VKSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQK 120

Query: 121 RYSGDKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPP----YEDRRYNE 168
           +Y+G  + DKP +            RR ++Y   S+SPP    YE+RRY +
Sbjct: 121 KYAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYDYQYEERRYGK 171

[Close]

BLAST of CmaCh05G013300 vs. TAIR 10
Match: AT4G32630.2 (ArfGap/RecO-like zinc finger domain-containing protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-51
Identity = 227/682 (33.28%), Postives = 317/682 (46.48%), Query Frame = 0


Query: 5   VKEDEKNERIIRGLLKLQENRRCINCNSLGPQYVCTTFWTFVCTTCSGIHREFTHRVKSV 64
           +KEDE+ E+ IR LLKL ENRRCINCNSLGPQYVC+TFWTFVC  CSGIHREFTHRVKSV
Sbjct: 1   MKEDERTEKAIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSV 60

Query: 65  SMAKFTSQEVSALQEGGNQRAKEIYFKELDPQRHSFPDSSNVMRLRDFIKHVYVDRRYSG 124
           SMAKFT+ EVSAL+ GGN+RA++IYFKE D  R  +PD SN+ +LRDFI+ VYVD+RYS 
Sbjct: 61  SMAKFTADEVSALRAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYSS 120

Query: 125 DKNFDKPPRGKSGEKEDFYEARRTDTYQGGSRSPPYEDRRYNEKSSPGGRN--------F 184
               DK  + KS   ED+ E+++T  +  GSRS    D+   E+SS  GR+        F
Sbjct: 121 S---DKISQQKSDVTEDYRESKKTSAHVLGSRSLHSVDKSDIERSSAAGRSGSESLRFYF 180

Query: 185 DER--RSPGSDHENRQFGDFRRSPARPEVVSDWRREDRFGNGKKVEDGRLSDGDSKIGGR 244
           D++  +     H  R  G   +SP R E+V D  R+D  G+ K+ +  + S G SK    
Sbjct: 181 DDKNHKQQHVTHNPRSRG-LPKSPIRFEIVDDRFRDD--GSVKRYDARKDSRGSSK---- 240

Query: 245 SPERPNDLDASSPPMVRPVRDILGANISPLRVIEPPKSSGTSKVADSSVHKQRTASSSSL 304
           S +  ++ D  S P+VR        + S L +++  K           V+ Q TASS  +
Sbjct: 241 SLDLSSNKDMPSFPIVR--------HTSELNIVKVEKKK-------DPVNNQMTASSEKM 300

Query: 305 ---GSISENVVETKLEPSGSLIDFDAEPEPI-TSAVPQPPQ-------SSAPQSVTHTAN 364
               S+ ++V  ++L   G + +    P  + T+  P P         SS P  V  T N
Sbjct: 301 EIPRSLIDDVPVSELSDEGIIKNSSEIPASLKTTEEPAPNSLEALLFGSSVPSVVPGTNN 360

Query: 365 SKSDNNWASFDVAPQAPPAPANVGTLESVLSQLSVSGSHAATGAVPTAPVGNMTMLPTGF 424
            +    W + D++        N+G                 T  +P  P  ++T   T  
Sbjct: 361 YEL---WNTSDISSTENYTAVNLG-----------------TQTMPGIP-DSVTSFATSP 420

Query: 425 SPSFGSGGNIHMPLPFAGGAPSVAPGAGLSTFPPSGQWSNMQPQTHSLFPGGNSQSVGQQ 484
           + +    G+       +G    VAP   L+T            +T +L            
Sbjct: 421 TTAHAHSGS-------SGPVVPVAPD-NLNT-----------KETATL------------ 480

Query: 485 FPPSIDRSINHMPWNPSLSVNSQGPPSNPAAHTPQDFSTPPQAIASGVPQTSAPEVKPSG 544
                               N+QGP       T    +     + S   Q    E + S 
Sbjct: 481 -------------------ANNQGPSDFSMEQTTLAITDYAHGVGSEHHQDD--ETQSSI 540

Query: 545 RKELPADLFAFNYSSYPAPVPGWHTVPPHHMVYAMPYNS--ATPVPSFPQSSTSTNPFDL 604
           RK LP DLF   +S  P  V G H    H M Y M Y       + +   ++ + NPFDL
Sbjct: 541 RKALPEDLFTGGFSFAPQQVHGQH----HGMGYGMQYYQYPVQAMGALTYTAKAANPFDL 576

Query: 605 S-----PEQS-QFPSMAPLPNPGQPASNLTTTPGYGNHPTST-----WMPHQPPSNLLHP 653
           S     P Q+ QFP+MA +   G P  ++++  GY +  +        M  Q P +    
Sbjct: 601 SYDDTAPNQTPQFPTMAYVQGGGLP--HVSSPIGYSDSSSPAADSIGLMTSQSPFHA--T 576

The following BLAST results are available for this feature:

BLAST of CmaCh05G013300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXE7	1.5e-47	35.93	Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis ...	[more]
P52594	2.5e-10	23.76	Arf-GAP domain and FG repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=AGF...	[more]
Q4KLH5	9.4e-10	24.17	Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 ...	[more]
Q2TA45	8.0e-09	23.63	Arf-GAP domain and FG repeat-containing protein 1 OS=Bos taurus OX=9913 GN=AGFG1...	[more]
Q8K2K6	1.2e-07	24.60	Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Ag...	[more]

BLAST of CmaCh05G013300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13350.1	1.8e-125	46.28	NSP (nuclear shuttle protein)-interacting GTPase	[more]
AT4G13350.2	1.8e-125	46.28	NSP (nuclear shuttle protein)-interacting GTPase	[more]
AT4G32630.1	3.4e-55	40.71	ArfGap/RecO-like zinc finger domain-containing protein	[more]
AT1G08680.3	5.4e-53	59.65	ARF GAP-like zinc finger-containing protein ZIGA4	[more]
AT4G32630.2	1.7e-51	33.28	ArfGap/RecO-like zinc finger domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001164	Arf GTPase activating protein	PRINTS	PR00405	REVINTRACTNG	coord: 43..60 score: 37.55 coord: 24..43 score: 29.14 coord: 61..82 score: 31.5
IPR001164	Arf GTPase activating protein	SMART	SM00105	arf_gap_3	coord: 12..130 e-value: 6.0E-15 score: 65.7
IPR001164	Arf GTPase activating protein	PFAM	PF01412	ArfGap	coord: 13..123 e-value: 6.4E-26 score: 90.7
IPR001164	Arf GTPase activating protein	PROSITE	PS50115	ARFGAP	coord: 12..130 score: 16.780931
IPR038508	ArfGAP domain superfamily	GENE3D	1.10.220.150	Arf GTPase activating protein	coord: 1..130 e-value: 6.2E-36 score: 125.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 566..652
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 664..687
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 626..644
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 440..516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 566..624
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 440..523
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..237
None	No IPR available	PANTHER	PTHR46085:SF3	OS02G0208900 PROTEIN	coord: 1..658
None	No IPR available	CDD	cd08838	ArfGap_AGFG	coord: 12..122 e-value: 7.24872E-64 score: 205.121
IPR044820	ADP-ribosylation factor GTPase-activating protein AGD14-like	PANTHER	PTHR46085	ARFGAP/RECO-RELATED	coord: 1..658
IPR037278	ARFGAP/RecO-like zinc finger	SUPERFAMILY	57863	ArfGap/RecO-like zinc finger	coord: 11..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G013300.1	CmaCh05G013300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0009615	response to virus
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding