CmaCh05G012930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G012930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor WIN1-like
Location	Cma_Chr05: 9852901 .. 9854627 (+)
RNA-Seq Expression	CmaCh05G012930
Synteny	CmaCh05G012930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTCTCTCCTCCCTCTTTCTCTCTCTTTGTGGGAGAGACAAGAGACAGAAGCTTGGACAAAATCATGGCGCCATCAAAGAAGTTTAGAGGCGTTAGGCAACGACACTGGGGATCTTGGGTCTCCGAAATTCGCCACCCTCTTCTGTAAGTTTCCGAACCCACCATTGAAGACCTCTCTCTCGTCTTGAATCTATAAGTTTACGCAGATGGGTCATTATATTCTTTACCTCGGTATCTCTCGTTCAATCTTAAAGTTTAAGTAGATGGGTCATGTTATTATTTACTCCAGTCTCCCTCGTTGAATCTTATTATTGTTTACTTCAGTCTCTCTCGTTGAATCTAAAAGTTTAAGTAGATGGGTCATGATATTGTTTATCTCGATCTCTCTTGTTGAATCTAAAATTTTAAATAGATGGTCATGATATTATTTACCTCGGTCTCTCGTTGAATCTAAAAGTTTAAGAAAATGGGTCATGATATTGTTTACCTCAATCTCTCTTGTTGAATCGTAAAGTTTAAGCATATGAGTCATGATATCTCGTTGAATCTTAAAGTTTAAGCAAACAAGTCATTATATTATTAACCTCGATCTCTCAAATAACGAAATATTTAAATGTTACGTTTGATACTCATTAGGGTTTCACATTTTTATGAATTCTTAGCTAAATTTCAAAATTAAAATAGTTTTTTTAATTCGGTTTATTTTGAATTAAAAGAATAGGTTTAAATTAGGTTGAATAATGAAAATTTAAAAGTAATGCTTCAAAAGCTCTGAATAGGGTTTTCGTGTTCGGGTTTGGATTGTGAGGTCTAGTACACATGCCTACCAAGTTTTTTTTTTACCTTATTTTAGTTAAGAGACCAAAACGAGAAAGAAACTTCACTCGAGATTGTACTAAGACTAAAATGTGAACAAAAAAAATGTAGCCATGTGTACGAGATCTTACCACTCAAACCCGAATGCAAATAAAATTTGAACTTTCAACTTTCAACTTAGAAATCGAGCTATAGGTTAATTACTGTTGAGTTATGATTGAATTTTGAATCTAAATTTTCTATTCGTATTCATACAAAATACAGGAAGAGAAGGGTTTGGTTGGGGACGTTCGAGACGGCGGAGGAGGCAGCGAGAGCGTACGATCAGGCCGCCGTGTTAATGAGCGGTCGAAACGCAAAAACCAACTTTCCGATGAGCGAAACGGCGGCGCCAGAATTAGAAAAACTCAACAACATCACTACTCCATCTTCAACAAAGGGCTTATCAGAGATCCTCCACGCCAAGCTTCGAAAATGCAGCAAAGCGCCGTCGCCATCAATGACGTGTCTCCGACTCGACACTGAAAATTCCCACATCGGCGTTTGGCAAAAACGCGCCGGCCAACGCTCTGACTCAAGCTGGGTCATGACGGTTCATTTGGGAAAAGAAAACTCCTCCTCCTCCACCGCCGCCGCTTACGGCGGCAATGACGACGGTGGGCGGTTGTGGAATAGTAAAAAAAGTGGTGGCGCTTCAATGGCGGGCGGTGGACCCCACATGAGGAATTTGCAGATGGATGAAGAAGAAAGAATTGCATTGCAAATGATTGAGGAGTTGCTGAGCAGAAATTATGGTAACCCATCTGAAATTCAAGTTCAAGATCATCAAGAGGAAGCAAAGCTAAGCCCTTTCTAATTTAACTTCAAATTATTTACTTATAATTATATCACAAATTTATGATTAATTAT

mRNA sequence

CCCCTCTCTCCTCCCTCTTTCTCTCTCTTTGTGGGAGAGACAAGAGACAGAAGCTTGGACAAAATCATGGCGCCATCAAAGAAGTTTAGAGGCGTTAGGCAACGACACTGGGGATCTTGGGTCTCCGAAATTCGCCACCCTCTTCTGAAGAGAAGGGTTTGGTTGGGGACGTTCGAGACGGCGGAGGAGGCAGCGAGAGCGTACGATCAGGCCGCCGTGTTAATGAGCGGTCGAAACGCAAAAACCAACTTTCCGATGAGCGAAACGGCGGCGCCAGAATTAGAAAAACTCAACAACATCACTACTCCATCTTCAACAAAGGGCTTATCAGAGATCCTCCACGCCAAGCTTCGAAAATGCAGCAAAGCGCCGTCGCCATCAATGACGTGTCTCCGACTCGACACTGAAAATTCCCACATCGGCGTTTGGCAAAAACGCGCCGGCCAACGCTCTGACTCAAGCTGGGTCATGACGGTTCATTTGGGAAAAGAAAACTCCTCCTCCTCCACCGCCGCCGCTTACGGCGGCAATGACGACGGTGGGCGGTTGTGGAATAGTAAAAAAAGTGGTGGCGCTTCAATGGCGGGCGGTGGACCCCACATGAGGAATTTGCAGATGGATGAAGAAGAAAGAATTGCATTGCAAATGATTGAGGAGTTGCTGAGCAGAAATTATGGTAACCCATCTGAAATTCAAGTTCAAGATCATCAAGAGGAAGCAAAGCTAAGCCCTTTCTAATTTAACTTCAAATTATTTACTTATAATTATATCACAAATTTATGATTAATTAT

Coding sequence (CDS)

ATGGCGCCATCAAAGAAGTTTAGAGGCGTTAGGCAACGACACTGGGGATCTTGGGTCTCCGAAATTCGCCACCCTCTTCTGAAGAGAAGGGTTTGGTTGGGGACGTTCGAGACGGCGGAGGAGGCAGCGAGAGCGTACGATCAGGCCGCCGTGTTAATGAGCGGTCGAAACGCAAAAACCAACTTTCCGATGAGCGAAACGGCGGCGCCAGAATTAGAAAAACTCAACAACATCACTACTCCATCTTCAACAAAGGGCTTATCAGAGATCCTCCACGCCAAGCTTCGAAAATGCAGCAAAGCGCCGTCGCCATCAATGACGTGTCTCCGACTCGACACTGAAAATTCCCACATCGGCGTTTGGCAAAAACGCGCCGGCCAACGCTCTGACTCAAGCTGGGTCATGACGGTTCATTTGGGAAAAGAAAACTCCTCCTCCTCCACCGCCGCCGCTTACGGCGGCAATGACGACGGTGGGCGGTTGTGGAATAGTAAAAAAAGTGGTGGCGCTTCAATGGCGGGCGGTGGACCCCACATGAGGAATTTGCAGATGGATGAAGAAGAAAGAATTGCATTGCAAATGATTGAGGAGTTGCTGAGCAGAAATTATGGTAACCCATCTGAAATTCAAGTTCAAGATCATCAAGAGGAAGCAAAGCTAAGCCCTTTCTAA

Protein sequence

MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKTNFPMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMAGGGPHMRNLQMDEEERIALQMIEELLSRNYGNPSEIQVQDHQEEAKLSPF

Homology

[Close]

BLAST of CmaCh05G012930 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.7e-59
Identity = 128/216 (59.26%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  +KKFRGVRQRHWGSWV+EIRHPLLKRR+WLGTFETAEEAARAYD+AAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPMSETAAPE-------LEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDT 120
           NFP++     E       +   + +++ +S+  LS IL AKLRKC K+PSPS+TCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ENSHIGVWQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMA 180
            +SHIGVWQKRAG +SDSSWVMTV LG  +SS  T               SK S  A +A
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQET--------------TSKASQDAILA 180

Query: 181 -------GGGPHMRNLQMDEEERIALQMIEELLSRN 203
                  GG    R   +DEEE++ALQMIEELL+ N
Sbjct: 181 PTTEVEIGGS---REEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of CmaCh05G012930 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-47
Identity = 105/200 (52.50%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  SKKFRGVRQR WGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGV 120
           NFP+ ++      ++N+     S K LSE+L+AKLRK  K  +P +TCLRLD ++SHIGV
Sbjct: 61  NFPVIKSNGSNSLEINSAL--RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMAGGGPHMR 180
           WQKRAG ++  +WV  V LG         A  GG+ +  ++                 +R
Sbjct: 121 WQKRAGSKTSPNWVKLVELG-----DKVNARPGGDIETNKM----------------KVR 177

Query: 181 NLQMDEEERIALQMIEELLS 201
           N  + E++++A+QMIEELL+
Sbjct: 181 NEDVQEDDQMAMQMIEELLN 177

[Close]

BLAST of CmaCh05G012930 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-46
Identity = 107/202 (52.97%), Postives = 140/202 (69.31%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  S+KFRGVRQR WGSWVSEIRHPLLKRRVWLGTFETAE AARAYDQAA+LM+G+NAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPM--SETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHI 120
           NFP+  SE  +  ++ +N  +   S K LSE+L+AKLRK  K  +PS+TCLRLDT++SHI
Sbjct: 61  NFPVVKSEEGSDHVKDVN--SPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHI 120

Query: 121 GVWQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMAGGGPH 180
           GVWQKRAG ++  +WVM + LG   + S+         D G    +K++           
Sbjct: 121 GVWQKRAGSKTSPTWVMRLELGNVVNESAV--------DLGLTTMNKQN-----VEKEEE 180

Query: 181 MRNLQMDEEERIALQMIEELLS 201
                + +E+++A++MIEELL+
Sbjct: 181 EEEAIISDEDQLAMEMIEELLN 187

[Close]

BLAST of CmaCh05G012930 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 63/99 (63.64%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 3   PSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKTNF 62
           P ++FRGVRQRHWGSWVSEIRHPLLK R+WLGTFETAE+AARAYD+AA LM G  A+TNF
Sbjct: 4   PQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNF 63

Query: 63  PMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKA 102
           P +  A P           SS+K LS  L AKL KC  A
Sbjct: 64  PYNPNAIP----------TSSSKLLSATLTAKLHKCYMA 92

[Close]

BLAST of CmaCh05G012930 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 3   PSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKTNF 62
           P +++RG RQRHWGSWVSEIRH +LK R+W GTFE+AE+AARAYD+AA LM G  A+TNF
Sbjct: 4   PQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNF 63

Query: 63  PMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKA 102
           P +           N +  SS+K LS  L AKL +C  A
Sbjct: 64  PYNP----------NASQSSSSKLLSATLIAKLHRCYMA 92

[Close]

BLAST of CmaCh05G012930 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 229.2 bits (583), Expect = 3.3e-60
Identity = 128/216 (59.26%), Postives = 151/216 (69.91%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  +KKFRGVRQRHWGSWV+EIRHPLLKRR+WLGTFETAEEAARAYD+AAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPMSETAAPE-------LEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDT 120
           NFP++     E       +   + +++ +S+  LS IL AKLRKC K+PSPS+TCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ENSHIGVWQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMA 180
            +SHIGVWQKRAG +SDSSWVMTV LG  +SS  T               SK S  A +A
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQET--------------TSKASQDAILA 180

Query: 181 -------GGGPHMRNLQMDEEERIALQMIEELLSRN 203
                  GG    R   +DEEE++ALQMIEELL+ N
Sbjct: 181 PTTEVEIGGS---REEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of CmaCh05G012930 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 2.9e-48
Identity = 105/200 (52.50%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  SKKFRGVRQR WGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGV 120
           NFP+ ++      ++N+     S K LSE+L+AKLRK  K  +P +TCLRLD ++SHIGV
Sbjct: 61  NFPVIKSNGSNSLEINSAL--RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMAGGGPHMR 180
           WQKRAG ++  +WV  V LG         A  GG+ +  ++                 +R
Sbjct: 121 WQKRAGSKTSPNWVKLVELG-----DKVNARPGGDIETNKM----------------KVR 177

Query: 181 NLQMDEEERIALQMIEELLS 201
           N  + E++++A+QMIEELL+
Sbjct: 181 NEDVQEDDQMAMQMIEELLN 177

[Close]

BLAST of CmaCh05G012930 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 8.4e-48
Identity = 107/202 (52.97%), Postives = 140/202 (69.31%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  S+KFRGVRQR WGSWVSEIRHPLLKRRVWLGTFETAE AARAYDQAA+LM+G+NAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPM--SETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHI 120
           NFP+  SE  +  ++ +N  +   S K LSE+L+AKLRK  K  +PS+TCLRLDT++SHI
Sbjct: 61  NFPVVKSEEGSDHVKDVN--SPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHI 120

Query: 121 GVWQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMAGGGPH 180
           GVWQKRAG ++  +WVM + LG   + S+         D G    +K++           
Sbjct: 121 GVWQKRAGSKTSPTWVMRLELGNVVNESAV--------DLGLTTMNKQN-----VEKEEE 180

Query: 181 MRNLQMDEEERIALQMIEELLS 201
                + +E+++A++MIEELL+
Sbjct: 181 EEEAIISDEDQLAMEMIEELLN 187

[Close]

BLAST of CmaCh05G012930 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 5.1e-45
Identity = 102/200 (51.00%), Postives = 133/200 (66.50%), Query Frame = 0


Query: 1   MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKT 60
           M  SKKFRGVRQR WGSWVSEIRHPLL   VWLGTF+TAE AARAYDQAAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGV 120
           NFP+ ++      ++N+     S K LSE+L+AKLRK  K  +P +TCLRLD ++SHIGV
Sbjct: 61  NFPVIKSNGSNSLEINSAL--RSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQKRAGQRSDSSWVMTVHLGKENSSSSTAAAYGGNDDGGRLWNSKKSGGASMAGGGPHMR 180
           WQKRAG ++  +WV  V LG         A  GG+ +  ++                 +R
Sbjct: 121 WQKRAGSKTSPNWVKLVELG-----DKVNARPGGDIETNKM----------------KVR 174

Query: 181 NLQMDEEERIALQMIEELLS 201
           N  + E++++A+QMIEELL+
Sbjct: 181 NEDVQEDDQMAMQMIEELLN 174

[Close]

BLAST of CmaCh05G012930 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 9.7e-28
Identity = 63/99 (63.64%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 3   PSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKTNF 62
           P ++FRGVRQRHWGSWVSEIRHPLLK R+WLGTFETAE+AARAYD+AA LM G  A+TNF
Sbjct: 4   PQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNF 63

Query: 63  PMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKA 102
           P +  A P           SS+K LS  L AKL KC  A
Sbjct: 64  PYNPNAIP----------TSSSKLLSATLTAKLHKCYMA 92

The following BLAST results are available for this feature:

BLAST of CmaCh05G012930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	4.7e-59	59.26	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	4.1e-47	52.50	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	1.2e-46	52.97	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q94AW5	1.4e-26	63.64	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	2.0e-22	55.56	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of CmaCh05G012930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	3.3e-60	59.26	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.9e-48	52.50	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	8.4e-48	52.97	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	5.1e-45	51.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	9.7e-28	63.64	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 7..18 score: 61.21 coord: 29..45 score: 73.48
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..69 e-value: 1.9E-38 score: 143.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 6..50 e-value: 3.0E-12 score: 46.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..63 score: 21.86483
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 5..65 e-value: 2.98062E-33 score: 112.365
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..65 e-value: 1.8E-26 score: 94.1
None	No IPR available	PANTHER	PTHR31194:SF49	AP2-EREBP TRANSCRIPTION FACTOR	coord: 1..208
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..208
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G012930.1	CmaCh05G012930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity