CmaCh05G012870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G012870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	axial regulator YABBY 5-like
Location	Cma_Chr05: 9820965 .. 9824076 (+)
RNA-Seq Expression	CmaCh05G012870
Synteny	CmaCh05G012870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTATTTAATTGCCTCTTTCACTTCATTTTCATACACTAACTTCCAGTCTCTTCTAAAAAGCTTTGCCTTTTTCAATCATGTCAAGCTGCATCAACAGTGCACAAGAGCAGCTCTGCTATATCCCCTGCAATTTTTGCAATATTGTTCTTGCGGTATATTGCTATCTACTTTCATCCAAACTCCACAAAATTGATATCTATTCTCTTCATCACCCTTCATTTTTGCTATCAAGATCTGGTTTTCCCCCTCTTTTTTGTGCTCGATTTTCTCTTTTGAAAGCTTTTAGATATATGTAATGATCATTCCTTTCTGGGTTTGTTTTTGTTCTTCTAATTCAGCTTAACTATGTTCAAATTGGCTAGAACGAAAAAATGTGCTCGATTTTCTCTTTATAAAACTTTTAGATATATAAAATGATCATTCATTCTTCTAATTCAGCTGATCTATGTTCAAATTGGCTAGAGATCTAGTCTCTTACTAGGGCTAACTTTGAGAAAATTAACTGGGTTGTTTTAATTTTCGATATTTTTTCCTGCGATGAATCAAATGTTTTTTTTTTTTTTTTTTTCCCGACCAAACAGGTGAGTGTTCCATGCAGCAATATCTTTGACATCGTGACCGTCCGATGTGGTCACTGCAGCAACCTCTGGTCTGTGAACATGGCTGCAGCTTTCCAATCTCTCTCATGGCAGAATTCTCAGGTAATTTATTTATTTTTTTATTAATTCATTGAAGAGATCTCAAATGTCTGAAGAACAGCAGCGGCCATGGCGGGGGAAAACCCTCAAAATTGAAAGAAAAAAAAAAACACTTTTATCTTCTAAGATCATGTTTTTGACTGATTTTCCAACATGGGTCAATGGAGTTTTCAAAACCCTAGGCAGCGGCGGTAGTGGTGGCGGTGGTAGTGGGGACGGCGGGGCGGCGGCAGCCGCCGCCATAACCTATTTGGAATCAGAGAAGCTAGGAATTTTCGATCAAAAAAAGAAAATTTTCAAACTTTGAGGCACCTTTTTTTGTTCTAGAAAATTTATTTTTGGTTGATTTGATTGATTTATTTATTGTTCGTTTTAGGGTTTTTTTTGTTTTTGGTTCATTCTCTTACGTCTTTTCCAAAGCTTTTGTCTTCTACTATTGAAACAACAGATCCATGAACAGATGGTTTTTAATTTCTTTTCACCAATTTTCTAATTATTTTCCACTCATTTTCAAATTCTCTCTTTCTCTCTCTCTTCAAATCCTTAAAAACATAGTGTTTTTTTCTTTCAAAACATAACATTAATGTCTCAAAAGGCCACCTTAATCAATCTTTGTCTCTCCCTCTTTATGGAACATAACTAGCTTCATCTTTCATCTCTCTAAATTAGCCTAGTTGTTATCGATTTCGTTTTCAGGTTTCTGATTGTTTCCTCTTAATCTTTTGATTATCATTTTCATCTTTGTTAAGAAAAAACGCTTGAATTCATAGTTAAATTAATTTTTTTTAGCTGGGGAAGTCGGGTTTGTAAACTTCATTTTCAAAAACTAAAAATTGATAGGTTATCCTACGAAGATGTAAGTTTTTCATATAGTTTTTAGTCAAATTCAAACTACTTTTCTTAGTTTTCAAAACCCGACTTGTTTTTCAAAAATATCGCTAAAAACACAAAAATCAAACTTTTAGTGCAAATATGCACGTTTATAAACTTAATTCTCTCCAAACAAAAAGTCGAAATGTTTATGAAACGAGGTCTCTAAAAATTAGCTTAATTAGAACATAATCAAACTTTGATTTCTCTCTAACTTAGCTTATTTCTTATTCTCCCTTAAAAATAAACAAAACCCATGAAGCCAAACCAAATTTTATGAAATGGGTATCAACAATTTAGCTTCATCTCTCTCTAAGCAGCCTTTTTCCCTCTCTTAAACAAAAAAAAAAACACATAAATTTAGGCATCAAACCACACCCACAGTGGGCTTGCAGCTGATCATTACAGAGCTGAATTGGGTTCATCATCAAAATGCAACAACAAAATGAAGATGAGAGCTCCAATTAGAAACCCTACAAATGATGATCAAAGGATCATCAATCGAGGTAAAAAAAAAAAAAAGATCAAATTTTTCTTTAATTCAATCATTAAATTTTCTATATTTATGTTTCCGAGTTGTTATTTTCTTTTTTCAGCTCCCGAGAAGAAGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAGTATGAAAAATAAAAATTAAAACTTTATTATTTTTGTGATTTTTATATAAATTATTTTTTCATGGGTCATTTCAGTTCATCTTTTTCTTTTAAAATCTGACAAAATTACATAAAATTCAGAGAGGAAATCCAGAGGATCAAAGCAAATAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATGTAAGTACTTTTTTTTATGGATAACTTATGTTCATAGTTCATAAAAATTAGGGTTTTTTTTGTTTGTTTGTTCATAAGAAAATATGACAATCTTTTGGGTATTGACTTGCTTAATTCTGAAATGGCAGTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTGGAAACCAACAATCTCCAGACTAAGACGAAGAGCGATGTGAGTAGATATCGTAACGAAATAGTTAAACGCTGATCGATTGTCGTTTTACGATTTCGTTTTGAGTTTCCTAGTTCTTTAATCGTAGAAAACGAACGATTTCTTGTTTTATTTGTTGTTATTAGACGAGACGAGCGCGATATGAACTTGAATTTTGACGGTTTTTTTTTTATTATTATTATTAATGTTTGATAGGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTATTGATGGAGGAAATGATGGGTTTGGAGAACATGATCTAAGCCAAAAACAAGAACAAATTGGGTAATTTCAAGTGATGAAATTAACAGCCATGCATATGTTTGCTTTGATTTCTATGTTTATTTGCAATTACTTTATTGGTTATTAGGGGAAATGTTTGCCTAAATTATGAACTGAAATTGTAATGTGTCTGATTTTAATATGTATGTATCCCGGTTTCTTGGGAAAGTAAGTTAATTAATAGAATATCATGTTTCTAAT

mRNA sequence

TTTCTCTATTTAATTGCCTCTTTCACTTCATTTTCATACACTAACTTCCAGTCTCTTCTAAAAAGCTTTGCCTTTTTCAATCATGTCAAGCTGCATCAACAGTGCACAAGAGCAGCTCTGCTATATCCCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAATATCTTTGACATCGTGACCGTCCGATGTGGTCACTGCAGCAACCTCTGGTCTGTGAACATGGCTGCAGCTTTCCAATCTCTCTCATGGCAGAATTCTCAGGCATCAAACCACACCCACAGTGGGCTTGCAGCTGATCATTACAGAGCTGAATTGGGTTCATCATCAAAATGCAACAACAAAATGAAGATGAGAGCTCCAATTAGAAACCCTACAAATGATGATCAAAGGATCATCAATCGAGCTCCCGAGAAGAAGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAAGAGGAAATCCAGAGGATCAAAGCAAATAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTGGAAACCAACAATCTCCAGACTAAGACGAAGAGCGATGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTATTGATGGAGGAAATGATGGGTTTGGAGAACATGATCTAAGCCAAAAACAAGAACAAATTGGGTAATTTCAAGTGATGAAATTAACAGCCATGCATATGTTTGCTTTGATTTCTATGTTTATTTGCAATTACTTTATTGGTTATTAGGGGAAATGTTTGCCTAAATTATGAACTGAAATTGTAATGTGTCTGATTTTAATATGTATGTATCCCGGTTTCTTGGGAAAGTAAGTTAATTAATAGAATATCATGTTTCTAAT

Coding sequence (CDS)

ATGTCAAGCTGCATCAACAGTGCACAAGAGCAGCTCTGCTATATCCCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAATATCTTTGACATCGTGACCGTCCGATGTGGTCACTGCAGCAACCTCTGGTCTGTGAACATGGCTGCAGCTTTCCAATCTCTCTCATGGCAGAATTCTCAGGCATCAAACCACACCCACAGTGGGCTTGCAGCTGATCATTACAGAGCTGAATTGGGTTCATCATCAAAATGCAACAACAAAATGAAGATGAGAGCTCCAATTAGAAACCCTACAAATGATGATCAAAGGATCATCAATCGAGCTCCCGAGAAGAAGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAAGAGGAAATCCAGAGGATCAAAGCAAATAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTGGAAACCAACAATCTCCAGACTAAGACGAAGAGCGATGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTATTGA

Protein sequence

MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQASNHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDDQRIINRAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKTKSDGSEKHLMSVPGLHY

Homology

[Close]

BLAST of CmaCh05G012870 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 8.1e-60
Identity = 118/163 (72.39%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 8   AQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQAS 67
           A EQLCYIPCNFCNI+LAV+VPCS++FDIVTVRCGHC+NLWSVNMAAA QSLS  N QA+
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 68  NHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDDQRIINRAPEKKQRVPSAYNQF 127
           N+            E GSSS+ + K+  R   R  T  +QRI+NR PEK+QRVPSAYNQF
Sbjct: 67  NYA---------VPEYGSSSRSHTKIPSRISTRTIT--EQRIVNRPPEKRQRVPSAYNQF 126

Query: 128 IKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 171
           IKEEIQRIKANNPDI+HREAFSTAAKNWAHFPHIHFGLMLE+N
Sbjct: 127 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of CmaCh05G012870 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-41
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MS+ I  A E +CY+ CNFCN + AVSVP +++ +IVTVRCGHC++L SVN+    Q+L 
Sbjct: 1   MSAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALP 60

Query: 61  WQNSQASNHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDDQRIIN-RAPEKKQR 120
            ++    N     ++     +E GSSS+       R P+    ND + +++ R PEK+QR
Sbjct: 61  AEDHLQDNLKMHNMSFRENYSEYGSSSRYG-----RVPMMFSKNDTEHMLHVRPPEKRQR 120

Query: 121 VPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGL 166
           VPSAYN+FIKEEI+RIKANNPDI+HREAFSTAAKNWAHFP+IHFGL
Sbjct: 121 VPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGL 161

[Close]

BLAST of CmaCh05G012870 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.2e-40
Identity = 99/220 (45.00%), Postives = 122/220 (55.45%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNM-------------- 66
           S  EQLCY+ CN C+ +LAV VPCS++F  VTVRCGHC+NL SVN+              
Sbjct: 20  SPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPAN 79

Query: 67  -------------------AAAFQSLSWQNSQASNHTHSGLAADHYRAELGSSSKCNNKM 126
                                AFQ+ S    QA++ + S +          SSS  +N  
Sbjct: 80  QLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITG------RSSSSCASNAP 139

Query: 127 KMRAPIRNPTNDDQRI-------INRAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHRE 186
            M+ P   P   +  +        NR PEK+QRVPSAYN+FIK+EIQRIKA NPDI+HRE
Sbjct: 140 AMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHRE 199

[Close]

BLAST of CmaCh05G012870 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.2e-40
Identity = 99/220 (45.00%), Postives = 122/220 (55.45%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNM-------------- 66
           S  EQLCY+ CN C+ +LAV VPCS++F  VTVRCGHC+NL SVN+              
Sbjct: 20  SPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPAN 79

Query: 67  -------------------AAAFQSLSWQNSQASNHTHSGLAADHYRAELGSSSKCNNKM 126
                                AFQ+ S    QA++ + S +          SSS  +N  
Sbjct: 80  QLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITG------RSSSSCASNAP 139

Query: 127 KMRAPIRNPTNDDQRI-------INRAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHRE 186
            M+ P   P   +  +        NR PEK+QRVPSAYN+FIK+EIQRIKA NPDI+HRE
Sbjct: 140 AMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHRE 199

[Close]

BLAST of CmaCh05G012870 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 6.0e-39
Identity = 101/222 (45.50%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 9   QEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNM--------AAAFQSLS 68
           QEQLCY+ CNFC+ +LAV VPCS++F  VTVRCGHC+NL SVN+        A+    L 
Sbjct: 28  QEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLP 87

Query: 69  WQNSQASNHTHSGL-----------------AADHYRAELGSSSKC------------NN 128
           +  +  S  +  GL                 A+ +  +   S+S C             N
Sbjct: 88  FGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAAN 147

Query: 129 KMKMRAPIRNPTNDDQRIINRAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTA 188
           K   R P + P N      NR  EK+QRVPSAYN+FIK+EIQRIKA+NPDITHREAFS A
Sbjct: 148 KATQREP-QQPKNAPS--ANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAA 207

Query: 189 AKNWAHFPHIHFGLMLETNNLQTKTKS-DGSEKHLMSVPGLH 193
           AKNWAHFPHIHFGLM +    +T  +S DG+ + ++   GL+
Sbjct: 208 AKNWAHFPHIHFGLMPDQGLKKTGIQSQDGAGECMLFKDGLY 246

[Close]

BLAST of CmaCh05G012870 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 231.5 bits (589), Expect = 5.8e-61
Identity = 118/163 (72.39%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 8   AQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQAS 67
           A EQLCYIPCNFCNI+LAV+VPCS++FDIVTVRCGHC+NLWSVNMAAA QSLS  N QA+
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 68  NHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDDQRIINRAPEKKQRVPSAYNQF 127
           N+            E GSSS+ + K+  R   R  T  +QRI+NR PEK+QRVPSAYNQF
Sbjct: 67  NYA---------VPEYGSSSRSHTKIPSRISTRTIT--EQRIVNRPPEKRQRVPSAYNQF 126

Query: 128 IKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 171
           IKEEIQRIKANNPDI+HREAFSTAAKNWAHFPHIHFGLMLE+N
Sbjct: 127 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of CmaCh05G012870 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 231.5 bits (589), Expect = 5.8e-61
Identity = 118/163 (72.39%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 8   AQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQAS 67
           A EQLCYIPCNFCNI+LAV+VPCS++FDIVTVRCGHC+NLWSVNMAAA QSLS  N QA+
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 68  NHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDDQRIINRAPEKKQRVPSAYNQF 127
           N+            E GSSS+ + K+  R   R  T  +QRI+NR PEK+QRVPSAYNQF
Sbjct: 67  NYA---------VPEYGSSSRSHTKIPSRISTRTIT--EQRIVNRPPEKRQRVPSAYNQF 126

Query: 128 IKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 171
           IKEEIQRIKANNPDI+HREAFSTAAKNWAHFPHIHFGLMLE+N
Sbjct: 127 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of CmaCh05G012870 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38
Identity = 87/174 (50.00%), Postives = 113/174 (64.94%), Query Frame = 0


Query: 5   INSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS---- 64
           ++ + E++CY+ C+FC  +LAVSVP +++F +VTVRCGHC+NL S+N+  +    S    
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 65  WQNSQASNHTHSGLAADHYRAELGSSSKCNNKMK----MRAPIRNPTNDDQRIINRAPEK 124
            Q+ Q      + L     R +  SSS+  N +       AP   P         R PEK
Sbjct: 63  HQDLQPHRQHTTSLVT---RKDCASSSRSTNNLSENIDREAPRMPPI--------RPPEK 122

Query: 125 KQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 171
           +QRVPSAYN+FIKEEIQRIKA NP+I+HREAFSTAAKNWAHFPHIHFGL L+ N
Sbjct: 123 RQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGN 165

[Close]

BLAST of CmaCh05G012870 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 151.8 bits (382), Expect = 5.8e-37
Identity = 89/175 (50.86%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQA 66
           S  + LCY+ CNFC  +LAV+VP +++F  VTVRCG C+NL SVNM +     S Q  Q 
Sbjct: 20  SPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQ-LQL 79

Query: 67  SNHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDD---------------QRIIN 126
               HS         EL  +    N M M    ++PT +D                  +N
Sbjct: 80  QLGPHSYFNPQDILEELRDAPSNMNMMMMN---QHPTMNDIPSFMDLHQQHEIPKAPPVN 139

Query: 127 RAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLM 167
           R PEK+QRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAHFPHIHFGL+
Sbjct: 140 RPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLV 190

[Close]

BLAST of CmaCh05G012870 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 151.0 bits (380), Expect = 9.9e-37
Identity = 93/190 (48.95%), Postives = 113/190 (59.47%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLSWQNSQA 66
           S+ +QLCY+ C+FC+ VLAVSVP S++F  VTVRCGHCSNL SV ++     L       
Sbjct: 20  SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLL----PSV 79

Query: 67  SNHTHSGL----------AADHYRAELGSSSKCNNKMKMRAPIRNP-------TNDDQRI 126
           SN  HS L            +  R+  G +   N  M   A   +P       T + + +
Sbjct: 80  SNLGHSFLPPPPPPPPPNLLEEMRSG-GQNINMNMMMSHHASAHHPNEHLVMATRNGRSV 139

Query: 127 -----------INRAPEKKQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHF 169
                       NR PEK+QRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAHF
Sbjct: 140 DHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 199

The following BLAST results are available for this feature:

BLAST of CmaCh05G012870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW46	8.1e-60	72.39	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q10FZ7	2.2e-41	54.22	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]
A2X7Q3	4.2e-40	45.00	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	4.2e-40	45.00	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q01JG2	6.0e-39	45.50	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]

BLAST of CmaCh05G012870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26580.1	5.8e-61	72.39	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	5.8e-61	72.39	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	1.1e-38	50.00	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	5.8e-37	50.86	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	9.9e-37	48.95	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 8..165 e-value: 1.4E-69 score: 233.9
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..178
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 103..161 e-value: 1.7E-6 score: 30.2
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 105..158
None	No IPR available	PANTHER	PTHR31675:SF6	AXIAL REGULATOR YABBY 5	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G012870.1	CmaCh05G012870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding