CmaCh05G012660 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G012660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	translocase of chloroplast 90, chloroplastic-like
Location	Cma_Chr05: 9670604 .. 9679003 (+)
RNA-Seq Expression	CmaCh05G012660
Synteny	CmaCh05G012660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTTTCTACTTCTCACTTGTAAGTCAACTTTTTCTCAACCAACTTGGTTATGAGTTACTAGTAGGATCAACCACCTTACGTTTTTCGCACGCTAAAAATCCCTTTGTTCGAGTCCAATTTGCGTTGTTGAGCTGAACACATTGACAATTATGAACCCATTCATGAGGAAAGGTCAGACCAGGTTTGTTAAGGATCTCTGGTTCCTGGAAAATCTCCTAAACAATCCTCCATTAATGTCAAAATTTCCAATTCTTGACAAATTTCCAATATGAATAAAGATATTAATTATAAGCATAACTTACTCGAGTAACGTATTGACGAATTCAAATAAATTTTGAGCTTTTATTATCATGGTTTTTTAGAAAAATCATTTAGATTGATGTTTGCATTGGCATCGTCATAAAACTAAGGCTCCGTACACTTCATTCATGTTAGATGGCTGTGGTTTATGGAGTTAAGCTTACTTGAAATGAATTTTTATGCCGCTGTCTTCTAGATTTTGTCTTAGCGCAGCATTTAACTATTAAGTTCTGATTTTTGTGTATGAGAATAATTCTGATTTTAGAATATTATTTCATTATAGTATTGAATGACTTATCCCTGTCTCTTTTCCAGTGCAGGCAATGGAGACTGTTGTATTGCTCATAGAGTATTTTCGGGCATATTGCGATCTGATGTCATGTGTATGGCATGTGGTTTTACATCGACAACTTATGATCCATGTGTAGACATCTCTTTGGATTTGGAACCAAATCAAGCGGGATCTGCGAAGATGGCGGCCACAAGGAATCTTCCTTGCAATGGCGAGGCAGATTGCATGAACTCGAGCCAAAACCAGCGGCTATCTTCCCTGGTGGGTTGTTTGGATCAATTCACTAGACCCGAAAAACTCGGGTCCGACCAAAAATTCTTCTGCCAACAGTGTCAAGTGCGGCAGGAATCACTCAAACAGATGTCCATAAGAAAGCTTCCATTAGTTTCTTGTTTCCACATTAAAAGATTCGAGCATTCTTCAGTTCGAAAAATGTCAAGGAAGGTGGACCGATATTTGCAGTTTCCGTTTTCTTTAGACATGGCACCTTATCTCTCATCTTCAATCTTGAGAAGTCGATTTGGTAATAGGATTTTTCCTTTTGATGGAGATGAACAAGATGGTTGTAATGAGACATCGTCTGAGTTCGAGTTGTTTGCCGTTATCACTCACAAAGGAAAATTGGACGCTGGTCATTACGTGACCTACTTGCGGCTAAGTAATCAATGGTATAAGTGCGATGATGCTTGGATTACCCAAGTCAACGAAAACATCGTCAGGGCTGCACAAGGATACATGATGTTTTATGTGCAGAAGATGCTCTATTACAAATCTAGTGAGAAACAGAATGCTTCATAACTTGATTATGGGACGAGATCGGTTGAAACTCAATCGATTATGTTTGTTTTCCATGAAAGCCAGGAATCGATATTGTTTTCAGTGACAAGCTGAGCTCTAAGTGGATGCCTACACATTCTAGTAGAAGATCCAGGCGTGCCCAAACTTTTTGGGGAGGATCATTGTCAGATCCCTACTATTTGAAGGGAACTTCTGGTACCTTTTTCTAACTCCCTTTTCACTACTAATCAAGTAATGTTGGTGACTTGCCATGGAGTGTTTCAGTACTTGGAGTTGTGGCTCAGCAGATTACTGATCTCTCTTCACATACCATGAAGAAGAGGTATGAAAAATCTAATTTTAGAGCTCTCTCTCTCTTTAGATATCTCTAAGAATTTCGGGTTCTTCGTGTCCCGGGCTTCCGATTTTGAAATTTATCCATCATTTTTTTTGGTGGATAACCACCTATTAATTCAAACATGAAACAGTACAATGAAAGGCTGCCTCTTCAGCCTTTTTATTACACGTGATTAATACTGATGAATTTAAGTCTCCATTGATTCTGTCTCTGATTATTCTATTTATTGACATGAACATATGAACGTTTATGACATTTTCAGTCTGATTCTGTTGACATATGTTTCAAAAAAGTTACAAAAAAGTTGTGTTCAAAGTCGAGTTTTGCTGTTGATGAAGAAAGAGCTCTCTATAAACTTGTGTGTACGTTCCAAGTTCTTGTTGATCACACCCTTTGAATTACTTCTGTGCATTCTGAATATCTCTATCTGAACTTTGTTGTCAGCTATGAACCCTACAAAGATCTGAGAGAAAAAAGGGAGAATTTTACAGCATTTGAAATTAAATTGTACAATCAAGTCGAAATCGATGCTTTTTATGTGATTGGGAACGAGATGCTTTCTTTGGTAGATCGGATTGGAAGTATTCTGTCTTCGTTTTCAAAACTATTCATTAGGGAAACAGCTTCATTTTGTTCTTAAAAACAGGTTGTACATGAAAGTCGACACTCAATAGTTCGAGAGCGTGTAGTTTTGAAGTCTGATAATAATTGGTCTCTTACCCTAAAACATTTGATAAGAATAAACGTTCCTATGTTAGGCTTGTAAGTTAGACGTTTGTATCGGTCGGGAATGTGAGTTGTCAAACTCGCACTTCACAAAAACTGTTTACTTATCGATATAATTAAAAGAATTGAGAGTTTAGTATAAAGTTTTTTTTTTTTAAAAAAAATTAAATTCAAATAATAAAATGTTTAAAAAAGTATAAATGTTAGCTAAACATTTATATACTTACATTTATATATCTAAGTAGGTCCTAAACATTTATATACTTAGAATTTTTTGAATAAATGAGCAAACTTTATTATAATTATAAGGTTATGTAAAATTTAGTAAGTGACATCAATTAGTACCCTAATAATTAATCCATTGAATTAAGATATCAATAATTAATCCTTTAATTTCTTACCTTATTGAATTAAAAAATTCAATTTTGAAATTTAAATATTTTTTAATGGATTTTTCTTTAAAAAAGAAAAAAACAAAAAGTGATATTGCATTGACCTCTCTCCTTCCACCACGTGTTTTTCATTACCCTTCCAGGTATTTATCGTGTGCAGCCATGCTCATCATAATCACATGCTTACCACGTGTCGCATTTTAAAATTAAACTATCATGGTTCTTTCCGCACCTTATAGTTACCCGTTGTCCTCTCTTGTGCTTCCGTTTCATTTCAGTTTCCAAATTGTGTTTCTGTCTTATCCCTTCTCTCTCGCCTTAGCCCTCGCAATTTTGCTCGCTCCTTTGTCCTCACCGTACTCGTCAATCGGAATCGGAATCGGAATCTCAATCTGCCGGACCTTTGTTGGTCGGTTTCCGACAGGAAGTTCTGTAATTGGGTTGTGAACGTAATATTGGCTCAACTTTGGCTTGGTTCTTGGAGAAGTTGAGCTGATGCTATCGCTTCGACGATTTGTTTGATTGAATTCGGGTTGATTTCACTGGTGTTTAGGTGAGAATTTATCTCTTTCTTTCACAATTTAGCTGAATTTATTGTTCTTATTTTTACGCATTCAATGGAAAAATCTGGTGAGTATATAGTATAGTTGAACTGGATATAGGTTGCTGTTTAGGAGGTATTTTATTGTGTCGTTGAGCTTGGAAGTGCGAATAGAGGGTAGGGAAAGATAAAAGAATGAGGATTTGTGGTGATGGTTAAGGACATGCATATCTTGGAAAATGTCTGAGTCGTATCCGTTGAGTTTTTAGTAACTCTTGGTGTCTTTTTGCCTCATGATGTCTTGGATTATTAGGGTAGATCTTGTCAGATGGATTACAAGATTTTTGGGATTGAAGTTGATAATAGTGGATGTAAAGGGAAAGTGCTCGTCTATTGAAGAGAAGTGGACATAATATTATTTGGCCCCTTTGGATTAGATCTTGTGAACTCTCTCATATCGTTTCTAGTTGTGGTAGGAAAATTTTTGTGATGATTTCTTTGGGAACTTGGAAGAGATGGAAAAGGGTGGATGTAGTTTTGAACTTGATCAAAGGAAATATGTTCCGGGTTTTTACAGAGGACTTCACATTAATTCAAGGTGGATAGACTTTTGAAGCGGATTGAAGGGAAACCGGGATGTTTTAGGCACACGACTTTATTGACTTAAAAGTTCTCGTAGAGGTAGTTCAAGGAGTTAACGGGACCGCCATTTATTACTGGGGATGAGGTGGGACAAGAATCTTTAGGTGTGTTTTATTTGATGTGGTGAACTTTTGTTGGGTCTGAATGGTAGTCATTTTTACTGGGATGATCTATATTGCCGAGGAACAGAGGGCCTTTGTATGTCATCAGCAAGTGCTTTACAAGATTGGACCTGCCCAAGGTCAAGCCATTTTATGCAAATAATTTGTGTTATTTTTCTTCTCATTTGGACTTAGGAGGTGTGATCAATTGATAAGGCACATGAACCATGGTATTTTCATTTAATATTTTGCATACCTTTTTAATATTTTGCAGGCAGAATGAAGGGTGTTAGAAACTGGTTGTTTTCTCAATTAGTATCCAAGTCAGTGGTTTCATCAAGACCATTACTGGGGAGTGACAGTTTCTTTGGTGAGGAAAATAAAGAACATGTGGATGAAGACCAAGATGGCGAAGGTACATATCAGTCTAATTGATGAATTTGTCTTTGTTTTAGATTCAAAATTCTCTTGCCTCTGCTGATTGCATAGATTTTGAGAAAATTCATAGCTTGTTTGGTTTACTTATTCAACAGGATATCTCTTGTAAGGATGCTGCCACATTAAAATTGTCATTGTTGCTCTAAACTATTAAGGGATATATTTTAGACAATAGTGAAGGATTGATGTAATATGTACCTTTGCTTTTCGTAAATTTTGGAACTCTTGAAGCTCTGGTTCCCTGGGAACTTCTTGGAATTTAAACTTCCCCACCGCCACCGCCACACACACACACACACACACACAAAAGGTAGTCTTGATGGTTACGCTGGGGTCTTTAAGTTCTTGGATTCCAAGCCTTTAGATAGATAACTTTAAAATATATGGTGTCACTAGGTGCTAGCCTTGGAGTGTGTGAAGTTCCTAGGAGACTAGTATGTTGGGTCCTAAGCATAATGCCAGTGGAGTGGGGTCCTTTAATCTTCTTCTTATAAAAAAAAAATGTTCAAATACTATTTTCGTTTTTGTGCTTTCAGTTTCGGTTGGTCTCTGTACTTTCAATTTTGGTTCAGTTTGGCCCTGTACTTAAAAAATGGACCATTTTGTTCACTTAAAAAGTGAAATAAAAAATGGAAATGAATGGACCAAAATGGTCCGTTTTTTAAGTTGTTCAGGATCAAAATGGATATTTTGAAAGTACAGAGATGAAATGATCTAAAGTTGAGAGTACAAGGACCAAAATGAACCTTTCGAAAATGTAGGGACCAAAGTAGTATTTAAATAAAAAGATTGAACTAAAAACAATTTCTCGAAGGCATAAAAGATCAAGGAATACAAGAGTAAAAAAAGTACGAAACAGAAAATACACCCATATAGTGATTAGCCATGAACATGAACTTTTCATAGACCTAACAAAATGAACCCCTATTGAAAATGACTCTTTTACTGACTTTTGGTACCATCTTGAGAAAATTGAGAATATCAATAAGGGCCTTCCAAATCTGCTGCTAAAGATTTGAGTCATTTTGGCAGAGTTATTTGTTGGTCATCAATACATTTATAGTTTCTTTTTTTACCAATACTTTTAGTTGTTTGAATTTTTTCTTCCTGCCTGATTTGGTTGTTATTTGTATTTCATTGACTCATGAGTTAATTAACTATTTATGGTCACCATTTGTAAAGATTCAAGAAACATATATATTTATGTTCATCACTTGTAGAGATTCATATTCTGTTATCTCTTATCCTTGTACCCCAGCAGCCTTTGTGGTAGATTGGCTCCACTTCTGTTATTTGTGGCTAGATGTAGGCTAAACTACTGAGCTTTGTGAAATTTTTTTAATGGCCAAGTTTATGCCTGGCTTCCTTAACATTAATGTTCTTATGTCAACCAATTTGTCCCAATGAGTCACAGGGTAGAAATATAATGTTGATGGTGCTATTTGGTCACTGATCAGAGAAAATGGTTTTATTGAAGACTTCTTTACTGTTAAAGCTGCTTAGAATGAGCTACATTCTACTGTAGAATAATGTAAACTTGCTTTATAAACCATTTCTGTTTTTTTTTTCAAAGTTTGCAAATTCTATAATAACATCACATTATCTTTTGAAGTTGCACAAGCAACCACTATTGTACCGCCCACTGCCCCTCATACATCAAACTCTGGCGGTAGTTTGGAGAGTCAAGAAGATTTGCCCTTGGAACAGTCTCAACATAGCTCTAACAGGGTAAAGGTGGATGTGTTGACAATGATTGAGGACCTCCAAGTTCAGTTCTTTCGACTTCTACAGAGAATTGGGCAGACACCGAACAATTTGCTAGTGGAAAAGGTCCTGTATCGAATACATCTAGCAACTTTGATACAGGTAGGAGAATCCGATCTCAAAAGAGTAAATTTTGAAAGAGGCAAAGCCAGAGAAAAAGCAGCTGAACAAGAAGCAGCTGGGATACCAGAATCAAGCTTCACATTTAGAGTACTTGTATTGGGAAAAACAGGAGTTGGCAAGAGTGCTACAATAAATTCCCTCTTTGATCAAGCAAAAACTGCAACGGATGCATTTCAACCTGCAACCGATCGTATTCAGGAGATTGTGGGAACGATCAATGGGATTAAAGTATCCATCATTGATACCCCCGGTCTTTCCCAATCATCCTCGGGAAATATGAAGAGAAATAAGAAAATCTTGTTTTCTGTGAAGAGATATATAAGGAAATCCCCACCAGATATCGTTTTGTACTTCGAGCGCCTTGACCTCATAAACAAGAATCATGCTGACTACTTTTTAATGAAGCTAATAAATGAGGTCTTTGGTCCTGCAATTTGGTTCAACACCATCCTAGTCTTGACACATTGTTCCTCAGCTCTTCCAGAAGGACCTGATGGATATCCTGTCTCCTTCGAATCGTATGTGTCCCATTGCTCAGAGCTTTTGCAGCAAAATATACATCAGGCAGTGTCAGACCCAAGACTTGAAAATCCCGTCCTCTTGGTCGAGAACCATCCTCAGTGTAAGAAAAATATTATGGGGGAAAAAGTTCTTCCAAATGGGCAGGTCTGGAGATCACATTTCTTGTTGTTGTGCATTTGTTATAAAGTTCTGGGCAGCATTAATACCCTATTGAAATTTCAAAATTGCATTGAGCTAGGGCCATTAGCTAATACCCGGCTGCCTTCACTTCCCCACTTACTCTCATCTATTTTACGGCACCGAAATACGACAAGTCCATCAGGTGTAGACTATGACAGTGAAGCTATTATACTCAGGGACAATGAAGAAGATGAGTACGATGATCTACCTTCGATTCGCATTCTGACGAAATCCCAATTCGATAAGCTGTCGAACTCACAGAAAAAGGAATACCTGGATGAGCTGGAATACAGGGAAACTCTATATTTAAAGAAACAGCTAAGAGAAGAGTATCAAAGGAGGAAGGAAATCAAGCTTTTAAAACATAGAGACTCGGAACACAATGATAATAATGGTGATTTGCAGCCATCGCCAGAGGCGGAAGCTGTTCTGCTTCCAGATATGGCTGTTCCACCAAGTTTTGACTCAGATTGTCCTGTTCATAGATATCGTTGCATTGCAGTAGATGATCAGTGGATTGTGAGACCTGTTCTTGACCCACAAGGATGGGACCATGATGTAGGCTTCGATGGGATAAATCTCGAAACAGCAATGGAGATGAACAAAAATGTTTTTACCTCAGTCACTGGACAGGTGAGTAAAGATAAGCGTTTCTTTAACATTCAATCTGAGTGTGCTGCTTCTTACATGGATTCTAGGGGATCTTCTTATACTTTAGGTCTAGATGTTCAATCTTCTGGTACAGATAGGATATACACTGTTCATAGTAATGCTAAGCTGGGTAGCATTAAGCACAACCATCCTGGAATTGGACTTTCTCTGATATCTTTCAAGAGAAATTGCTATTATGGTGTGAAGCTTGAAGATACCATATCTATAGGTAAGCGAGTGAGGCTCGTAGCCAATGGCGGTCGTATAGAAGGAGCAGGACAAATGGCATATGGTGGAAGCATAGTAGCTACTTTAAGAGGTGATGACTACCCAGTGAGGAATGACCATCTCAGTCTAACGATGACCGTCCTCTCTTTTGACAAGGAAACCATCCTGAGCGGGAATGTAGAGTCTGAGTTTCGGGTTAGCCGAAGCATGAGACTGTCGGTTAATGCCAACTTAAATACACGTAAAATGGGTCAGATCTGCATAAAAACAAGTAGCTGTGAGCATTTGCAGATTGCTTTGATTTCTGGTTTTACAATCTTGAGAGCCCTTCTGCGTAGAAAGGAAATTGAAACGTTGTAG

mRNA sequence

ATGGTTTTTTCTACTTCTCACTTTGCAGGCAATGGAGACTGTTGTATTGCTCATAGAGTATTTTCGGGCATATTGCGATCTGATGTCATGTGTATGGCATGTGGTTTTACATCGACAACTTATGATCCATGTGTAGACATCTCTTTGGATTTGGAACCAAATCAAGCGGGATCTGCGAAGATGGCGGCCACAAGGAATCTTCCTTGCAATGGCGAGGCAGATTGCATGAACTCGAGCCAAAACCAGCGGCTATCTTCCCTGGTGGGTTGTTTGGATCAATTCACTAGACCCGAAAAACTCGGGTCCGACCAAAAATTCTTCTGCCAACAGTGTCAAGTGCGGCAGGAATCACTCAAACAGATGTCCATAAGAAAGCTTCCATTAGTTTCTTGTTTCCACATTAAAAGATTCGAGCATTCTTCAGTTCGAAAAATGTCAAGGAAGGTGGACCGATATTTGCAGTTTCCGTTTTCTTTAGACATGGCACCTTATCTCTCATCTTCAATCTTGAGAAGTCGATTTGGTAATAGGATTTTTCCTTTTGATGGAGATGAACAAGATGGTTGTAATGAGACATCGTCTGAGTTCGAGTTGTTTGCCGTTATCACTCACAAAGGAAAATTGGACGCTGGTCATTACGTGACCTACTTGCGGCTAAGTAATCAATGGTATAAGTGCGATGATGCTTGGATTACCCAAGTCAACGAAAACATCGTCAGGGCTGCACAAGGATACATGATGTTTTATGTGCAGAAGATGCTCTATTACAAATCTAGAATCGATATTGTTTTCAGTGACAAGCTGAGCTCTAAGTGGATGCCTACACATTCTAGTAGAAGATCCAGGCGTGCCCAAACTTTTTGGGGAGGATCATTGTCAGATCCCTACTATTTGAAGGGAACTTCTGTACTTGGAGTTGTGGCTCAGCAGATTACTGATCTCTCTTCACATACCATGAAGAAGAGTTTCCAAATTGTGTTTCTGTCTTATCCCTTCTCTCTCGCCTTAGCCCTCGCAATTTTGCTCGCTCCTTTGTCCTCACCGTACTCGTCAATCGGAATCGGAATCGGAATCTCAATCTGCCGGACCTTTGTTGGCAGAATGAAGGGTGTTAGAAACTGGTTGTTTTCTCAATTAGTATCCAAGTCAGTGGTTTCATCAAGACCATTACTGGGGAGTGACAGTTTCTTTGGTGAGGAAAATAAAGAACATGTGGATGAAGACCAAGATGGCGAAGTTGCACAAGCAACCACTATTGTACCGCCCACTGCCCCTCATACATCAAACTCTGGCGGTAGTTTGGAGAGTCAAGAAGATTTGCCCTTGGAACAGTCTCAACATAGCTCTAACAGGGTAAAGGTGGATGTGTTGACAATGATTGAGGACCTCCAAGTTCAGTTCTTTCGACTTCTACAGAGAATTGGGCAGACACCGAACAATTTGCTAGTGGAAAAGGTCCTGTATCGAATACATCTAGCAACTTTGATACAGGTAGGAGAATCCGATCTCAAAAGAGTAAATTTTGAAAGAGGCAAAGCCAGAGAAAAAGCAGCTGAACAAGAAGCAGCTGGGATACCAGAATCAAGCTTCACATTTAGAGTACTTGTATTGGGAAAAACAGGAGTTGGCAAGAGTGCTACAATAAATTCCCTCTTTGATCAAGCAAAAACTGCAACGGATGCATTTCAACCTGCAACCGATCGTATTCAGGAGATTGTGGGAACGATCAATGGGATTAAAGTATCCATCATTGATACCCCCGGTCTTTCCCAATCATCCTCGGGAAATATGAAGAGAAATAAGAAAATCTTGTTTTCTGTGAAGAGATATATAAGGAAATCCCCACCAGATATCGTTTTGTACTTCGAGCGCCTTGACCTCATAAACAAGAATCATGCTGACTACTTTTTAATGAAGCTAATAAATGAGGTCTTTGGTCCTGCAATTTGGTTCAACACCATCCTAGTCTTGACACATTGTTCCTCAGCTCTTCCAGAAGGACCTGATGGATATCCTGTCTCCTTCGAATCGTATGTGTCCCATTGCTCAGAGCTTTTGCAGCAAAATATACATCAGGCAGTGTCAGACCCAAGACTTGAAAATCCCGTCCTCTTGGTCGAGAACCATCCTCAGTGTAAGAAAAATATTATGGGGGAAAAAGTTCTTCCAAATGGGCAGGTCTGGAGATCACATTTCTTGTTGTTGTGCATTTGTTATAAAGTTCTGGGCAGCATTAATACCCTATTGAAATTTCAAAATTGCATTGAGCTAGGGCCATTAGCTAATACCCGGCTGCCTTCACTTCCCCACTTACTCTCATCTATTTTACGGCACCGAAATACGACAAGTCCATCAGGTGTAGACTATGACAGTGAAGCTATTATACTCAGGGACAATGAAGAAGATGAGTACGATGATCTACCTTCGATTCGCATTCTGACGAAATCCCAATTCGATAAGCTGTCGAACTCACAGAAAAAGGAATACCTGGATGAGCTGGAATACAGGGAAACTCTATATTTAAAGAAACAGCTAAGAGAAGAGTATCAAAGGAGGAAGGAAATCAAGCTTTTAAAACATAGAGACTCGGAACACAATGATAATAATGGTGATTTGCAGCCATCGCCAGAGGCGGAAGCTGTTCTGCTTCCAGATATGGCTGTTCCACCAAGTTTTGACTCAGATTGTCCTGTTCATAGATATCGTTGCATTGCAGTAGATGATCAGTGGATTGTGAGACCTGTTCTTGACCCACAAGGATGGGACCATGATGTAGGCTTCGATGGGATAAATCTCGAAACAGCAATGGAGATGAACAAAAATGTTTTTACCTCAGTCACTGGACAGGTGAGTAAAGATAAGCGTTTCTTTAACATTCAATCTGAGTGTGCTGCTTCTTACATGGATTCTAGGGGATCTTCTTATACTTTAGGTCTAGATGTTCAATCTTCTGGTACAGATAGGATATACACTGTTCATAGTAATGCTAAGCTGGGTAGCATTAAGCACAACCATCCTGGAATTGGACTTTCTCTGATATCTTTCAAGAGAAATTGCTATTATGGTGTGAAGCTTGAAGATACCATATCTATAGGTAAGCGAGTGAGGCTCGTAGCCAATGGCGGTCGTATAGAAGGAGCAGGACAAATGGCATATGGTGGAAGCATAGTAGCTACTTTAAGAGGTGATGACTACCCAGTGAGGAATGACCATCTCAGTCTAACGATGACCGTCCTCTCTTTTGACAAGGAAACCATCCTGAGCGGGAATGTAGAGTCTGAGTTTCGGGTTAGCCGAAGCATGAGACTGTCGGTTAATGCCAACTTAAATACACGTAAAATGGGTCAGATCTGCATAAAAACAAGTAGCTGTGAGCATTTGCAGATTGCTTTGATTTCTGGTTTTACAATCTTGAGAGCCCTTCTGCGTAGAAAGGAAATTGAAACGTTGTAG

Coding sequence (CDS)

ATGGTTTTTTCTACTTCTCACTTTGCAGGCAATGGAGACTGTTGTATTGCTCATAGAGTATTTTCGGGCATATTGCGATCTGATGTCATGTGTATGGCATGTGGTTTTACATCGACAACTTATGATCCATGTGTAGACATCTCTTTGGATTTGGAACCAAATCAAGCGGGATCTGCGAAGATGGCGGCCACAAGGAATCTTCCTTGCAATGGCGAGGCAGATTGCATGAACTCGAGCCAAAACCAGCGGCTATCTTCCCTGGTGGGTTGTTTGGATCAATTCACTAGACCCGAAAAACTCGGGTCCGACCAAAAATTCTTCTGCCAACAGTGTCAAGTGCGGCAGGAATCACTCAAACAGATGTCCATAAGAAAGCTTCCATTAGTTTCTTGTTTCCACATTAAAAGATTCGAGCATTCTTCAGTTCGAAAAATGTCAAGGAAGGTGGACCGATATTTGCAGTTTCCGTTTTCTTTAGACATGGCACCTTATCTCTCATCTTCAATCTTGAGAAGTCGATTTGGTAATAGGATTTTTCCTTTTGATGGAGATGAACAAGATGGTTGTAATGAGACATCGTCTGAGTTCGAGTTGTTTGCCGTTATCACTCACAAAGGAAAATTGGACGCTGGTCATTACGTGACCTACTTGCGGCTAAGTAATCAATGGTATAAGTGCGATGATGCTTGGATTACCCAAGTCAACGAAAACATCGTCAGGGCTGCACAAGGATACATGATGTTTTATGTGCAGAAGATGCTCTATTACAAATCTAGAATCGATATTGTTTTCAGTGACAAGCTGAGCTCTAAGTGGATGCCTACACATTCTAGTAGAAGATCCAGGCGTGCCCAAACTTTTTGGGGAGGATCATTGTCAGATCCCTACTATTTGAAGGGAACTTCTGTACTTGGAGTTGTGGCTCAGCAGATTACTGATCTCTCTTCACATACCATGAAGAAGAGTTTCCAAATTGTGTTTCTGTCTTATCCCTTCTCTCTCGCCTTAGCCCTCGCAATTTTGCTCGCTCCTTTGTCCTCACCGTACTCGTCAATCGGAATCGGAATCGGAATCTCAATCTGCCGGACCTTTGTTGGCAGAATGAAGGGTGTTAGAAACTGGTTGTTTTCTCAATTAGTATCCAAGTCAGTGGTTTCATCAAGACCATTACTGGGGAGTGACAGTTTCTTTGGTGAGGAAAATAAAGAACATGTGGATGAAGACCAAGATGGCGAAGTTGCACAAGCAACCACTATTGTACCGCCCACTGCCCCTCATACATCAAACTCTGGCGGTAGTTTGGAGAGTCAAGAAGATTTGCCCTTGGAACAGTCTCAACATAGCTCTAACAGGGTAAAGGTGGATGTGTTGACAATGATTGAGGACCTCCAAGTTCAGTTCTTTCGACTTCTACAGAGAATTGGGCAGACACCGAACAATTTGCTAGTGGAAAAGGTCCTGTATCGAATACATCTAGCAACTTTGATACAGGTAGGAGAATCCGATCTCAAAAGAGTAAATTTTGAAAGAGGCAAAGCCAGAGAAAAAGCAGCTGAACAAGAAGCAGCTGGGATACCAGAATCAAGCTTCACATTTAGAGTACTTGTATTGGGAAAAACAGGAGTTGGCAAGAGTGCTACAATAAATTCCCTCTTTGATCAAGCAAAAACTGCAACGGATGCATTTCAACCTGCAACCGATCGTATTCAGGAGATTGTGGGAACGATCAATGGGATTAAAGTATCCATCATTGATACCCCCGGTCTTTCCCAATCATCCTCGGGAAATATGAAGAGAAATAAGAAAATCTTGTTTTCTGTGAAGAGATATATAAGGAAATCCCCACCAGATATCGTTTTGTACTTCGAGCGCCTTGACCTCATAAACAAGAATCATGCTGACTACTTTTTAATGAAGCTAATAAATGAGGTCTTTGGTCCTGCAATTTGGTTCAACACCATCCTAGTCTTGACACATTGTTCCTCAGCTCTTCCAGAAGGACCTGATGGATATCCTGTCTCCTTCGAATCGTATGTGTCCCATTGCTCAGAGCTTTTGCAGCAAAATATACATCAGGCAGTGTCAGACCCAAGACTTGAAAATCCCGTCCTCTTGGTCGAGAACCATCCTCAGTGTAAGAAAAATATTATGGGGGAAAAAGTTCTTCCAAATGGGCAGGTCTGGAGATCACATTTCTTGTTGTTGTGCATTTGTTATAAAGTTCTGGGCAGCATTAATACCCTATTGAAATTTCAAAATTGCATTGAGCTAGGGCCATTAGCTAATACCCGGCTGCCTTCACTTCCCCACTTACTCTCATCTATTTTACGGCACCGAAATACGACAAGTCCATCAGGTGTAGACTATGACAGTGAAGCTATTATACTCAGGGACAATGAAGAAGATGAGTACGATGATCTACCTTCGATTCGCATTCTGACGAAATCCCAATTCGATAAGCTGTCGAACTCACAGAAAAAGGAATACCTGGATGAGCTGGAATACAGGGAAACTCTATATTTAAAGAAACAGCTAAGAGAAGAGTATCAAAGGAGGAAGGAAATCAAGCTTTTAAAACATAGAGACTCGGAACACAATGATAATAATGGTGATTTGCAGCCATCGCCAGAGGCGGAAGCTGTTCTGCTTCCAGATATGGCTGTTCCACCAAGTTTTGACTCAGATTGTCCTGTTCATAGATATCGTTGCATTGCAGTAGATGATCAGTGGATTGTGAGACCTGTTCTTGACCCACAAGGATGGGACCATGATGTAGGCTTCGATGGGATAAATCTCGAAACAGCAATGGAGATGAACAAAAATGTTTTTACCTCAGTCACTGGACAGGTGAGTAAAGATAAGCGTTTCTTTAACATTCAATCTGAGTGTGCTGCTTCTTACATGGATTCTAGGGGATCTTCTTATACTTTAGGTCTAGATGTTCAATCTTCTGGTACAGATAGGATATACACTGTTCATAGTAATGCTAAGCTGGGTAGCATTAAGCACAACCATCCTGGAATTGGACTTTCTCTGATATCTTTCAAGAGAAATTGCTATTATGGTGTGAAGCTTGAAGATACCATATCTATAGGTAAGCGAGTGAGGCTCGTAGCCAATGGCGGTCGTATAGAAGGAGCAGGACAAATGGCATATGGTGGAAGCATAGTAGCTACTTTAAGAGGTGATGACTACCCAGTGAGGAATGACCATCTCAGTCTAACGATGACCGTCCTCTCTTTTGACAAGGAAACCATCCTGAGCGGGAATGTAGAGTCTGAGTTTCGGGTTAGCCGAAGCATGAGACTGTCGGTTAATGCCAACTTAAATACACGTAAAATGGGTCAGATCTGCATAAAAACAAGTAGCTGTGAGCATTTGCAGATTGCTTTGATTTCTGGTTTTACAATCTTGAGAGCCCTTCTGCGTAGAAAGGAAATTGAAACGTTGTAG

Protein sequence

MVFSTSHFAGNGDCCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNQAGSAKMAATRNLPCNGEADCMNSSQNQRLSSLVGCLDQFTRPEKLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDEQDGCNETSSEFELFAVITHKGKLDAGHYVTYLRLSNQWYKCDDAWITQVNENIVRAAQGYMMFYVQKMLYYKSRIDIVFSDKLSSKWMPTHSSRRSRRAQTFWGGSLSDPYYLKGTSVLGVVAQQITDLSSHTMKKSFQIVFLSYPFSLALALAILLAPLSSPYSSIGIGIGISICRTFVGRMKGVRNWLFSQLVSKSVVSSRPLLGSDSFFGEENKEHVDEDQDGEVAQATTIVPPTAPHTSNSGGSLESQEDLPLEQSQHSSNRVKVDVLTMIEDLQVQFFRLLQRIGQTPNNLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVLVLGKTGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSGNMKRNKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTILVLTHCSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKNIMGEKVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELGPLANTRLPSLPHLLSSILRHRNTTSPSGVDYDSEAIILRDNEEDEYDDLPSIRILTKSQFDKLSNSQKKEYLDELEYRETLYLKKQLREEYQRRKEIKLLKHRDSEHNDNNGDLQPSPEAEAVLLPDMAVPPSFDSDCPVHRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNKNVFTSVTGQVSKDKRFFNIQSECAASYMDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGSIKHNHPGIGLSLISFKRNCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATLRGDDYPVRNDHLSLTMTVLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIKTSSCEHLQIALISGFTILRALLRRKEIETL

Homology

[Close]

BLAST of CmaCh05G012660 vs. ExPASy Swiss-Prot
Match: Q6S5G3 (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.1e-228
Identity = 416/791 (52.59%), Postives = 562/791 (71.05%), Query Frame = 0


Query: 368  MKGVRNWLFSQLVSKSVVSSRPLLGSDSFFGEENKEHVDEDQDGEVAQATTIVPPTAPHT 427
            MKG ++W+F+  +S S+ SSRPLLGSD FF + ++E  +  Q     Q  T+  P    +
Sbjct: 1    MKGFKDWVFA--LSNSMASSRPLLGSDPFFRDPHQEQDNHSQAPAAPQPVTLSEPPCSTS 60

Query: 428  SNSGGSLE-----SQEDLPLEQSQHSS---NRVKVDVLTMIEDLQVQFFRLLQRIGQTPN 487
            S+    LE     SQ+ +PLE    SS   N  K + L  I  LQVQF RL+QR GQ+ N
Sbjct: 61   SD----LEILPPLSQQQVPLESLYQSSIDLNGKKHNPLAKIGGLQVQFLRLVQRFGQSQN 120

Query: 488  NLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVLVLGK 547
            N+LV KVLYR+HLA LI+  ES+LK V   + +A+  A EQE++GIPE  F+ R+LVLGK
Sbjct: 121  NILVSKVLYRVHLAMLIRAEESELKNVKLRQDRAKALAREQESSGIPELDFSLRILVLGK 180

Query: 548  TGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSGNMKR 607
            TGVGKSATINS+F Q K+ TDAF+P TDRI+E++GT++G+KV+ IDTPG    SS + ++
Sbjct: 181  TGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRK 240

Query: 608  NKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTILVLTH 667
            N+KIL S+KRY++K PPD+VLY +RLD+I+  ++D+ L++LI E+FG AIW NTILV+TH
Sbjct: 241  NRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTH 300

Query: 668  CSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKNIMGE 727
             S+A  EG +G  V++ESYV    +++Q  IHQAVSD +LENPVLLVENHP CKKN+ GE
Sbjct: 301  -SAATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTKLENPVLLVENHPSCKKNLAGE 360

Query: 728  KVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELGPLANTRLPSLPHLLSSILRHR 787
             VLPNG VW+  F+ LC+C KVLG + +LL+F++ I LG  ++TR  SLPHLLS  LR R
Sbjct: 361  YVLPNGVVWKPQFMFLCVCTKVLGDVQSLLRFRDSIGLGQPSSTRTASLPHLLSVFLRRR 420

Query: 788  NTTSPSGVDYDSEAIILRD-NEEDEYDDLPSIRILTKSQFDKLSNSQKKEYLDELEYRET 847
             ++     + + + ++  D  EEDEYD LP+IRIL KS+F+KLS SQKKEYLDEL+YRET
Sbjct: 421  LSSGADETEKEIDKLLNLDLEEEDEYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRET 480

Query: 848  LYLKKQLREEYQRRKEIKLLKHRDSEHNDNNGDLQPSPEAEAVLLPDMAVPPSFDSDCPV 907
            LYLKKQL+EE +RR++ KL++  + E  +         +  AV LPDMA P SFDSD P 
Sbjct: 481  LYLKKQLKEECRRRRDEKLVEEENLEDTEQR-------DQAAVPLPDMAGPDSFDSDFPA 540

Query: 908  HRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNKNVFTSVTGQVSKDKRFFN 967
            HRYRC++  DQW+VRPV DPQGWD DVGFDGIN+ETA ++N+N+F S TGQVS+DK+ F 
Sbjct: 541  HRYRCVSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFT 600

Query: 968  IQSECAASY-MDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGSIKHNHPGIGLSLISFKR 1027
            IQSE  A+Y  + R  ++++ +D+QSSG D +Y+     KL + KHN   +G+ L SF  
Sbjct: 601  IQSETNAAYTRNFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGG 660

Query: 1028 NCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATLRGDDYPVRNDHLSLTMT 1087
              Y G KLEDT+ +GKRV+L AN G++ G+GQ A GGS  A +RG DYPVRN+ + LTMT
Sbjct: 661  KYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMT 720

Query: 1088 VLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIKTSSCEHLQIALISGFTI 1147
             LSF +E +L+  ++++FR +R   + VN N+N RKMG+I +K +S EH +IALIS  T+
Sbjct: 721  ALSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISALTM 777

Query: 1148 LRALLRRKEIE 1149
             +AL+RR + E
Sbjct: 781  FKALVRRSKTE 777

[Close]

BLAST of CmaCh05G012660 vs. ExPASy Swiss-Prot
Match: A9SV59 (Translocase of chloroplast 101, chloroplastic OS=Physcomitrium patens OX=3218 GN=TOC101 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.8e-162
Identity = 319/744 (42.88%), Postives = 461/744 (61.96%), Query Frame = 0


Query: 416  ATTIVPPTAPHTSNSGGSLESQEDLPLEQSQHSSNRVKVDVLTMIEDLQVQFFRLLQRIG 475
            A T +      T    G+  +Q     E++ +S      +    +++++V+F RL  R+G
Sbjct: 170  AATALDTAGRITQRPNGAPSTQLTATTEENANSDTAEGNETREKLQNIRVKFLRLAHRLG 229

Query: 476  QTPNNLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPES-SFTFRV 535
            Q+P N++V +VLYR+ LA  ++ G +  +   F   +A   A EQEAA   E   F   +
Sbjct: 230  QSPQNVVVAQVLYRLGLAESLRGGNTSNRAGAFSFDRANALAEEQEAANQEEELDFACTI 289

Query: 536  LVLGKTGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSS 595
            LVLGKTGVGKSATINS+FD  K+ T AF+P+T+++QEIVGT++GIKV +IDTPGL  S +
Sbjct: 290  LVLGKTGVGKSATINSIFDDRKSVTSAFKPSTNKVQEIVGTVHGIKVRVIDTPGLLPSVA 349

Query: 596  GNMKRNKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTI 655
             + + N++I+  VK++I+K+ PDIVLYF+RLD+ +++  D  L+K I ++FG A+WFN I
Sbjct: 350  -DQQHNERIMGQVKKHIKKASPDIVLYFDRLDMQSRDFGDLPLLKTITDLFGAAVWFNAI 409

Query: 656  LVLTHCSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKK 715
            +VLTH SSA P+GP+G P+S+E +V+  S ++QQ I QA  D RL NPV LVENHP C+ 
Sbjct: 410  VVLTHASSAPPDGPNGVPLSYEMFVAQRSHVVQQTIRQAAGDMRLMNPVSLVENHPACRT 469

Query: 716  NIMGEKVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELG-PLA-NTRLPSLPHLL 775
            N  G++VLPNGQ+W+   LLLC   K+L   N+LLK Q     G P    +R+P LP LL
Sbjct: 470  NRNGQRVLPNGQIWKPQLLLLCFASKILAEANSLLKLQETATPGRPFGQRSRVPPLPFLL 529

Query: 776  SSILRHR----------NTTSPSGVDYDSEAIILRDNEEDEYDDLPSIRILTKSQFDKLS 835
            SS+L+ R          + +  S  D + E     D+E D+YD+LP  R L+K + ++L+
Sbjct: 530  SSLLQSRAQLKLPDEQLDESDESDDDEEEE-----DSEADDYDELPPFRPLSKEELEELT 589

Query: 836  NSQKKEYLDELEYRETLYLKKQLREEYQRRKEIKLLKHRDSEHN----DNNGDLQPSPEA 895
              Q+++Y+DEL  RE L+ KKQ REE +RRKE+K  + + S+      D   D    P A
Sbjct: 590  KEQRQDYMDELADRERLFQKKQYREEMRRRKEMKKRQAQMSKEELAQPDEADDEAGQPAA 649

Query: 896  EAVLLPDMAVPPSFDSDCPVHRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEM 955
              V +PDMA+PPSFDSD P HRYR +   +QW+VRPVL+  GWDHD G+DG N+E    +
Sbjct: 650  VPVPMPDMALPPSFDSDNPTHRYRYLETANQWLVRPVLETHGWDHDAGYDGFNVEKMFVV 709

Query: 956  NKNVFTSVTGQVSKDKRFFNIQSECAASYMDSRGSSYTLGLDVQSSGTDRIYTVHSNAKL 1015
               +  S++GQV+KDK+   +  E AAS     G     G DVQ+ G D  YT+ +  + 
Sbjct: 710  KNKIPASISGQVTKDKKESQVNFEAAASLKHGEGKVTLTGFDVQTIGKDLAYTLRAETRF 769

Query: 1016 GSIKHNHPGIGLSLISFKRNCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVA 1075
             + K N    G++          GVKLED I IGKRV++V NGG + G G  A+GGS+ A
Sbjct: 770  NNFKRNKTTAGVTATYLNDTIAAGVKLEDRILIGKRVKMVVNGGVLTGKGDKAFGGSLEA 829

Query: 1076 TLRGDDYPVRNDHLSLTMTVLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQIC 1135
            TLRG +YP+     +L ++V+ +  +  + GN++S+F V ++M +   ANLN R  GQ+ 
Sbjct: 830  TLRGKEYPLSRTLSTLGLSVMDWHGDLAIGGNLQSQFMVGKTMMVG-RANLNNRGSGQVS 889

Query: 1136 IKTSSCEHLQIALISGFTILRALL 1143
            I+ SS E LQ+ LI    ILR+L+
Sbjct: 890  IRASSSEQLQMVLIGIVPILRSLI 906

[Close]

BLAST of CmaCh05G012660 vs. ExPASy Swiss-Prot
Match: A9SY65 (Translocase of chloroplast 108, chloroplastic OS=Physcomitrium patens OX=3218 GN=TOC108 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.7e-160
Identity = 315/742 (42.45%), Postives = 458/742 (61.73%), Query Frame = 0


Query: 416  ATTIVPPTAPHTSNSGGSLESQEDLPLEQSQHSSNRVKVDVLTMIEDLQVQFFRLLQRIG 475
            A T       +T    G+L +Q     ++S  S      +    +++++V+F RL  R+G
Sbjct: 246  AATASDSPGRNTQRPNGALSTQITSTTDESASSDAAEGDETREKLQNIRVKFLRLAHRLG 305

Query: 476  QTPNNLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPES-SFTFRV 535
            Q+P N++V +VLYR+ LA  ++ G +  +   F   +A   A EQEAA   E   F   +
Sbjct: 306  QSPQNVVVAQVLYRLGLAESLRGGSAPNRSGAFSFDRANALAEEQEAANQEEELDFACTI 365

Query: 536  LVLGKTGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSS 595
            LVLGKTGVGKS+TINS+FD+ K+ T AF+P+T+++QE++GT++GIKV +IDTPGL  S +
Sbjct: 366  LVLGKTGVGKSSTINSIFDERKSVTSAFKPSTNKVQEVIGTVHGIKVRVIDTPGLLPSVA 425

Query: 596  GNMKRNKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTI 655
             + + N++I+  VK+YI+K+ PDIVLYF+RLD+ +++  D  L++ I ++FG A+WFN I
Sbjct: 426  -DQQHNERIMGQVKKYIKKASPDIVLYFDRLDMQSRDFGDLPLLRTITDLFGAAVWFNAI 485

Query: 656  LVLTHCSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKK 715
            +VLTH SSA P+GP+G P+S+E +V+  S ++QQ I QA  D RL NPV LVENHP C+ 
Sbjct: 486  VVLTHASSAPPDGPNGVPLSYEMFVAQRSHVVQQTIRQAAGDMRLMNPVSLVENHPACRT 545

Query: 716  NIMGEKVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELG-PLA-NTRLPSLPHLL 775
            N  G++VLPNGQ+W+   LLLC   K+L   N+LLK Q     G P    +R+P LP LL
Sbjct: 546  NRTGQRVLPNGQIWKPQLLLLCFASKILAEANSLLKLQETTAPGRPFGQRSRVPPLPFLL 605

Query: 776  SSILRHR--------NTTSPSGVDYDSEAIILRDNEEDEYDDLPSIRILTKSQFDKLSNS 835
            SS+L+ R                D D E     D++ D+YD+LP  R L+K + + L+  
Sbjct: 606  SSLLQSRAQLKLPDEQAGESDESDDDEEE---EDSDADDYDELPPFRPLSKEELEDLTKE 665

Query: 836  QKKEYLDELEYRETLYLKKQLREEYQRRKEIKLLKHRDSEHN----DNNGDLQPSPEAEA 895
            Q+++Y++EL  RE ++ KKQ REE +RRKE K  + + S+      +   D   +  A  
Sbjct: 666  QREDYMEELADRERMFQKKQYREEIRRRKEAKKRQAQMSKEELAEAEEAEDEAGNAAAVP 725

Query: 896  VLLPDMAVPPSFDSDCPVHRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNK 955
            V +PDMA+PPSFDSD P HRYR +   +QW+VRPVL+  GWDHD G+DG N+E    + +
Sbjct: 726  VPMPDMALPPSFDSDNPTHRYRYLETANQWLVRPVLETHGWDHDAGYDGFNVEKMFVVKE 785

Query: 956  NVFTSVTGQVSKDKRFFNIQSECAASYMDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGS 1015
             +  SV+GQV+KDK+   +  E AAS     G     G DVQ+ G D  YTV +  +  +
Sbjct: 786  KIPASVSGQVTKDKKEAQVNFEAAASLRHGEGKVTLTGFDVQTIGKDLAYTVRAETRFNN 845

Query: 1016 IKHNHPGIGLSLISFKRNCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATL 1075
             K N    G++          GVKLED + IGKRV+LV NGG + G G  AYGGS+ ATL
Sbjct: 846  FKRNKTTAGVTATYLNDTIAAGVKLEDRVLIGKRVKLVVNGGVLTGKGDKAYGGSLEATL 905

Query: 1076 RGDDYPVRNDHLSLTMTVLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIK 1135
            RG +YP+     +L ++V+ +  +  + GN++S+F V ++M +   ANLN R  GQ+ I+
Sbjct: 906  RGKEYPLSRTLSTLGLSVMDWHGDLAIGGNLQSQFMVGKTMMVG-RANLNNRGSGQVSIR 965

Query: 1136 TSSCEHLQIALISGFTILRALL 1143
             SS E LQ+ LI    ILR+L+
Sbjct: 966  ASSSEQLQMVLIGIVPILRSLI 982

[Close]

BLAST of CmaCh05G012660 vs. ExPASy Swiss-Prot
Match: A9SY64 (Translocase of chloroplast 125, chloroplastic OS=Physcomitrium patens OX=3218 GN=TOC125 PE=2 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.1e-159
Identity = 316/740 (42.70%), Postives = 448/740 (60.54%), Query Frame = 0


Query: 416  ATTIVPPTAPHTSNSGGSLESQEDLPLEQSQHSSNRVKVDVLTMIEDLQVQFFRLLQRIG 475
            ATT      P+T++S  S  +  D  +      +N ++      +++++++F RL +R+ 
Sbjct: 397  ATTATGVPRPNTASSTQS-AATSDASISSESSEANEIR----EKLQNIRIKFLRLARRLN 456

Query: 476  QTPNNLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVL 535
            Q+P N++V +VLYR+ LA  ++ G S  +   F    A   A EQEAA   +  F   +L
Sbjct: 457  QSPQNVVVAQVLYRLGLAESLRGGSSLNRTRAFSFDHANALAEEQEAAKYEDLDFACTIL 516

Query: 536  VLGKTGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSG 595
            VLGKTGVGKSATINS+FD+ KT T A+ P+T ++ E+ GT+ G+KV  IDTPGL  S++ 
Sbjct: 517  VLGKTGVGKSATINSIFDECKTVTSAYYPSTTKVHEVSGTVLGVKVRFIDTPGLLPSTA- 576

Query: 596  NMKRNKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTIL 655
            + + NK I+  VK+YI+K  PDIVLYF+R+D+  ++  D  L++ I +VFG A+WFN  +
Sbjct: 577  DQRHNKNIMRQVKKYIKKVSPDIVLYFDRMDMQTRDSGDVPLLRTITDVFGAAVWFNATV 636

Query: 656  VLTHCSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKN 715
            VLTH S A P+G +G P+S++ +V+  S  +QQ I QA  D RL+NPV LVENHP C+ N
Sbjct: 637  VLTHASKAPPDGSNGTPMSYDYFVAQRSHFVQQTIRQAAGDARLQNPVSLVENHPACRIN 696

Query: 716  IMGEKVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELG-PLA-NTRLPSLPHLLS 775
              G++VLPNGQ W+   LLLC   K+L   NTLLK Q     G P    +R+P LP+LLS
Sbjct: 697  RSGQRVLPNGQPWKQQLLLLCFASKILAEANTLLKLQEASTPGKPFGQRSRVPPLPYLLS 756

Query: 776  SILRHR------NTTSPSGVDYDSEAIILRDNEEDEYDDLPSIRILTKSQFDKLSNSQKK 835
            S+L+ R      +       D D ++    + E DEYDDLP  R L+K + + LS  Q++
Sbjct: 757  SLLQSRAQLKMPDEQHGESEDSDDDSDEEDEEEGDEYDDLPPFRPLSKQELEDLSKEQRQ 816

Query: 836  EYLDELEYRETLYLKKQLREEYQRRKEIK-----LLKHRDSEHNDNNGDLQPSPEAEAVL 895
            EY +EL  RE L+ KKQ RE+ +RR+E K     + K   S   D   D    P   AV 
Sbjct: 817  EYAEELADRERLFQKKQYREQIRRRRERKKQASVMSKEEPSIPGDGAEDESGQPATVAVP 876

Query: 896  LPDMAVPPSFDSDCPVHRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNKNV 955
            +PDMA+PPSFDSD P HRYR +   +QW+VRPVL+  GWDHD G+DG N+E    + + +
Sbjct: 877  MPDMALPPSFDSDNPTHRYRYLETANQWLVRPVLETHGWDHDAGYDGFNVEKMFVVKEKI 936

Query: 956  FTSVTGQVSKDKRFFNIQSECAASYMDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGSIK 1015
              SV+GQV+KDK+   +  E AAS     G     G DVQ+ G D  YTV +  +  + K
Sbjct: 937  PASVSGQVTKDKKEAQVNFEAAASLRHGEGKVTLTGFDVQTIGKDLAYTVRAETRFNNFK 996

Query: 1016 HNHPGIGLSLISFKRNCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATLRG 1075
             N    G++          GVKLED + IGKRV+LV NGG + G G  AYGGS+ ATLRG
Sbjct: 997  RNKTTAGVTATYLNDTIAAGVKLEDRVLIGKRVKLVVNGGVLTGKGDKAYGGSLEATLRG 1056

Query: 1076 DDYPVRNDHLSLTMTVLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIKTS 1135
             +YP+     +L ++V+ +  +  + GN++S+F V ++M +   ANLN R  GQ+ I+ S
Sbjct: 1057 KEYPLSRTLSTLGLSVMDWHGDLAIGGNLQSQFMVGKTMMVG-RANLNNRGSGQVSIRAS 1116

Query: 1136 SCEHLQIALISGFTILRALL 1143
            S E LQ+ LI    ILR+L+
Sbjct: 1117 SSEQLQMVLIGIVPILRSLI 1129

[Close]

BLAST of CmaCh05G012660 vs. ExPASy Swiss-Prot
Match: A9SV60 (Translocase of chloroplast 126, chloroplastic OS=Physcomitrium patens OX=3218 GN=TOC126 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-158
Identity = 308/695 (44.32%), Postives = 438/695 (63.02%), Query Frame = 0


Query: 460  IEDLQVQFFRLLQRIGQTPNNLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAE 519
            +++++V+F RL+ R+GQ+P N++V +VLYR+ LA  ++ G +      F+  +A   A E
Sbjct: 444  LQNIRVKFLRLVHRLGQSPQNVVVAQVLYRLGLAESLRGGSTRNHTRAFDFDRANAIAEE 503

Query: 520  QEAAGIPES-SFTFRVLVLGKTGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTING 579
            QEA    E   F   +LVLGKTGVGKSATINS+FD+ K+ T+A+ P+T  + E+VGT+ G
Sbjct: 504  QEADNQEEELDFACTILVLGKTGVGKSATINSIFDEHKSVTNAYNPSTTNVYEVVGTMLG 563

Query: 580  IKVSIIDTPGLSQSSSGNMKRNKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLM 639
            +KV  +DTPGL   S  + + N++I+  VK+YI+K+ PDIVLYF+R+D+  +   D  L+
Sbjct: 564  VKVRFVDTPGL-LFSVADQRHNERIMGRVKKYIKKASPDIVLYFDRMDMQTREFGDVPLL 623

Query: 640  KLINEVFGPAIWFNTILVLTHCSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPR 699
            + I  VFG A+WFNTI+VLTH S+A P+GP+G P+ +E +V+  S  +QQ+I Q   D R
Sbjct: 624  RTITNVFGTAVWFNTIVVLTHASTAPPDGPNGTPMGYELFVAQRSHSVQQSIRQVAGDMR 683

Query: 700  LENPVLLVENHPQCKKNIMGEKVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELG 759
            L+NPV LVENHP C+ N  G++VLPNGQ+W+ H +LLC   K+L   NTLLK Q+    G
Sbjct: 684  LQNPVSLVENHPACRANRNGQRVLPNGQIWKPHLMLLCFASKILAEANTLLKLQDTAAPG 743

Query: 760  -PLA-NTRLPSLPHLLSSILRHRNTTS--PSGVDYDSEAIILRDNEE--DEYDDLPSIRI 819
             P    +R+P LP LLSS+L+ R         +D   E+    ++EE  DEYDDLP  R 
Sbjct: 744  RPFGQRSRVPPLPFLLSSLLQSRAQLKLPDEQLDESDESDDDEEDEEEGDEYDDLPPFRS 803

Query: 820  LTKSQFDKLSNSQKKEYLDELEYRETLYLKKQLREEYQRRKEIK-----LLKHRDSEHND 879
            L+K + ++LS  Q++EY +EL  RE L+ KKQ RE+ QRRKE+K     + K   S   D
Sbjct: 804  LSKEELEELSKDQRQEYAEELAVRERLFQKKQHREQLQRRKEMKKRATAMRKEGLSHPAD 863

Query: 880  NNGDLQPSPEAEAVLLPDMAVPPSFDSDCPVHRYRCIAVDDQWIVRPVLDPQGWDHDVGF 939
               D    P A  V +PDMA+PPSFDSD P HRYR +   +QW+VRPVL+  GWDHD G+
Sbjct: 864  EADDEAGQPAAVPVPMPDMALPPSFDSDNPTHRYRYLETANQWLVRPVLETHGWDHDAGY 923

Query: 940  DGINLETAMEMNKNVFTSVTGQVSKDKRFFNIQSECAASYMDSRGSSYTLGLDVQSSGTD 999
            DG N+E    +   +  S++GQV+KDK+   +  E AAS     G     G DVQ+ G D
Sbjct: 924  DGFNVEKMFVVKNKIPASISGQVTKDKKESQVNFEAAASLKHGEGKVTLTGFDVQTIGKD 983

Query: 1000 RIYTVHSNAKLGSIKHNHPGIGLSLISFKRNCYYGVKLEDTISIGKRVRLVANGGRIEGA 1059
              YT+ +  +  + K N    G++          GVKLED I IGKRV++V NGG + G 
Sbjct: 984  LAYTLRAETRFNNFKRNKTTAGVTATYLNDTIAAGVKLEDRILIGKRVKMVVNGGVLTGK 1043

Query: 1060 GQMAYGGSIVATLRGDDYPVRNDHLSLTMTVLSFDKETILSGNVESEFRVSRSMRLSVNA 1119
            G  A+GGS+ ATLRG +YP+     +L ++V+ +  +  + GN++S+F V ++M +   A
Sbjct: 1044 GDKAFGGSLEATLRGKEYPLSRTLSTLGLSVMDWHGDLAIGGNLQSQFMVGKTMMVG-RA 1103

Query: 1120 NLNTRKMGQICIKTSSCEHLQIALISGFTILRALL 1143
            NLN R  GQ+ I+ SS E LQ+ LI    ILR+L+
Sbjct: 1104 NLNNRGSGQVSIRASSSEQLQMVLIGIVPILRSLI 1136

[Close]

BLAST of CmaCh05G012660 vs. TAIR 10
Match: AT5G20300.1 (Avirulence induced gene (AIG1) family protein )

HSP 1 Score: 795.0 bits (2052), Expect = 7.8e-230
Identity = 416/791 (52.59%), Postives = 562/791 (71.05%), Query Frame = 0


Query: 368  MKGVRNWLFSQLVSKSVVSSRPLLGSDSFFGEENKEHVDEDQDGEVAQATTIVPPTAPHT 427
            MKG ++W+F+  +S S+ SSRPLLGSD FF + ++E  +  Q     Q  T+  P    +
Sbjct: 1    MKGFKDWVFA--LSNSMASSRPLLGSDPFFRDPHQEQDNHSQAPAAPQPVTLSEPPCSTS 60

Query: 428  SNSGGSLE-----SQEDLPLEQSQHSS---NRVKVDVLTMIEDLQVQFFRLLQRIGQTPN 487
            S+    LE     SQ+ +PLE    SS   N  K + L  I  LQVQF RL+QR GQ+ N
Sbjct: 61   SD----LEILPPLSQQQVPLESLYQSSIDLNGKKHNPLAKIGGLQVQFLRLVQRFGQSQN 120

Query: 488  NLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVLVLGK 547
            N+LV KVLYR+HLA LI+  ES+LK V   + +A+  A EQE++GIPE  F+ R+LVLGK
Sbjct: 121  NILVSKVLYRVHLAMLIRAEESELKNVKLRQDRAKALAREQESSGIPELDFSLRILVLGK 180

Query: 548  TGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSGNMKR 607
            TGVGKSATINS+F Q K+ TDAF+P TDRI+E++GT++G+KV+ IDTPG    SS + ++
Sbjct: 181  TGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRK 240

Query: 608  NKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTILVLTH 667
            N+KIL S+KRY++K PPD+VLY +RLD+I+  ++D+ L++LI E+FG AIW NTILV+TH
Sbjct: 241  NRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTH 300

Query: 668  CSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKNIMGE 727
             S+A  EG +G  V++ESYV    +++Q  IHQAVSD +LENPVLLVENHP CKKN+ GE
Sbjct: 301  -SAATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTKLENPVLLVENHPSCKKNLAGE 360

Query: 728  KVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELGPLANTRLPSLPHLLSSILRHR 787
             VLPNG VW+  F+ LC+C KVLG + +LL+F++ I LG  ++TR  SLPHLLS  LR R
Sbjct: 361  YVLPNGVVWKPQFMFLCVCTKVLGDVQSLLRFRDSIGLGQPSSTRTASLPHLLSVFLRRR 420

Query: 788  NTTSPSGVDYDSEAIILRD-NEEDEYDDLPSIRILTKSQFDKLSNSQKKEYLDELEYRET 847
             ++     + + + ++  D  EEDEYD LP+IRIL KS+F+KLS SQKKEYLDEL+YRET
Sbjct: 421  LSSGADETEKEIDKLLNLDLEEEDEYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRET 480

Query: 848  LYLKKQLREEYQRRKEIKLLKHRDSEHNDNNGDLQPSPEAEAVLLPDMAVPPSFDSDCPV 907
            LYLKKQL+EE +RR++ KL++  + E  +         +  AV LPDMA P SFDSD P 
Sbjct: 481  LYLKKQLKEECRRRRDEKLVEEENLEDTEQR-------DQAAVPLPDMAGPDSFDSDFPA 540

Query: 908  HRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNKNVFTSVTGQVSKDKRFFN 967
            HRYRC++  DQW+VRPV DPQGWD DVGFDGIN+ETA ++N+N+F S TGQVS+DK+ F 
Sbjct: 541  HRYRCVSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFT 600

Query: 968  IQSECAASY-MDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGSIKHNHPGIGLSLISFKR 1027
            IQSE  A+Y  + R  ++++ +D+QSSG D +Y+     KL + KHN   +G+ L SF  
Sbjct: 601  IQSETNAAYTRNFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGG 660

Query: 1028 NCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATLRGDDYPVRNDHLSLTMT 1087
              Y G KLEDT+ +GKRV+L AN G++ G+GQ A GGS  A +RG DYPVRN+ + LTMT
Sbjct: 661  KYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMT 720

Query: 1088 VLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIKTSSCEHLQIALISGFTI 1147
             LSF +E +L+  ++++FR +R   + VN N+N RKMG+I +K +S EH +IALIS  T+
Sbjct: 721  ALSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISALTM 777

Query: 1148 LRALLRRKEIE 1149
             +AL+RR + E
Sbjct: 781  FKALVRRSKTE 777

[Close]

BLAST of CmaCh05G012660 vs. TAIR 10
Match: AT5G20300.2 (Avirulence induced gene (AIG1) family protein )

HSP 1 Score: 795.0 bits (2052), Expect = 7.8e-230
Identity = 416/791 (52.59%), Postives = 562/791 (71.05%), Query Frame = 0


Query: 368  MKGVRNWLFSQLVSKSVVSSRPLLGSDSFFGEENKEHVDEDQDGEVAQATTIVPPTAPHT 427
            MKG ++W+F+  +S S+ SSRPLLGSD FF + ++E  +  Q     Q  T+  P    +
Sbjct: 1    MKGFKDWVFA--LSNSMASSRPLLGSDPFFRDPHQEQDNHSQAPAAPQPVTLSEPPCSTS 60

Query: 428  SNSGGSLE-----SQEDLPLEQSQHSS---NRVKVDVLTMIEDLQVQFFRLLQRIGQTPN 487
            S+    LE     SQ+ +PLE    SS   N  K + L  I  LQVQF RL+QR GQ+ N
Sbjct: 61   SD----LEILPPLSQQQVPLESLYQSSIDLNGKKHNPLAKIGGLQVQFLRLVQRFGQSQN 120

Query: 488  NLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVLVLGK 547
            N+LV KVLYR+HLA LI+  ES+LK V   + +A+  A EQE++GIPE  F+ R+LVLGK
Sbjct: 121  NILVSKVLYRVHLAMLIRAEESELKNVKLRQDRAKALAREQESSGIPELDFSLRILVLGK 180

Query: 548  TGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSGNMKR 607
            TGVGKSATINS+F Q K+ TDAF+P TDRI+E++GT++G+KV+ IDTPG    SS + ++
Sbjct: 181  TGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRK 240

Query: 608  NKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTILVLTH 667
            N+KIL S+KRY++K PPD+VLY +RLD+I+  ++D+ L++LI E+FG AIW NTILV+TH
Sbjct: 241  NRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTH 300

Query: 668  CSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKNIMGE 727
             S+A  EG +G  V++ESYV    +++Q  IHQAVSD +LENPVLLVENHP CKKN+ GE
Sbjct: 301  -SAATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTKLENPVLLVENHPSCKKNLAGE 360

Query: 728  KVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELGPLANTRLPSLPHLLSSILRHR 787
             VLPNG VW+  F+ LC+C KVLG + +LL+F++ I LG  ++TR  SLPHLLS  LR R
Sbjct: 361  YVLPNGVVWKPQFMFLCVCTKVLGDVQSLLRFRDSIGLGQPSSTRTASLPHLLSVFLRRR 420

Query: 788  NTTSPSGVDYDSEAIILRD-NEEDEYDDLPSIRILTKSQFDKLSNSQKKEYLDELEYRET 847
             ++     + + + ++  D  EEDEYD LP+IRIL KS+F+KLS SQKKEYLDEL+YRET
Sbjct: 421  LSSGADETEKEIDKLLNLDLEEEDEYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRET 480

Query: 848  LYLKKQLREEYQRRKEIKLLKHRDSEHNDNNGDLQPSPEAEAVLLPDMAVPPSFDSDCPV 907
            LYLKKQL+EE +RR++ KL++  + E  +         +  AV LPDMA P SFDSD P 
Sbjct: 481  LYLKKQLKEECRRRRDEKLVEEENLEDTEQR-------DQAAVPLPDMAGPDSFDSDFPA 540

Query: 908  HRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNKNVFTSVTGQVSKDKRFFN 967
            HRYRC++  DQW+VRPV DPQGWD DVGFDGIN+ETA ++N+N+F S TGQVS+DK+ F 
Sbjct: 541  HRYRCVSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFT 600

Query: 968  IQSECAASY-MDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGSIKHNHPGIGLSLISFKR 1027
            IQSE  A+Y  + R  ++++ +D+QSSG D +Y+     KL + KHN   +G+ L SF  
Sbjct: 601  IQSETNAAYTRNFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGG 660

Query: 1028 NCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATLRGDDYPVRNDHLSLTMT 1087
              Y G KLEDT+ +GKRV+L AN G++ G+GQ A GGS  A +RG DYPVRN+ + LTMT
Sbjct: 661  KYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMT 720

Query: 1088 VLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIKTSSCEHLQIALISGFTI 1147
             LSF +E +L+  ++++FR +R   + VN N+N RKMG+I +K +S EH +IALIS  T+
Sbjct: 721  ALSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISALTM 777

Query: 1148 LRALLRRKEIE 1149
             +AL+RR + E
Sbjct: 781  FKALVRRSKTE 777

[Close]

BLAST of CmaCh05G012660 vs. TAIR 10
Match: AT5G20300.3 (Avirulence induced gene (AIG1) family protein )

HSP 1 Score: 709.5 bits (1830), Expect = 4.3e-204
Identity = 356/656 (54.27%), Postives = 482/656 (73.48%), Query Frame = 0


Query: 495  LIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVLVLGKTGVGKSATINSLFDQ 554
            LI+  ES+LK V   + +A+  A EQE++GIPE  F+ R+LVLGKTGVGKSATINS+F Q
Sbjct: 2    LIRAEESELKNVKLRQDRAKALAREQESSGIPELDFSLRILVLGKTGVGKSATINSIFGQ 61

Query: 555  AKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSGNMKRNKKILFSVKRYIRKS 614
             K+ TDAF+P TDRI+E++GT++G+KV+ IDTPG    SS + ++N+KIL S+KRY++K 
Sbjct: 62   PKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKR 121

Query: 615  PPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTILVLTHCSSALPEGPDGYPVS 674
            PPD+VLY +RLD+I+  ++D+ L++LI E+FG AIW NTILV+TH S+A  EG +G  V+
Sbjct: 122  PPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTH-SAATTEGRNGQSVN 181

Query: 675  FESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKNIMGEKVLPNGQVWRSHFLL 734
            +ESYV    +++Q  IHQAVSD +LENPVLLVENHP CKKN+ GE VLPNG VW+  F+ 
Sbjct: 182  YESYVGQRMDVVQHYIHQAVSDTKLENPVLLVENHPSCKKNLAGEYVLPNGVVWKPQFMF 241

Query: 735  LCICYKVLGSINTLLKFQNCIELGPLANTRLPSLPHLLSSILRHRNTTSPSGVDYDSEAI 794
            LC+C KVLG + +LL+F++ I LG  ++TR  SLPHLLS  LR R ++     + + + +
Sbjct: 242  LCVCTKVLGDVQSLLRFRDSIGLGQPSSTRTASLPHLLSVFLRRRLSSGADETEKEIDKL 301

Query: 795  ILRD-NEEDEYDDLPSIRILTKSQFDKLSNSQKKEYLDELEYRETLYLKKQLREEYQRRK 854
            +  D  EEDEYD LP+IRIL KS+F+KLS SQKKEYLDEL+YRETLYLKKQL+EE +RR+
Sbjct: 302  LNLDLEEEDEYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRETLYLKKQLKEECRRRR 361

Query: 855  EIKLLKHRDSEHNDNNGDLQPSPEAEAVLLPDMAVPPSFDSDCPVHRYRCIAVDDQWIVR 914
            + KL++  + E  +         +  AV LPDMA P SFDSD P HRYRC++  DQW+VR
Sbjct: 362  DEKLVEEENLEDTEQR-------DQAAVPLPDMAGPDSFDSDFPAHRYRCVSAGDQWLVR 421

Query: 915  PVLDPQGWDHDVGFDGINLETAMEMNKNVFTSVTGQVSKDKRFFNIQSECAASY-MDSRG 974
            PV DPQGWD DVGFDGIN+ETA ++N+N+F S TGQVS+DK+ F IQSE  A+Y  + R 
Sbjct: 422  PVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFTIQSETNAAYTRNFRE 481

Query: 975  SSYTLGLDVQSSGTDRIYTVHSNAKLGSIKHNHPGIGLSLISFKRNCYYGVKLEDTISIG 1034
             ++++ +D+QSSG D +Y+     KL + KHN   +G+ L SF    Y G KLEDT+ +G
Sbjct: 482  QTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVG 541

Query: 1035 KRVRLVANGGRIEGAGQMAYGGSIVATLRGDDYPVRNDHLSLTMTVLSFDKETILSGNVE 1094
            KRV+L AN G++ G+GQ A GGS  A +RG DYPVRN+ + LTMT LSF +E +L+  ++
Sbjct: 542  KRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTALSFKRELVLNYGLQ 601

Query: 1095 SEFRVSRSMRLSVNANLNTRKMGQICIKTSSCEHLQIALISGFTILRALLRRKEIE 1149
            ++FR +R   + VN N+N RKMG+I +K +S EH +IALIS  T+ +AL+RR + E
Sbjct: 602  TQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISALTMFKALVRRSKTE 649

[Close]

BLAST of CmaCh05G012660 vs. TAIR 10
Match: AT3G16620.1 (translocon outer complex protein 120 )

HSP 1 Score: 547.4 bits (1409), Expect = 2.8e-155
Identity = 299/719 (41.59%), Postives = 448/719 (62.31%), Query Frame = 0


Query: 435  ESQEDLPLEQSQHSSNRVKVDVLTMIEDLQVQFFRLLQRIGQTPNNLLVEKVLYRIHLAT 494
            ++++    E  +H   R K      ++ ++V+F RL  R+GQTP+N++V +VLYR+ LA 
Sbjct: 367  QAEDSTTAETDEHDETREK------LQFIRVKFLRLSHRLGQTPHNVVVAQVLYRLGLAE 426

Query: 495  LIQVGESDLKRVNFERGKAREKAAEQEAAGIPESSFTFRVLVLGKTGVGKSATINSLFDQ 554
             ++ G +  +   F   +A   A + EAA      F+  ++VLGK+GVGKSATINS+FD+
Sbjct: 427  QLR-GRNGSRVGAFSFDRASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDE 486

Query: 555  AKTATDAFQPATDRIQEIVGTINGIKVSIIDTPGLSQSSSGNMKRNKKILFSVKRYIRKS 614
             K +TDAFQ  T ++Q+I G + GIKV +IDTPGL  S S +  +N+KIL SV+ +I+KS
Sbjct: 487  LKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWS-DQHKNEKILKSVRAFIKKS 546

Query: 615  PPDIVLYFERLDLINKNHADYFLMKLINEVFGPAIWFNTILVLTHCSSALPEGPDGYPVS 674
            PPDIVLY +RLD+ +++  D  L++ I +VFGP+IWFN I+ LTH +SA P+GP+G   S
Sbjct: 547  PPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASS 606

Query: 675  FESYVSHCSELLQQNIHQAVSDPRLENPVLLVENHPQCKKNIMGEKVLPNGQVWRSHFLL 734
            ++ +V+  S ++QQ I QA  D RL NPV LVENH  C+ N  G++VLPNGQVW+ H LL
Sbjct: 607  YDMFVTQRSHVIQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLL 666

Query: 735  LCICYKVLGSINTLLKFQNCIELGPLA-NTRLPSLPHLLSSILRHRNTTSPSGVDYDSE- 794
            L    K+L   N LLK Q+ I  G  A  ++ P LP LLSS+L+ R         YD E 
Sbjct: 667  LSFASKILAEANALLKLQDNIPGGQFATRSKAPPLPLLLSSLLQSRPQAKLPEQQYDDED 726

Query: 795  -----AIILRDNEEDEYDDLPSIRILTKSQFDKLSNSQKKEYLDELEYRETLYLKKQLRE 854
                        EE EYD+LP  + LTK++  KLS SQKKEYLDE+EYRE L++K+Q++E
Sbjct: 727  DEDDLDESSDSEEESEYDELPPFKRLTKAEMTKLSKSQKKEYLDEMEYREKLFMKRQMKE 786

Query: 855  EYQRRKEIKL----LKHRDSEHNDNNGDLQPSPEAEAVLLPDMAVPPSFDSDCPVHRYRC 914
            E +RRK +K     +K   + +++N  + +  P +  V +PD+++P SFDSD P HRYR 
Sbjct: 787  ERKRRKLLKKFAAEIKDMPNGYSENVEEERSEPASVPVPMPDLSLPASFDSDNPTHRYRY 846

Query: 915  IAVDDQWIVRPVLDPQGWDHDVGFDGINLETAMEMNKNVFTSVTGQVSKDKRFFNIQSEC 974
            +   +QW+VRPVL+  GWDHD+G++G+N E    +   +  S +GQV+KDK+  ++Q E 
Sbjct: 847  LDTSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLEL 906

Query: 975  AASYMDSRGSSYTLGLDVQSSGTDRIYTVHSNAKLGSIKHNHPGIGLSLISFKRNCYYGV 1034
            A+S     G S +LG D+Q++G +  YT+ S  +    + N    GLS+     +   G+
Sbjct: 907  ASSVKHGEGRSTSLGFDMQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGL 966

Query: 1035 KLEDTISIGKRVRLVANGGRIEGAGQMAYGGSIVATLRGDDYPVRNDHLSLTMTVLSFDK 1094
            K+ED +   KR R+V +GG +   G +AYGG++ A  R  DYP+     +L ++V+ +  
Sbjct: 967  KVEDKLIANKRFRMVMSGGAMTSRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHG 1026

Query: 1095 ETILSGNVESEFRVSRSMRLSVNANLNTRKMGQICIKTSSCEHLQIALISGFTILRALL 1143
            +  + GN++S+  + RS  L   ANLN R  GQ+ I+ +S E LQ+A+++   + + LL
Sbjct: 1027 DLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSIRVNSSEQLQLAVVALVPLFKKLL 1077

[Close]

BLAST of CmaCh05G012660 vs. TAIR 10
Match: AT2G16640.1 (multimeric translocon complex in the outer envelope membrane 132 )

HSP 1 Score: 544.3 bits (1401), Expect = 2.4e-154
Identity = 308/749 (41.12%), Postives = 454/749 (60.61%), Query Frame = 0


Query: 413  VAQATTIVPPT--APHTS--NSGGS----LESQEDLPLEQSQHSSNRVKVDVLTMIEDLQ 472
            + +A+ ++ P   AP  S  N  GS     ++++    E  +H   R K+ +      ++
Sbjct: 455  LGRASPLLEPASRAPQQSRVNGNGSHNQFQQAEDSTTTEADEHDETREKLQL------IR 514

Query: 473  VQFFRLLQRIGQTPNNLLVEKVLYRIHLATLIQVGESDLKRVNFERGKAREKAAEQEAAG 532
            V+F RL  R+GQTP+N++V +VLYR+ LA  ++ G +  +   F   +A   A + EAAG
Sbjct: 515  VKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLR-GRNGSRVGAFSFDRASAMAEQLEAAG 574

Query: 533  IPESSFTFRVLVLGKTGVGKSATINSLFDQAKTATDAFQPATDRIQEIVGTINGIKVSII 592
                 F+  ++VLGK+GVGKSATINS+FD+ K  TDAFQ  T R+Q++ G + GIKV +I
Sbjct: 575  QDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVI 634

Query: 593  DTPGLSQSSSGNMKRNKKILFSVKRYIRKSPPDIVLYFERLDLINKNHADYFLMKLINEV 652
            DTPGL  S S   K N+KIL SVK +I+K+PPDIVLY +RLD+ +++  D  L++ I++V
Sbjct: 635  DTPGLLPSWSDQAK-NEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDV 694

Query: 653  FGPAIWFNTILVLTHCSSALPEGPDGYPVSFESYVSHCSELLQQNIHQAVSDPRLENPVL 712
            FGP+IWFN I+ LTH +S  P+GP+G   S++ +V+  S ++QQ I QA  D RL NPV 
Sbjct: 695  FGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMRLMNPVS 754

Query: 713  LVENHPQCKKNIMGEKVLPNGQVWRSHFLLLCICYKVLGSINTLLKFQNCIELGPL-ANT 772
            LVENH  C+ N  G++VLPNGQVW+ H LLL    K+L   N LLK Q+ I   P  A +
Sbjct: 755  LVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNIPGRPFAARS 814

Query: 773  RLPSLPHLLSSILRHRNTTSPSGVDYDSE------AIILRDNEEDEYDDLPSIRILTKSQ 832
            + P LP LLSS+L+ R         Y  E            +EE EYD LP  + LTK+Q
Sbjct: 815  KAPPLPFLLSSLLQSRPQPKLPEQQYGDEEDEDDLEESSDSDEESEYDQLPPFKSLTKAQ 874

Query: 833  FDKLSNSQKKEYLDELEYRETLYLKKQLREEYQRRKEIKL----LKHRDSEHNDNNGDLQ 892
               LS SQKK+YLDE+EYRE L +KKQ++EE +RRK  K     +K     +++N  +  
Sbjct: 875  MATLSKSQKKQYLDEMEYREKLLMKKQMKEERKRRKMFKKFAAEIKDLPDGYSENVEEES 934

Query: 893  PSPEAEAVLLPDMAVPPSFDSDCPVHRYRCIAVDDQWIVRPVLDPQGWDHDVGFDGINLE 952
              P +  V +PD+++P SFDSD P HRYR +   +QW+VRPVL+  GWDHD+G++G+N E
Sbjct: 935  GGPASVPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDIGYEGVNAE 994

Query: 953  TAMEMNKNVFTSVTGQVSKDKRFFNIQSECAASYMDSRGSSYTLGLDVQSSGTDRIYTVH 1012
                + + +  SV+GQV+KDK+  N+Q E A+S     G S +LG D+Q+ G +  YT+ 
Sbjct: 995  RLFVVKEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQTVGKELAYTLR 1054

Query: 1013 SNAKLGSIKHNHPGIGLSLISFKRNCYYGVKLEDTISIGKRVRLVANGGRIEGAGQMAYG 1072
            S  +  + + N    GLS+     +   G+K+ED     K  R+V +GG +   G  AYG
Sbjct: 1055 SETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYG 1114

Query: 1073 GSIVATLRGDDYPVRNDHLSLTMTVLSFDKETILSGNVESEFRVSRSMRLSVNANLNTRK 1132
            G++ A LR  DYP+     +L ++V+ +  +  + GN++S+  + RS  L   ANLN R 
Sbjct: 1115 GTLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRG 1174

Query: 1133 MGQICIKTSSCEHLQIALISGFTILRALL 1143
             GQ+ ++ +S E LQ+A+++   + + LL
Sbjct: 1175 AGQVSVRVNSSEQLQLAMVAIVPLFKKLL 1195

The following BLAST results are available for this feature:

BLAST of CmaCh05G012660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6S5G3	1.1e-228	52.59	Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A9SV59	6.8e-162	42.88	Translocase of chloroplast 101, chloroplastic OS=Physcomitrium patens OX=3218 GN...	[more]
A9SY65	3.7e-160	42.45	Translocase of chloroplast 108, chloroplastic OS=Physcomitrium patens OX=3218 GN...	[more]
A9SY64	3.1e-159	42.70	Translocase of chloroplast 125, chloroplastic OS=Physcomitrium patens OX=3218 GN...	[more]
A9SV60	1.6e-158	44.32	Translocase of chloroplast 126, chloroplastic OS=Physcomitrium patens OX=3218 GN...	[more]

BLAST of CmaCh05G012660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20300.1	7.8e-230	52.59	Avirulence induced gene (AIG1) family protein	[more]
AT5G20300.2	7.8e-230	52.59	Avirulence induced gene (AIG1) family protein	[more]
AT5G20300.3	4.3e-204	54.27	Avirulence induced gene (AIG1) family protein	[more]
AT3G16620.1	2.8e-155	41.59	translocon outer complex protein 120	[more]
AT2G16640.1	2.4e-154	41.12	multimeric translocon complex in the outer envelope membrane 132	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006703	AIG1-type guanine nucleotide-binding (G) domain	PFAM	PF04548	AIG1	coord: 533..688 e-value: 4.4E-23 score: 81.7
IPR006703	AIG1-type guanine nucleotide-binding (G) domain	PROSITE	PS51720	G_AIG1	coord: 529..769 score: 27.528889
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 13..249 e-value: 1.3E-22 score: 80.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 502..748 e-value: 1.6E-54 score: 187.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 527..689
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 4..253 e-value: 2.1E-57 score: 196.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..447
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..447
None	No IPR available	PANTHER	PTHR10903:SF68	TRANSLOCASE OF CHLOROPLAST 90, CHLOROPLASTIC	coord: 415..1147
IPR024283	Translocase of chloroplast 159/132, membrane anchor domain	PFAM	PF11886	TOC159_MAD	coord: 880..1144 e-value: 1.4E-111 score: 371.7
IPR005690	Translocase of chloroplast Toc86/159	TIGRFAM	TIGR00993	TIGR00993	coord: 419..1143 e-value: 1.4E-206 score: 686.1
IPR045058	GTPase GIMA/IAN/Toc	PANTHER	PTHR10903	GTPASE, IMAP FAMILY MEMBER-RELATED	coord: 415..1147
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00973	USP_2	coord: 196..213
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 1..252 score: 35.511234
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 13..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G012660.1	CmaCh05G012660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004843	thiol-dependent deubiquitinase