CmaCh05G012320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G012320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Biotin carboxyl carrier protein of acetyl-CoA carboxylase
Location	Cma_Chr05: 9465871 .. 9470811 (-)
RNA-Seq Expression	CmaCh05G012320
Synteny	CmaCh05G012320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCCCATTTCCCATTGGCAAGTGGCAGCAAAAGGCGAGCGAGTTAATCTTCATCTCCCCTCTTCCCACTCTCGCGCCTCATTGGTTTCATCGTCCGCCGTCCACCCGCCACCTGCAACGCCTCCTCCTTCCTTCTCCGTTGGGCGGAGTTTCCTAAGCAATACCTTTCTTTTACTTCCGACGAATCAATTTCACTTGCCCTCTCGAATCAGATTCGCTTCTTTCCAGCTAATACCCAATGGCTTCCTCGCTCGCTTCAGCCTCAGCTGCTTCCGCAGTGGCCAAATCTCCTTGCACGGCCATAGCTCGCCGCAATATCAACCACAAGAACTCTCATTGCGCGCTCTCTTTTCGGCTCCCTCACAAGCCCAAACTCCGAATCTTCACCAGGGTATGCGCCAATTCATCTCCCTCGTCGAATGATAAGTAGAATTTCTGTCCTATTTGTGCTAATTGTGGTTATTTTATGTGTTGCGCTTCTGATTTACGATTATTCCGCACTGTGATCTTCTGCGTTGCTTTTGAATTCGTTGGTGGCTACATTTGCACTTCGTGATTGGAAAAACAAACGGGAAGAATGTGTTTGGAGGGTTCTTTTAAATGAAATTTTTGGACTGTTTTATTGGTATAGAGATTTTAAGGAGCGAAAGAGATAACGGGGTACAAATTGTTAGGAATCACGGATCTCCACAATGGTACGATATTGTCCGCTTCGAGCATAAATTCTCAAGGCTTTGCTTTTGTTCGATATTTGAGAATTTTATTTACATGTCTAAGTTAAGGACATGACTTTGATATCAGGTTAGGAATCACATATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAACTCTCATACCAAAGGAGATTTATTCCTTACTTATGAGCTCATGTTCATCTACGTAATTAGCCAATGGGGACTCCCTCCCAACAATCCTCAACAATGGACATATTAACTTTGTCACCATTAAAGAATGTGATTTAATCATTATGTTGCAGGGTGTGCAGCCTGTTCGTAAGCATCTAACTCCTGTACAGGCACAGTTGAATGAGGTATGTATGCTCACATCAAATTACTATATCAAATAGGATTTTATTTTGTTGAAGTATTAACTCTTTCCTAACGTGCTGTTCTTGAAGTCGTCTATTTCATTGAAGGATCCTGTTGATGCACCTAATGCTGCAAAAGTTTCATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCCAAACCATTGAGTGATCAATCTTCTAAAGTTTTGGCAACGGAAGAGTCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTCATCAAGTTAGCTAGCTCAATCTGTGACCTTCTCCTCTAAAATAACCTACACATGGATGTGCTATAACATTTTTTTACCTGCTTGCAGACTGGTTGATTCCAGAGATATTGTAGAGTTGCAACTGAAACAGCTCGACTGTGAAGTGATAATCCGAAAAAAGGAGGCCTTATTACCACAGCCTCCTGCTGCCATTCCTATGCCGTATGCACCCCCACCTTCAGTAGCACAGTCAGTTCCTCCCCCTGTGCCTGCTGCACTGCCAGCGCCCGCTTCTCCTGTTTCAAGCCTGCCATCTTCACCTCCTGCTGCTAAGTCGGCCAAGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCAGGCACATTCTACCGTAGTCCAGGACCTGGGGAGCCACCATTTGTTAAGGTAAGTTTATTGGAATGGCTCTGCTGCAACTTCTTATTTGATTGTCTTGGGGCTTATTTGTGGGGTTCTTCATATAGGTTGGAGATAAAGTACAGAAAGGACAAGTCTTGTGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGTAAGATTTCCCCTCTTTATCCATTTAAATCTTATGAATGCGAAAAGTTATATTGAATTTTACCATCGTTAGATTTGATCCAATTCTACCACTGCTTGCTATCTCATTGTCTTACTTTAGTTTTATTTCCGTTCTCTGTTTGATTTGCTAACAATATATTCCATACTTACCATAGTATTGTCCATTCTGCGGGAATATTGACTGTTTATGGCAACCTGATCATGGGTGAAACAACCACTGTTTTTCCTCTGTAGTAAACATTCACCTCTCTTGTTACATTTCAAAGAATATTGGTGTGACTGAATATAGGAAAAATGGAGCAATAATAGTGAGATGTCACATAGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAACCTTGAGAGGAAACCTGAAAGGGAAAATCCTAAAGAGGACAATGTCTGCTAGCGGTGGACTTGGGCCGTTAGAAATGATATCAGAGCCAGACACCGGGCAATGTGCCAGCGACGAGGTTGAGCTCCGAAGGGGATGGACACGAGGCGGTGTGCCATCAAGGACGTTGGAACCCGTAGGGAGAGTCCCACATCGATTGGATTAAGGAAAGAGTGCCAGCGAGGACACTGGGCCTCAAAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAATGAAGCATTGTTTATAATGGTATGGAAACCTCTCCCTAGCAAACGCGTTTTAAAAACCTTGATGGGAAGTCTGAAAGAGAAAGCCCAAAGAGAACAATATTTGCTAACGGTGGGTTTGGGTTATTACAAATTTCAATTGAGTTAACATTTCTACAAACAATATAGGGAGACAGAATTAGATCTGACCATTGTAGTTTGTTTCGTATTGTTCCATGAGAACAATTTACCCCTACAAGATAATCGGTAGTAAATCTCCTATCAGTCCTGTCCAACCCACAACTAATATTTGGTTTTTTGATCATTCCTAGTGATTCTATTTATAGATCAACAAGCTGTTGTCAAACAATGTATGAAAAACTGCAAAGGAAGCTTACACAAAGGTGCTCCAATTGGTATTATTTACAAAAGAAAAAAAAAAGACATGCATCACGAAGATGTCTTATAACACAAGGACACAGTTGCCTAGAACATATCCTATTCAATTAAAGTCACGGCCTCAAGAAGAAACCCTGAAGTGAATAGCCTCCCACACATGGTCCCAACCCTCTCTATCTTAAAATTTTTGAAAGTTTCTTTCCTTACTGGCTGCAATCCACATAAATTTGAGCATTGGGATTCAGATCCAAACCATAAAGCCTCTGGTTCAAGGACCTAACACCATCTTCATGGGAGCACCAAGAAATACCAAAAGAATTAAGTAGGGCGAACCACCATTTTTAGCTAATTTGGCAACAGAAAATAAATCCTCTGTGTTATTAAAGAATAAATGAACAACAATCGTGAGATTGAACAAAACGATGTAGGGGCTTTTGAATTACATCAGTTGTGCTTAATCCATTAAACAATTGTGGGATCCCACATCGGTTGGAGAGGGGAATGAGACATTCCTTATAAGAGCGTGGAAACCTCTCTTGAGAAGACGTGTCTTAAAACCGTGAGGCTGACGGCGATACGTAAGGGACCAAAGTAGACAATATTTGCTAGCAATGGGCTTGGGGTTGCTACAAATGGTATCAGAGCTAGTCATCGAGCGGTGTGCCAACGAGTGGATTATGAGATCCTACATCAGTCAGAGAGGGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAATCGTGAAGTTGACGATGATACGTAACTGGCCAAAACGGACAAATATTTACTAGTGGGGGGCTTGGGGGCTTAGGCTTGGGTTGTTACAAAGGTCCTAAGTTCGTTTTGGAACATGAAATATAGTTGGGAACACCATTTTAAATTCAACTTCATTACATCAATATTTCAACTCTCCTCTCCCTTCTAGATATGGAAATCTGAAGAGAGCCCAAACAAGTGGAAACCAATATTAGTTGGAAAGGAATGGTGTTACACGGGTTTGAACATAGAAGCTTATCTTATGATACCATGTTAAATCACCACTAAACTCATAAGCCTAGCTGACGGGTTACGATAGATTTAATTATATCAATATTTCAACAAAAAGTTCGAGAAATTTAGCAAGAAAGTGTGTTTACAATAGATTAGAACTTGTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTATTAGCTAATCTCTGCTCTTAAAAAAATTTAATTTACAGGCCGATCAATCTGGAACCATAGTCGAGGTTCTTGCAGAGGACGGGAAGCCTGTCAGCGTTGGTGTGGTAAGTCATTCTAACCACCATTACAGTTACTGTAATGAATAGCTTAACTCTACATTGTTTGTTTGTATGGATTTGTGGGCTTGAACCTTCTTTTGGTTTCTCTGCAGCCTTTGTTTGTCATTCAACCTTAGGCCAATCCGGGTTTCGATTACACGAGACGAGTAAAGGAGATGAGATTAAGCTGAGTTTGGGAAGCAAATTGAGTTTCCGAGCAAGTTCGGGTTGTGGGTTAGTTATTGGTAGTGCCCTTTTCCCCCCTTCTTTCGTTTTCCTCTTCAGTTGAGCGTAGTCATGATAGAGATTGTGTTGATAAAACATATCAATTCCTTTTCCAGTTTTCGTGTGAACTTTCAACTTTCTTTGTGAAATCAGATATATATTTTTTAAGCCTTTCTTTCTTTCTTTCCTTTCCTCTCCATCTAATACTGCTTTTCTCATCAATTCTGAAAGAATAGTCCATCTCCCCCACATCTTTTTTGATACAAGTTTTTGACATTGACACCTTTACTATCAGTTGCTTATCTCATTAATGTTGTATGGATGTAAGATTTTGGATCCTTTTGGTTCAGCTGTGTTTGAATGTACTTGTATGAAATAAAAAGTGCCC

mRNA sequence

GGTCCCATTTCCCATTGGCAAGTGGCAGCAAAAGGCGAGCGAGTTAATCTTCATCTCCCCTCTTCCCACTCTCGCGCCTCATTGGTTTCATCGTCCGCCGTCCACCCGCCACCTGCAACGCCTCCTCCTTCCTTCTCCGTTGGGCGGAGTTTCCTAAGCAATACCTTTCTTTTACTTCCGACGAATCAATTTCACTTGCCCTCTCGAATCAGATTCGCTTCTTTCCAGCTAATACCCAATGGCTTCCTCGCTCGCTTCAGCCTCAGCTGCTTCCGCAGTGGCCAAATCTCCTTGCACGGCCATAGCTCGCCGCAATATCAACCACAAGAACTCTCATTGCGCGCTCTCTTTTCGGCTCCCTCACAAGCCCAAACTCCGAATCTTCACCAGGGGTGTGCAGCCTGTTCGTAAGCATCTAACTCCTGTACAGGCACAGTTGAATGAGTCGTCTATTTCATTGAAGGATCCTGTTGATGCACCTAATGCTGCAAAAGTTTCATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCCAAACCATTGAGTGATCAATCTTCTAAAGTTTTGGCAACGGAAGAGTCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTCATCAAACTGGTTGATTCCAGAGATATTGTAGAGTTGCAACTGAAACAGCTCGACTGTGAAGTGATAATCCGAAAAAAGGAGGCCTTATTACCACAGCCTCCTGCTGCCATTCCTATGCCGTATGCACCCCCACCTTCAGTAGCACAGTCAGTTCCTCCCCCTGTGCCTGCTGCACTGCCAGCGCCCGCTTCTCCTGTTTCAAGCCTGCCATCTTCACCTCCTGCTGCTAAGTCGGCCAAGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCAGGCACATTCTACCGTAGTCCAGGACCTGGGGAGCCACCATTTGTTAAGGTTGGAGATAAAGTACAGAAAGGACAAGTCTTGTGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCCGATCAATCTGGAACCATAGTCGAGGTTCTTGCAGAGGACGGGAAGCCTGTCAGCGTTGGTGTGGTAAGTCATTCTAACCACCATTACAGTTACTCCTTTGTTTGTCATTCAACCTTAGGCCAATCCGGGTTTCGATTACACGAGACGAGTAAAGGAGATGAGATTAAGCTGAGTTTGGGAAGCAAATTGAGTTTCCGAGCAAGTTCGGGTTGTGGGTTAGTTATTGGTAGTGCCCTTTTCCCCCCTTCTTTCGTTTTCCTCTTCAGTTGAGCGTAGTCATGATAGAGATTGTGTTGATAAAACATATCAATTCCTTTTCCAGTTTTCGTGTGAACTTTCAACTTTCTTTGTGAAATCAGATATATATTTTTTAAGCCTTTCTTTCTTTCTTTCCTTTCCTCTCCATCTAATACTGCTTTTCTCATCAATTCTGAAAGAATAGTCCATCTCCCCCACATCTTTTTTGATACAAGTTTTTGACATTGACACCTTTACTATCAGTTGCTTATCTCATTAATGTTGTATGGATGTAAGATTTTGGATCCTTTTGGTTCAGCTGTGTTTGAATGTACTTGTATGAAATAAAAAGTGCCC

Coding sequence (CDS)

ATGGCTTCCTCGCTCGCTTCAGCCTCAGCTGCTTCCGCAGTGGCCAAATCTCCTTGCACGGCCATAGCTCGCCGCAATATCAACCACAAGAACTCTCATTGCGCGCTCTCTTTTCGGCTCCCTCACAAGCCCAAACTCCGAATCTTCACCAGGGGTGTGCAGCCTGTTCGTAAGCATCTAACTCCTGTACAGGCACAGTTGAATGAGTCGTCTATTTCATTGAAGGATCCTGTTGATGCACCTAATGCTGCAAAAGTTTCATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCCAAACCATTGAGTGATCAATCTTCTAAAGTTTTGGCAACGGAAGAGTCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTCATCAAACTGGTTGATTCCAGAGATATTGTAGAGTTGCAACTGAAACAGCTCGACTGTGAAGTGATAATCCGAAAAAAGGAGGCCTTATTACCACAGCCTCCTGCTGCCATTCCTATGCCGTATGCACCCCCACCTTCAGTAGCACAGTCAGTTCCTCCCCCTGTGCCTGCTGCACTGCCAGCGCCCGCTTCTCCTGTTTCAAGCCTGCCATCTTCACCTCCTGCTGCTAAGTCGGCCAAGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCAGGCACATTCTACCGTAGTCCAGGACCTGGGGAGCCACCATTTGTTAAGGTTGGAGATAAAGTACAGAAAGGACAAGTCTTGTGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCCGATCAATCTGGAACCATAGTCGAGGTTCTTGCAGAGGACGGGAAGCCTGTCAGCGTTGGTGTGGTAAGTCATTCTAACCACCATTACAGTTACTCCTTTGTTTGTCATTCAACCTTAGGCCAATCCGGGTTTCGATTACACGAGACGAGTAAAGGAGATGAGATTAAGCTGAGTTTGGGAAGCAAATTGAGTTTCCGAGCAAGTTCGGGTTGTGGGTTAGTTATTGGTAGTGCCCTTTTCCCCCCTTCTTTCGTTTTCCTCTTCAGTTGA

Protein sequence

MASSLASASAASAVAKSPCTAIARRNINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHLTPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFITQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEALLPQPPAAIPMPYAPPPSVAQSVPPPVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSVGVVSHSNHHYSYSFVCHSTLGQSGFRLHETSKGDEIKLSLGSKLSFRASSGCGLVIGSALFPPSFVFLFS

Homology

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BLAST of CmaCh05G012320 vs. ExPASy Swiss-Prot
Match: Q42533 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 3.0e-57
Identity = 155/281 (55.16%), Postives = 189/281 (67.26%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAIARRNINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS  S ++ +A A          +   +N    +SFRL  KPKLR  ++   P R   
Sbjct: 1   MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSY 60

Query: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFI 120
             V+AQ N+ S        + NAAKV   S     + ++   S  SS  LATEESISEF+
Sbjct: 61  PVVKAQSNKVSTGA-----SSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFL 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEAL-LPQPPAAIPMPYAP-PPSVAQSVP 180
           TQV++L+KLVDSRDIVELQLKQLDCE++IRKKEAL  PQ PA+  M   P  PS AQ + 
Sbjct: 121 TQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMA 180

Query: 181 PPV--PAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGD 240
           PP    AA PAP++P S  P SPP    AKSSLP +K PMAGTFYRSP PGEPPF+KVGD
Sbjct: 181 PPAAPAAAAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGD 240

Query: 241 KVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSV 278
           KVQKGQVLCI+EAMKLMNEIE+D +GT+V+++AEDGKPVS+
Sbjct: 241 KVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSL 271

[Close]

BLAST of CmaCh05G012320 vs. ExPASy Swiss-Prot
Match: Q42783 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 143/221 (64.71%), Postives = 166/221 (75.11%), Query Frame = 0


Query: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFI 120
           T V+AQLNE ++       +P     S E      +  AKPL++ SS VLAT+ES+S+FI
Sbjct: 43  TRVKAQLNEVALDSSSNATSPPMKAKSKE------EPPAKPLAEPSSSVLATQESVSQFI 102

Query: 121 TQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEALLPQPPAAIPMP---YAPPPSVAQSV 180
           TQV+SL+KLVDSRDIVEL+LKQ D EV IRKKEA +PQPP A P P   Y+PPP      
Sbjct: 103 TQVASLVKLVDSRDIVELKLKQHDVEVTIRKKEA-MPQPPPA-PQPSVVYSPPPPALP-- 162

Query: 181 PPPVPAALPAPA-SPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGD 240
           PPPVPA+ PAP  +  +  P+S PA KSAKSSLPPLK PMAGTFYRSP PGEP FVKVGD
Sbjct: 163 PPPVPASTPAPTLARATPTPTSAPAVKSAKSSLPPLKSPMAGTFYRSPAPGEPSFVKVGD 222

Query: 241 KVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSV 278
           KV+KGQV+CIIEAMKLMNEIEADQSGTIVE++AED K VSV
Sbjct: 223 KVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSV 253

[Close]

BLAST of CmaCh05G012320 vs. ExPASy Swiss-Prot
Match: Q9LLC1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 116 ISEFITQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEALLPQPPAAIPMPYAPPPSVAQ 175
           +SEF+ +VS L+KLVDS+DIVEL+LKQLDCE++IRKKEAL    P A P+ ++ PP +A 
Sbjct: 86  LSEFMAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPA-PVYHSMPPVMAD 145

Query: 176 -SVPPPVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKV 235
            S+PP  P ALP   +P S+ P++     +  SS PPLK PMAGTFYRSPGPGEPPFVKV
Sbjct: 146 FSMPPAQPVALPPSPTPTST-PATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVKV 205

Query: 236 GDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSV 278
           GDKVQKGQ++CIIEAMKLMNEIEA++SGTI+E+LAEDGKPVSV
Sbjct: 206 GDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSV 246

[Close]

BLAST of CmaCh05G012320 vs. ExPASy Swiss-Prot
Match: Q06881 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 68/170 (40.00%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 122 QVSSLIKLVDSRDIVELQLKQLDCEVIIRK----KEALLPQP------------PAAIPM 181
           ++  L+  +   DI E+ LK  D E+ +RK      +++P              P+AIP+
Sbjct: 7   EIRQLLTTIAQTDIAEVTLKSDDFELTVRKAVGVNNSVVPVVTAPLSGVVGSGLPSAIPI 66

Query: 182 PYAPPPSVAQSVPPPVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPG 241
                PS     P P P    A    V+S   S P AK     L  +  PM GTFYR+P 
Sbjct: 67  VAHAAPS-----PSPEPGTSRAADHAVTS-SGSQPGAKIIDQKLAEVASPMVGTFYRAPA 126

Query: 242 PGEPPFVKVGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPV 276
           PGE  FV+VGD++++GQ +CIIEAMKLMNEIEAD SG ++E+L ++G+PV
Sbjct: 127 PGEAVFVEVGDRIRQGQTVCIIEAMKLMNEIEADVSGQVIEILVQNGEPV 170

[Close]

BLAST of CmaCh05G012320 vs. ExPASy Swiss-Prot
Match: P37799 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-16
Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 120 ITQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEALLPQPPAAIPMPYAPPPSVAQSVPP 179
           I +V  LI+L++   I EL++++ +  V I +      QP       YA  P+ A  V  
Sbjct: 3   IRKVKKLIELLEESGIDELEIREGEESVRISRHSKTAAQP------VYAQAPAFAAPVAA 62

Query: 180 PVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 239
           P PAA    A+P ++   S PAA     ++  ++ PM GTFYR+  P    FV+VG  V+
Sbjct: 63  PAPAA----AAPAAAAAESAPAAPKLNGNV--VRSPMVGTFYRAASPTSANFVEVGQSVK 122

Query: 240 KGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPV 276
           KG +LCI+EAMK+MN IEA+ SGTI  +L E+G+PV
Sbjct: 123 KGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPV 146

[Close]

BLAST of CmaCh05G012320 vs. TAIR 10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1 )

HSP 1 Score: 223.8 bits (569), Expect = 2.2e-58
Identity = 155/281 (55.16%), Postives = 189/281 (67.26%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAIARRNINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS  S ++ +A A          +   +N    +SFRL  KPKLR  ++   P R   
Sbjct: 1   MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSY 60

Query: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFI 120
             V+AQ N+ S        + NAAKV   S     + ++   S  SS  LATEESISEF+
Sbjct: 61  PVVKAQSNKVSTGA-----SSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFL 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEAL-LPQPPAAIPMPYAP-PPSVAQSVP 180
           TQV++L+KLVDSRDIVELQLKQLDCE++IRKKEAL  PQ PA+  M   P  PS AQ + 
Sbjct: 121 TQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMA 180

Query: 181 PPV--PAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGD 240
           PP    AA PAP++P S  P SPP    AKSSLP +K PMAGTFYRSP PGEPPF+KVGD
Sbjct: 181 PPAAPAAAAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGD 240

Query: 241 KVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSV 278
           KVQKGQVLCI+EAMKLMNEIE+D +GT+V+++AEDGKPVS+
Sbjct: 241 KVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSL 271

[Close]

BLAST of CmaCh05G012320 vs. TAIR 10
Match: AT5G16390.2 (chloroplastic acetylcoenzyme A carboxylase 1 )

HSP 1 Score: 195.3 bits (495), Expect = 8.2e-50
Identity = 143/261 (54.79%), Postives = 170/261 (65.13%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAIARRNINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS  S ++ +A A          +   +N    +SFRL  KPKLR  ++   P R   
Sbjct: 1   MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSY 60

Query: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFI 120
             V+AQ N+ S        + NAAKV   S     + ++   S  SS  LATEESISEF+
Sbjct: 61  PVVKAQSNKVSTGA-----SSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFL 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEAL-LPQPPAAIPMPYAP-PPSVAQSVP 180
           TQV++L+KLVDSRDIVELQLKQLDCE++IRKKEAL  PQ PA+  M   P  PS AQ + 
Sbjct: 121 TQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMA 180

Query: 181 PPV--PAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGD 240
           PP    AA PAP++P S  P SPP    AKSSLP +K PMAGTFYRSP PGEPPF+KVGD
Sbjct: 181 PPAAPAAAAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGD 240

Query: 241 KVQKGQVLCIIEAMKLMNEIE 258
           KVQKGQVLCI+EAMKLMNEIE
Sbjct: 241 KVQKGQVLCIVEAMKLMNEIE 251

[Close]

BLAST of CmaCh05G012320 vs. TAIR 10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2 )

HSP 1 Score: 185.3 bits (469), Expect = 8.5e-47
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 116 ISEFITQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEALLPQPPAAIPMPYAPPPSVAQ 175
           +SEF+ +VS L+KLVDS+DIVEL+LKQLDCE++IRKKEAL    P A P+ ++ PP +A 
Sbjct: 86  LSEFMAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPA-PVYHSMPPVMAD 145

Query: 176 -SVPPPVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKV 235
            S+PP  P ALP   +P S+ P++     +  SS PPLK PMAGTFYRSPGPGEPPFVKV
Sbjct: 146 FSMPPAQPVALPPSPTPTST-PATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVKV 205

Query: 236 GDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSV 278
           GDKVQKGQ++CIIEAMKLMNEIEA++SGTI+E+LAEDGKPVSV
Sbjct: 206 GDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSV 246

The following BLAST results are available for this feature:

BLAST of CmaCh05G012320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42533	3.0e-57	55.16	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Ar...	[more]
Q42783	1.2e-56	64.71	Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glyc...	[more]
Q9LLC1	1.2e-45	66.87	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Ar...	[more]
Q06881	1.2e-16	40.00	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain ...	[more]
P37799	2.0e-16	40.38	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aerugin...	[more]

BLAST of CmaCh05G012320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16390.1	2.2e-58	55.16	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT5G16390.2	8.2e-50	54.79	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT5G15530.1	8.5e-47	66.87	biotin carboxyl carrier protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001249	Acetyl-CoA biotin carboxyl carrier	PRINTS	PR01071	ACOABIOTINCC	coord: 214..227 score: 69.44 coord: 246..259 score: 81.75 coord: 231..245 score: 65.19
IPR001249	Acetyl-CoA biotin carboxyl carrier	TIGRFAM	TIGR00531	TIGR00531	coord: 120..277 e-value: 2.5E-39 score: 133.2
None	No IPR available	GENE3D	2.40.50.100		coord: 210..280 e-value: 4.3E-31 score: 108.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..210
None	No IPR available	PANTHER	PTHR43416:SF21	BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE, CHLOROPLASTIC	coord: 1..278
None	No IPR available	PANTHER	PTHR43416	DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED	coord: 1..278
None	No IPR available	CDD	cd06850	biotinyl_domain	coord: 212..278 e-value: 3.4637E-25 score: 94.7903
IPR000089	Biotin/lipoyl attachment	PFAM	PF00364	Biotin_lipoyl	coord: 212..278 e-value: 5.3E-23 score: 80.6
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 204..294 score: 21.185003
IPR001882	Biotin-binding site	PROSITE	PS00188	BIOTIN	coord: 241..258
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 211..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G012320.1	CmaCh05G012320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003989	acetyl-CoA carboxylase activity