CmaCh05G010650 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G010650
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily protein
LocationCma_Chr05: 8451322 .. 8451918 (-)
RNA-Seq ExpressionCmaCh05G010650
SyntenyCmaCh05G010650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGTTGCTTGCCTTGATTGTCGTCTTCCTTGTTGTTCAGTCAGCAATGGCTGACACTGAAACTGAGAACAGGATCAATAACTTGTGTCATGAAATGGAGGAATTTGGGTTTTGCAGCCAAACCTTCCATGAGAACCTGAACGGCCCGACAGACGACATAGGACTAACCCAAATAGCAATTGTCGAAGCCCAAGCCAATGCAAGCAATACACTTAGGTATGGTTGTTAAAAATACGAATAAAAAAAAAAATCACAAACTACTTAAGTTAATAGGTTAAGATAATACTACATTCTTAACAGGTATATTCAAGAGCTTCTTCCAACTATAACCGATCTTAAATTGAAGAACGACCTTATAATATGTGAAAATGCATACAAGACGGTGGATGAAGCACTTCAAGAAGGAATCGGCTTATTCTTCAAAAAGGATTATAGAGGCATGTTAATTGCCGTGAAGATTGCACCGAGAGCACAAGCAAGTTGCGACATGATTTTCAGTACACCTGTAAAGAAACGAGGTCTACTAGAGGAGAGGAACAGAGAGATACGGATTCTCGTTGCCATGGCTATAGTTTGTGGTTCCATCATTGTATCTTAA

mRNA sequence

ACGTTGCTTGCCTTGATTGTCGTCTTCCTTGTTGTTCAGTCAGCAATGGCTGACACTGAAACTGAGAACAGGATCAATAACTTGTGTCATGAAATGGAGGAATTTGGGTTTTGCAGCCAAACCTTCCATGAGAACCTGAACGGCCCGACAGACGACATAGGACTAACCCAAATAGCAATTGTCGAAGCCCAAGCCAATGCAAGCAATACACTTAGGTATATTCAAGAGCTTCTTCCAACTATAACCGATCTTAAATTGAAGAACGACCTTATAATATGTGAAAATGCATACAAGACGGTGGATGAAGCACTTCAAGAAGGAATCGGCTTATTCTTCAAAAAGGATTATAGAGGCATGTTAATTGCCGTGAAGATTGCACCGAGAGCACAAGCAAGTTGCGACATGATTTTCAGTACACCTGTAAAGAAACGAGGTCTACTAGAGGAGAGGAACAGAGAGATACGGATTCTCGTTGCCATGGCTATAGTTTGTGGTTCCATCATTGTATCTTAA

Coding sequence (CDS)

ACGTTGCTTGCCTTGATTGTCGTCTTCCTTGTTGTTCAGTCAGCAATGGCTGACACTGAAACTGAGAACAGGATCAATAACTTGTGTCATGAAATGGAGGAATTTGGGTTTTGCAGCCAAACCTTCCATGAGAACCTGAACGGCCCGACAGACGACATAGGACTAACCCAAATAGCAATTGTCGAAGCCCAAGCCAATGCAAGCAATACACTTAGGTATATTCAAGAGCTTCTTCCAACTATAACCGATCTTAAATTGAAGAACGACCTTATAATATGTGAAAATGCATACAAGACGGTGGATGAAGCACTTCAAGAAGGAATCGGCTTATTCTTCAAAAAGGATTATAGAGGCATGTTAATTGCCGTGAAGATTGCACCGAGAGCACAAGCAAGTTGCGACATGATTTTCAGTACACCTGTAAAGAAACGAGGTCTACTAGAGGAGAGGAACAGAGAGATACGGATTCTCGTTGCCATGGCTATAGTTTGTGGTTCCATCATTGTATCTTAA

Protein sequence

TLLALIVVFLVVQSAMADTETENRINNLCHEMEEFGFCSQTFHENLNGPTDDIGLTQIAIVEAQANASNTLRYIQELLPTITDLKLKNDLIICENAYKTVDEALQEGIGLFFKKDYRGMLIAVKIAPRAQASCDMIFSTPVKKRGLLEERNREIRILVAMAIVCGSIIVS
Homology
[Close]
BLAST of CmaCh05G010650 vs. TAIR 10
Match: AT1G09360.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-14
Identity = 55/168 (32.74%), Postives = 82/168 (48.81%), Query Frame = 0 

Query: 2   LLALIVVFLVVQSAMADTETENRINNLCHEMEEFGFCSQTFHENLNGPTDDI-GLTQIAI 61
           +L L +    ++   AD  TE  IN++C E E++GFC++  HE L  PT  I  LT + I
Sbjct: 3   VLVLYIFTPHIEGVEADGPTEALINSICIENEDYGFCNKIIHEKLKTPTATIKELTSLII 62

Query: 62  VEAQANASNTLRYIQELLPTITDLKLKNDLIICENAYKTVDEALQEGIGLFFKKDYRGML 121
               A+AS+T  +I  +L      K  + L  C   YK    +  E   LF K +Y  M 
Sbjct: 63  YTTMAHASDTYIFIDNILRKWPGPKETSGLKTCHAVYKRETNSFLEIRFLFSKGEYELMD 122

Query: 122 IAVKIAPRAQASCDMIFSTPVKKRGLLEERNREIRILVAMAIVCGSII 169
            A+    +    C   F  P  K  LLE++ R +RIL+ M+ V G ++
Sbjct: 123 EAILSTAKILEECRGDFLIPPYKEPLLEKK-RVMRILITMSAVSGHMV 169

[Close]
BLAST of CmaCh05G010650 vs. TAIR 10
Match: AT1G09370.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 47/172 (27.33%), Postives = 84/172 (48.84%), Query Frame = 0 

Query: 1   TLLALIVVFLVVQSAMADTETENRINNLCHEMEEFGFCSQTFHENLNG-PTDDIGLTQIA 60
           +++  I++   V  A  D +T+ R+N +C +  +  FCS    +NLN  P  +  +  + 
Sbjct: 6   SIVLAIILASSVAEAFLDEKTQQRVNGICKQTMDTRFCSSLLIKNLNTFPASNKEIMNVT 65

Query: 61  IVEAQANASNTLRYIQELLPTITDLKLKNDLIICENAYKTVDEALQEGIGLFFKKDYRGM 120
           + EA+  A+NT  +I  LL    D   + DL  C  AY  V+ A  + +  FFK+ Y   
Sbjct: 66  VSEAERFAANTYFFISTLLRNAGD--ERPDLQACAEAYAIVNSAFTKAV-TFFKQAYYSK 125

Query: 121 LIAV-KIAPRAQASCDMIFSTPVKKRGLLEERNREIRILVAMAIVCGSIIVS 171
           ++ + K    A   C   F+    +   L E+NR+ +IL++M  +   ++ S
Sbjct: 126 IVNIEKKVSMAVDICKTDFNVLGYQINPLIEKNRQTKILLSMEQIVSHMVSS 174

The following BLAST results are available for this feature:
BLAST of CmaCh05G010650 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh05G010650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09360.14.7e-1432.74Plant invertase/pectin methylesterase inhibitor superfamily protein [more]
AT1G09370.11.8e-1027.33Plant invertase/pectin methylesterase inhibitor superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 20..164
e-value: 7.5E-5
score: 32.1
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 2..163
e-value: 6.4E-21
score: 72.4
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 25..161
e-value: 2.1E-9
score: 37.9
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 20..165
e-value: 5.4E-16
score: 60.9
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 23..163
NoneNo IPR availablePANTHERPTHR36710PECTINESTERASE INHIBITOR-LIKEcoord: 2..168
NoneNo IPR availablePANTHERPTHR36710:SF1F14J9.2 PROTEINcoord: 2..168
IPR034086Pectinesterase inhibitor, plantCDDcd15797PMEIcoord: 21..163
e-value: 7.58885E-35
score: 117.523

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G010650.1CmaCh05G010650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
molecular_function GO:0046910 pectinesterase inhibitor activity
molecular_function GO:0004857 enzyme inhibitor activity