CmaCh05G010520 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G010520
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionMYB transcription factor
LocationCma_Chr05: 8380811 .. 8382076 (-)
RNA-Seq ExpressionCmaCh05G010520
SyntenyCmaCh05G010520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGGAGGCATTATGGGAAGACACTCTTGTTGTTTCAAGCAGAAGCTGAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTAACTATATCACCAAACATGGCCATGGCTGTTGGAGCACTGTCCCTAAACTTGCAGGTCATATTCCCATATCCTTTCTTTATCTCTTTTAGCTTCTCTCTCTTCTCTTTTCTCTCTCTCTCTCGATCGAAAAAGAGAGAGAATTGGATAAGTTTTGGTTCGGGAATTCGAACTTTTGATTTCAAAAGAATGTACATATGTCTTCACAGTTCTAGGTTGTGAGGAGAGAGAGAGAACTTTTTTCTTTTTCTAAGGACGAAATGGAAAAAGGTTAACTTTTACGAGAACCCTTTTGGATCCACAGGCTTGCAAAGGTGTGGAAAGAGCTGTCGATTAAGATGGATCAATTACCTTAGACCAAATTTGAAAAGAGGCCCGTTCTCACAACAGGAAGAAGACTTGATCGTTGAGCTCCATTCAATTCTAGGCAACAGGTTTGTTCTTCCATCTTCATTCTCGTTCTTAGTTTCGAACTCCGTTTAACCTATATTACCCACTCAGATGGTCACAAATTGCTGCTCAGCTACCAGGAAGAACAGATAACGAGATAAAAAATCTATGGAATTCGTGCATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCAAACACTCACAAGCCTTATCTAGACGAAGAAACCAACAATAATGGGAAGAACAACAGCCTTATCATCACATCAAATGATCAAAAAAGCCATGAAAAAGCTTCCCCAATTCAAAGTCCAGACATGTCCACCACTACTTTTGAGGCCTTTTCAAATTTATTCTCCCCAGCTCTCAATTCATGTGCTGTAGCTCCAAGTTCTACTTCTCAAGTTGTTCATAATAGCAACAACAATGGCTTCTTATGGCAGCCAGATGAGTTTCTTTCCGCTCCCTCCGAGCTCATGAGAAGTGATTGGCATCGCCACCCGACCCTCCAACCCGAACTCTTTTGGATCTAAACCTTCACACGTACCCATGAAAATGTTGTCGTCCTCATTCCTGAGATAAACTCGTTAATCAATCAGAGTTTGAAGATACTCGTACAGTCGACCTGAGCTATATCTGAAAGTGTGTAAAGCTCTCGTCGTTATCTATTATAATTATTTTTTTGAATTTGATAATATGTGAGACGGAGATTTGAAATTATAATATCATAACTATCTGAATTGTGTTCATGTTCGCAATGGATCGATA

mRNA sequence

GGAGGAGGCATTATGGGAAGACACTCTTGTTGTTTCAAGCAGAAGCTGAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTAACTATATCACCAAACATGGCCATGGCTGTTGGAGCACTGTCCCTAAACTTGCAGGCTTGCAAAGGTGTGGAAAGAGCTGTCGATTAAGATGGATCAATTACCTTAGACCAAATTTGAAAAGAGGCCCGTTCTCACAACAGGAAGAAGACTTGATCGTTGAGCTCCATTCAATTCTAGGCAACAGATGGTCACAAATTGCTGCTCAGCTACCAGGAAGAACAGATAACGAGATAAAAAATCTATGGAATTCGTGCATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCAAACACTCACAAGCCTTATCTAGACGAAGAAACCAACAATAATGGGAAGAACAACAGCCTTATCATCACATCAAATGATCAAAAAAGCCATGAAAAAGCTTCCCCAATTCAAAGTCCAGACATGTCCACCACTACTTTTGAGGCCTTTTCAAATTTATTCTCCCCAGCTCTCAATTCATGTGCTGTAGCTCCAAGTTCTACTTCTCAAGTTGTTCATAATAGCAACAACAATGGCTTCTTATGGCAGCCAGATGAGTTTCTTTCCGCTCCCTCCGAGCTCATGAGAAGTGATTGGCATCGCCACCCGACCCTCCAACCCGAACTCTTTTGGATCTAAACCTTCACACGTACCCATGAAAATGTTGTCGTCCTCATTCCTGAGATAAACTCGTTAATCAATCAGAGTTTGAAGATACTCGTACAGTCGACCTGAGCTATATCTGAAAGTGTGTAAAGCTCTCGTCGTTATCTATTATAATTATTTTTTTGAATTTGATAATATGTGAGACGGAGATTTGAAATTATAATATCATAACTATCTGAATTGTGTTCATGTTCGCAATGGATCGATA

Coding sequence (CDS)

ATGGGAAGACACTCTTGTTGTTTCAAGCAGAAGCTGAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTAACTATATCACCAAACATGGCCATGGCTGTTGGAGCACTGTCCCTAAACTTGCAGGCTTGCAAAGGTGTGGAAAGAGCTGTCGATTAAGATGGATCAATTACCTTAGACCAAATTTGAAAAGAGGCCCGTTCTCACAACAGGAAGAAGACTTGATCGTTGAGCTCCATTCAATTCTAGGCAACAGATGGTCACAAATTGCTGCTCAGCTACCAGGAAGAACAGATAACGAGATAAAAAATCTATGGAATTCGTGCATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCAAACACTCACAAGCCTTATCTAGACGAAGAAACCAACAATAATGGGAAGAACAACAGCCTTATCATCACATCAAATGATCAAAAAAGCCATGAAAAAGCTTCCCCAATTCAAAGTCCAGACATGTCCACCACTACTTTTGAGGCCTTTTCAAATTTATTCTCCCCAGCTCTCAATTCATGTGCTGTAGCTCCAAGTTCTACTTCTCAAGTTGTTCATAATAGCAACAACAATGGCTTCTTATGGCAGCCAGATGAGTTTCTTTCCGCTCCCTCCGAGCTCATGAGAAGTGATTGGCATCGCCACCCGACCCTCCAACCCGAACTCTTTTGGATCTAA

Protein sequence

MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYLRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDPNTHKPYLDEETNNNGKNNSLIITSNDQKSHEKASPIQSPDMSTTTFEAFSNLFSPALNSCAVAPSSTSQVVHNSNNNGFLWQPDEFLSAPSELMRSDWHRHPTLQPELFWI
Homology
BLAST of CmaCh05G010520 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-67
Identity = 131/228 (57.46%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCFKQKLRKGLWSPEEDEKLLNYIT+HGHGCWS+VPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FSQ EE LI+ELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNSLIITSNDQKS-------HEKASPIQS-------PDMST 180
           IDP THKP +  E  +    +  + +S   KS       H+++  + S       P  +T
Sbjct: 121 IDPTTHKPLITNELQSLNVIDQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWFPANTT 180

Query: 181 TTFEAFSNLFSPALNSCAVAPSSTSQVVHNSNNNGFLWQPDEFLSAPS 215
           TT +  +  FS + N+  V+    S +   S ++        F  AP+
Sbjct: 181 TTNQNSAFCFSSS-NTTTVSDQIVSLISSMSTSSSPTPMTSNFSPAPN 227

BLAST of CmaCh05G010520 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.3e-67
Identity = 122/172 (70.93%), Postives = 145/172 (84.30%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLL +IT HGHGCWS+VPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FS +EE+LIVELH++LGNRWSQIA++LPGRTDNEIKNLWNS IKKKLKQ+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNSLIITSNDQKSHEKASPIQSPDMSTTTFEAF 173
           IDPNTHKP  + E+ ++    +   TSN+++S    +  +SP  S+ T + F
Sbjct: 121 IDPNTHKPISEVESFSDKDKPT---TSNNKRS---GNDHKSPSSSSATNQDF 166

BLAST of CmaCh05G010520 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 219.2 bits (557), Expect = 5.1e-56
Identity = 102/136 (75.00%), Postives = 113/136 (83.09%), Query Frame = 0

Query: 1   MGRHS--CCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWI 60
           MGR S     + K+RKGLWSPEEDEKL N+I +HG GCWS+VP+LA L RCGKSCRLRWI
Sbjct: 1   MGRPSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWI 60

Query: 61  NYLRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQ 120
           NYLRP+LKRG FSQQEED IV LH ILGNRWSQIA+ LPGRTDNEIKN WNSCIKKKL+Q
Sbjct: 61  NYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120

Query: 121 KGIDPNTHKPYLDEET 135
           +GIDP THKP    +T
Sbjct: 121 QGIDPATHKPMASADT 136

BLAST of CmaCh05G010520 vs. ExPASy Swiss-Prot
Match: Q9SPG3 (Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-52
Identity = 93/125 (74.40%), Postives = 103/125 (82.40%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAG---------LQRCGK 60
           MG HSCC KQK+++GLWSPEEDEKL+NYI  +GHGCWS+VPK AG         LQRCGK
Sbjct: 1   MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYTHIHGFCLQRCGK 60

Query: 61  SCRLRWINYLRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSC 117
           SCRLRWINYLRP+LKRG FS QE  LI+ELHSILGNRW+QIA  LPGRTDNE+KN WNS 
Sbjct: 61  SCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSS 120

BLAST of CmaCh05G010520 vs. ExPASy Swiss-Prot
Match: O49608 (Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.7e-51
Identity = 87/142 (61.27%), Postives = 114/142 (80.28%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K    KG W+ EED+KL++YI  HG GCW ++P+ AGLQRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG F+ +E+DLI++LHS+LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +KG
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNS 143
           IDP TH+P  + +T+ +  ++S
Sbjct: 121 IDPATHRPINETKTSQDSSDSS 142

BLAST of CmaCh05G010520 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 )

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69
Identity = 119/149 (79.87%), Postives = 134/149 (89.93%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           M RHSCC+KQKLRKGLWSPEEDEKLLNYITKHGHGCWS+VPKLAGL+RCGKSCRLRWINY
Sbjct: 1   MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FS +E++LIVELH++LGNRWSQIAA+LPGRTDNEIKNLWNSCIKKKL +KG
Sbjct: 61  LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG 120

Query: 121 IDPNTHKPY--LDEETNNNGKNNSLIITS 148
           IDP THKP   + +ETN +  NNS   +S
Sbjct: 121 IDPITHKPLSEVGKETNRSDNNNSTSFSS 149

BLAST of CmaCh05G010520 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 )

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-68
Identity = 131/228 (57.46%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCFKQKLRKGLWSPEEDEKLLNYIT+HGHGCWS+VPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FSQ EE LI+ELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNSLIITSNDQKS-------HEKASPIQS-------PDMST 180
           IDP THKP +  E  +    +  + +S   KS       H+++  + S       P  +T
Sbjct: 121 IDPTTHKPLITNELQSLNVIDQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWFPANTT 180

Query: 181 TTFEAFSNLFSPALNSCAVAPSSTSQVVHNSNNNGFLWQPDEFLSAPS 215
           TT +  +  FS + N+  V+    S +   S ++        F  AP+
Sbjct: 181 TTNQNSAFCFSSS-NTTTVSDQIVSLISSMSTSSSPTPMTSNFSPAPN 227

BLAST of CmaCh05G010520 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 )

HSP 1 Score: 255.0 bits (650), Expect = 5.9e-68
Identity = 122/172 (70.93%), Postives = 145/172 (84.30%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLL +IT HGHGCWS+VPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FS +EE+LIVELH++LGNRWSQIA++LPGRTDNEIKNLWNS IKKKLKQ+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNSLIITSNDQKSHEKASPIQSPDMSTTTFEAF 173
           IDPNTHKP  + E+ ++    +   TSN+++S    +  +SP  S+ T + F
Sbjct: 121 IDPNTHKPISEVESFSDKDKPT---TSNNKRS---GNDHKSPSSSSATNQDF 166

BLAST of CmaCh05G010520 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 )

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-66
Identity = 121/174 (69.54%), Postives = 136/174 (78.16%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLL YITK+GHGCWS+VPK AGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FSQ EE+LI+ELH++LGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKL+ +G
Sbjct: 61  LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNSLIITSNDQKSHEKASPIQSPDMSTTTFEAFSN 175
           IDP THK   + ET  + K      T   +KS +          STTT     N
Sbjct: 121 IDPVTHKLLTEIETGTDDK------TKPVEKSQQTYLVETDGSSSTTTCSTNQN 168

BLAST of CmaCh05G010520 vs. TAIR 10
Match: AT4G01680.3 (myb domain protein 55 )

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-66
Identity = 121/174 (69.54%), Postives = 136/174 (78.16%), Query Frame = 0

Query: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLL YITK+GHGCWS+VPK AGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 60

Query: 61  LRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LRP+LKRG FSQ EE+LI+ELH++LGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKL+ +G
Sbjct: 61  LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG 120

Query: 121 IDPNTHKPYLDEETNNNGKNNSLIITSNDQKSHEKASPIQSPDMSTTTFEAFSN 175
           IDP THK   + ET  + K      T   +KS +          STTT     N
Sbjct: 121 IDPVTHKLLTEIETGTDDK------TKPVEKSQQTYLVETDGSSSTTTCSTNQN 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LPH61.7e-6757.46Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1[more]
Q8VZQ28.3e-6770.93Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1[more]
P200275.1e-5675.00Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3[more]
Q9SPG34.4e-5274.40Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1[more]
O496083.7e-5161.27Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT1G57560.11.1e-6979.87myb domain protein 50 [more]
AT5G26660.11.2e-6857.46myb domain protein 86 [more]
AT1G09540.15.9e-6870.93myb domain protein 61 [more]
AT4G01680.11.1e-6669.54myb domain protein 55 [more]
AT4G01680.31.1e-6669.54myb domain protein 55 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..63
e-value: 2.8E-13
score: 60.1
coord: 66..114
e-value: 1.1E-12
score: 58.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 9..61
score: 11.253823
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 62..112
score: 10.139033
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 69..109
e-value: 6.55139E-9
score: 48.3406
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 17..61
e-value: 1.41093E-11
score: 55.6594
NoneNo IPR availableGENE3D1.10.10.60coord: 11..67
e-value: 2.3E-20
score: 74.3
NoneNo IPR availableGENE3D1.10.10.60coord: 68..158
e-value: 5.8E-21
score: 76.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..163
NoneNo IPR availablePANTHERPTHR47997MYB DOMAIN PROTEIN 55coord: 1..168
NoneNo IPR availablePANTHERPTHR47997:SF41HOMEODOMAIN-RELATEDcoord: 1..168
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..61
e-value: 1.5E-15
score: 57.1
coord: 67..110
e-value: 2.2E-12
score: 47.0
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 66..116
score: 21.886164
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..65
score: 25.101683
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 12..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G010520.1CmaCh05G010520.1mRNA