CmaCh05G010210 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G010210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP-dependent DNA helicase
Location	Cma_Chr05: 8194917 .. 8198712 (+)
RNA-Seq Expression	CmaCh05G010210
Synteny	CmaCh05G010210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATCGAAGATCGTTGTTCTAGGGTTTTGTTCTTGTATTAATTTTGAGGCCCTGTTTGGATTTTGTCGCCGTTCATTTCAATTTTCTCTATCTGAAAAGGGGGCGGATCAAGAGGAAGAATTTGATGGTCCAGTTGATGAAATCAGGGAATCTCTCTCTGGAGCCGGATATGGCGTCGCTTCGGGACAAGGCGCCGGTGAAGCTGGAGATCGAGGACTCTCTTGAAGAGGAGCATGCTCCGTTCTCCAAGCGATCGAAAACGGCAACGACGTTTTCTCCGGTACGTGGAATCGGTTTTTCTTTTGCTTCGTTGCGAAGAAATGACGGGGAAGGGATTTTTTTTTTTTTTAGTCCTTGGAACTATTTTGAGAAGATGAATGTTATGCTTTTCAACTTCGAATTTGACTATTTAATTACCTGATTTTATTTCTCTTCCATTTTTCTTAATGGAGATTGATCTTCTTCCGTATGCTTATTTGGTATTCATAGTTGTGTGATATATGAGAATCCGAGTGTAATTTTCTGCTTATTCTCTGTGTTTTTTTCCCCCGAGGAGCGAGATGAAATGGTATTGTGATTTTCTCATCAGTTGAAATGATTTTGGCCTTTTTGTTGGTTGTTTTTGCATGATCTTATCAAACGAGAAGCATGGAAGTAGTTGTTCCGATGATTTTCCCGTAGTGCCTTCACAATACAATCCGCTTGATGAGCCTAGTCTTCTTGGTTTGCGGTTGAGGAAGAGCCCTTCCCTGTTGGATCTAATTCAAATGAAGCTTTCTCAGTCGACTGCTGCTTCGAGCCATGTGACCGAATGTGAAAGCTTCAACTCTTCCATAAAAAAGGATAATATAGGCACTGCCATTCCGGGCTCTATCGACAAGCTTAAAGCGTCGAACTTTACTGCATCGCTCCTAAGAATTGGTGGTTGGGAGGTAAAATCGATTGACCTCCCCTGTGCTTCTAATAACTGGAAAATGTTGTGGATGTGAAGTAATTAAGGTCTTATTCAATGACAGTATCAATCAAGATATGAAGGTGATTTGGTGGCAAAATGTTATTTTGCTAAGCATAAGCTTGTCTGGGAAATTCTTGAAGGTGGGTTGAAGAGTAAAATAGAAATCCAGTGGTCTGACATTATGGCCTTAAAGGCCAACTGCCCTGATAATGGACCTGGTAGTCTGAACGTGGTGGTACGCTTCGTATTCTTGCCTAATGCCTGATTTGTGCGTTTTCTCAATTCCTTAATGCATGAGCCATGAGAGTGTGTGTGTATGTATGTGAACTTCTTGTATTTTGACGGCTTATTTTTGTTGTTGTTTCTGTAGTTGTCTAGGCAGCCCCTTTTCTTCCGGGAGACGAACCCTCAACCAAGAAAACACACATTATGGCAGGCAACTGCTGACTTTACCGATGGCCAGGCTACTTTACACAGGTAATGCTTGCGACTTTACCATCTGTGAAGAGTATCAAATTATATGCTCTATCAATTTCCTTTTTGTGCTTTACATAGAAATTTTGCTCCCAAACAAAGTCAGCAGTAGAAGGTTTTCTATATTTACAACTATAGATGTTCTTCTTTTCTTTTGTTCTTAAGTTTTTGAGTAAAGGTGGTTCTGTTTTGATTATATCATTTCTGAGAAGCCCGATGGGTGAATTAGATTATAGCATCATTTCATTATCCTTTCTTCTCTATACGTTTGAATCGAAGTTCATGTCTTGGGTGTATGAGCCCTTTCTCTGACCATGGAACTTTCTTTTTGCTGGCAAGTTTCCATCTCTTGAGAAGAAATGAAATGTAGATCCAGTGAAGAATATGCGGATTCTAGAGACAACCTTCTAGATGAAATGGTTTCTATGAGGATTTTTTTTTTTTGTTGGACGAGAAAATTATAATATTCCTTGCATGTTCTTGAACATAGTAGATGCATAAACATTCCTGAACACAATACTTGGATAGCTACAAAGTATTCATGATAAGAACTTGTACCAAATATTTTTTTAATTTTTTTTATAAACGAAAATTGTTTATTTTCCTCATGCTGCGTAAGGTCAACTCTTCGTGTCTCACTCTTTGGACTTAGGTAATGATTATAGTGGTCATCTAACTTTGTGATTGTTAGGCAACATTTTCTGCAGTGTCCTCAAGGATTGTTGAACAAACATTTTGAAAAGCTAATCCAGTGTGACATGCGCCTTAACTTCTTAAGCCGACAGCCAGAGATAGTTTTGGATTCACCATATTTCGAACGAAGGGTTTCTGTTTTTGAGGATCCAGAACACCCAGCAGAAAATATTAAAAGATCAATTACGACAGACGATGCCTTGCCATCTCCTCAGCAATCATCCTTGAAAATAGAACAACAAGACTCTACTTGTTCAGCAGTAGAACATCGTTCTCAAGAAGCTCCATCACCTTGTTCAGGTGACAATTTATGAATCTTCTTTTGTTATTCATTCTATTTAATTGAAGGGACAAAAAGAAGCATGTCTTTTAGACTTTAGTTTTAGTTCATGAATTCTTGGTGCAAAATCGTGCGAAATGTCCTGTGAGTCCAAAATAAATCACATGGTGTGATCATCATGAGTTGAACGATCAATATTCCTTGTCATTGATGTGATCTGTAATTTGTTTCTGGAATTTACAGTCGTACCTTTTTCTAGGCTTTTATCAGAAATTAGTCAAACGTTTGCTTGTATCCAAAATATCTTGTGCTGTTCCTTCGTTATTGATAAAAGATGGAATCTTGTGCAGCCGAGGCAAGTGCAAATTTTGAAGTTGGTAGCTCTAGAAGCCCAAAAAATTGGGAGCAAACGAAAGTTCCTGGGCTCCACCCGTCCATGTCGATGAGCGATCTCGTGAATCACATTGGACAGTGTATTACAGAGCAGATGACTGGGGCGAATCCATCATTTACCAATCAAGGACTGGAATACCAAGACATACTAGAAGATATTGCACAGTCTCTGCTGAACGACAACCAATCTACAACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAATTCACTGTTCAATGAAGAAAGTTGTGGCGAAGGACCCGATGATAGGAAGAGCAATAAAGTCGGTAATGTATTGAGGGGCAATGTCGAAGCTGCTTTTACCGACGACGTAAAAGATAACTCAGATACTAAGCAGACAATCGGTATGTCTAGGAAGGATTCGTTCAGCGAATTGATGTTGCATCTTCCTCGAATCACTTCTATCCCGAATTTTTTGTTCAACATCTCAGAAGACAGTGAAAGGTGAGTCTGGCTGTGAAATGTTTCTGTACATTGTTTCGGAAATTGGCTACGGGTAGACGAGAAAATCCTCATGGGATTCTGAAATATGTATTGATGAAGAATCCTGTATGTATGTGTTGTAATTCATGTATTTAGGCATTTTATGTAATGTCTGCAGCACAGATGTTTTAATTCTTTCCCCTGTAATGTTATGTTATGAGAGAGCCGCCCACCTTACATAAGCTGTAAATGGAAATTACCCCTTTGGTGAATCACTCTATTCTAGAGTTTTATATACAATTTGAAACAAATTTAGCCACACATTTTTCCTTCCTATGCTTCCCCAAAATGTTCCTTAATTTCTTGCCTTTTATAAGTAAGAGAGAACACCATATATTATTATTATTATTATTATTATTTATCTTTAAAATTCGGAACCTTATTCTTAGATTGGATCTAATTTTGACAAATTGCTTACTATTAGGTTGGGATCGGATTGCTGA

mRNA sequence

TGATCGAAGATCGTTGTTCTAGGGTTTTGTTCTTGTATTAATTTTGAGGCCCTGTTTGGATTTTGTCGCCGTTCATTTCAATTTTCTCTATCTGAAAAGGGGGCGGATCAAGAGGAAGAATTTGATGGTCCAGTTGATGAAATCAGGGAATCTCTCTCTGGAGCCGGATATGGCGTCGCTTCGGGACAAGGCGCCGGTGAAGCTGGAGATCGAGGACTCTCTTGAAGAGGAGCATGCTCCGTTCTCCAAGCGATCGAAAACGGCAACGACGTTTTCTCCGCATGGAAGTAGTTGTTCCGATGATTTTCCCGTAGTGCCTTCACAATACAATCCGCTTGATGAGCCTAGTCTTCTTGGTTTGCGGTTGAGGAAGAGCCCTTCCCTGTTGGATCTAATTCAAATGAAGCTTTCTCAGTCGACTGCTGCTTCGAGCCATGTGACCGAATGTGAAAGCTTCAACTCTTCCATAAAAAAGGATAATATAGGCACTGCCATTCCGGGCTCTATCGACAAGCTTAAAGCGTCGAACTTTACTGCATCGCTCCTAAGAATTGGTGGTTGGGAGTATCAATCAAGATATGAAGGTGATTTGGTGGCAAAATGTTATTTTGCTAAGCATAAGCTTGTCTGGGAAATTCTTGAAGGTGGGTTGAAGAGTAAAATAGAAATCCAGTGGTCTGACATTATGGCCTTAAAGGCCAACTGCCCTGATAATGGACCTGGTAGTCTGAACGTGGTGTTGTCTAGGCAGCCCCTTTTCTTCCGGGAGACGAACCCTCAACCAAGAAAACACACATTATGGCAGGCAACTGCTGACTTTACCGATGGCCAGGCTACTTTACACAGGCAACATTTTCTGCAGTGTCCTCAAGGATTGTTGAACAAACATTTTGAAAAGCTAATCCAGTGTGACATGCGCCTTAACTTCTTAAGCCGACAGCCAGAGATAGTTTTGGATTCACCATATTTCGAACGAAGGGTTTCTGTTTTTGAGGATCCAGAACACCCAGCAGAAAATATTAAAAGATCAATTACGACAGACGATGCCTTGCCATCTCCTCAGCAATCATCCTTGAAAATAGAACAACAAGACTCTACTTGTTCAGCAGTAGAACATCGTTCTCAAGAAGCTCCATCACCTTGTTCAGCCGAGGCAAGTGCAAATTTTGAAGTTGGTAGCTCTAGAAGCCCAAAAAATTGGGAGCAAACGAAAGTTCCTGGGCTCCACCCGTCCATGTCGATGAGCGATCTCGTGAATCACATTGGACAGTGTATTACAGAGCAGATGACTGGGGCGAATCCATCATTTACCAATCAAGGACTGGAATACCAAGACATACTAGAAGATATTGCACAGTCTCTGCTGAACGACAACCAATCTACAACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAATTCACTGTTCAATGAAGAAAGTTGTGGCGAAGGACCCGATGATAGGAAGAGCAATAAAGTCGGTAATGTATTGAGGGGCAATGTCGAAGCTGCTTTTACCGACGACGTAAAAGATAACTCAGATACTAAGCAGACAATCGGTATGTCTAGGAAGGATTCGTTCAGCGAATTGATGTTGCATCTTCCTCGAATCACTTCTATCCCGAATTTTTTGTTCAACATCTCAGAAGACAGTGAAAGGTTGGGATCGGATTGCTGA

Coding sequence (CDS)

ATGGTCCAGTTGATGAAATCAGGGAATCTCTCTCTGGAGCCGGATATGGCGTCGCTTCGGGACAAGGCGCCGGTGAAGCTGGAGATCGAGGACTCTCTTGAAGAGGAGCATGCTCCGTTCTCCAAGCGATCGAAAACGGCAACGACGTTTTCTCCGCATGGAAGTAGTTGTTCCGATGATTTTCCCGTAGTGCCTTCACAATACAATCCGCTTGATGAGCCTAGTCTTCTTGGTTTGCGGTTGAGGAAGAGCCCTTCCCTGTTGGATCTAATTCAAATGAAGCTTTCTCAGTCGACTGCTGCTTCGAGCCATGTGACCGAATGTGAAAGCTTCAACTCTTCCATAAAAAAGGATAATATAGGCACTGCCATTCCGGGCTCTATCGACAAGCTTAAAGCGTCGAACTTTACTGCATCGCTCCTAAGAATTGGTGGTTGGGAGTATCAATCAAGATATGAAGGTGATTTGGTGGCAAAATGTTATTTTGCTAAGCATAAGCTTGTCTGGGAAATTCTTGAAGGTGGGTTGAAGAGTAAAATAGAAATCCAGTGGTCTGACATTATGGCCTTAAAGGCCAACTGCCCTGATAATGGACCTGGTAGTCTGAACGTGGTGTTGTCTAGGCAGCCCCTTTTCTTCCGGGAGACGAACCCTCAACCAAGAAAACACACATTATGGCAGGCAACTGCTGACTTTACCGATGGCCAGGCTACTTTACACAGGCAACATTTTCTGCAGTGTCCTCAAGGATTGTTGAACAAACATTTTGAAAAGCTAATCCAGTGTGACATGCGCCTTAACTTCTTAAGCCGACAGCCAGAGATAGTTTTGGATTCACCATATTTCGAACGAAGGGTTTCTGTTTTTGAGGATCCAGAACACCCAGCAGAAAATATTAAAAGATCAATTACGACAGACGATGCCTTGCCATCTCCTCAGCAATCATCCTTGAAAATAGAACAACAAGACTCTACTTGTTCAGCAGTAGAACATCGTTCTCAAGAAGCTCCATCACCTTGTTCAGCCGAGGCAAGTGCAAATTTTGAAGTTGGTAGCTCTAGAAGCCCAAAAAATTGGGAGCAAACGAAAGTTCCTGGGCTCCACCCGTCCATGTCGATGAGCGATCTCGTGAATCACATTGGACAGTGTATTACAGAGCAGATGACTGGGGCGAATCCATCATTTACCAATCAAGGACTGGAATACCAAGACATACTAGAAGATATTGCACAGTCTCTGCTGAACGACAACCAATCTACAACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAATTCACTGTTCAATGAAGAAAGTTGTGGCGAAGGACCCGATGATAGGAAGAGCAATAAAGTCGGTAATGTATTGAGGGGCAATGTCGAAGCTGCTTTTACCGACGACGTAAAAGATAACTCAGATACTAAGCAGACAATCGGTATGTCTAGGAAGGATTCGTTCAGCGAATTGATGTTGCATCTTCCTCGAATCACTTCTATCCCGAATTTTTTGTTCAACATCTCAGAAGACAGTGAAAGGTTGGGATCGGATTGCTGA

Protein sequence

MVQLMKSGNLSLEPDMASLRDKAPVKLEIEDSLEEEHAPFSKRSKTATTFSPHGSSCSDDFPVVPSQYNPLDEPSLLGLRLRKSPSLLDLIQMKLSQSTAASSHVTECESFNSSIKKDNIGTAIPGSIDKLKASNFTASLLRIGGWEYQSRYEGDLVAKCYFAKHKLVWEILEGGLKSKIEIQWSDIMALKANCPDNGPGSLNVVLSRQPLFFRETNPQPRKHTLWQATADFTDGQATLHRQHFLQCPQGLLNKHFEKLIQCDMRLNFLSRQPEIVLDSPYFERRVSVFEDPEHPAENIKRSITTDDALPSPQQSSLKIEQQDSTCSAVEHRSQEAPSPCSAEASANFEVGSSRSPKNWEQTKVPGLHPSMSMSDLVNHIGQCITEQMTGANPSFTNQGLEYQDILEDIAQSLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNEESCGEGPDDRKSNKVGNVLRGNVEAAFTDDVKDNSDTKQTIGMSRKDSFSELMLHLPRITSIPNFLFNISEDSERLGSDC

Homology

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BLAST of CmaCh05G010210 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 462.2 bits (1188), Expect = 5.6e-130
Identity = 293/601 (48.75%), Postives = 371/601 (61.73%), Query Frame = 0


Query: 1   MVQLMKSGNLSLEPDMAS-LRDKAPVKLEI-EDSLEEEHAPFSKRSKTATTFSPHGSSCS 60
           MV++ KSG L  E + A+  RD+ PVKLEI ED LEEEH P +KRS+    +SP  SS +
Sbjct: 1   MVEMRKSGGLRPESESAARCRDELPVKLEIAEDDLEEEHGPLNKRSR---LWSPGTSSST 60

Query: 61  DDFPVVPSQYNPLDEPSLLGLRLRKSPSLLDLIQMKLSQ-STAASSHVTECESFNSSIKK 120
               + P++YNPLDEPS LGL L+KSPSLL+LIQMK++      ++   +  +  S +K+
Sbjct: 61  ----MAPAKYNPLDEPSPLGLSLKKSPSLLELIQMKITHCGDPKAAETLKAGALGSGLKR 120

Query: 121 D--------NIG-TAIPGSIDKLKASNFTASLLRIGGWEYQSRYEGDLVAKCYFAKHKLV 180
           +        ++G T  PGSI+KLKASNF ASLL+IG WEY+SRYEGDLVAKCYFAKHKLV
Sbjct: 121 ESKTIAAAASVGPTLAPGSIEKLKASNFPASLLKIGQWEYKSRYEGDLVAKCYFAKHKLV 180

Query: 181 WEILEGGLKSKIEIQWSDIMALKANCPDNGPGSLNVVLSRQPLFFRETNPQPRKHTLWQA 240
           WE+LE GLKSKIEIQWSDIMALKANCP++GPG+L +VL+RQPLFFRETNPQPRKHTLWQA
Sbjct: 181 WEVLEQGLKSKIEIQWSDIMALKANCPEDGPGTLTLVLARQPLFFRETNPQPRKHTLWQA 240

Query: 241 TADFTDGQATLHRQHFLQCPQGLLNKHFEKLIQCDMRLNFLSRQPEIVLDSPYFERRVSV 300
           T+DFTDGQA+++RQHFLQC QG++NKHFEKL+QCD RL  LSRQPEI +DSPYF+ R S+
Sbjct: 241 TSDFTDGQASMNRQHFLQCAQGIMNKHFEKLVQCDHRLFHLSRQPEIAIDSPYFDARQSI 300

Query: 301 FEDPE----HPAENIKRSITTDDALPSPQQSSLKIEQQDSTCSAVEHRSQEAPSPCSA-E 360
           FEDP     HP  N+  +++T  ++   Q  +  +  Q S  S   + S EAPSP S  +
Sbjct: 301 FEDPSESKGHPFGNL--NLSTGPSISGTQNLASPVGAQSS--SEHMYLSHEAPSPSSVID 360

Query: 361 ASANFEVG-----SSRSPKNWEQTKVPGLHPSMSMSDLVNHIGQCITEQMTGANPSFTNQ 420
           A AN  +G     +SR+  +  Q + PG+H SMS+SD +  +  C T+  T  N +    
Sbjct: 361 ARANEGIGGSEAVNSRNRTDCGQIEAPGIHQSMSLSDFLAVL--CDTKNTTDLNLADDVD 420

Query: 421 GL----------------------------------------------------EYQDIL 480
           GL                                                    E+ +  
Sbjct: 421 GLHQSMSVSDFVAYLSDSRNITDSDQIKVPGLHQSMSVSDFVGLLSDSAGGSHPEHMEKF 480

Query: 481 EDIAQSLLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNEESCGEGPDDRK 527
           E + Q LL+DN Q    DEKSLM RVNSL  LL KDP N    + L  E S G      K
Sbjct: 481 EIMKQQLLSDNIQFEAPDEKSLMPRVNSLFNLLYKDP-NVAANSQLNTEMSVG-----LK 540

[Close]

BLAST of CmaCh05G010210 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 429.5 bits (1103), Expect = 4.0e-120
Identity = 268/534 (50.19%), Postives = 344/534 (64.42%), Query Frame = 0


Query: 1   MVQLMKSGNLSLEPDMASLRDKAPVKLE-IEDSLEEEHAPFSKRSKTATTFSPHGSSCSD 60
           MV++M+S N  L        +  PVKLE IEDSLEEEHAP +KRSK  +    +G+S   
Sbjct: 1   MVEMMRSEN-HLRQASKHRNNNFPVKLEIIEDSLEEEHAPLNKRSKLWS----NGTSV-- 60

Query: 61  DFPVVPSQYNPLDEPSLLGLRLRKSPSLLDLIQMKLSQSTAASSHVTECESFNSSIKKDN 120
                 S+++ L+EPS LGL L+KSPS  +LI+MKLSQS   S          +S+KK++
Sbjct: 61  ------SKFSLLEEPSPLGLSLKKSPSFQELIEMKLSQSGDDS----------NSVKKES 120

Query: 121 IGTAIPGSIDKLKASNFTASLLRIGGWEYQSRYEGDLVAKCYFAKHKLVWEILEGGLKSK 180
            G    G+++KLKASNF A++LRIG WEY+SRYEGDLVAKCYFAKHKLVWE+LE GLKSK
Sbjct: 121 FGFGGVGTVEKLKASNFPATILRIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQGLKSK 180

Query: 181 IEIQWSDIMALKANCPDNGPGSLNVVLSRQPLFFRETNPQPRKHTLWQATADFTDGQATL 240
           IEIQWSDIMALKAN P++ PG+L +VL+R+PLFFRETNPQPRKHTLWQAT+DFTDGQA++
Sbjct: 181 IEIQWSDIMALKANLPEDEPGTLTIVLARRPLFFRETNPQPRKHTLWQATSDFTDGQASM 240

Query: 241 HRQHFLQCPQGLLNKHFEKLIQCDMRLNFLSRQPEIVLDSPYFERRVSVFEDPEHPAENI 300
           +RQHFLQCP G++NKHFEKL+QCD RL  LSRQPEI L +P+F+ R+S+FEDP       
Sbjct: 241 NRQHFLQCPPGIMNKHFEKLVQCDHRLFCLSRQPEINLAAPFFDSRLSIFEDP------- 300

Query: 301 KRSITTDDALPSPQQSSLKIEQQDSTCSAVEH--RSQEAPSPCSA-EASANFEVG---SS 360
             S++    + SP  +           S+ EH   S +A SP S  +A A   VG    S
Sbjct: 301 --SVSGSHNIASPVGAQ----------SSSEHVSLSHDALSPSSVMDARAIEGVGGSIDS 360

Query: 361 RSPKNWEQTKVPGLHPSMSMSDLVNHIGQCITEQMTGANPSFTNQGLEYQDILEDIAQSL 420
           R+   W Q K+PGLH S+SM+D +  +               ++Q  E     E++ Q L
Sbjct: 361 RNTNGWSQIKMPGLHQSISMNDFLTFL---------------SDQACENNQEFEEMKQLL 420

Query: 421 LNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNEESCGEGPDDRKSNKVGNV 480
           L+DN Q+  SDEKS+M +VNS C LLQ      +  NS  N E+     D  +   V N 
Sbjct: 421 LSDNTQTDPSDEKSVMSKVNSFCNLLQ------SAANSQLNIETA----DTERVVGVDN- 465

Query: 481 LRGNVEAAFTDDVKDNSDTKQTIGMSRKDSFSELMLHLPRITSIPNFLFNISED 527
              ++       V   S +K   GMSRKDSFS+L++HLPRITS+P FLFNISE+
Sbjct: 481 -NRHMPEGGKRVVDPASSSKPLQGMSRKDSFSDLLVHLPRITSLPKFLFNISEE 465

[Close]

BLAST of CmaCh05G010210 vs. TAIR 10
Match: AT3G05770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54300.1); Has 105 Blast hits to 105 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-30
Identity = 87/222 (39.19%), Postives = 121/222 (54.50%), Query Frame = 0


Query: 71  LDEPSLLGLRLRKSPSLLDLIQMKLSQSTAASSHVTECESFNSSIKKDNIGTAIPGSIDK 130
           +DE   L L L K+P L++ I+  L          TE  S  S+         +P S +K
Sbjct: 20  VDEGPRLNLPLTKTPELINKIESYLKVHYTCPHQQTENSSKTST---------LPKSPEK 79

Query: 131 LKASNFTASLLRIGGWEYQSRYEGDLVAKCYFAKHKLVWEILEG-------GLKSKIEIQ 190
           LKA NF  S ++IG   + ++   D+VAK YFAK KL+WE L G        LKSKIEIQ
Sbjct: 80  LKAMNFPISTIKIGDCVFVAKNPDDIVAKFYFAKKKLLWEFLFGEPVANMPRLKSKIEIQ 139

Query: 191 WSDIMALKANCPD-NGPGSLNVVLSRQPLFFRETNPQPRKHTLW-QATADFTDGQATLHR 250
           W+D+ + + +    +  G L + L ++P FF ETNPQ  KHT W Q   DFT  QA+ +R
Sbjct: 140 WNDVSSFEESINSRDETGILKIELKKRPTFFTETNPQAGKHTQWKQLDYDFTGDQASYYR 199

Query: 251 QHFLQCPQGLLNKHFEKLIQCDMRLNFLSRQPEIVLDSPYFE 284
           +H L  P G+L K+ EKL+  D   + L + P  V +S YF+
Sbjct: 200 RHTLHFPPGVLQKNLEKLL-TDSFWSKLYKVPFPVHESLYFD 231

[Close]

BLAST of CmaCh05G010210 vs. TAIR 10
Match: AT1G54300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05770.1); Has 107 Blast hits to 107 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 2.6e-26
Identity = 68/158 (43.04%), Postives = 91/158 (57.59%), Query Frame = 0


Query: 135 NFTASLLRIGGWEYQSRYEGDLVAKCYFAKHKLVWEILEG-------GLKSKIEIQWSDI 194
           NF  S +RIGGW   ++   D+VAK YFAK KL+WE L G        LK KIEIQW+D+
Sbjct: 2   NFPISTIRIGGWVVVAKNPDDIVAKFYFAKKKLIWEFLFGEPETNTLRLKRKIEIQWNDV 61

Query: 195 MALKANCPD-NGPGSLNVVLSRQPLFFRETNPQPRKHTLW-QATADFTDGQATLHRQHFL 254
            + + +    +  G L + L ++P FF ETNPQ  KHT W Q   DFT   A+ +R+H L
Sbjct: 62  SSFEESISSRDETGILKIELKKRPTFFIETNPQAGKHTQWKQLDHDFTGDHASNYRRHTL 121

Query: 255 QCPQGLLNKHFEKLIQCDMRLNFLSRQPEIVLDSPYFE 284
             P G+L K+ EKL+  D   + L   P  V +S YF+
Sbjct: 122 HFPPGVLQKNLEKLV-TDSFWSKLYEVPFPVHESRYFD 158

The following BLAST results are available for this feature:

BLAST of CmaCh05G010210 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh05G010210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30780.1	5.6e-130	48.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24100.1	4.0e-120	50.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G05770.1	1.7e-30	39.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G54300.1	2.6e-26	43.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..321
None	No IPR available	PANTHER	PTHR33494	OS02G0793800 PROTEIN	coord: 1..528
None	No IPR available	PANTHER	PTHR33494:SF19	ATP-DEPENDENT DNA HELICASE	coord: 1..528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G010210.1	CmaCh05G010210.1	mRNA