Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTCTTCCATCATCGCCAAACTCTTCATTTATGCATGGAGTCTTCACTGCCGTTCGATGCCCCACGATGATTAGAAATTCCGCAGTCATTATCAACTCAGGTCAGCTTCTCATCGTCCATGGATTCAGGCTTAGATTCACATTTTCACTCACATTTAAGTTCTTCACATCAACTGCTTCTCTTCCTCAAAATCTTCCTGTAGAACATGATATATCCGCGCAGCTCTTCTCCATTCTCTCTCGCCCCAATTGGCAGAAGCATCCTTCTCTGAAAGTCTTAATCCCATCTATTTCTCCGTCTCATATCTCTGCCCTTTTCGCCCTTAATCTCGATCCCCAAACTGCTCTTGCGTTTTTCAATTGGATCGGGCAGAAGCATGGATTCAAACACAACGTTCAATCCTATGTTTCTATTATAAATATCCTTGTTCCCAATGGCTACCTCCACATTGCTGAAAAGATGCGGATTTTGATGATTAAGTCGACGGATTCCTTAGAGAATGCTCTGTTCGTGTTGGAAATGCTGCGGAGCATGAACCGCCGGGGGGATGATTTCAAATTTAAGCTCACTCTTAGGTGCTATAACATGCTCTTGATGTTGTTGTCGAGGTTTCTCATGATTGATGAAATGAAAAGTGTGTATTTAGAGATGTTGGATGACATGGTTACCCCAAATATATATACCTTCAACACAATGGTAAATGGATATTGTAAATTGGGTTATGTAGTTGAAGCAGAGTTGTATGTCAGTAAGATAGTGCAAGCCGGTTTGAGTTTGGATACATTTACTTATACGTCTTTGATATTAGGATATTGTAGGAATAAGAATGTAGATGGTGCGTATAGAATTTTTCTATCGATGCCGAGCAAAGGTTGCCGCAGGAATGAGGTTTCTTATACTAATATGATTAATGGATTTTGTGAAGCCAGGAGGATTGATGAAGCTCTTAAATTGTTTTCACAAATGCACGAGGATAATTGTTCGCCAACTGTTCGTACCTATACGATTCTCATACATGCAATGTGTCAATTGGGCAGGAAAACAGAAGCATTTAGTATGTTCGAGGAGATGACTGAGAAGGGTTCTGAGCCAAATGTATATACCTGGACGGTCCTCATTCATAGTTTATGTGAAGACAACAATTTTGATGATGCCAAGAAAATGCTAAATGGAATGCTAGAGAAAGGATTGGTTCCAAGTTTGGTCACGTACAATGCCTTAATTGATGGTTATTGTAAGAAAGGAATGAGTATGAGTGCCTTGGAAATTTTGAGCTTGATGGAATCGAATAATTGTAGTCCAAATGCTCGCACTTATAATGAATTGATATTGGGGTTTTGCAGGGCTAAGAATGTCCACAAGGCCATGTCACTACTTAATGAAATGCTCGAGCGGAAGCTTCAACCAGATGTAGTTACCTACAACCTATTAATCCATGGACAGTGCAAAGAAGGGCATCTGGATAGTGCTTATAAGTTGCTTAGTTTGATGAATGAAAGTGGTTTGGTTCCTGATGAGTGGACGTACAGTGTCTTTGTAGATACTCTCTGTAAAAGAGAGCAGGTTGAAGAAGCTCGTCTTCTCTTTGACTCTCTAAAGGTGAAAGGCATAAAGGCAAATGAAGTAATATACAGTGCTTTGATTGATGGCTATTGCAAGGTGGGAAAAGTCAGTGATGGTCATTCATTGCTTGATAAAATGCTTAGTGATGGATGGGTTCCAAATTCATTTACTTATAATTCCTTGATTGATGGATATTGCAAAGAGAAAAATTATCAAGAAGCTCTTTTACTTATGGAAATAATGATGAAGAGGGGCATTAAGCCTGCTGTTGATACTTACACCATTCTTATAGAAAATTTATTAAAAGATGGTGAGTTTGACCGTGCTCATAATATGTTTGATCAAATGCTTTCCACGGGTTCTCATCCTGATGTATTTATATATACTGCATTTATTCATGCATATTGTAGCCAGGGTAGACTAAAAGATGCAGAGGTTTTAATTTATAAAATGAATGAAAAAGGAATATTGCCAGACACTCTTCTTTATACATTATTGATTGATGCATATGGACGGTTTGGATCAATTGATGATGCTTTTGACATTCTGAAGCATATGCATGATGTTGGTTGTGAGCCATCTTTCTACACTTATTCTTATTTAATTAAACATCTCTCGAACGAAAAACTGAAAGAAGTAAATAGTAATTCGGAGTTGAGTGATTTGTCATCAGGGGTTGCCTCCAATGATTTTTCCAACTTTTGGAGGAGAGTAGATTATGAATTCGCTTTGGAGTTGTTTGGGAAGATGGTCAAGCATGGCTGTGCACCTAATGCTAATACTTATAGCAAGTTTATTACAGGTCTTTGCAAGGTTGAATGCTTGGAAATTGCCCAGAGGTTGTTTGATCATATGAAAGAAAAAGGACTATCGCCTAATGAAGACATTTACAACTCTCTTCTTCGTTGTTCTTGCCGATCAGGATTGTATGGGAATGCAGTGAGATGGTTAGATATCATGATAGAGCAAGGACATTTACCACATTTAGATTCTTGCAAGCTGCTGCTTTGTGGATTGTATGACGAAGGAAATAATGAGAAAGCAAAAACAGTGTTTTATAGTTTACTTCAGTGTGGGTATAATTATGATGAAATGACTTGGAAAGTACTTATTGATGGCTTACTTAAGAAGGGCCTTGTTGATAAATGCTCTGAATTATTTGGCATCATGGAGAAACAAGGTTGCCAAATTCATCCTAAGACATATAGTATGTTGATTGAGGCATTTGATGGTATTCAGGATATCGATTAA
mRNA sequence
ATGAATCTTCTTCCATCATCGCCAAACTCTTCATTTATGCATGGAGTCTTCACTGCCGTTCGATGCCCCACGATGATTAGAAATTCCGCAGTCATTATCAACTCAGGTCAGCTTCTCATCGTCCATGGATTCAGGCTTAGATTCACATTTTCACTCACATTTAAGTTCTTCACATCAACTGCTTCTCTTCCTCAAAATCTTCCTGTAGAACATGATATATCCGCGCAGCTCTTCTCCATTCTCTCTCGCCCCAATTGGCAGAAGCATCCTTCTCTGAAAGTCTTAATCCCATCTATTTCTCCGTCTCATATCTCTGCCCTTTTCGCCCTTAATCTCGATCCCCAAACTGCTCTTGCGTTTTTCAATTGGATCGGGCAGAAGCATGGATTCAAACACAACGTTCAATCCTATGTTTCTATTATAAATATCCTTGTTCCCAATGGCTACCTCCACATTGCTGAAAAGATGCGGATTTTGATGATTAAGTCGACGGATTCCTTAGAGAATGCTCTGTTCGTGTTGGAAATGCTGCGGAGCATGAACCGCCGGGGGGATGATTTCAAATTTAAGCTCACTCTTAGGTGCTATAACATGCTCTTGATGTTGTTGTCGAGGTTTCTCATGATTGATGAAATGAAAAGTGTGTATTTAGAGATGTTGGATGACATGGTTACCCCAAATATATATACCTTCAACACAATGGTAAATGGATATTGTAAATTGGGTTATGTAGTTGAAGCAGAGTTGTATGTCAGTAAGATAGTGCAAGCCGGTTTGAGTTTGGATACATTTACTTATACGTCTTTGATATTAGGATATTGTAGGAATAAGAATGTAGATGGTGCGTATAGAATTTTTCTATCGATGCCGAGCAAAGGTTGCCGCAGGAATGAGGTTTCTTATACTAATATGATTAATGGATTTTGTGAAGCCAGGAGGATTGATGAAGCTCTTAAATTGTTTTCACAAATGCACGAGGATAATTGTTCGCCAACTGTTCGTACCTATACGATTCTCATACATGCAATGTGTCAATTGGGCAGGAAAACAGAAGCATTTAGTATGTTCGAGGAGATGACTGAGAAGGGTTCTGAGCCAAATGTATATACCTGGACGGTCCTCATTCATAGTTTATGTGAAGACAACAATTTTGATGATGCCAAGAAAATGCTAAATGGAATGCTAGAGAAAGGATTGGTTCCAAGTTTGGTCACGTACAATGCCTTAATTGATGGTTATTGTAAGAAAGGAATGAGTATGAGTGCCTTGGAAATTTTGAGCTTGATGGAATCGAATAATTGTAGTCCAAATGCTCGCACTTATAATGAATTGATATTGGGGTTTTGCAGGGCTAAGAATGTCCACAAGGCCATGTCACTACTTAATGAAATGCTCGAGCGGAAGCTTCAACCAGATGTAGTTACCTACAACCTATTAATCCATGGACAGTGCAAAGAAGGGCATCTGGATAGTGCTTATAAGTTGCTTAGTTTGATGAATGAAAGTGGTTTGGTTCCTGATGAGTGGACGTACAGTGTCTTTGTAGATACTCTCTGTAAAAGAGAGCAGGTTGAAGAAGCTCGTCTTCTCTTTGACTCTCTAAAGGTGAAAGGCATAAAGGCAAATGAAGTAATATACAGTGCTTTGATTGATGGCTATTGCAAGGTGGGAAAAGTCAGTGATGGTCATTCATTGCTTGATAAAATGCTTAGTGATGGATGGGTTCCAAATTCATTTACTTATAATTCCTTGATTGATGGATATTGCAAAGAGAAAAATTATCAAGAAGCTCTTTTACTTATGGAAATAATGATGAAGAGGGGCATTAAGCCTGCTGTTGATACTTACACCATTCTTATAGAAAATTTATTAAAAGATGGTGAGTTTGACCGTGCTCATAATATGTTTGATCAAATGCTTTCCACGGGTTCTCATCCTGATGTATTTATATATACTGCATTTATTCATGCATATTGTAGCCAGGGTAGACTAAAAGATGCAGAGGTTTTAATTTATAAAATGAATGAAAAAGGAATATTGCCAGACACTCTTCTTTATACATTATTGATTGATGCATATGGACGGTTTGGATCAATTGATGATGCTTTTGACATTCTGAAGCATATGCATGATGTTGGTTGTGAGCCATCTTTCTACACTTATTCTTATTTAATTAAACATCTCTCGAACGAAAAACTGAAAGAAGTAAATAGTAATTCGGAGTTGAGTGATTTGTCATCAGGGGTTGCCTCCAATGATTTTTCCAACTTTTGGAGGAGAGTAGATTATGAATTCGCTTTGGAGTTGTTTGGGAAGATGGTCAAGCATGGCTGTGCACCTAATGCTAATACTTATAGCAAGTTTATTACAGGTCTTTGCAAGGTTGAATGCTTGGAAATTGCCCAGAGGTTGTTTGATCATATGAAAGAAAAAGGACTATCGCCTAATGAAGACATTTACAACTCTCTTCTTCGTTGTTCTTGCCGATCAGGATTGTATGGGAATGCAGTGAGATGGTTAGATATCATGATAGAGCAAGGACATTTACCACATTTAGATTCTTGCAAGCTGCTGCTTTGTGGATTGTATGACGAAGGAAATAATGAGAAAGCAAAAACAGTGTTTTATAGTTTACTTCAGTGTGGGTATAATTATGATGAAATGACTTGGAAAGTACTTATTGATGGCTTACTTAAGAAGGGCCTTGTTGATAAATGCTCTGAATTATTTGGCATCATGGAGAAACAAGGTTGCCAAATTCATCCTAAGACATATAGTATGTTGATTGAGGCATTTGATGGTATTCAGGATATCGATTAA
Coding sequence (CDS)
ATGAATCTTCTTCCATCATCGCCAAACTCTTCATTTATGCATGGAGTCTTCACTGCCGTTCGATGCCCCACGATGATTAGAAATTCCGCAGTCATTATCAACTCAGGTCAGCTTCTCATCGTCCATGGATTCAGGCTTAGATTCACATTTTCACTCACATTTAAGTTCTTCACATCAACTGCTTCTCTTCCTCAAAATCTTCCTGTAGAACATGATATATCCGCGCAGCTCTTCTCCATTCTCTCTCGCCCCAATTGGCAGAAGCATCCTTCTCTGAAAGTCTTAATCCCATCTATTTCTCCGTCTCATATCTCTGCCCTTTTCGCCCTTAATCTCGATCCCCAAACTGCTCTTGCGTTTTTCAATTGGATCGGGCAGAAGCATGGATTCAAACACAACGTTCAATCCTATGTTTCTATTATAAATATCCTTGTTCCCAATGGCTACCTCCACATTGCTGAAAAGATGCGGATTTTGATGATTAAGTCGACGGATTCCTTAGAGAATGCTCTGTTCGTGTTGGAAATGCTGCGGAGCATGAACCGCCGGGGGGATGATTTCAAATTTAAGCTCACTCTTAGGTGCTATAACATGCTCTTGATGTTGTTGTCGAGGTTTCTCATGATTGATGAAATGAAAAGTGTGTATTTAGAGATGTTGGATGACATGGTTACCCCAAATATATATACCTTCAACACAATGGTAAATGGATATTGTAAATTGGGTTATGTAGTTGAAGCAGAGTTGTATGTCAGTAAGATAGTGCAAGCCGGTTTGAGTTTGGATACATTTACTTATACGTCTTTGATATTAGGATATTGTAGGAATAAGAATGTAGATGGTGCGTATAGAATTTTTCTATCGATGCCGAGCAAAGGTTGCCGCAGGAATGAGGTTTCTTATACTAATATGATTAATGGATTTTGTGAAGCCAGGAGGATTGATGAAGCTCTTAAATTGTTTTCACAAATGCACGAGGATAATTGTTCGCCAACTGTTCGTACCTATACGATTCTCATACATGCAATGTGTCAATTGGGCAGGAAAACAGAAGCATTTAGTATGTTCGAGGAGATGACTGAGAAGGGTTCTGAGCCAAATGTATATACCTGGACGGTCCTCATTCATAGTTTATGTGAAGACAACAATTTTGATGATGCCAAGAAAATGCTAAATGGAATGCTAGAGAAAGGATTGGTTCCAAGTTTGGTCACGTACAATGCCTTAATTGATGGTTATTGTAAGAAAGGAATGAGTATGAGTGCCTTGGAAATTTTGAGCTTGATGGAATCGAATAATTGTAGTCCAAATGCTCGCACTTATAATGAATTGATATTGGGGTTTTGCAGGGCTAAGAATGTCCACAAGGCCATGTCACTACTTAATGAAATGCTCGAGCGGAAGCTTCAACCAGATGTAGTTACCTACAACCTATTAATCCATGGACAGTGCAAAGAAGGGCATCTGGATAGTGCTTATAAGTTGCTTAGTTTGATGAATGAAAGTGGTTTGGTTCCTGATGAGTGGACGTACAGTGTCTTTGTAGATACTCTCTGTAAAAGAGAGCAGGTTGAAGAAGCTCGTCTTCTCTTTGACTCTCTAAAGGTGAAAGGCATAAAGGCAAATGAAGTAATATACAGTGCTTTGATTGATGGCTATTGCAAGGTGGGAAAAGTCAGTGATGGTCATTCATTGCTTGATAAAATGCTTAGTGATGGATGGGTTCCAAATTCATTTACTTATAATTCCTTGATTGATGGATATTGCAAAGAGAAAAATTATCAAGAAGCTCTTTTACTTATGGAAATAATGATGAAGAGGGGCATTAAGCCTGCTGTTGATACTTACACCATTCTTATAGAAAATTTATTAAAAGATGGTGAGTTTGACCGTGCTCATAATATGTTTGATCAAATGCTTTCCACGGGTTCTCATCCTGATGTATTTATATATACTGCATTTATTCATGCATATTGTAGCCAGGGTAGACTAAAAGATGCAGAGGTTTTAATTTATAAAATGAATGAAAAAGGAATATTGCCAGACACTCTTCTTTATACATTATTGATTGATGCATATGGACGGTTTGGATCAATTGATGATGCTTTTGACATTCTGAAGCATATGCATGATGTTGGTTGTGAGCCATCTTTCTACACTTATTCTTATTTAATTAAACATCTCTCGAACGAAAAACTGAAAGAAGTAAATAGTAATTCGGAGTTGAGTGATTTGTCATCAGGGGTTGCCTCCAATGATTTTTCCAACTTTTGGAGGAGAGTAGATTATGAATTCGCTTTGGAGTTGTTTGGGAAGATGGTCAAGCATGGCTGTGCACCTAATGCTAATACTTATAGCAAGTTTATTACAGGTCTTTGCAAGGTTGAATGCTTGGAAATTGCCCAGAGGTTGTTTGATCATATGAAAGAAAAAGGACTATCGCCTAATGAAGACATTTACAACTCTCTTCTTCGTTGTTCTTGCCGATCAGGATTGTATGGGAATGCAGTGAGATGGTTAGATATCATGATAGAGCAAGGACATTTACCACATTTAGATTCTTGCAAGCTGCTGCTTTGTGGATTGTATGACGAAGGAAATAATGAGAAAGCAAAAACAGTGTTTTATAGTTTACTTCAGTGTGGGTATAATTATGATGAAATGACTTGGAAAGTACTTATTGATGGCTTACTTAAGAAGGGCCTTGTTGATAAATGCTCTGAATTATTTGGCATCATGGAGAAACAAGGTTGCCAAATTCATCCTAAGACATATAGTATGTTGATTGAGGCATTTGATGGTATTCAGGATATCGATTAA
Protein sequence
MNLLPSSPNSSFMHGVFTAVRCPTMIRNSAVIINSGQLLIVHGFRLRFTFSLTFKFFTSTASLPQNLPVEHDISAQLFSILSRPNWQKHPSLKVLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSYVSIINILVPNGYLHIAEKMRILMIKSTDSLENALFVLEMLRSMNRRGDDFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCEARRIDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLMESNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSLKVKGIKANEVIYSALIDGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGIKPAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGCEPSFYTYSYLIKHLSNEKLKEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKMVKHGCAPNANTYSKFITGLCKVECLEIAQRLFDHMKEKGLSPNEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGHLPHLDSCKLLLCGLYDEGNNEKAKTVFYSLLQCGYNYDEMTWKVLIDGLLKKGLVDKCSELFGIMEKQGCQIHPKTYSMLIEAFDGIQDID
Homology
BLAST of CmaCh05G009720 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 970.7 bits (2508), Expect = 1.2e-281
Identity = 484/922 (52.49%), Postives = 655/922 (71.04%), Query Frame = 0
Query: 25 MIRNSAVIINSGQLLIVHGFR-LRFTFS--------LTFKFFTSTASLPQNLPVEH---- 84
MIR NSG V F L+ FS +T + F S + L +NLP E
Sbjct: 1 MIRRIQPRCNSGLTGSVSAFEVLKKKFSTDVTVPSPVTRRQFCSVSPLLRNLPEEESDSM 60
Query: 85 DISAQLFSILSRPNWQKHPSLKVLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFK 144
+ +L SILS+PNW K PSLK ++ +ISPSH+S+LF+L+LDP+TAL F +WI Q +K
Sbjct: 61 SVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYK 120
Query: 145 HNVQSYVSIINILVPNGYLHIAEKMRILMIKSTDSLENALFVLEMLRSMNR-RGDDFKFK 204
H+V SY S++ +L+ NGY+ + K+R+LMIKS DS+ +AL+VL++ R MN+ + K+K
Sbjct: 121 HSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYK 180
Query: 205 LTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELY 264
L + CYN LL L+RF ++DEMK VY+EML+D V PNIYT+N MVNGYCKLG V EA Y
Sbjct: 181 LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 265 VSKIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCE 324
VSKIV+AGL D FTYTSLI+GYC+ K++D A+++F MP KGCRRNEV+YT++I+G C
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 325 ARRIDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYT 384
ARRIDEA+ LF +M +D C PTVRTYT+LI ++C RK+EA ++ +EM E G +PN++T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 385 WTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLME 444
+TVLI SLC F+ A+++L MLEKGL+P+++TYNALI+GYCK+GM A++++ LME
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 445 SNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLD 504
S SPN RTYNELI G+C++ NVHKAM +LN+MLERK+ PDVVTYN LI GQC+ G+ D
Sbjct: 421 SRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 480
Query: 505 SAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSLKVKGIKANEVIYSALI 564
SAY+LLSLMN+ GLVPD+WTY+ +D+LCK ++VEEA LFDSL+ KG+ N V+Y+ALI
Sbjct: 481 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 540
Query: 565 DGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGIK 624
DGYCK GKV + H +L+KMLS +PNS T+N+LI G C + +EA LL E M+K G++
Sbjct: 541 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 600
Query: 625 PAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVL 684
P V T TILI LLKDG+FD A++ F QMLS+G+ PD YT FI YC +GRL DAE +
Sbjct: 601 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 660
Query: 685 IYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGCEPSFYTYSYLIKHLSN 744
+ KM E G+ PD Y+ LI YG G + AFD+LK M D GCEPS +T+ LIKHL
Sbjct: 661 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 720
Query: 745 EKL-KEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKMVKHGCAPNANTYSKFI 804
K K+ S EL +S+ ++++ +EL KMV+H PNA +Y K I
Sbjct: 721 MKYGKQKGSEPELCAMSN------------MMEFDTVVELLEKMVEHSVTPNAKSYEKLI 780
Query: 805 TGLCKVECLEIAQRLFDHM-KEKGLSPNEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGH 864
G+C+V L +A+++FDHM + +G+SP+E ++N+LL C C+ + A + +D MI GH
Sbjct: 781 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 840
Query: 865 LPHLDSCKLLLCGLYDEGNNEKAKTVFYSLLQCGYNYDEMTWKVLIDGLLKKGLVDKCSE 924
LP L+SCK+L+CGLY +G E+ +VF +LLQCGY DE+ WK++IDG+ K+GLV+ E
Sbjct: 841 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 900
Query: 925 LFGIMEKQGCQIHPKTYSMLIE 931
LF +MEK GC+ +TYS+LIE
Sbjct: 901 LFNVMEKNGCKFSSQTYSLLIE 909
BLAST of CmaCh05G009720 vs. ExPASy Swiss-Prot
Match:
Q9SFV9 (Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g07290 PE=2 SV=1)
HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-131
Identity = 271/870 (31.15%), Postives = 468/870 (53.79%), Query Frame = 0
Query: 57 FTSTASLPQNLPVEHDISAQLFSILSRPNWQKHPSLKVLIPSISPSHISALFAL-NLDPQ 116
F S +S P + + + S+L PNW+K+ SLK L+ ++P+ S + +L D
Sbjct: 25 FFSVSSRPSLSSSDEVAAHDVASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDND 84
Query: 117 TALAFFNWIGQKHGFKHNVQSYVSIINILVPNGYLHIAEKMRILMIKSTDSLENALFVLE 176
+ FF W+ + + + ++ ++V +G +A + + +IK E + L+
Sbjct: 85 ICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEM--LK 144
Query: 177 MLRSMNRRGDDFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMV 236
++ + + F F+L CY+ LLM L++ + Y M D + + T+V
Sbjct: 145 LMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIV 204
Query: 237 NGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPSK-GC 296
N CK GY AE+++SKI++ G LD+ TSL+LG+CR N+ A ++F M + C
Sbjct: 205 NALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTC 264
Query: 297 RRNEVSYTNMINGFCEARRIDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFS 356
N VSY+ +I+G CE R++EA L QM E C P+ RTYT+LI A+C G +AF+
Sbjct: 265 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 324
Query: 357 MFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYC 416
+F+EM +G +PNV+T+TVLI LC D ++A + M++ + PS++TYNALI+GYC
Sbjct: 325 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 384
Query: 417 KKGMSMSALEILSLMESNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVV 476
K G + A E+L++ME C PN RT+NEL+ G CR +KA+ LL ML+ L PD+V
Sbjct: 385 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 444
Query: 477 TYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSL 536
+YN+LI G C+EGH+++AYKLLS MN + PD T++ ++ CK+ + + A +
Sbjct: 445 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 504
Query: 537 KVKGIKANEVIYSALIDGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNY 596
KGI +EV + LIDG CKVGK D +L+ ++ + + N ++D K
Sbjct: 505 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 564
Query: 597 QEALLLMEIMMKRGIKPAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAF 656
+E L ++ + K G+ P+V TYT L++ L++ G+ + + + M +G P+V+ YT
Sbjct: 565 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 624
Query: 657 IHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGC 716
I+ C GR+++AE L+ M + G+ P+ + YT+++ Y G +D A + ++ M + G
Sbjct: 625 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 684
Query: 717 EPSFYTYSYLIK-HLSNEKLKEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKM 776
E + YS L++ + ++K + + S +SD++ R D E EL +
Sbjct: 685 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA-----------LRETDPECINELISVV 744
Query: 777 VK-HGCAPNANTYSKFITGLCKVECLEIAQRLFDHMKEKGLSPNEDIYNSLLRCSCRSGL 836
+ GC + +T LCK + + L ++ E+G+ E + ++ C
Sbjct: 745 EQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVF-LEKAMDIIMESYCSKKK 804
Query: 837 YGNAVRWLDIMIEQGHLPHLDSCKLLLCGLYDEGNNEKAKTVFYSLLQCGYNYDEMTWKV 896
+ + + ++++ G +P S L++ GL EG+ E+A+ + LL ++
Sbjct: 805 HTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLT 864
Query: 897 LIDGLLKKGLVDKCSELFGIMEKQGCQIHP 923
++ L++ CSE+ ++++ C+ P
Sbjct: 865 YVECLMEGDETGDCSEVIDLVDQLHCRERP 878
BLAST of CmaCh05G009720 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 1.6e-89
Identity = 187/717 (26.08%), Postives = 343/717 (47.84%), Query Frame = 0
Query: 222 DMVTPNIYTFNTMVNGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDG 281
D VTP++ T+ ++ C+ G + + +++ G +D +T L+ G C +K
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 282 AYRIFL-SMPSKGCRRNEVSYTNMINGFCEARRIDEALKLFSQMHED---NCSPTVRTYT 341
A I L M GC N SY ++ G C+ R EAL+L M +D P V +YT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 342 ILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKMLNGMLEK 401
+I+ + G +A+S + EM ++G P+V T+ +I +LC+ D A ++LN M++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 402 GLVPSLVTYNALIDGYCKKGMSMSALEILSLMESNNCSPNARTYNELILGFCRAKNVHKA 461
G++P +TYN+++ GYC G A+ L M S+ P+ TY+ L+ C+ +A
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 462 MSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWTYSVFVDT 521
+ + M +R L+P++ TY L+ G +G L + LL LM +G+ PD + +S+ +
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 522 LCKREQVEEARLLFDSLKVKGIKANEVIYSALIDGYCKVGKVSDGHSLLDKMLSDGWVPN 581
K+ +V++A L+F ++ +G+ N V Y A+I CK G+V D ++M+ +G P
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 582 SFTYNSLIDGYCKEKNYQEALLLMEIMMKRGIKPAVDTYTILIENLLKDGEFDRAHNMFD 641
+ YNSLI G C ++ A L+ M+ RGI + +I++ K+G + +F+
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 642 QMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDAYGRFG 701
M+ G P+V Y I+ YC G++ +A L+ M G+ P+T+ Y+ LI+ Y +
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 702 SIDDAFDILKHMHDVGCEPSFYTYSYLIKHLSNEKLKEVNSNSELSDLSSGVASNDFSNF 761
++DA + K M G P TY+ +++ L +
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA--------------------- 620
Query: 762 WRRVDYEFALELFGKMVKHGCAPNANTYSKFITGLCKVECLEIAQRLFDHMKEKGLSPNE 821
A EL+ ++ + G +TY+ + GLCK + + A ++F ++ L
Sbjct: 621 --------AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 680
Query: 822 DIYNSLLRCSCRSGLYGNAVRWLDIMIEQGHLPHLDSCKLLLCGLYDEGNNEKAKTVFYS 881
+N ++ + G A G +P+ + +L+ + +G E+ +F S
Sbjct: 681 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 740
Query: 882 LLQCGYNYDEMTWKVLIDGLLKKGLVDKCSELFGIMEKQGCQIHPKTYSMLIEAFDG 935
+ G D ++ LL++G + + +++++ + T S+ I+ G
Sbjct: 741 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
BLAST of CmaCh05G009720 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 328.6 bits (841), Expect = 2.4e-88
Identity = 210/812 (25.86%), Postives = 369/812 (45.44%), Query Frame = 0
Query: 97 PSISPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSYVSIINILVPNGYLHIAEKM 156
P + P H++A+ DP AL FN + ++ GFKH + +Y S+I L GY E M
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKL---GYYGKFEAM 62
Query: 157 RILMIKSTDSLENALFVLEMLRSMNRRGDDFKFKLTLRCYNMLLMLLSRFLMIDEMKSVY 216
+++ +++ N + + +M G K + E +V+
Sbjct: 63 EEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK--------------------VQEAVNVF 122
Query: 217 LEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 276
M P ++++N +++ GY +A ++ G++ D +++T + +C+
Sbjct: 123 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 182
Query: 277 KNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCEARRIDEALKLFSQMHEDNCSPTVRTY 336
A R+ +M S+GC N V+Y ++ GF E E +LF +M S + T+
Sbjct: 183 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 242
Query: 337 TILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKMLNGMLE 396
L+ +C+ G E + +++ ++G PN++T+ + I LC+ D A +M+ ++E
Sbjct: 243 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 302
Query: 397 KGLVPSLVTYNALIDGYCKKGMSMSALEILSLMESNNCSPNARTYNELILGFCRAKNVHK 456
+G P ++TYN LI G CK A L M + P++ TYN LI G+C+ V
Sbjct: 303 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 362
Query: 457 AMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWTYSVFVD 516
A ++ + + PD TY LI G C EG + A L + G+ P+ Y+ +
Sbjct: 363 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 422
Query: 517 TLCKREQVEEARLLFDSLKVKGIKANEVIYSALIDGYCKVGKVSDGHSLLDKMLSDGWVP 576
L + + EA L + + KG+ ++ L++G CK+G VSD L+ M+S G+ P
Sbjct: 423 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 482
Query: 577 NSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGIKPAVDTYTILIENLLKDGEFDRAHNMF 636
+ FT+N LI GY + + AL ++++M+ G+ P V TY L+ L K +F+ +
Sbjct: 483 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 542
Query: 637 DQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDAYGRF 696
M+ G P++F + + + C +L +A L+ +M K + PD + + LID + +
Sbjct: 543 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 602
Query: 697 GSIDDAFDILKHMHDV-GCEPSFYTYSYLIKHLSNEKLKEVNSNSELSDLSSGVASNDFS 756
G +D A+ + + M + S TY+ +I H EKL
Sbjct: 603 GDLDGAYTLFRKMEEAYKVSSSTPTYNIII-HAFTEKL---------------------- 662
Query: 757 NFWRRVDYEFALELFGKMVKHGCAPNANTYSKFITGLCKVECLEIAQRLFDHMKEKGLSP 816
+ A +LF +MV P+ TY + G CK + + + M E G P
Sbjct: 663 ------NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 722
Query: 817 NEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGHLPHLDSCKLLLCGLYDEGNNEKAKTVF 876
+ ++ C C A + M+++G +P + +C + D+ K V
Sbjct: 723 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN---TICDV-DKKEVAAPKLVL 755
Query: 877 YSLLQ--CGYNYDEMTWKVLIDGLLKKGLVDK 906
LL+ C Y +++L DGL K L K
Sbjct: 783 EDLLKKSCITYY---AYELLFDGLRDKRLRKK 755
BLAST of CmaCh05G009720 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 2.1e-84
Identity = 215/729 (29.49%), Postives = 343/729 (47.05%), Query Frame = 0
Query: 192 TLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYV 251
TLRC + L +L++F + K+ + + +D+ T+ + Y L + E Y
Sbjct: 79 TLRCKCITLHILTKFKL---YKTAQI-LAEDVAA------KTLDDEYASLVFKSLQETY- 138
Query: 252 SKIVQAGLSLDTFTYTSLIL-GYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCE 311
L T + L++ Y R +D A I + G +SY +++
Sbjct: 139 ------DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 198
Query: 312 ARR-IDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVY 371
++R I A +F +M E SP V TY ILI C G A ++F++M KG PNV
Sbjct: 199 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 258
Query: 372 TWTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLM 431
T+ LI C+ DD K+L M KGL P+L++YN +I+G C++G +L+ M
Sbjct: 259 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 318
Query: 432 ESNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHL 491
S + TYN LI G+C+ N H+A+ + EML L P V+TY LIH CK G++
Sbjct: 319 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 378
Query: 492 DSAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSLKVKGIKANEVIYSAL 551
+ A + L M GL P+E TY+ VD ++ + EA + + G + V Y+AL
Sbjct: 379 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 438
Query: 552 IDGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGI 611
I+G+C GK+ D ++L+ M G P+ +Y++++ G+C+ + EAL + M+++GI
Sbjct: 439 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 498
Query: 612 KPAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEV 671
KP TY+ LI+ + A +++++ML G PD F YTA I+AYC +G L+ A
Sbjct: 499 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 558
Query: 672 LIYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGCEPSFYTYSYLIKHLS 731
L +M EKG+LPD + Y++LI+ + +A +L + PS TY LI++ S
Sbjct: 559 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 618
Query: 732 NEKLKEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKMVKHGCAPNANTYSKFI 791
N + K V S I
Sbjct: 619 NIEFKSVVS-------------------------------------------------LI 678
Query: 792 TGLCKVECLEIAQRLFDHMKEKGLSPNEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGHL 851
G C + A ++F+ M K P+ YN ++ CR+G A M++ G L
Sbjct: 679 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 738
Query: 852 PHLDSCKLLLCGLYDEGN-NEKAKTVFYSLLQCGYNYDEMTWKVLIDGLLKKGLVDKCSE 911
H + L+ L+ EG NE + + L C + E KVL++ ++G +D +
Sbjct: 739 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLD 740
Query: 912 LFGIMEKQG 918
+ M K G
Sbjct: 799 VLAEMAKDG 740
BLAST of CmaCh05G009720 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 970.7 bits (2508), Expect = 8.5e-283
Identity = 484/922 (52.49%), Postives = 655/922 (71.04%), Query Frame = 0
Query: 25 MIRNSAVIINSGQLLIVHGFR-LRFTFS--------LTFKFFTSTASLPQNLPVEH---- 84
MIR NSG V F L+ FS +T + F S + L +NLP E
Sbjct: 1 MIRRIQPRCNSGLTGSVSAFEVLKKKFSTDVTVPSPVTRRQFCSVSPLLRNLPEEESDSM 60
Query: 85 DISAQLFSILSRPNWQKHPSLKVLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFK 144
+ +L SILS+PNW K PSLK ++ +ISPSH+S+LF+L+LDP+TAL F +WI Q +K
Sbjct: 61 SVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYK 120
Query: 145 HNVQSYVSIINILVPNGYLHIAEKMRILMIKSTDSLENALFVLEMLRSMNR-RGDDFKFK 204
H+V SY S++ +L+ NGY+ + K+R+LMIKS DS+ +AL+VL++ R MN+ + K+K
Sbjct: 121 HSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYK 180
Query: 205 LTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELY 264
L + CYN LL L+RF ++DEMK VY+EML+D V PNIYT+N MVNGYCKLG V EA Y
Sbjct: 181 LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 265 VSKIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCE 324
VSKIV+AGL D FTYTSLI+GYC+ K++D A+++F MP KGCRRNEV+YT++I+G C
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 325 ARRIDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYT 384
ARRIDEA+ LF +M +D C PTVRTYT+LI ++C RK+EA ++ +EM E G +PN++T
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 385 WTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLME 444
+TVLI SLC F+ A+++L MLEKGL+P+++TYNALI+GYCK+GM A++++ LME
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 445 SNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLD 504
S SPN RTYNELI G+C++ NVHKAM +LN+MLERK+ PDVVTYN LI GQC+ G+ D
Sbjct: 421 SRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 480
Query: 505 SAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSLKVKGIKANEVIYSALI 564
SAY+LLSLMN+ GLVPD+WTY+ +D+LCK ++VEEA LFDSL+ KG+ N V+Y+ALI
Sbjct: 481 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 540
Query: 565 DGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGIK 624
DGYCK GKV + H +L+KMLS +PNS T+N+LI G C + +EA LL E M+K G++
Sbjct: 541 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 600
Query: 625 PAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVL 684
P V T TILI LLKDG+FD A++ F QMLS+G+ PD YT FI YC +GRL DAE +
Sbjct: 601 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 660
Query: 685 IYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGCEPSFYTYSYLIKHLSN 744
+ KM E G+ PD Y+ LI YG G + AFD+LK M D GCEPS +T+ LIKHL
Sbjct: 661 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 720
Query: 745 EKL-KEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKMVKHGCAPNANTYSKFI 804
K K+ S EL +S+ ++++ +EL KMV+H PNA +Y K I
Sbjct: 721 MKYGKQKGSEPELCAMSN------------MMEFDTVVELLEKMVEHSVTPNAKSYEKLI 780
Query: 805 TGLCKVECLEIAQRLFDHM-KEKGLSPNEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGH 864
G+C+V L +A+++FDHM + +G+SP+E ++N+LL C C+ + A + +D MI GH
Sbjct: 781 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 840
Query: 865 LPHLDSCKLLLCGLYDEGNNEKAKTVFYSLLQCGYNYDEMTWKVLIDGLLKKGLVDKCSE 924
LP L+SCK+L+CGLY +G E+ +VF +LLQCGY DE+ WK++IDG+ K+GLV+ E
Sbjct: 841 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 900
Query: 925 LFGIMEKQGCQIHPKTYSMLIE 931
LF +MEK GC+ +TYS+LIE
Sbjct: 901 LFNVMEKNGCKFSSQTYSLLIE 909
BLAST of CmaCh05G009720 vs. TAIR 10
Match:
AT3G07290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 471.9 bits (1213), Expect = 1.2e-132
Identity = 271/870 (31.15%), Postives = 468/870 (53.79%), Query Frame = 0
Query: 57 FTSTASLPQNLPVEHDISAQLFSILSRPNWQKHPSLKVLIPSISPSHISALFAL-NLDPQ 116
F S +S P + + + S+L PNW+K+ SLK L+ ++P+ S + +L D
Sbjct: 25 FFSVSSRPSLSSSDEVAAHDVASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDND 84
Query: 117 TALAFFNWIGQKHGFKHNVQSYVSIINILVPNGYLHIAEKMRILMIKSTDSLENALFVLE 176
+ FF W+ + + + ++ ++V +G +A + + +IK E + L+
Sbjct: 85 ICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEM--LK 144
Query: 177 MLRSMNRRGDDFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMV 236
++ + + F F+L CY+ LLM L++ + Y M D + + T+V
Sbjct: 145 LMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIV 204
Query: 237 NGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDGAYRIFLSMPSK-GC 296
N CK GY AE+++SKI++ G LD+ TSL+LG+CR N+ A ++F M + C
Sbjct: 205 NALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTC 264
Query: 297 RRNEVSYTNMINGFCEARRIDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFS 356
N VSY+ +I+G CE R++EA L QM E C P+ RTYT+LI A+C G +AF+
Sbjct: 265 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 324
Query: 357 MFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYC 416
+F+EM +G +PNV+T+TVLI LC D ++A + M++ + PS++TYNALI+GYC
Sbjct: 325 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 384
Query: 417 KKGMSMSALEILSLMESNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVV 476
K G + A E+L++ME C PN RT+NEL+ G CR +KA+ LL ML+ L PD+V
Sbjct: 385 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 444
Query: 477 TYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSL 536
+YN+LI G C+EGH+++AYKLLS MN + PD T++ ++ CK+ + + A +
Sbjct: 445 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLM 504
Query: 537 KVKGIKANEVIYSALIDGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNY 596
KGI +EV + LIDG CKVGK D +L+ ++ + + N ++D K
Sbjct: 505 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKV 564
Query: 597 QEALLLMEIMMKRGIKPAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAF 656
+E L ++ + K G+ P+V TYT L++ L++ G+ + + + M +G P+V+ YT
Sbjct: 565 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 624
Query: 657 IHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGC 716
I+ C GR+++AE L+ M + G+ P+ + YT+++ Y G +D A + ++ M + G
Sbjct: 625 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 684
Query: 717 EPSFYTYSYLIK-HLSNEKLKEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKM 776
E + YS L++ + ++K + + S +SD++ R D E EL +
Sbjct: 685 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA-----------LRETDPECINELISVV 744
Query: 777 VK-HGCAPNANTYSKFITGLCKVECLEIAQRLFDHMKEKGLSPNEDIYNSLLRCSCRSGL 836
+ GC + +T LCK + + L ++ E+G+ E + ++ C
Sbjct: 745 EQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVF-LEKAMDIIMESYCSKKK 804
Query: 837 YGNAVRWLDIMIEQGHLPHLDSCKLLLCGLYDEGNNEKAKTVFYSLLQCGYNYDEMTWKV 896
+ + + ++++ G +P S L++ GL EG+ E+A+ + LL ++
Sbjct: 805 HTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLT 864
Query: 897 LIDGLLKKGLVDKCSELFGIMEKQGCQIHP 923
++ L++ CSE+ ++++ C+ P
Sbjct: 865 YVECLMEGDETGDCSEVIDLVDQLHCRERP 878
BLAST of CmaCh05G009720 vs. TAIR 10
Match:
AT1G77340.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 426.4 bits (1095), Expect = 5.9e-119
Identity = 216/420 (51.43%), Postives = 290/420 (69.05%), Query Frame = 0
Query: 93 KVLIPSISPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSYVSIINILVPNGYLHI 152
K+ P +PSH+S+LF+LNLDPQTAL+F +WI + FKHNV SY S++ +L +
Sbjct: 19 KISYPFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYE 78
Query: 153 AEKMRILMIKSTDSLENALFVLEMLRSMNRRGDDF--KFKLTLRCYNMLLMLLSRFLMID 212
K+ ILMIKS +S+ +ALFV++ R+M R+GD F K+KLT +CYN LL L+RF +++
Sbjct: 79 VPKITILMIKSCNSVRDALFVVDFCRTM-RKGDSFEIKYKLTPKCYNNLLSSLARFGLVE 138
Query: 213 EMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLI 272
EMK +Y EML+D+V+P+IYTFNT+VNGYCKLGYVVEA+ YV+ ++QAG D FTYTS I
Sbjct: 139 EMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFI 198
Query: 273 LGYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCEARRIDEALKLFSQMHEDNCS 332
G+CR K VD A+++F M GC RNEVSYT +I G EA++IDEAL L +M +DNC
Sbjct: 199 TGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC 258
Query: 333 PTVRTYTILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKM 392
P VRTYT+LI A+C G+K+EA ++F++M+E G +P+ +TVLI S C + D+A +
Sbjct: 259 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 318
Query: 393 LNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLMESNNCSPNARTYNELILGFCR 452
L MLE GL+P+++TYNALI G+CK
Sbjct: 319 LEHMLENGLMPNVITYNALIKGFCK----------------------------------- 378
Query: 453 AKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWT 511
KNVHKAM LL++MLE+ L PD++TYN LI GQC G+LDSAY+LLSLM ESGLVP++ T
Sbjct: 379 -KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
BLAST of CmaCh05G009720 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 328.6 bits (841), Expect = 1.7e-89
Identity = 210/812 (25.86%), Postives = 369/812 (45.44%), Query Frame = 0
Query: 97 PSISPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSYVSIINILVPNGYLHIAEKM 156
P + P H++A+ DP AL FN + ++ GFKH + +Y S+I L GY E M
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKL---GYYGKFEAM 62
Query: 157 RILMIKSTDSLENALFVLEMLRSMNRRGDDFKFKLTLRCYNMLLMLLSRFLMIDEMKSVY 216
+++ +++ N + + +M G K + E +V+
Sbjct: 63 EEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK--------------------VQEAVNVF 122
Query: 217 LEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 276
M P ++++N +++ GY +A ++ G++ D +++T + +C+
Sbjct: 123 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 182
Query: 277 KNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCEARRIDEALKLFSQMHEDNCSPTVRTY 336
A R+ +M S+GC N V+Y ++ GF E E +LF +M S + T+
Sbjct: 183 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 242
Query: 337 TILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVYTWTVLIHSLCEDNNFDDAKKMLNGMLE 396
L+ +C+ G E + +++ ++G PN++T+ + I LC+ D A +M+ ++E
Sbjct: 243 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 302
Query: 397 KGLVPSLVTYNALIDGYCKKGMSMSALEILSLMESNNCSPNARTYNELILGFCRAKNVHK 456
+G P ++TYN LI G CK A L M + P++ TYN LI G+C+ V
Sbjct: 303 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 362
Query: 457 AMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHLDSAYKLLSLMNESGLVPDEWTYSVFVD 516
A ++ + + PD TY LI G C EG + A L + G+ P+ Y+ +
Sbjct: 363 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 422
Query: 517 TLCKREQVEEARLLFDSLKVKGIKANEVIYSALIDGYCKVGKVSDGHSLLDKMLSDGWVP 576
L + + EA L + + KG+ ++ L++G CK+G VSD L+ M+S G+ P
Sbjct: 423 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 482
Query: 577 NSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGIKPAVDTYTILIENLLKDGEFDRAHNMF 636
+ FT+N LI GY + + AL ++++M+ G+ P V TY L+ L K +F+ +
Sbjct: 483 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 542
Query: 637 DQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEVLIYKMNEKGILPDTLLYTLLIDAYGRF 696
M+ G P++F + + + C +L +A L+ +M K + PD + + LID + +
Sbjct: 543 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 602
Query: 697 GSIDDAFDILKHMHDV-GCEPSFYTYSYLIKHLSNEKLKEVNSNSELSDLSSGVASNDFS 756
G +D A+ + + M + S TY+ +I H EKL
Sbjct: 603 GDLDGAYTLFRKMEEAYKVSSSTPTYNIII-HAFTEKL---------------------- 662
Query: 757 NFWRRVDYEFALELFGKMVKHGCAPNANTYSKFITGLCKVECLEIAQRLFDHMKEKGLSP 816
+ A +LF +MV P+ TY + G CK + + + M E G P
Sbjct: 663 ------NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 722
Query: 817 NEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGHLPHLDSCKLLLCGLYDEGNNEKAKTVF 876
+ ++ C C A + M+++G +P + +C + D+ K V
Sbjct: 723 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN---TICDV-DKKEVAAPKLVL 755
Query: 877 YSLLQ--CGYNYDEMTWKVLIDGLLKKGLVDK 906
LL+ C Y +++L DGL K L K
Sbjct: 783 EDLLKKSCITYY---AYELLFDGLRDKRLRKK 755
BLAST of CmaCh05G009720 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 315.5 bits (807), Expect = 1.5e-85
Identity = 215/729 (29.49%), Postives = 343/729 (47.05%), Query Frame = 0
Query: 192 TLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIYTFNTMVNGYCKLGYVVEAELYV 251
TLRC + L +L++F + K+ + + +D+ T+ + Y L + E Y
Sbjct: 79 TLRCKCITLHILTKFKL---YKTAQI-LAEDVAA------KTLDDEYASLVFKSLQETY- 138
Query: 252 SKIVQAGLSLDTFTYTSLIL-GYCRNKNVDGAYRIFLSMPSKGCRRNEVSYTNMINGFCE 311
L T + L++ Y R +D A I + G +SY +++
Sbjct: 139 ------DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 198
Query: 312 ARR-IDEALKLFSQMHEDNCSPTVRTYTILIHAMCQLGRKTEAFSMFEEMTEKGSEPNVY 371
++R I A +F +M E SP V TY ILI C G A ++F++M KG PNV
Sbjct: 199 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 258
Query: 372 TWTVLIHSLCEDNNFDDAKKMLNGMLEKGLVPSLVTYNALIDGYCKKGMSMSALEILSLM 431
T+ LI C+ DD K+L M KGL P+L++YN +I+G C++G +L+ M
Sbjct: 259 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 318
Query: 432 ESNNCSPNARTYNELILGFCRAKNVHKAMSLLNEMLERKLQPDVVTYNLLIHGQCKEGHL 491
S + TYN LI G+C+ N H+A+ + EML L P V+TY LIH CK G++
Sbjct: 319 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 378
Query: 492 DSAYKLLSLMNESGLVPDEWTYSVFVDTLCKREQVEEARLLFDSLKVKGIKANEVIYSAL 551
+ A + L M GL P+E TY+ VD ++ + EA + + G + V Y+AL
Sbjct: 379 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 438
Query: 552 IDGYCKVGKVSDGHSLLDKMLSDGWVPNSFTYNSLIDGYCKEKNYQEALLLMEIMMKRGI 611
I+G+C GK+ D ++L+ M G P+ +Y++++ G+C+ + EAL + M+++GI
Sbjct: 439 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 498
Query: 612 KPAVDTYTILIENLLKDGEFDRAHNMFDQMLSTGSHPDVFIYTAFIHAYCSQGRLKDAEV 671
KP TY+ LI+ + A +++++ML G PD F YTA I+AYC +G L+ A
Sbjct: 499 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 558
Query: 672 LIYKMNEKGILPDTLLYTLLIDAYGRFGSIDDAFDILKHMHDVGCEPSFYTYSYLIKHLS 731
L +M EKG+LPD + Y++LI+ + +A +L + PS TY LI++ S
Sbjct: 559 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 618
Query: 732 NEKLKEVNSNSELSDLSSGVASNDFSNFWRRVDYEFALELFGKMVKHGCAPNANTYSKFI 791
N + K V S I
Sbjct: 619 NIEFKSVVS-------------------------------------------------LI 678
Query: 792 TGLCKVECLEIAQRLFDHMKEKGLSPNEDIYNSLLRCSCRSGLYGNAVRWLDIMIEQGHL 851
G C + A ++F+ M K P+ YN ++ CR+G A M++ G L
Sbjct: 679 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 738
Query: 852 PHLDSCKLLLCGLYDEGN-NEKAKTVFYSLLQCGYNYDEMTWKVLIDGLLKKGLVDKCSE 911
H + L+ L+ EG NE + + L C + E KVL++ ++G +D +
Sbjct: 739 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLD 740
Query: 912 LFGIMEKQG 918
+ M K G
Sbjct: 799 VLAEMAKDG 740
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LSL9 | 1.2e-281 | 52.49 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
| Q9SFV9 | 1.7e-131 | 31.15 | Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidop... | [more] |
| Q76C99 | 1.6e-89 | 26.08 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
| Q9CA58 | 2.4e-88 | 25.86 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
| Q9FIX3 | 2.1e-84 | 29.49 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G65560.1 | 8.5e-283 | 52.49 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G07290.1 | 1.2e-132 | 31.15 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G77340.1 | 5.9e-119 | 51.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G74580.1 | 1.7e-89 | 25.86 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G39710.1 | 1.5e-85 | 29.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
