CmaCh05G007520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G007520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CBS domain-containing protein CBSX6-like
Location	Cma_Chr05: 4352172 .. 4355574 (+)
RNA-Seq Expression	CmaCh05G007520
Synteny	CmaCh05G007520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGGAAAATGACCAAATTCTTCTGCGTCGATTGACAGAGCTATCCATTAACTGTTTCTTGTTGTTTTTGTTGCGTTGTTGGGTGGTGGGTTTGAGCTGATCGAGCGATTTTTCAAGGACATTCACTCTGTACCTTCTTCCAATCGGTTCTTCATCATCAATGGCGGATTCTCTTTGCTCCTTGTTTTTGAGGCTCTGTAGATTGTCTATTACTGGGTTTGATCTTTTGCTTATTTTCCTTCATTCCCTTTTATAGCTTTTTCCCTTTTCACCGGGTTTTCCGGTTTCTCTCTATCTCTCTCTCTCCGCCGTTCGGTTCCCGAGAAATTTGAGACCTAACGATGCGAGCCTCGGTACTTTCCTTTACGCTCATCTTTTTTGTTGCTGTATGCGGAGTTTAATTTAATATTATCTTATTCTTGATTCTTGTACTTAGGGTTTTTTTTTTTTTTTTTTAATTGAATAATTGTCATGTTGGATCTGAAATCGGAGAAGAAGTGAAGAATCTTTCCATTTTTTTTTGTTCTGTATAGATTTTTAATCCTGGATTTCCTGGAAATCAGTGCCCTGCATGCGCTGTTGATACTGATCTTGGATTGTTTGAGGAGGTTTGTGTTGAAGATTGATGTTATAAGATTGGATTCTTTAGATTTTGGTTGGCTTTATTGCAGAGAGGTGAAGAATTATCATGGCATCAGTGTTTTTGTATCATGTGGTTGGGGATCTGACTGTAGGAAAGCCGGAGATGGTTGAGTTTTATGAGACGGAGACGATTGAAACGGCAATTCGGGTGATCAGAGAGTCGACGGAGTGTGGGATACCAATTTGGATGAGGAAAAGTCATGGAATTATTGAGAATGCTGAAATGAAACAGAGGAGATTTGTAGGAATTCTCTCGTCTTTGGATATCGTCGCCTTTCTGGCTCGAACGGAGAATCAAAAGGATCAAGATAGGGCAATGAAGACTCCAGTTTCGGAGGCTGTAGTTCCCAATCATTCGTTGTTGAGACAGGTCGATCCTGCAACAAGGTTAGCCTCTTTGTTTCATATGTTAATGTCTATGGTGTTTTGTTTTGTTAATAATTGATCATCTGATTAGAATTTAAGAGGCTTGTTCTATGTTTGGTTGATGGAATTTTGTAAATTGTTCATGAAGTGCTTCTATTGAATGCTACCAAAAGTAGTACTATACTGTTTCTTTTTTCTTTTTCCAGAATTTTGATCCTATTGCAATCTATATGCCTGTGAACTTTAGATTATTTTTCACTGTTTTTGACTAGTTTTCAGTGTTATGGGTCTTATGAGTCATGATTGTTTAACAAAAAGTTCTTTCTTCAAAGTGTATTGATCTATTGATGCAACGGCTCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGAGCTTTCCCCTCAAGGTTTTTAAAAAGTGTCTAATAGGGAGAGGTTTCCAAACCCTTATAAAAATTGTTTCGTTCTCCTCCCCAACCGATGTGGGGCCCAGCGTCTTCGTTGACACTTGTTCCCTTCTCCAATCGATGTGGGACCCTTAATCCACCCCCTTCGAGCCCAGCGTCCTAGCTGGCACATTGCCTCATGTCCACCCCTTTTCGGTGCTCAATCTCCTCGTTGACACATCGTCCGATGTCTGGCTCTGATACCATTTATAACTGTCCAAGCTCACCGCTAGCAGATATTGTCCTTTCTAGGCTTTCCCTTTCGGACTTTCGCTCAAGGTTTTTAAAATGTGTCGGCTAGGGAAAGGTTTTCACACCCTTATAAAAAAACTTTCATTGTTATATGAAAAGATAATGAAAAAGGAACAGGAGAAATCTAAGAACAACAAAGAAAACCCTTATAAAAATGTTTCGTTCTCCTCCCCAATAGATGTGGGATCTCCTATTCCGTTTTGATATCAGAATTGTTCATGGATTCATAAGGCAAGATCTGTGAGTATGACCACGAAATGTTTTTCTCCCTCGTTCCTGAACTCACTGTGGTTTAGATCCTTTTATATGCTTTTGACCCAAGAAACTAGAATTTTTAGAGGGGTTGAAAGATCTGTAGGAGAGTTGTGATCCCTTAATAGATTCCATGCTTCTCTTTACGTTTTCGTGTTTAAACATTTTTATAACTTCCATTGAAGTCTTATTTTGCTTGATTGTAGCCATTTCCTGGATTAGTTAGGCTCTTCTTGGGGTGCCCTGTTCTTGCATTCCCGTGTATATTTCACTCATTTACTGCGTGGGTGTGGCATTCAATTGATTTAACCTCTTGATCTGTCCATGTAAAAGATTGATTGATGCATTAGAAATGATGAAGCAAGGTGTGAGGCGTCTTCTAATCCGAAAAAGTGTGGTGTGGAAAGGAATGAGCAAAAGGTTTTCCGTTCTCTATAATGGTAAGTGGTTGAAGAACGTTGATACCTCTGTCGGTAGCAGCAATAACCTCAACGTAAATGCTAACCACCCATCGTCGTCTTCGACATCTACTTGTCACGATAAGTTTTGTTGTCTCTCAAGGGAAGATGTCATCCGTTTCCTTATTGGTTGTCTCGGTGCCCTTGCTCCTCTCCCTCTATCCTCCATCTCTACACTAGGGGTCATCAACCCAAACTACTGCTCGATCGACGCCTTGACTCCTGCAATCGATATCACTCATAAGCTTCCAGATGATCCTACTGCAGTTGCTGTGGTGGAAAACATGCATGATAATCAATACAGGATCATTGGAGAGATCTCAGCCTCCAAACTCTGGAAATGCAATTACTTGGCTGCTGCTTGGGTTTTAGCCAATCTTTCTGCTGGGCAGTTCGTGATGGGGGCGGAAGACAACATGGCCTCACGTATTGTCCCTGATCTATCCACCAATGCTAACGGTTGCGAGAACGACCGTGCTAATGCTGGTGGTGAAAAACGGGTAAGGAAATTCAGCAGTAGAAGCATCGGATTCAAGCCATCGAGCCCGGCATTGAGGATCAGTCGGAGCATGTACCGGGGCAGAAGTGCTCCTTTGACATGTAGAGTAACAAGTTCATTGGCTGCTGTTATGGCTCAGATGCTTTCTCATAAGGCAAGCCATGTGTGGGTAACTGAGGATGAAAATGATGAAATTTTGGTTGGAGTTGTGGGTTATGCTGATATTTTAGCTGCAGTTACGAAGCAACCTAGGTCGTTTATACGAGCTAATCGATCCTTCGAGGCGCTTGGAAATTCTATTCAGATCTAATATACTGCTTTTCGTACTTGTTATATAATATAAACGTGTCATGTATGAGAGAGATTTGAGGTTGTTGTAAACTTGTTTGCCTTGTTCTCTCATAAATTTTTGACAATTATCGTTGTTAATGGAATTGTATCTACTGCTAGTTTGTACTAAAATGTTTCTTTAGAACAAACACACTGCCC

mRNA sequence

CGAGGAAAATGACCAAATTCTTCTGCGTCGATTGACAGAGCTATCCATTAACTGTTTCTTGTTGTTTTTGTTGCGTTGTTGGGTGGTGGGTTTGAGCTGATCGAGCGATTTTTCAAGGACATTCACTCTGTACCTTCTTCCAATCGGTTCTTCATCATCAATGGCGGATTCTCTTTGCTCCTTGTTTTTGAGGCTCTGTAGATTGTCTATTACTGGGTTTGATCTTTTGCTTATTTTCCTTCATTCCCTTTTATAGCTTTTTCCCTTTTCACCGGGTTTTCCGGTTTCTCTCTATCTCTCTCTCTCCGCCGTTCGGTTCCCGAGAAATTTGAGACCTAACGATGCGAGCCTCGATTTTTAATCCTGGATTTCCTGGAAATCAGTGCCCTGCATGCGCTGTTGATACTGATCTTGGATTGTTTGAGGAGGTTTGTGTTGAAGATTGATGTTATAAGATTGGATTCTTTAGATTTTGGTTGGCTTTATTGCAGAGAGGTGAAGAATTATCATGGCATCAGTGTTTTTGTATCATGTGGTTGGGGATCTGACTGTAGGAAAGCCGGAGATGGTTGAGTTTTATGAGACGGAGACGATTGAAACGGCAATTCGGGTGATCAGAGAGTCGACGGAGTGTGGGATACCAATTTGGATGAGGAAAAGTCATGGAATTATTGAGAATGCTGAAATGAAACAGAGGAGATTTGTAGGAATTCTCTCGTCTTTGGATATCGTCGCCTTTCTGGCTCGAACGGAGAATCAAAAGGATCAAGATAGGGCAATGAAGACTCCAGTTTCGGAGGCTGTAGTTCCCAATCATTCGTTGTTGAGACAGGTCGATCCTGCAACAAGATTGATTGATGCATTAGAAATGATGAAGCAAGGTGTGAGGCGTCTTCTAATCCGAAAAAGTGTGGTGTGGAAAGGAATGAGCAAAAGGTTTTCCGTTCTCTATAATGGTAAGTGGTTGAAGAACGTTGATACCTCTGTCGGTAGCAGCAATAACCTCAACGTAAATGCTAACCACCCATCGTCGTCTTCGACATCTACTTGTCACGATAAGTTTTGTTGTCTCTCAAGGGAAGATGTCATCCGTTTCCTTATTGGTTGTCTCGGTGCCCTTGCTCCTCTCCCTCTATCCTCCATCTCTACACTAGGGGTCATCAACCCAAACTACTGCTCGATCGACGCCTTGACTCCTGCAATCGATATCACTCATAAGCTTCCAGATGATCCTACTGCAGTTGCTGTGGTGGAAAACATGCATGATAATCAATACAGGATCATTGGAGAGATCTCAGCCTCCAAACTCTGGAAATGCAATTACTTGGCTGCTGCTTGGGTTTTAGCCAATCTTTCTGCTGGGCAGTTCGTGATGGGGGCGGAAGACAACATGGCCTCACGTATTGTCCCTGATCTATCCACCAATGCTAACGGTTGCGAGAACGACCGTGCTAATGCTGGTGGTGAAAAACGGGTAAGGAAATTCAGCAGTAGAAGCATCGGATTCAAGCCATCGAGCCCGGCATTGAGGATCAGTCGGAGCATGTACCGGGGCAGAAGTGCTCCTTTGACATGTAGAGTAACAAGTTCATTGGCTGCTGTTATGGCTCAGATGCTTTCTCATAAGGCAAGCCATGTGTGGGTAACTGAGGATGAAAATGATGAAATTTTGGTTGGAGTTGTGGGTTATGCTGATATTTTAGCTGCAGTTACGAAGCAACCTAGGTCGTTTATACGAGCTAATCGATCCTTCGAGGCGCTTGGAAATTCTATTCAGATCTAATATACTGCTTTTCGTACTTGTTATATAATATAAACGTGTCATGTATGAGAGAGATTTGAGGTTGTTGTAAACTTGTTTGCCTTGTTCTCTCATAAATTTTTGACAATTATCGTTGTTAATGGAATTGTATCTACTGCTAGTTTGTACTAAAATGTTTCTTTAGAACAAACACACTGCCC

Coding sequence (CDS)

ATGGCATCAGTGTTTTTGTATCATGTGGTTGGGGATCTGACTGTAGGAAAGCCGGAGATGGTTGAGTTTTATGAGACGGAGACGATTGAAACGGCAATTCGGGTGATCAGAGAGTCGACGGAGTGTGGGATACCAATTTGGATGAGGAAAAGTCATGGAATTATTGAGAATGCTGAAATGAAACAGAGGAGATTTGTAGGAATTCTCTCGTCTTTGGATATCGTCGCCTTTCTGGCTCGAACGGAGAATCAAAAGGATCAAGATAGGGCAATGAAGACTCCAGTTTCGGAGGCTGTAGTTCCCAATCATTCGTTGTTGAGACAGGTCGATCCTGCAACAAGATTGATTGATGCATTAGAAATGATGAAGCAAGGTGTGAGGCGTCTTCTAATCCGAAAAAGTGTGGTGTGGAAAGGAATGAGCAAAAGGTTTTCCGTTCTCTATAATGGTAAGTGGTTGAAGAACGTTGATACCTCTGTCGGTAGCAGCAATAACCTCAACGTAAATGCTAACCACCCATCGTCGTCTTCGACATCTACTTGTCACGATAAGTTTTGTTGTCTCTCAAGGGAAGATGTCATCCGTTTCCTTATTGGTTGTCTCGGTGCCCTTGCTCCTCTCCCTCTATCCTCCATCTCTACACTAGGGGTCATCAACCCAAACTACTGCTCGATCGACGCCTTGACTCCTGCAATCGATATCACTCATAAGCTTCCAGATGATCCTACTGCAGTTGCTGTGGTGGAAAACATGCATGATAATCAATACAGGATCATTGGAGAGATCTCAGCCTCCAAACTCTGGAAATGCAATTACTTGGCTGCTGCTTGGGTTTTAGCCAATCTTTCTGCTGGGCAGTTCGTGATGGGGGCGGAAGACAACATGGCCTCACGTATTGTCCCTGATCTATCCACCAATGCTAACGGTTGCGAGAACGACCGTGCTAATGCTGGTGGTGAAAAACGGGTAAGGAAATTCAGCAGTAGAAGCATCGGATTCAAGCCATCGAGCCCGGCATTGAGGATCAGTCGGAGCATGTACCGGGGCAGAAGTGCTCCTTTGACATGTAGAGTAACAAGTTCATTGGCTGCTGTTATGGCTCAGATGCTTTCTCATAAGGCAAGCCATGTGTGGGTAACTGAGGATGAAAATGATGAAATTTTGGTTGGAGTTGTGGGTTATGCTGATATTTTAGCTGCAGTTACGAAGCAACCTAGGTCGTTTATACGAGCTAATCGATCCTTCGAGGCGCTTGGAAATTCTATTCAGATCTAA

Protein sequence

MASVFLYHVVGDLTVGKPEMVEFYETETIETAIRVIRESTECGIPIWMRKSHGIIENAEMKQRRFVGILSSLDIVAFLARTENQKDQDRAMKTPVSEAVVPNHSLLRQVDPATRLIDALEMMKQGVRRLLIRKSVVWKGMSKRFSVLYNGKWLKNVDTSVGSSNNLNVNANHPSSSSTSTCHDKFCCLSREDVIRFLIGCLGALAPLPLSSISTLGVINPNYCSIDALTPAIDITHKLPDDPTAVAVVENMHDNQYRIIGEISASKLWKCNYLAAAWVLANLSAGQFVMGAEDNMASRIVPDLSTNANGCENDRANAGGEKRVRKFSSRSIGFKPSSPALRISRSMYRGRSAPLTCRVTSSLAAVMAQMLSHKASHVWVTEDENDEILVGVVGYADILAAVTKQPRSFIRANRSFEALGNSIQI

Homology

[Close]

BLAST of CmaCh05G007520 vs. ExPASy Swiss-Prot
Match: Q8GZA4 (CBS domain-containing protein CBSX6 OS=Arabidopsis thaliana OX=3702 GN=CBSX6 PE=1 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.8e-152
Identity = 289/430 (67.21%), Postives = 348/430 (80.93%), Query Frame = 0


Query: 1   MASVFLYHVVGDLTVGKPEMVEFYETETIETAIRVIRESTECGIPIWMRKS----HGIIE 60
           MASVFLYHVVGDLTVGKPEMVEFYETET+E+AIR I ESTECGIP+W +++     G +E
Sbjct: 1   MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWRKRTTPSLPGFVE 60

Query: 61  NAEMKQRRFVGILSSLDIVAFLARTENQKDQDRAMKTPVSEAVVPNHSLLRQVDPATRLI 120
           N+EM+Q+RFVGIL+SLDIVAFLA+TE  + +++AMK PVSE V P+++LL+QVDP TRLI
Sbjct: 61  NSEMRQQRFVGILNSLDIVAFLAKTECLQ-EEKAMKIPVSEVVSPDNTLLKQVDPGTRLI 120

Query: 121 DALEMMKQGVRRLLIRKSVVWKGMSKRFSVLYNGKWLKNVDTSVGSSNNLNVNANHPSSS 180
           DALEMMKQGVRRLL+ KSVVW+GMSKRFS+LYNGKWLKN + S  SS     + N P++S
Sbjct: 121 DALEMMKQGVRRLLVPKSVVWRGMSKRFSILYNGKWLKNSENSSSSSGLSADSTNRPTTS 180

Query: 181 STSTCHDKFCCLSREDVIRFLIGCLGALAPLPLSSISTLGVINPNYCSIDALTPAIDITH 240
            TS+  DKFCCLSREDVIRFLIG LGALAPLPL+SISTLG+IN NY  I+A  PAI+ T 
Sbjct: 181 MTSS-RDKFCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQNYNFIEASLPAIEATR 240

Query: 241 KLPDDPTAVAVVENM-HDNQYRIIGEISASKLWKCNYLAAAWVLANLSAGQFVMGAEDNM 300
           +   DP+A+AV+E   ++ Q++IIGEISASKLWKC+YLAAAW LANL AGQFVMG EDNM
Sbjct: 241 RPLCDPSAIAVLEQTENEQQFKIIGEISASKLWKCDYLAAAWALANLYAGQFVMGVEDNM 300

Query: 301 ASRIVPD-LSTNANGCENDRANAGGEKRVRKFSSRSIGFKPSSPA-LRISRSMYRGRSAP 360
           +SR   D L T+  G E +    G     +KFSSRSIGF P+SP  L I RSMYRGRSAP
Sbjct: 301 SSRSFSDFLQTSFPGGEQN----GTATNAKKFSSRSIGFNPTSPTRLSIGRSMYRGRSAP 360

Query: 361 LTCRVTSSLAAVMAQMLSHKASHVWVTEDENDEILVGVVGYADILAAVTKQPRSFIRANR 420
           LTC+ +SSLAAVMAQMLSH+A+HVWVTE ++D++LVGVVGY +IL AVTKQP +F+ +NR
Sbjct: 361 LTCKTSSSLAAVMAQMLSHRATHVWVTEADSDDVLVGVVGYGEILTAVTKQPSAFVPSNR 420

Query: 421 SFEALGNSIQ 424
           S+E  GN  Q
Sbjct: 421 SYEGFGNENQ 424

[Close]

BLAST of CmaCh05G007520 vs. ExPASy Swiss-Prot
Match: Q84WQ5 (CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana OX=3702 GN=CBSX5 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 7.3e-21
Identity = 114/427 (26.70%), Postives = 204/427 (47.78%), Query Frame = 0


Query: 1   MASVFLYHVVGDLTVGKPEM-VEFYETETIETAIRVIRESTECGIPIWMRKSHGIIENAE 60
           MA   L + V DL +GKP +      + ++  AI  ++ S +  + +W   +H    N E
Sbjct: 1   MALSLLSYNVSDLCLGKPPLRCLSSSSSSVSDAIAALKSSEDTFLSVW-NCNHDDDNNTE 60

Query: 61  MKQRRFVGILSSLDIVAFLARTENQKDQDR---AMKTPVSEAVVPNHSLLRQVDPATRLI 120
            +    +G +S  D++  L+     KD D    A+ + VS  +    S++  V P+  LI
Sbjct: 61  CE---CLGKISMADVICHLS-----KDHDHSLCALNSSVSVLLPKTRSIVLHVQPSCSLI 120

Query: 121 DALEMMKQGVRRLLIRKSVVWKGMSKRFSVLYNGKWLKNVDTSVGSSNNLNVNANHPSSS 180
           +A++++ +G + L++   +  K  +K+                    +N NV+     ++
Sbjct: 121 EAIDLIIKGAQNLIV--PIHTKPYTKK------------------KQHNDNVSV----TT 180

Query: 181 STSTCHDKFCCLSREDVIRFLIGCLGALAPLPLSSISTLGVINPNY--CSIDALTPAIDI 240
           +T +   +FC +++ED+I+FL+G + A +PLP  S+S LGVIN  +   ++D  + A  +
Sbjct: 181 TTHSNGQRFCWITQEDIIQFLLGFIAAFSPLPAMSLSDLGVINSTHTVVAVDYHSSASAV 240

Query: 241 THKLPDD---PTAVAVVENMHDNQY-RIIGEISASKLWKCNYLAAAWVLANLSAGQ---F 300
              + +     T+VAVV+   D+ +  +IGEIS   L  C+  AAA  +A LSAG    +
Sbjct: 241 VSAVSNALAVQTSVAVVDGEGDDPFTSLIGEISPMTLTCCDETAAA-AVATLSAGDLMAY 300

Query: 301 VMGA----------EDNMASRIVPDLSTNANGCENDRANAG-GEKRVRKFSSRSIGFKPS 360
           + GA           + +  + +  L +  +   +   ++G   +      + S G   S
Sbjct: 301 IDGANPPESLVQIVRNRLEDKGLIGLMSLFDSLSSYSTSSGYSSEEEAPVRTTSYGRSMS 360

Query: 361 SPALRISRSMYRGRSAPLTCRVTSSLAAVMAQMLSHKASHVWVTEDENDEILVGVVGYAD 404
           S A R++R     +S  + C   SSL AVM Q ++H+ ++ WV   E D   VG+V + D
Sbjct: 361 SSA-RMAR-----KSEAIVCNPKSSLMAVMIQAVAHRVNYAWVV--EKDGCFVGMVTFVD 385

[Close]

BLAST of CmaCh05G007520 vs. ExPASy Swiss-Prot
Match: Q8GXI9 (SNF1-related protein kinase regulatory subunit gamma-like PV42b OS=Arabidopsis thaliana OX=3702 GN=PV42B PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-06
Identity = 32/134 (23.88%), Postives = 69/134 (51.49%), Query Frame = 0


Query: 10  VGDLTVGKPEMVEFYETETIETAIRVIRESTECGIPI------WMRKSHGIIENAEMK-- 69
           V DL + K  +VE  +  T+  A+  +  +    +P+      W+     +I   + +  
Sbjct: 12  VKDLMIDKRRLVEVPDNATLGDALNTMVANRVRAVPVAAKPGQWLGAGGSMIVELDKQSG 71

Query: 70  --QRRFVGILSSLDIVAFLARTENQKDQDRAMKTPVSEAV--VPNHSLLRQVDPATRLID 129
             +++++G+++ LD+VA +A  + +   D+ M  PVS  +   P    L  ++P T ++D
Sbjct: 72  SARKQYIGMVTMLDVVAHIAGDDGESGLDKKMAAPVSSIIGHCPEGLSLWSLNPNTSIMD 131

Query: 130 ALEMMKQGVRRLLI 132
            +EM+ +G+ R+L+
Sbjct: 132 CMEMLSKGIHRVLV 145

[Close]

BLAST of CmaCh05G007520 vs. TAIR 10
Match: AT1G65320.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 540.4 bits (1391), Expect = 1.3e-153
Identity = 289/430 (67.21%), Postives = 348/430 (80.93%), Query Frame = 0


Query: 1   MASVFLYHVVGDLTVGKPEMVEFYETETIETAIRVIRESTECGIPIWMRKS----HGIIE 60
           MASVFLYHVVGDLTVGKPEMVEFYETET+E+AIR I ESTECGIP+W +++     G +E
Sbjct: 1   MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWRKRTTPSLPGFVE 60

Query: 61  NAEMKQRRFVGILSSLDIVAFLARTENQKDQDRAMKTPVSEAVVPNHSLLRQVDPATRLI 120
           N+EM+Q+RFVGIL+SLDIVAFLA+TE  + +++AMK PVSE V P+++LL+QVDP TRLI
Sbjct: 61  NSEMRQQRFVGILNSLDIVAFLAKTECLQ-EEKAMKIPVSEVVSPDNTLLKQVDPGTRLI 120

Query: 121 DALEMMKQGVRRLLIRKSVVWKGMSKRFSVLYNGKWLKNVDTSVGSSNNLNVNANHPSSS 180
           DALEMMKQGVRRLL+ KSVVW+GMSKRFS+LYNGKWLKN + S  SS     + N P++S
Sbjct: 121 DALEMMKQGVRRLLVPKSVVWRGMSKRFSILYNGKWLKNSENSSSSSGLSADSTNRPTTS 180

Query: 181 STSTCHDKFCCLSREDVIRFLIGCLGALAPLPLSSISTLGVINPNYCSIDALTPAIDITH 240
            TS+  DKFCCLSREDVIRFLIG LGALAPLPL+SISTLG+IN NY  I+A  PAI+ T 
Sbjct: 181 MTSS-RDKFCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQNYNFIEASLPAIEATR 240

Query: 241 KLPDDPTAVAVVENM-HDNQYRIIGEISASKLWKCNYLAAAWVLANLSAGQFVMGAEDNM 300
           +   DP+A+AV+E   ++ Q++IIGEISASKLWKC+YLAAAW LANL AGQFVMG EDNM
Sbjct: 241 RPLCDPSAIAVLEQTENEQQFKIIGEISASKLWKCDYLAAAWALANLYAGQFVMGVEDNM 300

Query: 301 ASRIVPD-LSTNANGCENDRANAGGEKRVRKFSSRSIGFKPSSPA-LRISRSMYRGRSAP 360
           +SR   D L T+  G E +    G     +KFSSRSIGF P+SP  L I RSMYRGRSAP
Sbjct: 301 SSRSFSDFLQTSFPGGEQN----GTATNAKKFSSRSIGFNPTSPTRLSIGRSMYRGRSAP 360

Query: 361 LTCRVTSSLAAVMAQMLSHKASHVWVTEDENDEILVGVVGYADILAAVTKQPRSFIRANR 420
           LTC+ +SSLAAVMAQMLSH+A+HVWVTE ++D++LVGVVGY +IL AVTKQP +F+ +NR
Sbjct: 361 LTCKTSSSLAAVMAQMLSHRATHVWVTEADSDDVLVGVVGYGEILTAVTKQPSAFVPSNR 420

Query: 421 SFEALGNSIQ 424
           S+E  GN  Q
Sbjct: 421 SYEGFGNENQ 424

[Close]

BLAST of CmaCh05G007520 vs. TAIR 10
Match: AT5G53750.1 (CBS domain-containing protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-24
Identity = 116/431 (26.91%), Postives = 202/431 (46.87%), Query Frame = 0


Query: 1   MASVFLYHVVGDLTVGKPEM-VEFYETETIETAIRVIRESTECGIPIWMRKSHGIIENAE 60
           MA   L H + DL +GKP +      T T+  AI  ++ S E  + +W        ++ +
Sbjct: 1   MALTLLSHELSDLCIGKPPLRCLSVATATVADAIAALKSSDEPFLTVWSCNHDEKTDDND 60

Query: 61  MKQRRFVGILSSLDIVAFLARTENQ-KDQDRAMKTPVSEAVVPNHSLLRQVDPATRLIDA 120
             +   +G +   D++ +L++ +N       A    VS  +  + +L+  V  +  LI+A
Sbjct: 61  --KCECLGKICMADVICYLSKFDNNVLSLSSAFDASVSVLLPKSRALVVHVQSSCSLIEA 120

Query: 121 LEMMKQGVRRLLIRKSVVWKGMSKRFSVLYNGKWLK-NVDTSVGSSNNLNVNANHPSSSS 180
           ++++ +G + L++   +  K ++KR       K LK NV  S+              +++
Sbjct: 121 IDLIIKGAQNLIV--PIHTKSITKR---RQQQKLLKRNVVVSL--------------TNA 180

Query: 181 TSTCHD---KFCCLSREDVIRFLIGCLGALAPLPLSSISTLGVINPNYCSI-----DALT 240
           TST H    +FC +++ED+IRFL+  +   +PLP  SIS LGVIN  +  +      +  
Sbjct: 181 TSTTHKNSREFCWITQEDIIRFLLDSISVFSPLPSLSISDLGVINSTHTILAVDYYSSAA 240

Query: 241 PAIDITHKLPDDPTAVAVVE---NMHDNQYRIIGEISASKLWKCNYLAAAWVLANLSAGQ 300
            A+    +   D  +VAVV    +  D    +IGEIS   L  C+  A A  +A LSAG 
Sbjct: 241 SAVSAISRAILDNVSVAVVGKGCDQEDPCMVLIGEISPMTLACCDETAVA-AVATLSAGD 300

Query: 301 FV-----MGAEDNMASRI--------------VPDLSTNANGCENDRANAGGEKRVRKFS 360
            +      G  +++   +              + D  + ++G  +D  +  G+ R+    
Sbjct: 301 LMSYIDGSGPPESLVGVVRNRLEDKGMVGLISLIDSLSLSSGSSSDEESPAGKTRMTSSY 360

Query: 361 SRSIGFKPSSPALRISRSMYRGRSAPLTCRVTSSLAAVMAQMLSHKASHVWVTEDENDEI 399
            RS+     S A R++R     +S  + C   SSL AVM Q ++H+ S+VWV ++  D  
Sbjct: 361 GRSV-----SSAARMAR-----KSVAIVCNRKSSLMAVMIQAIAHRVSYVWVIDE--DGC 397

[Close]

BLAST of CmaCh05G007520 vs. TAIR 10
Match: AT4G27460.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 103.2 bits (256), Expect = 5.2e-22
Identity = 114/427 (26.70%), Postives = 204/427 (47.78%), Query Frame = 0


Query: 1   MASVFLYHVVGDLTVGKPEM-VEFYETETIETAIRVIRESTECGIPIWMRKSHGIIENAE 60
           MA   L + V DL +GKP +      + ++  AI  ++ S +  + +W   +H    N E
Sbjct: 1   MALSLLSYNVSDLCLGKPPLRCLSSSSSSVSDAIAALKSSEDTFLSVW-NCNHDDDNNTE 60

Query: 61  MKQRRFVGILSSLDIVAFLARTENQKDQDR---AMKTPVSEAVVPNHSLLRQVDPATRLI 120
            +    +G +S  D++  L+     KD D    A+ + VS  +    S++  V P+  LI
Sbjct: 61  CE---CLGKISMADVICHLS-----KDHDHSLCALNSSVSVLLPKTRSIVLHVQPSCSLI 120

Query: 121 DALEMMKQGVRRLLIRKSVVWKGMSKRFSVLYNGKWLKNVDTSVGSSNNLNVNANHPSSS 180
           +A++++ +G + L++   +  K  +K+                    +N NV+     ++
Sbjct: 121 EAIDLIIKGAQNLIV--PIHTKPYTKK------------------KQHNDNVSV----TT 180

Query: 181 STSTCHDKFCCLSREDVIRFLIGCLGALAPLPLSSISTLGVINPNY--CSIDALTPAIDI 240
           +T +   +FC +++ED+I+FL+G + A +PLP  S+S LGVIN  +   ++D  + A  +
Sbjct: 181 TTHSNGQRFCWITQEDIIQFLLGFIAAFSPLPAMSLSDLGVINSTHTVVAVDYHSSASAV 240

Query: 241 THKLPDD---PTAVAVVENMHDNQY-RIIGEISASKLWKCNYLAAAWVLANLSAGQ---F 300
              + +     T+VAVV+   D+ +  +IGEIS   L  C+  AAA  +A LSAG    +
Sbjct: 241 VSAVSNALAVQTSVAVVDGEGDDPFTSLIGEISPMTLTCCDETAAA-AVATLSAGDLMAY 300

Query: 301 VMGA----------EDNMASRIVPDLSTNANGCENDRANAG-GEKRVRKFSSRSIGFKPS 360
           + GA           + +  + +  L +  +   +   ++G   +      + S G   S
Sbjct: 301 IDGANPPESLVQIVRNRLEDKGLIGLMSLFDSLSSYSTSSGYSSEEEAPVRTTSYGRSMS 360

Query: 361 SPALRISRSMYRGRSAPLTCRVTSSLAAVMAQMLSHKASHVWVTEDENDEILVGVVGYAD 404
           S A R++R     +S  + C   SSL AVM Q ++H+ ++ WV   E D   VG+V + D
Sbjct: 361 SSA-RMAR-----KSEAIVCNPKSSLMAVMIQAVAHRVNYAWVV--EKDGCFVGMVTFVD 385

[Close]

BLAST of CmaCh05G007520 vs. TAIR 10
Match: AT1G80090.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-05
Identity = 21/72 (29.17%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 62  QRRFVGILSSLDIVAFLARTENQKDQDRAMKTPVSEAV--VPNHSLLRQVDPATRLIDAL 121
           +++++G+++ LD+VA +A  + +   D+ M  PVS  +   P    L  ++P T ++D +
Sbjct: 119 RKQYIGMVTMLDVVAHIAGDDGESGLDKKMAAPVSSIIGHCPEGLSLWSLNPNTSIMDCM 178

Query: 122 EMMKQGVRRLLI 132
           EM+ +G+ R+L+
Sbjct: 179 EMLSKGIHRVLV 190

The following BLAST results are available for this feature:

BLAST of CmaCh05G007520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZA4	1.8e-152	67.21	CBS domain-containing protein CBSX6 OS=Arabidopsis thaliana OX=3702 GN=CBSX6 PE=...	[more]
Q84WQ5	7.3e-21	26.70	CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana OX=3702 GN=CBSX5 PE=...	[more]
Q8GXI9	1.0e-06	23.88	SNF1-related protein kinase regulatory subunit gamma-like PV42b OS=Arabidopsis t...	[more]

BLAST of CmaCh05G007520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65320.1	1.3e-153	67.21	Cystathionine beta-synthase (CBS) family protein	[more]
AT5G53750.1	1.9e-24	26.91	CBS domain-containing protein	[more]
AT4G27460.1	5.2e-22	26.70	Cystathionine beta-synthase (CBS) family protein	[more]
AT1G80090.1	1.5e-05	29.17	Cystathionine beta-synthase (CBS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 352..402 e-value: 0.48 score: 19.5 coord: 19..79 e-value: 18.0 score: 7.4
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 352..401 e-value: 1.2E-5 score: 25.6
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 346..408 score: 10.351628
None	No IPR available	GENE3D	3.10.580.10		coord: 317..407 e-value: 4.1E-6 score: 28.5 coord: 1..135 e-value: 2.0E-7 score: 32.8
None	No IPR available	PANTHER	PTHR13780	AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT	coord: 1..410
None	No IPR available	PANTHER	PTHR13780:SF46	CBS DOMAIN-CONTAINING PROTEIN CBSX6	coord: 1..410
None	No IPR available	CDD	cd02205	CBS_pair_SF	coord: 23..131 e-value: 1.47639E-7 score: 47.6244
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 341..405
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 5..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G007520.1	CmaCh05G007520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042149	cellular response to glucose starvation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031588	nucleotide-activated protein kinase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016208	AMP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0019887	protein kinase regulator activity