CmaCh05G006930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G006930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Lysine--tRNA ligase
Location	Cma_Chr05: 3618174 .. 3640070 (+)
RNA-Seq Expression	CmaCh05G006930
Synteny	CmaCh05G006930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGTTCGGTTGTTCAGAGCTCGGGCGGAGAAGGCGAGAAAAAAGTTTGCTTCTGCATTCTTCAGAGCTCTGAATCTCCACCATTTTCCTTTCCTTCTCAAAGGGAGAAACCGTCTTGGCAATGGATTCCGTGTTCGTTAGAGCCTACCGAAGTCATGTTGGTATGCTGTTTGTTTTTCTTTCAATCTTAGTGGTTTGAGACTGTTTCGGCTCAGTTCAATCTTAGTTTTCTCCGCCGGAAGTTCTGCATTTTGTTTTTAGCTTTTTTTTCTTTCTTGTTGATTGGTGTGTTTTTGTTTTCGAGTCTGTTTTTCTTTTTTGATGCTTCGTTTTCATTTACACTTGAGGAGTTACTCGATGATGTTCTCGCGATTCTCATCCTATTGCTTGAGTGAAGCTGATTTGAGTCTGGTTTTGTCTGATTCGCTGTTTCTGTTCAGTAGGTGGGATTGGAAGCGGCTGGACAAATCGTGACGTCAACAATGTTTGGCTTCCAAGTAAGACCAATTCGTTTTTGAATCCTTATTTTCTTTGCAACTATCGCTTACGATTCTCGTCTTCTCTGGCATCTTTTAATTCGTCAATCGCACACGCAGGATTCGTGTAATTTTTGCTTGATTTTTAAATTTCATGTTTGGTACTGCTATTGTCAAAAGACTGTTGTTGATTGTGCAAGTTTAGATGAATTGAACTAGCGGAAGAGATTATCCGGGCGGCGGGTTGTCATGTAAGCTTGGAGGGGCTATTTGAGAGTTGATGAATTTTAAAATTAAACAATGATTTCAGTCGTAATGAAACACTTAATGTTTTTTAGCCAGATATTGGGTTGTAATTTTAAAAATTTAATTCGGGAACTACGATATAAAATTACCTGCAAATAGCCTTTAAGTCTGAAGACAGCATAAACGCCTGTGTCGATTAAAACTCTGAACTTGCACTTTACTTCACAGCAAAGTCATTTTAGAACAGAAATTGATACCCATTTTATTTTTTAAAATTATGCTTGTTTTCTCACCATTTTTTAAGTATGTTTTTCACATTCCCTTGAAAATACATTGAATTCTGAGCCAAATTTCACAAACCAAATCAAGTTATTAAATAATACTTTTCTTATTTTTAAAATTTTGACAGATCGTTTAGAATGCTTTTAAAATATAGGTGATAAAGTTAGGAAGCTAGACGCTGAAGTATTGGTTATAAGCTTATTTTCAAAATCAGAAACCCATAAACAACATGTTATCGGAACCTAAGATTTCAATTCTAAAAATTATTATTATTATTATTATTTTGTTAACATTGAGAATATTTCTATGCAAAAGAAGATAAAATTATGGTATCTTAATCAATAGTTCAATATTAAGTTAACTTTCAATAATATACAAATATATCTATATCTATGTATATATTGGAATAAGAAATAGTCCTTCCAGGGTGAAAGAGTATACGAACGTGTACAAAAAGACAAGCTCACAAAAGGAGTTCTCAACCAACTACAAGAATGGACTCCAGTCCAAAAGAATAACACTCCGCTGATTATTACAAAAAAATAGGTTAACAAATAGATAGCTATTGTCGAATATCCCTGGAAAAAGGTTGTACACACGTGTGAATCTGCGTCTATTTCTATTACATATACCTCTTGTGTGTGCACGTGTCATAAGAGTGGGAGGAAGGTGCGGATCAATTTTAAGGAAGTGCCTTCATGTTTATTGAGTAGATTTAGAAATCTGAAGCGTTGAGTTTGTTTTCTATATGATACTTTCGACAGTTGTTCAACATGGTCATGTCAGATGCTGATGAACACATGTTGGTTGATTATTTGGGCACTTGTTCAACATTTTTATGGCTCCTTCCTACACCTTACATGTATAATCAAAGCACAAGTTTTTTAGTTTTTCTCCTTCCTATACATTGTTCTAGCCGTTGAATCATTTCTCCCATCCGGCAATCGTCGTGGATAATTCTAGGATGAGCATTTTTACAGTCTCTATGAGCCTGCACCCTTAGTTTGGTTTAACAGGCGCACTGCTTGATATTTGTTGGATGTCTGTTGAATACTCACTGAATATGTGTTCTAGTTTGATACTTTAAGCACTTGTTCAACATGTGTCAGATGCTGACGAACTCATGTTGGATGATTATTGGACACTTGCTAAAGTGTTCAATCATTACTTATTAGCTTATGTTTGAAACTAGTAATCGATAAAGGAAAATAATAAAATTTGAGTGAAAATATTTAACGTTTTTAACCATATATTTGAAGACTTAATTTTACTACTAATGAAATTTACCAAGGAACATAGTTGACTTACATTTCTTTCCTAGGATAGGTTGAATCATTATAAAAATTTAATCCTTTGACTTGTGCTATAAGATGTTAAGATCATGAGAAATATACAATTCATTTCTTCCATTTCTGGAAAGATATATTTTTTTTCCTTAGCTTATTTTACACATTTAAATGTCATCATAAATTTGAACAAATTTATGTGAAAATCATTGAAATGTGTGGATATTCAAATATATCTGAATTAATGTATAGTCTGATAACATATCCTAGTCTTTTTGAAAATGATGTATTGTTGTATTTCACTGGGTGACTTTATCCTCTGTTTATGTTTATGTTTTTTAGTGTAGCCTCTATAAATATAGCTCCTTGTTTTGGACGAGATTATGGGAAGATGGGGTGCATGTGGTTTCCTAGTGTACCGATAATGGGGTTGTTTAGGTCACTTCTCGTTCATGTGTTATCTTTTAGCCTTTGCAGGCATGCAAGTGATGTTGTGCGAGGGTGGATATTTATTGGGTTGAACCTTGGTGTGAAAAGACTATAGTTATTTCTGCCTTTGTAGCTTATCTACTCTCATTGCCGGTTGGAAGAACTTTTTTTTTTGTAATTCCTTTCTCAATGATAAGAAAATATTCTTTCTTGAAGAGATGAATACAAGGGGAGTCTAAAAGGCAATTATCAGGGAAACAAAATAGGAACGAAAAATCACGTACAAGAGAAAAAAGACCAAGCTCGATCATTCATTTATCAATTAGGAGCTAGTTACAAATAGAGAAGTAAATAACAAAACACAGAAATTGTTGTACAATATGATTTGACACCTTTTGTTAGGAACGTCTTTTCCCCTTTTGTAAGTTTGTCTCATCAATGAAATCTAATGAATCCGTTTCTTTTGAAAAGAAATAAAGAAAACAAGATGACAGGAGAATTGTTTCCGTAATAGTAATAGTATACAACATACAAAGTCTAGGTGGCATTCAAACCACTATCTTTTGGAAGTTCAAATACTACTTTGGCCCTGCACTTTCAAAATGTTCATTGCGGTTCCTACACATTCAAGTTTGGTTTAGTTTGGTCCCTATTCTTTTAATATGTCCATTTTGGTCCCTGTAATTTATAAAAGTAACCATTTGTTTTTTTTTTTTGTCTCTAATACATCGATAGTTTCTTATAAAAAAAAAAAAGAAGAAGAAAAATAATAAAAGTTACTGAAGTTTGACTCTGCAACTGTGCCTCTGTCCATTTCATTCTTGCGTTGTTTTTCTAGTAGAGAGGTGGATGGATGTGCCCTTTTACCATCCATTTTGAGGGTTTGGTGTAGTCCCATGTGATTCTCAGACAGACTTGTATTCGTCTGTGAGATTCTCCCATGTGACTAGTTTTCAGCAAGGTCTTGTGGAAAGATCAAATGAGAGCTCTCTAAGAACTTTGATTAAAACCAATCCTTAAGATGTTGAAGGAAATTTTTTCCATAATTCAAGACCACAAGCTTCAATAAGAGACGCAAATTTTAGTCTGAAAGAATATTTGGTAGTTTCTGTGGTCATAACTTTAACTATCAAATCTGGTCACCGGATGACTAAAGTCTGGTTTTGTGAGAGTTATAGATAGAGTGAAAATAGAAGGATGTTTAATGATCCTAAAAGAAGCATCCAAGTGCTGTGGGAATTTATTGTTTGTTTTTTCTTCCTGGAGTCAGAACTATTTCTTGATATTTTTAAAGCGGGTGACCTTCGTTAGGTCTTCTTTTTGTAAAATTCATATAATTGGGATGTACTTCATGAAGAGATTCAGAAAAGAAGAAGGTTGGTTCCCCCCCCCCCCCATTTTCCTTTCTTTGATATGTGCAATTATGGCTCTTCTGTTGTCTTATGATTTGAAAACGTAGAATAATTAAGGAAAGAGTTCAAGAATGCTTGCTTATCATTCACATGTCCCAATTGAAGGTCCAAGGCCTGGAGCACTGAAGATTTCTAAGAGGCCCAGTTGGGTGGAGTCTGAATCTAAATCACATCATGTTGAATGTGTCTTTAGAAGACATCGGGAAGGATACACCTTCTGTCAGAAGAAAGACAACCGAATTCAAATTAGAAATGCAGCCTCTAATCAGCCTTTTGAATCCGAATCGGAAGTTTTACATTCCAAAAATTATGGTGACTCTGTAAAGAGTTTCTTGGATGCTTTCTATAGGTTTTCACGGCCGCACACAGTTATTGGTACAGTTACGTTTAAAAACTCATGTCCTTTTAGGTCAATAACTTTTTGTTTCATTTCATTCTCTGTGGGAAAATTATTTGATGTAGCCGCCACATTGTGCCTGCCACCATCTAAAGCACTGAAAAATTACTCTCTGTGAAATATATTATGTATCTTCAGCTTATGCTTTCCTTTCATGCTTGCAGGCATTGAGCATTGTATCAGTTTCTCTACTAGCTGTTGAGAAACTATCAGACTTGTCACCATTATTTTTAACTGGNTTTTTGGAGGTGATTTTTCAAACAAGATTTATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTTTTGTAAATATATAACACATTTGCAAAAAATTTCCAGGCTATAGTTGCTGCCCTCTTCATGAATATTTATATTGTAGGTCTGAACCAATTATTTGACATCGAAATAGACAAGGTACTTCTTTTGTATTCTTTTTCCCGTAGCAGCATATTAAATTAGGTCTGCTGTCATAATTTTTAGCGAACTTGGAAGAGTATCCCATGAGTAAATTTTTATCAGAATGATGTAGCAGTCTTGGTTTTGGACCTATATTTACATAGGCATTTCTGGCAGGGTATCATGCCTATTTGTGTAGTGATCTCCTTATTTGGTCAATACCATAATCTTTTTTAATTTACCAGTGTGAGCATTTCAACCATATATATCTTCTAAAAATGTGTGGTAGCACCATGAGTGTGCAGAATAAGCTATCATATGATCTGACCTTCACTTAACAACATTTGAATAATAATAAAAGCGGAGCTTGCAATATTCTTTCTTGTAGCCATCAAAGAAGACCTTAATGATTCCTATGTGTTTCCATTGCAGATTAACAAGCCATATCTTCCATTAGCATCGGGAGAATATTCTTTTGGAACTGGCGTTGCAATTGTCTTCACGTTTTCTATCCTGGTATTACTTTTTATGTGCAACATCATTCGCAAGACCCTTTGTTAGAATTTTTATTTTAGTATCTTTTGGGGTCTATTTGAAGCAATTTAATATGTAGAAAATATCTGCGTACTATTTTTTTTTTTTTTTGGACAAAATAACCTTTTGGTCCTTAGGTTTTGAGTTTAGTTTCTGTTTGGTCTCCATGTTTTAAAATGTTGTACTTTTATTCTTGAGTTTTGATTTTAATTTCTATTGGGTCCCTACACTTTTCTAGACCATTTTAAAATTTTCATTTCATTAATTATAATCTTATAATTTAATATTTTAAGATATATTAAAATATGGAGGGAGAAATACGTATATATTGAAAAGTGGAGTGCAAAATGGGTAGGTAAGTTTCTCTCTTATAACCTTTTATATGTATATAGAGTATAGATACTATTTCTAGTTAGGAATATCTGTAGATGCATATAACTTTTATTATAAGCTTTTAATAAATATTACTTCTTATGGCTATTTCCATTTGTGTATCTGAACTACGTATAATGGGCGCCAAGATTCCATTCTTAAACTACTTTACTCTCCCTATGTTTTTGTACAGAGTTTTTGGCTAGGATGGGTTGTTCGTTCATGGCCATTGTTTTGGGCACTTTTGATCAGCTTTATTCTTGGGACTGCTTATTCCATTGATGTGAGTGGGTTCCTTTATCTTATCATTTATTTTCAGATTCTTATCTACCAAAAAGCCAAATCAAGTATGTCCATCTTGTCTAAACTGGCTACAGTATCCTTTTATTGGAGTGTTGAAACCACTCTTTTCATAATTAAATGTGAGATAACATTAATGATTATTGCACAGGGTCCAAATAGGTAATCAATTTTCACATTCTTTTCCTTTTCATGACCACTGCTTCCTTTGTCTCTCTTTAACCCAATATAGTTGTTAGATAGGAGTTGCATTTGCAAAACTAAAGAAGCAAGTAAACTATCGTCTTCCTTTCTTTGTCAGTGCTACTGTCACTTGAGGTTGGGGGGGTGTAAAGAAAGTAGGTTGGTAGGCTAGATAAGACACCTTTACAATGGGTTGACAGGACCTATCTTTAGAAGGGAAAATTTTTTTCCATTTCCAAACGAAATATGAACGTTTAGAATGGTTCTTGTCCAGAAAAGGTTGAAATGTTTGTATGGTTAGCATGTTTAGATAGTATAAAGACTGCTGAGAAAGTGCCAAAAAGATGTGCCTTCTGGAGTTTAAGTCCCGTTCGGTGTTTGCTGTTCTGTTTGGATACTAAATATAGGTCCTATCAATCTTTTTCTTATTCTTAATGCAGAGGAGTGTAGAGTTTCTTACTACAAGCGACAGGTTCAGGTTTTTTCTGTGAATGAAGAGTGAGGCCTTGGGGGAGGTTCGGTCCATAGCTAGCTCCAATGACCCCCCTTGGGTTTCAGTGGCTAGAGATTTTTGTAGTTATCCTTTGTTTCTTTTTCTTAATAGTTGGAGGTCGTTCTTGTGATTTTTCGTTGGCTCGTTTTGTTCTAGGCTGACTTTTTGCATTGCCCCTGGTGTATCCTTTCTATTTTCTAAATCAAAGTATAGTTCTTCATAAAAATAAGAACAAAAAGGTTGAAATGTGAAACATTTGTTATGTGAGATACTTCAAGGTTTCTCTAGGTCCCATCTTCCAAACTTTCTTCTTTCATCTTCAGTAGTTCTTCCCCATTCATTGGCTATCAAAATTGGACCAACAATTTTTCTATCACCTACAAATCCATTCTAGAAGACAGTAAACACTTTTTGCAATCTCTCTACGAAGCAATAATGTTGTTTACCAAGTTATATCTTGGTGTAAACCATCTAATATTTTTACTTCTTATAATTATACCTCTCTCATTGTCAACATCATGGATTTTATATCCCTTCTGTAAATTTCAATCATCAATGAAATTATCTCTGGTCCATAGAAAATAAAATAAAATAAATAAATTCTCTTCTATTTTTCTCACGATAATTTTTTTCGTACACGGTAGATTTTTTATAGAAAGAATTATTTACAAAATTTTGAGTTGATTTTGAATGGAATTTTGTGAAAAATAATTTAAATGATTGATTGAGGATCTAAATTGACTCCCTGGAACTTTTGAGTCATTTTTTTTCTTGTTCACCATTCTGAAATTCTACCTCCTTAATTGTCGATTGATTTTGATGTTAATATTGTGATTCAGGATGATGTAAACTAAATATTTTTGTGAGCATAGTTAAGTAATTGAAAGAAAAATTGATTTTGATTAGGAGCTTGATGGTCTTTTAACTTTTCTGTTATTTCAGCTGCCACTGTTGAGATGGAAGAGATTTGCTGTGGTAGCCGCTATGTGCATTCTAGCTGTTCGAGCCGTGATTGTTCAACTTGCTTTTTTCCTACACATGCAGGTTAAAAGTACCTCTTATTTTGAATAAATAATGATTGTTATCCATGCTCTAGTCATGTTGTGGCATGTTAATTTTTTTTTTAAATGTTTATTATATAATAATATTTTATGAGGAATATCAATATGCATGTATGTTGACTTCGTGCTCATAGGTGTATTTCTATGCACAACTGTAATTAATTTTTCTAGATTGGAAGCCAGGCCACTGATGTAAGTGTAGACGTGAGTTTGAATATGCATGTAGAAATCTAAATAAGACGGACGAATTGGGGACACAAAAATCATGTTCAATAAACAGAAAAGTTGGTGGGATCAAAAGATTAGATACTATTTGAACGGGGGTAGATAGATTGATGGCAATTTTTTACTTTTTTTCAGAGAAACAACTTCTCATTAGGAAAGAATTAAAAATTCAAAGGATACAAACTCCCAAAAGGAGTGAAAAGGAAAAATTAAAAAAAATATAAAGATTACCATATAAAAACAACCATGAACAAAAACTTTTTATAAACCTAAAAATACACTCCCCTATAAAAATGACTATTATTTACTTTTGCTACCATTTTGAGAACTTGAGAAAACTAGGGAGGGATTTCCAAACTGCTTTTTTAGCTTTTACTTTGTACTTCTTAGAAATGACGTAGTAAGCATCATTGAGCTCTTGTTTGTATTGGAGAAATCAGCTCTTTATATTCTACTCTGCAAAGAACCATTCCATCTCCCCTACTTTCTTCTATAGAGTTAATAAGAATTTGAAGGATCCCATGCGTCGATGCCTTTGACTTGCGATGTTTCGACTTCCGTAATTTCAGATTCAACTGTTATATTTGTTCCCAATGTGGTCTGAAAAGCTTCAAGAGCCATTCTTTTTGGACACTCAGAAACTTGATGAGTCACCTTACATATGAAGCAAGATGAGGGTCCTTGGTTGTAATTATTCTATTGATACGACCCTCACCATGAGATTCCACCTCTTTATTGGAAGGGCTCACAAGCTCCCCCTCCAGTTCCAAATTTGTCTCCTCCTCAACCCTTGAGAGAGTTGGATCGACCTCACATAAGGAAGTCTGATTCCACCTCACATCTTCAGATTAATTATTACTGTGGTCAAATAAATGCTCTGCTACTGTGTAGCCAATGAAAAGATTTTAAATTCGTTAATCATATAGTTTGGACTTCACCTATGGCTTCAACCTTTTGATTAAACAGAAAACTCTGTCCTTTTTTAGGCATATCACATAAGTGTTACATCAACCCACATAACTCTGTAACAGAAAACATCGTCTTTTTCAGACATCACATATGTCCAACATCAACCCACAAAAAATCTGTAATGTAGTTTTAGATATTTCACATGTATTCCAATTCCCATGTGCTCAAAATATTGATAGTTAAGTTTTACACACTAGCATTTGTGTTAAGTTGTTTCAGATCTTCTTTGTTTGGTGCACTTATATGTTTGGGGATTGACTAATATGTATCAATGTTTACAGACTCACGTGTTCCAAAGACCTCCTGTCTTTTCACGTTCCCTGATCTTTGCAACTGCATTTATGAGTTTCTTCTCGGTTGTTATAGCATTATTTAAGGTAACAATTGATTTAAATGAGAATTGAATTTCAAAAGTTTATTTGTTATCTTTTCATATTTTGTGACTCGTAAGATTTAAATTCTTGGTAAAAAATTAACATATAGCTTGAACTCATTCCATCTAATTTCTTTATTACTTAAAATGACCGTTATTGACCATTAGGTCAACCAGGGTGATTTATATTTAGTGTAATAATAGTAACATTTACTCTTTCAACTCCTAATCAATTATTCTTGTAACTTGTTATTGTACTTGAGTTTTTAGGATATACCAGATATTGATGGAGATAAGATATTTGGCATCCGTTCTTTTACAGTACGTCTAGGGCAAGAGCGGGTGGGTATTCAGTTATTCCATCTTTTTGCTCAAATTTTGGCATGAACATGTACAATCATATATCCTAGCACGATGATTTCACTTCTGCAGGTGTTTTGGAGTTGTATTTCCTTACTTGAAGTAGCATATAGTGCTGCCGTTTTAGTGGGAGTTGCATCTTCCTCCCCATGGAGTAAATGGCTAACGGTAAATCTCTAGTTCCTTAAAACGCATGCATAGACAACGTCATAGTTCTATGAAAAGAAAAATAGATTAAAAATAAAATAAAAACTGTTCTTACAACTAGTATGCAAGTAGAGATGACAAGTAACTTATATTTTTTTTCGAATATGATGTTAAAATATCATTTTGATTTTAGTCCTCTTGAACATGATCTATTTTAGTTCTTGTACTTTCGAATATCCAAGTTTAGTTTTTGTATTTTCAATAAATCTTAAACTATTGCCTACTGTTATTTATTGTTAACTTTTCAAAAAAAAAATCTCTATGTCTTTTAGTCTTTTGTCTATAAACTTAGGAATCATTTTCACATAATGTTGTTTTTGAATGAAAATTGTTACTATCATTTTACCAAGTTTATACAAGTTTGATATATATTAACTTTAGACATGACCAATTTTAATATTTATTGGAAGTATAGCACTAAAATAAGAAGTGATTTTGAAAGTTTTACAGTTACTTTGTTATGTTTAGAATTACTCCTAAATAAACATTTAATTGTTCAAAATCAATGATGACAGGTTTGAGAGTGTGATTTTGAACCTAACAAAAGTGATTTTAACTAATTTAAAATCGATCTCAACATAAGTACTTTCTAACTCATTTAATATCCTTATACATTCTTTAGGTTGTTGGACACATCACTTTGGCTTCCGTTCTTTGGATTCGTGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTTTACATGTTTATATGGAAGGTAGGAGCTTATCCTTCTAACTCTATTTGGATTCACTTTTTAAATGCTTAAAAAATATTTGTGAATGAAAAAAAAAATGTTTTAAAACCATTATTAAGAAGTCAATTCAAACAGACAATAAATAAGAAATAATTGATAGTTAAATGAGCGTCAATGCCATGATGGTAAGGTGCTCTAAGGGGTGGTCTAACTTGTAGTCTAGTAACTATAAATTTGAGATAAAATAAATGTTTATTTGTAGTTGATGTCTCCCGAAAAACGTGTGAAATAATCAATCACTCTATGAGTTTATGCTGTTGGATTCAATATTGATTCAGTCAATTTTAATAGCTATAAATTCACTTCTGAAGCATAGGAATATTTCATTGGAAAAAAGCCAGTTCTCGGAGGATAATCTACTTCGTGTATTCTTTTAAATGCTTTTGGTGGTATCAGTTTGTTATATGTTTTATTGAGGATGAGTCAACTGCTTACTTTTGGAAAGATTTCTTGGTGGGAAAGAAACCCCTAGGTATTTTATTGACCGAAATCTGGTGAGGTGGTCAACCTTCCTTCTATTATTTCTGACCATCGTGGGAGAAGGGACTTGAGCTCTTGGGTTCTGGAGGCCCTCAAAGGGGTTTCTAATAGGCCTTTCTTTTGAATTCTTTGTGCCCTTCTCCTCCTCTAAGAGCCCTTGTGTTTTCCTCTCTTTGGAGGGCTTTTAGGTCTGCTATTGCTGCAGGTGTTCCTATGTATTATCAGTTTGTTAACGAGTTTTTAACGCATTACTTCAAATCAGTTATGAGCAATACAGAATTAAACCATTTTGTATGTGGGCATTAAATATCTGATATCTTGTTGAGTACTCTTTTTAGTTCAATTGGAATCGGGTAATTTTAAGCTTCTATCTCTTGATTGATAGTGTGTCCAAACCAGTCAAACTATGTTAATTGCTAAATGTTTTTTTTTTTTTTTGACAAATAACTCCCATTTGCTTTTCGTTAGCAAAGTTTACATCTCGGTAGCTAGACATAGTCTTCTCGGTGTCTTAGATGGACTCTCTTCAAGTATCGGAGTCGAAGGAGTTTTCTATTTATTCTTCTTTCTCTTATCTTTTATAAATAGTTTGCTTTATAAACATTTGCTTTATGAAAGTTATTGTTATTATTCTTGCTTTTTTAAAAACTCTCCCTCTCTCTGACCGTCTATTGATGTTCTGGTTTGCAGCTTTTTTATGCTGAGTATTTGCTGATACCGTTTGTTCGGTGAGGGTCTGAGCAAGAATGTGATTAGGTGGAGTGTGTATTGTACAAACTCCTTGATAGAAATGGAGTAATACGTTTCTGTTAAATTCCAAGTCACAAAAGCAATCCATTAGCAATCTCCAATTTGAATAATTAGATGATTATCTTCGTAACATTTAGCTTTGGGACTGACATTGCAAAAGAGGTTAATATGGAGAATATGTTTTCTGTTGAACACTTAATCTTTCTGGATTATATCATACGACATGCATAAGGTCTTGTGGTCTTGTATTTAAAATTGTGACCAAAATTGAAATTTAATGGGATGATGTACATAGAAGTCATAACCAATCATGAGGGGTACTACATGCATTACAAAATTCACACGAATATCATAATAATAATTTAATAACATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCACAAAGAACGTGACAATTTCATTTGATCTTAACTTGTAGGCATTCTAATAGTAAGTTCATTTACTATATTTGCTTAAACTAGTGTTTAACAACGATAAAGTGCCTCCTAAACTTAATTTTAATGTAATCTAATTTCACCTATGAATTTCATGCCTTCAAAATATCTAATTTAAAACTCATCATGGAGTCATATAATGATAAATAATCTTAATCGGTAAAAATAGTAACTAAATTGACTTTTTTTTTTCTTTTCTTCTCGAGAACAGTCCAAAAGGGTTAAGGGTCCTTGTGGAATTTAAATGGTAGTTATAGTAGTCTTTGTTGGGCTGGTTGTGCGTGGCAAGTTAGATAAACACGACTCTCAACAATGGTATGATATTTTCTACTTTGAGTCTAAGCTTTTATGACTTTGCTTTGGACTTCCCAAAAAACCTCATACCAATGAAGATATATTCATTTACTTATAAACTCATGATCATTCTCTAAATTAGCTAATGTAGGACTCACTCCCAACAATCCTCAACACTACATAGATGGGTTTCGTGGATCGTGGGCTACTAGATCTCGAGTCGGTTAGATTGATATTTTCGATGACTCGCTAGAGACCTTGTGATTTCGACTATGACATTATATATGCAGCTCACTTAGTTACACAATTAATCTCTCCGCTAATGTTAATAAACATTAAATATAAACTCAAGAAAAAAACACTATTACATTTAAAATCAAGTTGTAAACCGAGAACAAACGTTGAGGAGCAATTGTTGGGTGGTGTTGTCAATCCCAAATTTGTAGGAGAACCATGGGGCGGACAACAATGTGAGCATCTAATTTTGTTGCCTCACAAAGTTATTCATACAACCATGTTATGCACACTCCACCCCGATTATATCGTCCTCTACAACTTCAAAGTATGCTAAGAGTAGTAGAAACATCATAGACATAAGGTTGTTTTAATTACGAGAGAATTAACTCCCATCAATTAAGTGCACATGTATGCTCGAGCATACCTCACAACAATATCCTCATCTGCATCGTCATTTGGCCTTGAGAATTGAAATGCTAACCAGGGTAAGCTTAATCTCGAGTCCTTAAAAGAATTGAAATGAATGACACATATGTACTCATAGTTCGTCAACCTTGCAATAGGCTCACCATCTATGGACAATCCAAGCAAGAGCTCCACGTCTTGTATAGTGATAGTATACTCCCAACCATATGTGTGAAACATACATGTTCTTAGTCTTGTCTCAACAAATGCAATAATGAAATGTTAGTTTAATTCGATGAAACTTAATCTTTGTCACTCTTAAAAAAAATTTCAACAAGTTGTATTGGCGGTAATAAGATAATGCAATAAGACTTCGAACGACATGATGCAATTATTTATAATAAAAAATAATAATTTTGATTATTTTATTTACCGTATAATACATAATATTAAGAAATAATTAAAGGTTGACAATAATCTCCCATTTTTATATACAATAGATAATAAATATAAATTAGAGAGTTTCCTACCAAATATACCAATTCTCTTTATTATATTTTATTTTACCTTTTCCACTCTTTTTGAAATATTTTGGTTTCGTCTTCGTGGAAACCCTAAAATTGAAACCCACTTCCCAAGTTTTGCTGTTAAAAATTCCCTTCGGCTGCGCCTTTGTCTTAGTCAATTCTCTCCTCCAGACCTTGCACTCCAAGAAATCAGTGTGCTTTATAACCTTCTGTTTGGAGCTTTGACTATTCATTGTCTGGAAATGGCGGATTCTGTAGACGGAGCTGCGAAGGCTGTCTCTGAATTGGCATTGGGTTCCGCTTCTGCGGCTTTAGACATGGCCGACTCTGCTCCAAGTGCTGAAGAAACTATAAGCAAGAAGTGAGTGTTCTGTTGAATTTTTGTTCATTGGTGCGTTTTTAGCTAATGTGTGGAAATGGATGTTAGAGTTAACTTATTTGTAGCTGGGTTTAGTCTTAGTCAATAGATAGGTTAAATTTGATTATGTCATTGCCATTTTTGTTCTTTTAGTTTTGTTATTAGTTGGGTAGTTTTTCGTCGAAATTACGACTTTTGAAGTTGTAGGGTTTTAACCTTGTAATGTTTTCAGTGCACGCAAGAAGGAATTAAAGATGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAATTGAAGGAGAAAGCAAAGCAGGTACTAGCAATTACAAATGGAACACCTATAGATTCAAGTGTTTAGAATGCATTATTTAAGAATAGAGCTGGGTGAAATAATTATCCATTCTCGAATGAGAATATCAAATATGGTGCCTCTAATTGGCAGTTAGTTTAATAACTATACTTGTATGCAAGGAAACGAGTTGTAAATTCTGTTGGCCAGATTTCATGTTTTAATGTTATTCTTGACTACCACTACAGAAAGAACTTTGCGACTGAAATGTATTTATGTACCAGGAAGCATCCCAGAATAAGAAATCTGTAGCGGTAGATGATGAAGAAATGGACCCCACGGTACAACTATTAAGTTCTTATTTTGACTTCTACTTCAGAACTTTTAGAATCGTTGTCATACTGATTTTTCTCCCCCAATTGGCTTGTGTTTCCAGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTAAAAATCCATATCCTCACAAGTTTCAGGTTTCAATGTCTCTCCTTGAGTATATTGAGAAATATGGAAGTTTAAACAATGGTGATCATCTTGAGGAAGTCATGGTTTCTCTTGCCGGTAACTAGAACCAAACTGATACCTTTTTCGTGATTCTTTTTGTTGATATCCCAATCATTTTCTCATATCTGTTTCTTTTTTCTTCATTTAAGGGAGAATAATGAGCAAAAGGTCATCCTCCTCGAAGTTGTTATTTTATGATCTCCATGGTTCTGGAGCTAAAATCCAAGTTATGGTGGATGCACGGTATGGAACTATTTTGTATTTCTCGCTACTTTAATTCGATAGTACTAGTTATGAATATTAAGGGTCGTCTTAATATCGTTCTTGTTTCCTATTTTCTGTTTTTATTTGTTTCTCATTTCTCATTTCTCATTTCTTGTTTTTTAAGAGCTAAATACAAAAAACATGTTTGATAACTATTTGTGTTTTATTTATGTTTCTTGTCTCTTTGAAAAGGAAAAAAAAAAAAAAAAACAGAAATGCGTTTGATAATTGTTTCTTATTTTTTTTAGTTTAATTAAAATTTAATGCATGTAATATAATAAAATGTATAACATGCATTAAAACAAATAAAAATCTACAGTTTCAGCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAGAAGTTTTTTTAATAAAATTTATCTTCCAAATGTTATTCAAATTTAATTCGCAATGTCAAATCTCATTCTGACCAATTCACCTTAAATGATGTCGGCTGACATGAGTTAGTTTAATTAGACTAATTTGTACACAAACTTTGTAAATTTTTAATGATCATCAATTTATTGGATACCATGCTATTGATATATATATTTTTATGTCGACTTGGTAACGAGCCATTTATTGGATATCATGCTTATAACATATATATCTCTGTGTGTCAACTTGGTTATTAGCCATTTATTAGAGTAGAGATAATTGAGCATACCCACATTTATTTAAATCAGTAGTAAACTTTTTTTCCCTTTAAAATGCATGTGTTTTTCATTAGACATATGTATACATACACACACATAAATATTCATGATTGTACATTATAATAAGAGAAAGTTATTTAAGTTCTTGGGAAATGAAATGACATAACATCTGTATTTTAACTTTCTAGATTCCATACAAATTTTAATTTTGTAGATCCTATCAAACCACCCAATATGGCCTATCTTTTATGAATTTGAAGTGCATGTGCACCAAAGTTGTTGTCAAGTCTTATTTTGTGCTTTTTATCCATTGAAACCTACTTGGCTCCTATTTTTGTTCTTCAATTCAATACAAAGGTTATACTATTTCCACTTTAATGATGCAGTAACTCAGAGCTAGATGAAGCTGAGTTTGCAAGGTTTCATGGTGCTGTCAAGCGTGGCGATATTGTTGGTGTCACTGGGTTTCCAGGTTGGGCTGCAAGGATGGGCTTCACCTTTTTTTTCCACTAATAATTTCTCTATATTTTGCAGAAGTCTAGTTTATGATGTTTGTTCTTCAATTGTCTTTTTCCTTTTTAGTCCCTTATGTGTGCTATCATAATTTGAGAGAGAGAGAGAGATCCATGGCTTGACGTTTTATTCCTTGAGCTTCTCATTTCTTTCTATTACGTTACTTTTATGAATACAGAAAATTTATTTTCTGGAGTAAGCTTAATATGTTCTATTCTTGCAGGAAAAACAAAGAGGGGAGAGCTCAGTATTTTTCCAAAATCATTTATTGTCCTATCTCACTGTCTGCATATGATGCCAAGGCAGAAGGCGGCCCAAGGGTCTGAGAATGCAAATTTGAAGGTAATTGAACCTAGTTTTTATGTCTGGGTTATTTGGATGGCTTCTCATTGTGTTCTCATTTTTGGTTCAGAAAAATGACGCATGGGTCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAAGACCAGGTAACTATTCTATTTGTGTTGCGCACTTCCTTTTGTTTACTTACGGGAACATCTGTTTTGTTTTATCTTTTTCTATTTTTCTTGGGTGGAAAAGTTGCACTTTTATGATCAGTATTTTAAAAAAGCCCTCTCAGGCGAGCACAACACACGCCTATGCATGGGTCTGGTGCGAATAAAAATTGTGCTTTCACCACATTCTAATCTCCATTTGATATTGCATTTCTGTCTCCATAGACGATATTCTCTTAGGATTAAGTCTTGTAATTCGGATTTCAAAATGGATTTTCTAATGGAAGTCTTGGCTTGAAAGCCGCCGGCTTGACTATTAAACGTTCCAGGTTCAGATAGTAATTAACAAGCTTACTTTTGGTTTACGAACGGCTTGGGAATTTTCACATAAAAACTTGTATGCCCCTCATGACAACTGCGGTTTGTTTATTTGTCTTCTTTGAACCCAAGGACACCTGGACAACCTATATAACATATCCTGTTCTAGTTAAAACACTTATTAGTTATTCCACTCCCTCTAGAAACTTTATAAAAGGTCTACAAGATCTATGATCACAAGAACAATATTAGCATAGCGGTTGAGGAAAGATTAAAAAATTCAAAGAAATACAGTAAACTTAGAATTTGAGAGGATATTTCCACAAGGCAGCAGCAAAAACTATTAGATCCTAATTACTTCCCATTGTCCTCCAACATCCAGGAAAATCCTTCAAGCTTTTTCCAACCAATGTACCTCCGGTAGAAGCCAACTTTCGTTATGATCCAAAGAACTTTTTGAAGCCAATTTTCTTGATGATTAAGGAAAGTATAAAAATTAGGGCCACCAATTTTGTGGTTGTATAATCGGAGCAATAAAAAAAGCCACTAAACAGAAACAAAATATTTACATTAAGAGACTCCAATTGTTCAACATTAAGGATAACTGATAATTACAAAAAAATATGTTTGAAGAAACCACCCGAAGAGGCATTGAAGTACACTCTAACCTCCTTAGAACCCTCTATTATACCGTTAAAAATATCCTTTTCTCTTGAGCCACCCACCTAACCACCTAACCCAAGAATCTGTTTAGCATGTTTATTCAAGGTTGAATATTGGATACTGCATGATTGGGTTCAACTCTAAATTTGAAGGTTTCTGGTTATATTTGTTAAAAGTCAACCTTTAGATTTTATGTGTCTACATGAATTTGCGTCCAACATTGAATTTTAAGGTTGCTTAAGATTTTTGTTAAAGTATATCAATTTTCTTGGTAGTGACTTCAATTCTGATACAACTTTGGAAGTACCGAATGAGTTATAGGTTGTTTGAGATTTGTAGCTAGCACATCAAGTCATTTCAATTCTGTAATTTTTTGGACACCATTAATCAAATTTCTAAATAATAAACTAACTATACGTACCGCCATTCCCTCGAATTACATTTGTTATGAACATTCATACAGCTTTTGATTGTACCATGAACATCTCAATCTCTCTGATTCATGCATTTTCTCCCAACTATATACAACATTTTAATTGCTGACACTCTGTCCCTGGGTTTGTTGAATTCTCATCCTTGGTTAAACATTTTGAGACAATGTCTTCCAAATATTATGGTATTGATGTGTTCAATTTCATAATTCCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGATGATCTCGACTTCTTGGAGGTTTGTTTACAATTGACAATTGAAATTTATGATTTTTGATTAAATGTGCCTGTAATTTTTTTATAATTTTATTTTTTTTCTTAATGTCTTAACCCTTAGGTTGAAACACCAATGATGAACATGATTGCTGGAGGAGCAGCAGCCCGTCCATTTGTGACCTTCCACAATGATCTTAACATGAAGTTGTTTATGCGTATTGCACCTGAACTCTATCTTAAGGAGTTAGTTGTTGGTGGGTTAGATCGTGTATATGAGATAGGGAAGCAATTTAGAAACGAGGGTATTGATTTGACTCATAATCCTGAATTCACCACCTGTGAGTTCTACATGGCGTTTGCTGACTACAATGATTTGATGGAGCTCACTGAGAAGATGCTAAGTGGTAATTTTTAAACTTCAGATTTTGCATGCATATTAACTCATATGGATTCTCCACCATCGCCTTTCCTAATTTCCATCTTTTTCTACTTGTATCTATTCTTCTCTGACATTGTTGACCTTAAATAGGGATGGTGAAGGAGCTTACAGGGGGTTATAAAGTAAAATATCATTCAAATGGGCTTGATAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGTTTGTTTGCAATAATTTTGTTTAGCCCGTGTTTAAACTTGCACTGCGCTGACCAGAATCTTATATTAAATTATCTTGATTTTTTTTTTAACTTACTGCAGGAGGGTTGACATGATAGAGGAATTAGAAAAGATGGCAAACCTTGATATACCCAAGGACTTATCCAGTGATGAAGCTAATAAATATCTTAGAGCGGCATGCCAGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAAGTAATCCTCTTTATCTTATGATTTTATCTTTTGAAGCTAATCTTGTTTGGCTAAGAAATATTATATAGTAAGATACGGAAATACATGGGAAGAGAAGACAAGTAGTTCTTATTTCTGGAAAATGTACACTAGTTCATTTTTCTCAACAGTATTTTAAAAGTAATTATTTTGGCAGCTTGTGGGGCACTTCCTAGAAGAAACATGCGTGAATCCTGCTTTCATCATCAACCATCCGGAGATTATGAGTCCCTTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGTTTTGAATTGTTCATCAACAAACATGAAGTATGCTTCCAAAACTTAATAATACTCTGTTTTCTGGTCTTTCTTCATCATACACGTGTCTGCTTGTGCGTGCCTTCTGTTTCTGCTGTTAACATTTGATGACTACTCAGGTATGTAATGCGTACACTGAATTGAATGATCCTGTGGTACAACGCCAGCGGTTTGCCGAACAACTTAAGGTATCTTACCCTGTAATAAATAGACAACTACAGTATTGAGTTATAAAACCTTCTGAAATCTAAATGACAATTTGTTGGCTTTTATTGTGCTTGTTTTTTTTTTAATAGGACCGACAGTCTGGTGATGATGAAGCAATGGCTTTGGATGAAACGTTTTGTACGGCACTCGAGTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGTATTGATAGGCTAGCTATGTTGTTGACGGATTCACAGAACATTAAGGTTTGTGCTTCACACCTCTCTTTTTTGTGTGACCTCGATTGGCTGCTTGATCTGGTAAATGCGTACTCCTCAAATCTCTCTCTTTTTTTTTTCTTAAACTGTTCTTTTTGTGAAAATAGGAAGTTCTTCTCTTCCCAGCCATGAAGCCCCAAGATGAACCACCAGCCCCCAAAGGTACATACTATATTATTCCTGGTCTCTAGCTATTAACTTACTTTGATTATCAGTATTTTGATGAGGCCTATACCTAAAAACGGAACCTGTTTAATCTTTCTAATCCTTCAGTTTTTTTTTTTTAAATGAAAAATGGCATTAATTGAAGCCTGAATTAGAGGAGGATCTTAATCCCTGTTTCATATTGTTATGCTCTCAGATGTATTGTTGGTTCATTCTGCGCCTTGTGAGAGTTTTTTATGATAATTTCGTTTATTTATTTATTTTTGTATTTTCAGCCTCAACTGGAGTATAGGTATGATCACATTATGAGGAAATCCAAGAGGTTTGTTTGCGGTCAGGCAGTTATTTTAGGACGTCAAAAAATTTGGGTCGTATTGTTTAGCCTCCCTGCTGCTGGAGCAGGGATTTGTTGGACACATTTAACATGTATGAAATTGTTCTCGTCTTTTATAATATTATCATCATTACAATTTTTTGTGAATGCATAATTTTTTAAATAGACACCTTAAATTCTTTCGAAATGCTCTTGCTATCATCCTTCTGGATACGATATAACCCAGAATCAAACTTGGGCCGAA

mRNA sequence

TTTGGTTCGGTTGTTCAGAGCTCGGGCGGAGAAGGCGAGAAAAAAGTTTGCTTCTGCATTCTTCAGAGCTCTGAATCTCCACCATTTTCCTTTCCTTCTCAAAGGGAGAAACCGTCTTGGCAATGGATTCCGTGTTCGTTAGAGCCTACCGAAGTCATGTTGTAGGTGGGATTGGAAGCGGCTGGACAAATCGTGACGTCAACAATGTTTGGCTTCCAAGTCCAAGGCCTGGAGCACTGAAGATTTCTAAGAGGCCCAGTTGGGTGGAGTCTGAATCTAAATCACATCATGTTGAATGTGTCTTTAGAAGACATCGGGAAGGATACACCTTCTGTCAGAAGAAAGACAACCGAATTCAAATTAGAAATGCAGCCTCTAATCAGCCTTTTGAATCCGAATCGGAAGTTTTACATTCCAAAAATTATGGTGACTCTGTAAAGAGTTTCTTGGATGCTTTCTATAGGTTTTCACGGCCGCACACAGTTATTGGTACAGCATTGAGCATTGTATCAGTTTCTCTACTAGCTGTTGAGAAACTATCAGACTTGTCACCATTATTTTTAACTGGNTTTTTGGAGGCTATAGTTGCTGCCCTCTTCATGAATATTTATATTGTAGGTCTGAACCAATTATTTGACATCGAAATAGACAAGATTAACAAGCCATATCTTCCATTAGCATCGGGAGAATATTCTTTTGGAACTGGCGTTGCAATTGTCTTCACGTTTTCTATCCTGAGTTTTTGGCTAGGATGGGTTGTTCGTTCATGGCCATTGTTTTGGGCACTTTTGATCAGCTTTATTCTTGGGACTGCTTATTCCATTGATCTGCCACTGTTGAGATGGAAGAGATTTGCTGTGGTAGCCGCTATGTGCATTCTAGCTGTTCGAGCCGTGATTGTTCAACTTGCTTTTTTCCTACACATGCAGACTCACGTGTTCCAAAGACCTCCTGTCTTTTCACGTTCCCTGATCTTTGCAACTGCATTTATGAGTTTCTTCTCGGTTGTTATAGCATTATTTAAGGATATACCAGATATTGATGGAGATAAGATATTTGGCATCCGTTCTTTTACAGTACGTCTAGGGCAAGAGCGGGTGTTTTGGAGTTGTATTTCCTTACTTGAAGTAGCATATAGTGCTGCCGTTTTAGTGGGAGTTGCATCTTCCTCCCCATGGAGTAAATGGCTAACGGTTGTTGGACACATCACTTTGGCTTCCGTTCTTTGGATTCGTGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTTTACATGTTTATATGGAAGCTTTTTTATGCTGAGTATTTGCTGATACCGTTTGTTCGTTTTGCTGTTAAAAATTCCCTTCGGCTGCGCCTTTGTCTTAGTCAATTCTCTCCTCCAGACCTTGCACTCCAAGAAATCAGTGTGCTTTATAACCTTCTGTTTGGAGCTTTGACTATTCATTGTCTGGAAATGGCGGATTCTGTAGACGGAGCTGCGAAGGCTGTCTCTGAATTGGCATTGGGTTCCGCTTCTGCGGCTTTAGACATGGCCGACTCTGCTCCAAGTGCTGAAGAAACTATAAGCAAGAATGCACGCAAGAAGGAATTAAAGATGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAATTGAAGGAGAAAGCAAAGCAGGAAGCATCCCAGAATAAGAAATCTGTAGCGGTAGATGATGAAGAAATGGACCCCACGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTAAAAATCCATATCCTCACAAGTTTCAGGTTTCAATGTCTCTCCTTGAGTATATTGAGAAATATGGAAGTTTAAACAATGGTGATCATCTTGAGGAAGTCATGGTTTCTCTTGCCGGGAGAATAATGAGCAAAAGGTCATCCTCCTCGAAGTTGTTATTTTATGATCTCCATGGTTCTGGAGCTAAAATCCAAGTTATGGTGGATGCACGTAACTCAGAGCTAGATGAAGCTGAGTTTGCAAGGTTTCATGGTGCTGTCAAGCGTGGCGATATTGTTGGTGTCACTGGGTTTCCAGGAAAAACAAAGAGGGGAGAGCTCAGTATTTTTCCAAAATCATTTATTGTCCTATCTCACTGTCTGCATATGATGCCAAGGCAGAAGGCGGCCCAAGGGTCTGAGAATGCAAATTTGAAGAAAAATGACGCATGGGTCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAAGACCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGATGATCTCGACTTCTTGGAGGTTGAAACACCAATGATGAACATGATTGCTGGAGGAGCAGCAGCCCGTCCATTTGTGACCTTCCACAATGATCTTAACATGAAGTTGTTTATGCGTATTGCACCTGAACTCTATCTTAAGGAGTTAGTTGTTGGTGGGTTAGATCGTGTATATGAGATAGGGAAGCAATTTAGAAACGAGGGTATTGATTTGACTCATAATCCTGAATTCACCACCTGTGAGTTCTACATGGCGTTTGCTGACTACAATGATTTGATGGAGCTCACTGAGAAGATGCTAAGTGGGATGGTGAAGGAGCTTACAGGGGGTTATAAAGTAAAATATCATTCAAATGGGCTTGATAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGAGGGTTGACATGATAGAGGAATTAGAAAAGATGGCAAACCTTGATATACCCAAGGACTTATCCAGTGATGAAGCTAATAAATATCTTAGAGCGGCATGCCAGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAACTTGTGGGGCACTTCCTAGAAGAAACATGCGTGAATCCTGCTTTCATCATCAACCATCCGGAGATTATGAGTCCCTTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGTTTTGAATTGTTCATCAACAAACATGAAGTATGTAATGCGTACACTGAATTGAATGATCCTGTGGTACAACGCCAGCGGTTTGCCGAACAACTTAAGGACCGACAGTCTGGTGATGATGAAGCAATGGCTTTGGATGAAACGTTTTGTACGGCACTCGAGTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGTATTGATAGGCTAGCTATGTTGTTGACGGATTCACAGAACATTAAGGAAGTTCTTCTCTTCCCAGCCATGAAGCCCCAAGATGAACCACCAGCCCCCAAAGATGTATTGTTGCCTCAACTGGAGTATAGGTATGATCACATTATGAGGAAATCCAAGAGGTTTGTTTGCGGTCAGGCAGTTATTTTAGGACGTCAAAAAATTTGGGTCGTATTGTTTAGCCTCCCTGCTGCTGGAGCAGGGATTTGTTGGACACATTTAACATGTATGAAATTGTTCTCGTCTTTTATAATATTATCATCATTACAATTTTTTGTGAATGCATAATTTTTTAAATAGACACCTTAAATTCTTTCGAAATGCTCTTGCTATCATCCTTCTGGATACGATATAACCCAGAATCAAACTTGGGCCGAA

Coding sequence (CDS)

ATGGATTCCGTGTTCGTTAGAGCCTACCGAAGTCATGTTGTAGGTGGGATTGGAAGCGGCTGGACAAATCGTGACGTCAACAATGTTTGGCTTCCAAGTCCAAGGCCTGGAGCACTGAAGATTTCTAAGAGGCCCAGTTGGGTGGAGTCTGAATCTAAATCACATCATGTTGAATGTGTCTTTAGAAGACATCGGGAAGGATACACCTTCTGTCAGAAGAAAGACAACCGAATTCAAATTAGAAATGCAGCCTCTAATCAGCCTTTTGAATCCGAATCGGAAGTTTTACATTCCAAAAATTATGGTGACTCTGTAAAGAGTTTCTTGGATGCTTTCTATAGGTTTTCACGGCCGCACACAGTTATTGGTACAGCATTGAGCATTGTATCAGTTTCTCTACTAGCTGTTGAGAAACTATCAGACTTGTCACCATTATTTTTAACTGGNTTTTTGGAGGCTATAGTTGCTGCCCTCTTCATGAATATTTATATTGTAGGTCTGAACCAATTATTTGACATCGAAATAGACAAGATTAACAAGCCATATCTTCCATTAGCATCGGGAGAATATTCTTTTGGAACTGGCGTTGCAATTGTCTTCACGTTTTCTATCCTGAGTTTTTGGCTAGGATGGGTTGTTCGTTCATGGCCATTGTTTTGGGCACTTTTGATCAGCTTTATTCTTGGGACTGCTTATTCCATTGATCTGCCACTGTTGAGATGGAAGAGATTTGCTGTGGTAGCCGCTATGTGCATTCTAGCTGTTCGAGCCGTGATTGTTCAACTTGCTTTTTTCCTACACATGCAGACTCACGTGTTCCAAAGACCTCCTGTCTTTTCACGTTCCCTGATCTTTGCAACTGCATTTATGAGTTTCTTCTCGGTTGTTATAGCATTATTTAAGGATATACCAGATATTGATGGAGATAAGATATTTGGCATCCGTTCTTTTACAGTACGTCTAGGGCAAGAGCGGGTGTTTTGGAGTTGTATTTCCTTACTTGAAGTAGCATATAGTGCTGCCGTTTTAGTGGGAGTTGCATCTTCCTCCCCATGGAGTAAATGGCTAACGGTTGTTGGACACATCACTTTGGCTTCCGTTCTTTGGATTCGTGCCAAATCAGTTGATCTGAAGAGCAAAGCTGCCATAACATCCTTTTACATGTTTATATGGAAGCTTTTTTATGCTGAGTATTTGCTGATACCGTTTGTTCGTTTTGCTGTTAAAAATTCCCTTCGGCTGCGCCTTTGTCTTAGTCAATTCTCTCCTCCAGACCTTGCACTCCAAGAAATCAGTGTGCTTTATAACCTTCTGTTTGGAGCTTTGACTATTCATTGTCTGGAAATGGCGGATTCTGTAGACGGAGCTGCGAAGGCTGTCTCTGAATTGGCATTGGGTTCCGCTTCTGCGGCTTTAGACATGGCCGACTCTGCTCCAAGTGCTGAAGAAACTATAAGCAAGAATGCACGCAAGAAGGAATTAAAGATGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAATTGAAGGAGAAAGCAAAGCAGGAAGCATCCCAGAATAAGAAATCTGTAGCGGTAGATGATGAAGAAATGGACCCCACGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTAAAAATCCATATCCTCACAAGTTTCAGGTTTCAATGTCTCTCCTTGAGTATATTGAGAAATATGGAAGTTTAAACAATGGTGATCATCTTGAGGAAGTCATGGTTTCTCTTGCCGGGAGAATAATGAGCAAAAGGTCATCCTCCTCGAAGTTGTTATTTTATGATCTCCATGGTTCTGGAGCTAAAATCCAAGTTATGGTGGATGCACGTAACTCAGAGCTAGATGAAGCTGAGTTTGCAAGGTTTCATGGTGCTGTCAAGCGTGGCGATATTGTTGGTGTCACTGGGTTTCCAGGAAAAACAAAGAGGGGAGAGCTCAGTATTTTTCCAAAATCATTTATTGTCCTATCTCACTGTCTGCATATGATGCCAAGGCAGAAGGCGGCCCAAGGGTCTGAGAATGCAAATTTGAAGAAAAATGACGCATGGGTCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAAGACCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGATGATCTCGACTTCTTGGAGGTTGAAACACCAATGATGAACATGATTGCTGGAGGAGCAGCAGCCCGTCCATTTGTGACCTTCCACAATGATCTTAACATGAAGTTGTTTATGCGTATTGCACCTGAACTCTATCTTAAGGAGTTAGTTGTTGGTGGGTTAGATCGTGTATATGAGATAGGGAAGCAATTTAGAAACGAGGGTATTGATTTGACTCATAATCCTGAATTCACCACCTGTGAGTTCTACATGGCGTTTGCTGACTACAATGATTTGATGGAGCTCACTGAGAAGATGCTAAGTGGGATGGTGAAGGAGCTTACAGGGGGTTATAAAGTAAAATATCATTCAAATGGGCTTGATAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGAGGGTTGACATGATAGAGGAATTAGAAAAGATGGCAAACCTTGATATACCCAAGGACTTATCCAGTGATGAAGCTAATAAATATCTTAGAGCGGCATGCCAGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAACTTGTGGGGCACTTCCTAGAAGAAACATGCGTGAATCCTGCTTTCATCATCAACCATCCGGAGATTATGAGTCCCTTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGTTTTGAATTGTTCATCAACAAACATGAAGTATGTAATGCGTACACTGAATTGAATGATCCTGTGGTACAACGCCAGCGGTTTGCCGAACAACTTAAGGACCGACAGTCTGGTGATGATGAAGCAATGGCTTTGGATGAAACGTTTTGTACGGCACTCGAGTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGTATTGATAGGCTAGCTATGTTGTTGACGGATTCACAGAACATTAAGGAAGTTCTTCTCTTCCCAGCCATGAAGCCCCAAGATGAACCACCAGCCCCCAAAGATGTATTGTTGCCTCAACTGGAGTATAGGTATGATCACATTATGAGGAAATCCAAGAGGTTTGTTTGCGGTCAGGCAGTTATTTTAGGACGTCAAAAAATTTGGGTCGTATTGTTTAGCCTCCCTGCTGCTGGAGCAGGGATTTGTTGGACACATTTAACATGTATGAAATTGTTCTCGTCTTTTATAATATTATCATCATTACAATTTTTTGTGAATGCATAA

Protein sequence

MDSVFVRAYRSHVVGGIGSGWTNRDVNNVWLPSPRPGALKISKRPSWVESESKSHHVECVFRRHREGYTFCQKKDNRIQIRNAASNQPFESESEVLHSKNYGDSVKSFLDAFYRFSRPHTVIGTALSIVSVSLLAVEKLSDLSPLFLTGFLEAIVAALFMNIYIVGLNQLFDIEIDKINKPYLPLASGEYSFGTGVAIVFTFSILSFWLGWVVRSWPLFWALLISFILGTAYSIDLPLLRWKRFAVVAAMCILAVRAVIVQLAFFLHMQTHVFQRPPVFSRSLIFATAFMSFFSVVIALFKDIPDIDGDKIFGIRSFTVRLGQERVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVLWIRAKSVDLKSKAAITSFYMFIWKLFYAEYLLIPFVRFAVKNSLRLRLCLSQFSPPDLALQEISVLYNLLFGALTIHCLEMADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEELKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRVDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQDEPPAPKDVLLPQLEYRYDHIMRKSKRFVCGQAVILGRQKIWVVLFSLPAAGAGICWTHLTCMKLFSSFIILSSLQFFVNA

Homology

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BLAST of CmaCh05G006930 vs. ExPASy Swiss-Prot
Match: Q9ZPI1 (Lysine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At3g11710 PE=1 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 2.6e-270
Identity = 467/620 (75.32%), Postives = 531/620 (85.65%), Query Frame = 0


Query: 449  MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 508
            M  + D   KA+SELA+ S++       SA       SKNA KKE KMKQKEEE+RRK+E
Sbjct: 1    MEGAADQTTKALSELAMDSSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDE 60

Query: 509  LK-EKAKQ-EASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLL 568
             K EKAKQ   + ++K+VA DDEEMD TQY+ENRLKYLA++KA G+NPYPHKF VSMS+ 
Sbjct: 61   EKAEKAKQAPKASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIP 120

Query: 569  EYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELD 628
            +YIE YGSLNNGDH+E    SLAGRIMSKRSSSSKL FYDLHG   K+QVM DA  S LD
Sbjct: 121  KYIETYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLD 180

Query: 629  EAEFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENA 688
            EAEF + H   KRGDIVGV GFPGKTKRGELSIFP+SFI+LSHCLHMMPR+     ++N 
Sbjct: 181  EAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRK-----ADNV 240

Query: 689  NLKKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLD 748
            N KK + WVPG TRNPE Y+LKDQE+RYRQR+LD++LN+EVRQIF+TRAK+I YVR+FLD
Sbjct: 241  NAKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLD 300

Query: 749  DLDFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIG 808
            + +FLEVETPMMNMIAGGAAARPFVT HNDL+M+L+MRIAPELYLK+L+VGGL+RVYEIG
Sbjct: 301  NKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIG 360

Query: 809  KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLD 868
            KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLME+TE MLSGMVKELTGGYK+KY++NG D
Sbjct: 361  KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYD 420

Query: 869  NDPIEIDFTPPFRRVDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTA 928
             DPIEIDFTPPFRR++MI ELEK+A L+IPKDL+S+EANKYL  AC +F++KCPPP+TTA
Sbjct: 421  KDPIEIDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTA 480

Query: 929  RLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTE 988
            RLLDKLVG FLE TCVNP FIIN PEIMSPLAKWHR++  LTERFELFINKHE+CNAYTE
Sbjct: 481  RLLDKLVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTE 540

Query: 989  LNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDS 1048
            LNDPVVQRQRFA+QLKDRQSGDDEAMALDETFC ALEYGL PTGGWG+GIDRL+MLLTDS
Sbjct: 541  LNDPVVQRQRFADQLKDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLSMLLTDS 600

Query: 1049 QNIKEVLLFPAMKPQDEPPA 1067
             NIKEVL FPAM+P  E  A
Sbjct: 601  LNIKEVLFFPAMRPPQEESA 615

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BLAST of CmaCh05G006930 vs. ExPASy Swiss-Prot
Match: Q6F2U9 (Lysine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0586800 PE=2 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 1.7e-261
Identity = 446/584 (76.37%), Postives = 502/584 (85.96%), Query Frame = 0


Query: 483  ETISKNARKKELKMKQKEEERRRKEELKEK----AKQEASQNKKSVAVDDEEMDPTQYFE 542
            + +SKNA+K+E K K++EEERR KEE K+K        + +  K  A DDEEMDPTQY+E
Sbjct: 25   QQLSKNAKKREEKRKKQEEERRLKEEEKKKKAAATAAASGEPPKESAADDEEMDPTQYYE 84

Query: 543  NRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSS 602
            NRLK L S KA G NPYPHKF  ++++ +YIEKY S+N GD L +V   LAGRIM+KR+ 
Sbjct: 85   NRLKALDSLKATGVNPYPHKFLANITVADYIEKYKSMNVGDKLVDVTECLAGRIMTKRAQ 144

Query: 603  SSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTKRGELS 662
            SSKLLFYDL+G G K+QV  DAR SEL++ EF +FH  +KRGDIVGV G+PGK+KRGELS
Sbjct: 145  SSKLLFYDLYGGGEKVQVFADARTSELEDNEFIKFHSTLKRGDIVGVCGYPGKSKRGELS 204

Query: 663  IFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPETYILKDQETRYRQRY 722
            IFPK  +VLS CLHMMPRQK ++GS          W PG  RN E Y+L+DQETRYRQRY
Sbjct: 205  IFPKKIVVLSPCLHMMPRQK-SEGSAVPT-----PWAPGMGRNIEKYVLRDQETRYRQRY 264

Query: 723  LDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARPFVTFHNDLN 782
            LDLM+N EVR IFKTR+KV+ ++RKFLD LDFLEVETPMMNMIAGGAAARPFVT HN+LN
Sbjct: 265  LDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARPFVTHHNELN 324

Query: 783  MKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLM 842
            M+L+MRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMA+ADYNDL+
Sbjct: 325  MRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLI 384

Query: 843  ELTEKMLSGMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRVDMIEELEKMANLDIPKD 902
            ELTE MLSGMVKELTGGYK+KYH+NG++  PIEIDFTPPFR++DMIEELE MA L+IPKD
Sbjct: 385  ELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKD 444

Query: 903  LSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLA 962
            LSSDEANKYL  AC K+++KCPPP+TT RLLDKLVGHFLEETCVNP FIINHPEIMSPLA
Sbjct: 445  LSSDEANKYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLA 504

Query: 963  KWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETF 1022
            KWHR+RP LTERFELF+NKHEVCNAYTELNDPVVQRQRF EQLKDRQSGDDEAMALDETF
Sbjct: 505  KWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETF 564

Query: 1023 CTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQD 1063
            CTALEYGLPPTGGWG+GIDRL MLLTDSQNIKEVLLFPAMKPQD
Sbjct: 565  CTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQD 602

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BLAST of CmaCh05G006930 vs. ExPASy Swiss-Prot
Match: Q43776 (Lysine--tRNA ligase OS=Solanum lycopersicum OX=4081 GN=LYSRS PE=2 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 4.0e-223
Identity = 371/592 (62.67%), Postives = 474/592 (80.07%), Query Frame = 0


Query: 476  DSAPSAEETISKNARKKELKMKQKEEERRRKEELKEKAKQEASQNKKSVAVDDEEMDPTQ 535
            DS+ S  E +SKNA K+E K K+KE+  + K+      +Q    N      +++++DPTQ
Sbjct: 2    DSSVST-EPLSKNALKREKKAKEKEQLEQEKKAAAVAKRQMEQHN----LPENDDLDPTQ 61

Query: 536  YFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIMSK 595
            Y  NRL+ + S +  G NPYPHKF ++MS+ E+I +Y  LN G+  E++ +SLAGR++SK
Sbjct: 62   YLANRLRNIESLRESGINPYPHKFFITMSIPEFISRYAHLNTGEFPEDIDMSLAGRVISK 121

Query: 596  RSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTKRG 655
            R+SSSKL FY+L G GA++QV+  AR+S++D  +F+ +   VKRGDI+GV G+PGK+KRG
Sbjct: 122  RASSSKLYFYELLGGGARVQVLASARDSDVDAVQFSNYQSGVKRGDIIGVRGYPGKSKRG 181

Query: 656  ELSIFPKSFIVLSHCLHMMPRQKAAQGSENA------NLKKNDAWVPGCTRNPETYILKD 715
            ELSIF K FIVL+ CLHM+PR+  +   +         +   D W PG  RNPE+Y+L+D
Sbjct: 182  ELSIFAKPFIVLAPCLHMLPRRLTSSIVDETRTQNFQGITAYDTWTPGDLRNPESYVLRD 241

Query: 716  QETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARP 775
            QETRYRQRYLDLM+N EVR +F+TRA++I Y+R FLD+L+FLEVETP MN+ AGGA+ARP
Sbjct: 242  QETRYRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPSMNLTAGGASARP 301

Query: 776  FVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYM 835
            F+T HN+L+ +L +R++PELYLK+LVVGG DRVYE+GK FRNEG+DLTH+PEFT CE YM
Sbjct: 302  FITHHNELDTELLIRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDLTHSPEFTMCELYM 361

Query: 836  AFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRVDMIEELEK 895
            A+ADYNDLM+LTE++LSGMVK+LTG YK++YH+NGLDN+PIEIDFTPPFR++DM+ ELEK
Sbjct: 362  AYADYNDLMDLTEQLLSGMVKDLTGSYKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEK 421

Query: 896  MANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIIN 955
            +AN+ IP+DLSS+ ANK+L   C+KF++KCPPP TT RLLDKLVGHF+E  C+NP FIIN
Sbjct: 422  VANISIPRDLSSESANKHLVDVCEKFDVKCPPPHTTTRLLDKLVGHFIEVNCINPTFIIN 481

Query: 956  HPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDD 1015
            HPEIMSPLAK  R+ P LTERF LF+N+ E+C+AYTELNDP  QR+RFAEQLKDRQ GDD
Sbjct: 482  HPEIMSPLAKSRRSEPGLTERFNLFVNRRELCDAYTELNDPTAQRERFAEQLKDRQLGDD 541

Query: 1016 EAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQ 1062
            EAM LDE+F TALEYGLPPTGG GMGIDRL MLLTDSQN+KEV+LFPAM+ Q
Sbjct: 542  EAMDLDESFITALEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPAMRLQ 588

[Close]

BLAST of CmaCh05G006930 vs. ExPASy Swiss-Prot
Match: P37879 (Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 3.5e-195
Identity = 341/592 (57.60%), Postives = 433/592 (73.14%), Query Frame = 0


Query: 482  EETISKNARKKELKMKQK--EEERRRKEELKEKAKQEAS------QNKKSVAVDDEEMDP 541
            E  +SKN  K+ LK ++K  E+E ++KE ++++  Q A+           V V++E +DP
Sbjct: 14   EPKLSKNELKRRLKAEKKLAEKEAKQKELIEKQLSQAAAAAATNHTADNGVGVEEETLDP 73

Query: 542  TQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIM 601
             QY++ R + +   K  G++PYPHKF V +SL ++I++Y  L  GDHL ++ + +AGRI 
Sbjct: 74   NQYYKIRSQAIHQLKVSGEDPYPHKFHVDISLTQFIQEYSQLQPGDHLTDITLKVAGRIH 133

Query: 602  SKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTK 661
            +KR+S  KL+FYDL G G K+QVM ++RN + +E EF R +  ++RGDI+GV G PGKTK
Sbjct: 134  AKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEE-EFVRINNKLRRGDIIGVQGNPGKTK 193

Query: 662  RGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPETYILKDQETR 721
            +GELSI P    +LS CLHM+P                             + LKD+ETR
Sbjct: 194  KGELSIIPYEITLLSPCLHMLPHLH--------------------------FGLKDKETR 253

Query: 722  YRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARPFVTF 781
            YRQRYLDL+LN  VRQ F  RAK+I Y+R FLD+L FLE+ETPMMN+I GGA A+PF+T+
Sbjct: 254  YRQRYLDLILNDFVRQKFIVRAKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITY 313

Query: 782  HNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFAD 841
            HN+L+M L+MRIAPELY K LVVGG+DRVYEIG+QFRNEGIDLTHNPEFTTCEFYMA+AD
Sbjct: 314  HNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD 373

Query: 842  YNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRVDMIEELEKMANL 901
            Y+DLME+TEKMLSGMVK +TG YK+ YH +G + +  EIDFTPPFRR+ M+EELEK   +
Sbjct: 374  YHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGEAYEIDFTPPFRRISMVEELEKALGV 433

Query: 902  DIPKD--LSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHP 961
             +P+     ++E  K L   C    ++CPPP TTARLLDKLVG FLE TC+NP FI +HP
Sbjct: 434  KLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHP 493

Query: 962  EIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEA 1021
            +IMSPLAKWHR++  LTERFELF+ K E+CNAYTELNDP+ QRQ F EQ K + +GDDEA
Sbjct: 494  QIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEA 553

Query: 1022 MALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQDE 1064
            M +DE FCTALEYGLPPT GWGMGIDR+ M LTDS NIKEVLLFPAMKP+D+
Sbjct: 554  MFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMKPEDK 578

[Close]

BLAST of CmaCh05G006930 vs. ExPASy Swiss-Prot
Match: Q99MN1 (Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 3.9e-194
Identity = 342/602 (56.81%), Postives = 435/602 (72.26%), Query Frame = 0


Query: 470  AALDMADSAPSAEETISKNARKKELKMKQK--EEERRRKEELKEKAKQEASQNK----KS 529
            A L  ++     E+ +SKN  K+ LK ++K  E+E ++KE  +++  Q AS         
Sbjct: 2    ATLQESEVKVDGEQKLSKNELKRRLKAEKKLAEKEAKQKELSEKQLNQTASAPNHTADNG 61

Query: 530  VAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEKYGSLNNGDHLEE 589
            V  ++E +DP QY++ R + +   K  G++PYPHKF V +SL ++I++Y  L  GDHL +
Sbjct: 62   VGAEEETLDPNQYYKIRSQAVQQLKVTGEDPYPHKFHVDISLTQFIQEYSHLQPGDHLTD 121

Query: 590  VMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIV 649
            V + +AGRI +KR+S  KL+FYDL G G K+QVM ++RN + +E EF   +  ++RGDI+
Sbjct: 122  VTLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEE-EFVHINNKLRRGDII 181

Query: 650  GVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPE 709
            GV G PGKTK+GELSI P+   +LS CLHM+P                            
Sbjct: 182  GVEGNPGKTKKGELSIIPQEITLLSPCLHMLPHLH------------------------- 241

Query: 710  TYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAG 769
             + LKD+ETRYRQRYLDL+LN  VRQ F  R+K+I Y+R FLD+L FLE+ETPMMN+I G
Sbjct: 242  -FGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPG 301

Query: 770  GAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFT 829
            GA A+PF+T+HN+L+M L+MRIAPELY K LVVGG+DRVYEIG+QFRNEGIDLTHNPEFT
Sbjct: 302  GAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFT 361

Query: 830  TCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRVDM 889
            TCEFYMA+ADY+DLME+TEKMLSGMVK +TG YK+ YH +G +    E+DFTPPFRR+ M
Sbjct: 362  TCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEVDFTPPFRRISM 421

Query: 890  IEELEKMANLDIPKD--LSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETC 949
            +EELEK   + +P+     ++E  K L   C    ++CPPP TTARLLDKLVG FLE TC
Sbjct: 422  VEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC 481

Query: 950  VNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQL 1009
            ++P FI +HP+IMSPLAKWHR++  LTERFELF+ K E+CNAYTELNDPV QRQ F EQ 
Sbjct: 482  ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQA 541

Query: 1010 KDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQ 1064
            K + +GDDEAM +DE FCTALEYGLPPT GWGMGIDRL M LTDS NIKEVLLFPAMKP+
Sbjct: 542  KAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPE 576

[Close]

BLAST of CmaCh05G006930 vs. TAIR 10
Match: AT3G11710.1 (lysyl-tRNA synthetase 1 )

HSP 1 Score: 933.3 bits (2411), Expect = 1.8e-271
Identity = 467/620 (75.32%), Postives = 531/620 (85.65%), Query Frame = 0


Query: 449  MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 508
            M  + D   KA+SELA+ S++       SA       SKNA KKE KMKQKEEE+RRK+E
Sbjct: 1    MEGAADQTTKALSELAMDSSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDE 60

Query: 509  LK-EKAKQ-EASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLL 568
             K EKAKQ   + ++K+VA DDEEMD TQY+ENRLKYLA++KA G+NPYPHKF VSMS+ 
Sbjct: 61   EKAEKAKQAPKASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIP 120

Query: 569  EYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELD 628
            +YIE YGSLNNGDH+E    SLAGRIMSKRSSSSKL FYDLHG   K+QVM DA  S LD
Sbjct: 121  KYIETYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLD 180

Query: 629  EAEFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENA 688
            EAEF + H   KRGDIVGV GFPGKTKRGELSIFP+SFI+LSHCLHMMPR+     ++N 
Sbjct: 181  EAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRK-----ADNV 240

Query: 689  NLKKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLD 748
            N KK + WVPG TRNPE Y+LKDQE+RYRQR+LD++LN+EVRQIF+TRAK+I YVR+FLD
Sbjct: 241  NAKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLD 300

Query: 749  DLDFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIG 808
            + +FLEVETPMMNMIAGGAAARPFVT HNDL+M+L+MRIAPELYLK+L+VGGL+RVYEIG
Sbjct: 301  NKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIG 360

Query: 809  KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLD 868
            KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLME+TE MLSGMVKELTGGYK+KY++NG D
Sbjct: 361  KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYD 420

Query: 869  NDPIEIDFTPPFRRVDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTA 928
             DPIEIDFTPPFRR++MI ELEK+A L+IPKDL+S+EANKYL  AC +F++KCPPP+TTA
Sbjct: 421  KDPIEIDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTA 480

Query: 929  RLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTE 988
            RLLDKLVG FLE TCVNP FIIN PEIMSPLAKWHR++  LTERFELFINKHE+CNAYTE
Sbjct: 481  RLLDKLVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTE 540

Query: 989  LNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDS 1048
            LNDPVVQRQRFA+QLKDRQSGDDEAMALDETFC ALEYGL PTGGWG+GIDRL+MLLTDS
Sbjct: 541  LNDPVVQRQRFADQLKDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLSMLLTDS 600

Query: 1049 QNIKEVLLFPAMKPQDEPPA 1067
             NIKEVL FPAM+P  E  A
Sbjct: 601  LNIKEVLFFPAMRPPQEESA 615

[Close]

BLAST of CmaCh05G006930 vs. TAIR 10
Match: AT2G18950.1 (homogentisate phytyltransferase 1 )

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-130
Identity = 242/335 (72.24%), Postives = 287/335 (85.67%), Query Frame = 0


Query: 73  KKDNRIQIRNAASNQP--FESESEVLHSKNYGDSVKSFLDAFYRFSRPHTVIGTALSIVS 132
           K  +R ++ NA + QP  F+S S+    K++ DS    LDAFYRFSRPHTVIGT LSI+S
Sbjct: 67  KHKSRFRV-NATAGQPEAFDSNSK---QKSFRDS----LDAFYRFSRPHTVIGTVLSILS 126

Query: 133 VSLLAVEKLSDLSPLFLTGFLEAIVAALFMNIYIVGLNQLFDIEIDKINKPYLPLASGEY 192
           VS LAVEK+SD+SPL  TG LEA+VAAL MNIYIVGLNQL D+EIDK+NKPYLPLASGEY
Sbjct: 127 VSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEY 186

Query: 193 SFGTGVAIVFTFSILSFWLGWVVRSWPLFWALLISFILGTAYSIDLPLLRWKRFAVVAAM 252
           S  TG+AIV +FSI+SFWLGW+V SWPLFWAL +SF+LGTAYSI+LPLLRWKRFA+VAAM
Sbjct: 187 SVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAM 246

Query: 253 CILAVRAVIVQLAFFLHMQTHVFQRPPVFSRSLIFATAFMSFFSVVIALFKDIPDIDGDK 312
           CILAVRA+IVQ+AF+LH+QTHVF RP +F+R LIFATAFMSFFSVVIALFKDIPDI+GDK
Sbjct: 247 CILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDK 306

Query: 313 IFGIRSFTVRLGQERVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVLWI 372
           IFGIRSF+V LGQ+RVFW+C++LL++AY+ A+LVG  S   WSK ++VVGH+ LA+ LW 
Sbjct: 307 IFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWA 366

Query: 373 RAKSVDLKSKAAITSFYMFIWKLFYAEYLLIPFVR 406
           RAKSVDL SK  ITS YMFIWKLFYAEYLL+PF++
Sbjct: 367 RAKSVDLSSKTEITSCYMFIWKLFYAEYLLLPFLK 393

[Close]

BLAST of CmaCh05G006930 vs. TAIR 10
Match: AT3G13490.1 (Lysyl-tRNA synthetase, class II )

HSP 1 Score: 335.5 bits (859), Expect = 1.7e-91
Identity = 205/580 (35.34%), Postives = 310/580 (53.45%), Query Frame = 0


Query: 512  KAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEYIEK 571
            +  + + +N++S +  +   D       RLK +   +  G  PY +K++ S S  +  E 
Sbjct: 60   ETSKPSGRNRRSASSSNSTSDREAIRSIRLKKVEELRGQGLEPYAYKWEKSHSANQLQEI 119

Query: 572  YGSLNNGDHLEEVM--VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAE 631
            Y  L NG+  +  +  VS+AGR++++R +  KL F  L      IQ+  +     L + +
Sbjct: 120  YKHLANGEESDNEIDCVSIAGRVVARR-AFGKLAFLTLRDDSGTIQLYCE--KERLSDDQ 179

Query: 632  FARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLK 691
            F +    +  GDI+G +G   +T++GELSI   SF +L+  L  +P              
Sbjct: 180  FEQLKQFIDIGDILGASGSMKRTEKGELSICVNSFSILTKSLLPLP-------------- 239

Query: 692  KNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLD 751
                         + + L D + RYRQRY+D++ N EV  +F+ RAK++  +RK ++   
Sbjct: 240  ------------DKYHGLTDIDKRYRQRYVDMIANPEVADVFRRRAKIVSEIRKTVESFG 299

Query: 752  FLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQF 811
            +LEVETP++   AGGA ARPFVTFHN L   L++RIA EL+LK ++VGG ++VYEIG+ F
Sbjct: 300  YLEVETPVLQGAAGGAEARPFVTFHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIF 359

Query: 812  RNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNDP 871
            RNEGI   HNPEFTT E Y A++DY+ +M++ E +++     + G   + Y         
Sbjct: 360  RNEGISTRHNPEFTTIEMYEAYSDYHSMMDMAELIVTQCSMAVNGKLTIDYQGT------ 419

Query: 872  IEIDFTPPFRRVDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARLL 931
             EI    P+RR  M   ++++  ++   +L  D  N          ++  P  ++  R  
Sbjct: 420  -EICLERPWRRETMHNLVKEITGINF-SELGEDLGNAKDTVLLALQDVLEPKDKSGIRAC 479

Query: 932  DKLVGHFLEE--------TCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVC 991
              L GH L E          V P F++++P  +SPLAK HR    LTERFELFI   E+ 
Sbjct: 480  SSL-GHLLNEIFEVVVEPKLVQPTFVLDYPIEISPLAKPHRGNAGLTERFELFICGREMA 539

Query: 992  NAYTELNDPVVQRQRFAEQLKD------------------RQSGDDEA--MALDETFCTA 1051
            NA++EL DPV QR R  EQ++                   +   DDE+  + LDE F TA
Sbjct: 540  NAFSELTDPVDQRTRLEEQVRQHNAKRAEAVRESPEPNAKKDDDDDESYEVTLDEDFLTA 599

Query: 1052 LEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQ 1062
            LEYG+PP  G G+GIDRL MLLT+S +I++V+ FP +K Q
Sbjct: 600  LEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKLQ 601

[Close]

BLAST of CmaCh05G006930 vs. TAIR 10
Match: AT3G11945.1 (homogentisate prenyltransferase )

HSP 1 Score: 156.0 bits (393), Expect = 1.8e-37
Identity = 119/345 (34.49%), Postives = 179/345 (51.88%), Query Frame = 0


Query: 70  FCQKKDNRIQIRNAASNQPFESESEVLHSKNYGDSVKSFLDAFYRFSRPHTVIGTAL-SI 129
           F      +I IR  +     ES+  VL      D +  F +A +RF RPHT+ GTAL S 
Sbjct: 58  FVSTNYRKISIRACSQVGAAESDDPVL------DRIARFQNACWRFLRPHTIRGTALGST 117

Query: 130 VSVSLLAVEKLSDLSPLFLTGFLEAIVAALFMNIYIVGLNQLFDIEIDKINKPYLPLASG 189
             V+   +E    +    +   L  ++A +  N YIVG+NQ++DI IDK+NKPYLP+A+G
Sbjct: 118 ALVTRALIENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAG 177

Query: 190 EYSFGTGVAIVFTFSI-----LSFWLGWVVRSWPLFWALLISFILGTAYSIDLPLLRWKR 249
           + S  +   +V  F+I     + F  G  + S        +   LGT YS+  P LR KR
Sbjct: 178 DLSVQSAWLLVIFFAIAGLLVVGFNFGPFITS-----LYSLGLFLGTIYSV--PPLRMKR 237

Query: 250 FAVVAAMCILAVRAVIVQLAFFLHMQTHVFQRPPVFSRSLIFATAFMSFFSVVIALFKDI 309
           F V A + I  VR  ++    + H        P  +S  + F T+F++ F++VIA+ KD+
Sbjct: 238 FPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDL 297

Query: 310 PDIDGDKIFGIRSFTVRLGQERVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHIT 369
           PD++GD+ F I +   +LG   + +    LL V Y +A+ +       +   L +  H+ 
Sbjct: 298 PDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVI 357

Query: 370 LASVL----WIRAKSVDLKSKAAITSFYMFIWKLFYAEYLLIPFV 405
           LAS L    W+  K+    +K AI+ +Y FIW LFYAEYLL PF+
Sbjct: 358 LASGLIFQTWVLEKA--NYTKEAISGYYRFIWNLFYAEYLLFPFL 386

[Close]

BLAST of CmaCh05G006930 vs. TAIR 10
Match: AT3G11945.2 (homogentisate prenyltransferase )

HSP 1 Score: 154.1 bits (388), Expect = 6.9e-37
Identity = 115/325 (35.38%), Postives = 173/325 (53.23%), Query Frame = 0


Query: 90  ESESEVLHSKNYGDSVKSFLDAFYRFSRPHTVIGTAL-SIVSVSLLAVEKLSDLSPLFLT 149
           ES+  VL      D +  F +A +RF RPHT+ GTAL S   V+   +E    +    + 
Sbjct: 85  ESDDPVL------DRIARFQNACWRFLRPHTIRGTALGSTALVTRALIENTHLIKWSLVL 144

Query: 150 GFLEAIVAALFMNIYIVGLNQLFDIEIDKINKPYLPLASGEYSFGTGVAIVFTFSI---- 209
             L  ++A +  N YIVG+NQ++DI IDK+NKPYLP+A+G+ S  +   +V  F+I    
Sbjct: 145 KALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLL 204

Query: 210 -LSFWLGWVVRSWPLFWALLISFILGTAYSIDLPLLRWKRFAVVAAMCILAVRAVIVQLA 269
            + F  G  + S        +   LGT YS+  P LR KRF V A + I  VR  ++   
Sbjct: 205 VVGFNFGPFITS-----LYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFG 264

Query: 270 FFLHMQTHVFQRPPVFSRSLIFATAFMSFFSVVIALFKDIPDIDGDKIFGIRSFTVRLGQ 329
            + H        P  +S  + F T+F++ F++VIA+ KD+PD++GD+ F I +   +LG 
Sbjct: 265 VY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGV 324

Query: 330 ERVFWSCISLLEVAYSAAVLVGVASSSPWSKWLTVVGHITLASVL----WIRAKSVDLKS 389
             + +    LL V Y +A+ +       +   L +  H+ LAS L    W+  K+    +
Sbjct: 325 RNIAFLGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKA--NYT 384

Query: 390 KAAITSFYMFIWKLFYAEYLLIPFV 405
           K AI+ +Y FIW LFYAEYLL PF+
Sbjct: 385 KEAISGYYRFIWNLFYAEYLLFPFL 393

The following BLAST results are available for this feature:

BLAST of CmaCh05G006930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPI1	2.6e-270	75.32	Lysine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At3g11710 PE...	[more]
Q6F2U9	1.7e-261	76.37	Lysine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0586800 PE=...	[more]
Q43776	4.0e-223	62.67	Lysine--tRNA ligase OS=Solanum lycopersicum OX=4081 GN=LYSRS PE=2 SV=1	[more]
P37879	3.5e-195	57.60	Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1	[more]
Q99MN1	3.9e-194	56.81	Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 SV=1	[more]

BLAST of CmaCh05G006930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11710.1	1.8e-271	75.32	lysyl-tRNA synthetase 1	[more]
AT2G18950.1	1.4e-130	72.24	homogentisate phytyltransferase 1	[more]
AT3G13490.1	1.7e-91	35.34	Lysyl-tRNA synthetase, class II	[more]
AT3G11945.1	1.8e-37	34.49	homogentisate prenyltransferase	[more]
AT3G11945.2	6.9e-37	35.38	homogentisate prenyltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 482..523
None	No IPR available	GENE3D	2.40.50.140		coord: 534..676 e-value: 1.4E-48 score: 166.4
None	No IPR available	GENE3D	3.30.930.10	Bira Bifunctional Protein; Domain 2	coord: 705..1070 e-value: 3.2E-146 score: 489.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..531
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..531
None	No IPR available	PANTHER	PTHR42918:SF14	LYSINE--TRNA LIGASE	coord: 453..1072
None	No IPR available	PANTHER	PTHR42918	LYSYL-TRNA SYNTHETASE	coord: 453..1072
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 709..1059
IPR018149	Lysyl-tRNA synthetase, class II, C-terminal	PRINTS	PR00982	TRNASYNTHLYS	coord: 746..756 score: 63.64 coord: 791..804 score: 68.25 coord: 943..959 score: 54.03 coord: 809..826 score: 78.4 coord: 762..778 score: 63.4
IPR018149	Lysyl-tRNA synthetase, class II, C-terminal	CDD	cd00775	LysRS_core	coord: 724..1060 e-value: 0.0 score: 597.644
IPR044878	UbiA prenyltransferase superfamily	GENE3D	1.10.357.140	UbiA prenyltransferase	coord: 115..271 e-value: 2.0E-15 score: 58.7
IPR000537	UbiA prenyltransferase family	PFAM	PF01040	UbiA	coord: 134..393 e-value: 7.5E-39 score: 133.6
IPR002313	Lysine-tRNA ligase, class II	TIGRFAM	TIGR00499	TIGR00499	coord: 701..1061 e-value: 1.4E-153 score: 510.0
IPR002313	Lysine-tRNA ligase, class II	HAMAP	MF_00252	Lys_tRNA_synth_class2	coord: 539..1063 score: 37.487614
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 586..664 e-value: 4.1E-12 score: 45.9
IPR004364	Aminoacyl-tRNA synthetase, class II (D/K/N)	PFAM	PF00152	tRNA-synt_2	coord: 709..1058 e-value: 1.3E-82 score: 277.4
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 731..1060 score: 25.652626
IPR044136	Lysine-tRNA ligase, class II, N-terminal	CDD	cd04322	LysRS_N	coord: 586..721 e-value: 8.04052E-41 score: 143.772
IPR044502	Homogentisate solanesyltransferase AtHST-like	CDD	cd13960	PT_UbiA_HPT1	coord: 112..402 e-value: 4.6144E-160 score: 474.745
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 530..675

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G006930.1	CmaCh05G006930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0006430	lysyl-tRNA aminoacylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004824	lysine-tRNA ligase activity
molecular_function	GO:0004659	prenyltransferase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups