CmaCh05G006670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G006670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CASP-like protein
Location	Cma_Chr05: 3429483 .. 3430960 (-)
RNA-Seq Expression	CmaCh05G006670
Synteny	CmaCh05G006670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCCCTTCCTTTTGAATAAGTGGTGTACGTGCTGTGCCCAACCAGATATCATAAATAAAGGCACCACCCGACTGCCCTCTCAATATTCTGAACAACAAGTGGCAGTAATGGGGTTTGGGGATGCAAGAACTGAAGGGATACTCAGATTGTGTGCCATGATTTGCTTGGTTTTCACAGTTTTCTTGATGGGTTTTGACAAGGAAACCACACAGATCTTTGGAGCGGACAAGACAGCCTCTTTCAAAAGTTTGGGTGCTCTCAAGTAAGCCCTTTAAATCATCAAGCTTTGTTTGTTTGTTTGTTTGTTTGTGTTTTGAATTTGGGTGTAACTTTACAGAGTGATTATGTATGTGGACTCCATCGCAGCTGCCTACAACATTCTTCAACTCTCCAAATGTTGGATTTCAGCTCACCCAAAACCACCCTTCCAATTACAAACTCACTTTCACTTACCCCTATTTTGGCTTTCCTTCCTCATCGATCAGGTAAACAATTCGATAACATATCATATTGTCTTTTTCGAACTTTTGCTCAAAGTTTTTAAAGGGTGTCTAAGGGAAGTTTTCATACCCATATAAAAATATATTTAAACAATGTTTCCTTCTAGGAGAGGAATCTCACATTTTATAACCTTAATTTTTAAAATTCAAATAAATAGTAAATAATACTATTTTGGACCTTGTATTTTCAATTTTTGTCTAATTTTGGTCCTCCATTTTAATTCTTATATTTTTTAAAGGTCTATTTTGGTCTTTTCACTTTCATTTTATTTCTTTTATCATAATTCAAAGGTAGGCTTAAATTTATTTTGGGTTATGAAATTATATTAAAGTTTTGCAAATAAGGATAAAATGATCACTTTTTACAAAAATATATATATTTCACATAAATAATATCATATGATATGTCCAATTATGCCCCCAAACTATTTTCCTTTTTCTTTTTTTCTTACATATATATATATAAATAATTAGAAAAGTTGGTTTAAAAATTTAGATTGGAATTGAAGTAGTTTGAACTGACATCGGCAGGCGGGTGCTTACCTAACATTTGCGGCAAACACGGCGGGGATAGAGGCGGCGTTTGTGGCGGTGAGGGGCAACCAGGAGTTCCAGTGGATGAAGCTATGCAACAGATTCCACAGATTTTGCTACCAAGCTGCCGGAGCTTTCCTTTGTGGCTATGCAGCTTTCCTTACAATGCTTCTCATCTCCTTCCTCTCTGCTTTCAACTTGTTTAAGCATTATTCACCAAACCATTTCCTGCACCTCAAATCCAACTACTGAATTCTTCTCCTTTTCTCTTAACCTTCCAACATTTGTGTACTTGTGTCTACAAGTTTAGGTTAGTTAGCGTATTGTAATGTCTACGTGTGCGCCCGGTTCGACTTACATAACCTTATTGTTAGTACGGGTGTATAACTATGAAGAACTTGTTTTATTTAAATTGAGAATAAGATATGAGTTTATTAAACCG

mRNA sequence

GTTCCCCTTCCTTTTGAATAAGTGGTGTACGTGCTGTGCCCAACCAGATATCATAAATAAAGGCACCACCCGACTGCCCTCTCAATATTCTGAACAACAAGTGGCAGTAATGGGGTTTGGGGATGCAAGAACTGAAGGGATACTCAGATTGTGTGCCATGATTTGCTTGGTTTTCACAGTTTTCTTGATGGGTTTTGACAAGGAAACCACACAGATCTTTGGAGCGGACAAGACAGCCTCTTTCAAAAGTTTGGGTGCTCTCAAAGTGATTATGTATGTGGACTCCATCGCAGCTGCCTACAACATTCTTCAACTCTCCAAATGTTGGATTTCAGCTCACCCAAAACCACCCTTCCAATTACAAACTCACTTTCACTTACCCCTATTTTGGCTTTCCTTCCTCATCGATCAGGCGGGTGCTTACCTAACATTTGCGGCAAACACGGCGGGGATAGAGGCGGCGTTTGTGGCGGTGAGGGGCAACCAGGAGTTCCAGTGGATGAAGCTATGCAACAGATTCCACAGATTTTGCTACCAAGCTGCCGGAGCTTTCCTTTGTGGCTATGCAGCTTTCCTTACAATGCTTCTCATCTCCTTCCTCTCTGCTTTCAACTTGTTTAAGCATTATTCACCAAACCATTTCCTGCACCTCAAATCCAACTACTGAATTCTTCTCCTTTTCTCTTAACCTTCCAACATTTGTGTACTTGTGTCTACAAGTTTAGGTTAGTTAGCGTATTGTAATGTCTACGTGTGCGCCCGGTTCGACTTACATAACCTTATTGTTAGTACGGGTGTATAACTATGAAGAACTTGTTTTATTTAAATTGAGAATAAGATATGAGTTTATTAAACCG

Coding sequence (CDS)

ATGGGGTTTGGGGATGCAAGAACTGAAGGGATACTCAGATTGTGTGCCATGATTTGCTTGGTTTTCACAGTTTTCTTGATGGGTTTTGACAAGGAAACCACACAGATCTTTGGAGCGGACAAGACAGCCTCTTTCAAAAGTTTGGGTGCTCTCAAAGTGATTATGTATGTGGACTCCATCGCAGCTGCCTACAACATTCTTCAACTCTCCAAATGTTGGATTTCAGCTCACCCAAAACCACCCTTCCAATTACAAACTCACTTTCACTTACCCCTATTTTGGCTTTCCTTCCTCATCGATCAGGCGGGTGCTTACCTAACATTTGCGGCAAACACGGCGGGGATAGAGGCGGCGTTTGTGGCGGTGAGGGGCAACCAGGAGTTCCAGTGGATGAAGCTATGCAACAGATTCCACAGATTTTGCTACCAAGCTGCCGGAGCTTTCCTTTGTGGCTATGCAGCTTTCCTTACAATGCTTCTCATCTCCTTCCTCTCTGCTTTCAACTTGTTTAAGCATTATTCACCAAACCATTTCCTGCACCTCAAATCCAACTACTGA

Protein sequence

MGFGDARTEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNILQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLHLKSNY

Homology

[Close]

BLAST of CmaCh05G006670 vs. ExPASy Swiss-Prot
Match: A7Q6G6 (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.6e-42
Identity = 92/182 (50.55%), Postives = 121/182 (66.48%), Query Frame = 0


Query: 2   GFGDARTEGILRLCAMICLVFTVFLMGFDKETTQIFGA-DKTASFKSLGALKVIMYVDSI 61
           G   AR E  LRL A++ LV T  L+GFD +T  +F    KTA+F+ LGAL+V++YVDS+
Sbjct: 25  GISLARAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSV 84

Query: 62  AAAYNILQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFV 121
           AA YN+LQL + +ISA  K      ++  LP  W+ FL+DQA  Y  F+ANTA ++A+ +
Sbjct: 85  AAGYNLLQLGRGFISAKLKGKLINVSYVTLP--WVCFLLDQAAVYTVFSANTAALQASII 144

Query: 122 AVRGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLH 181
           AV G    QWMK+CNR+ RFC Q  GA L GY A L M+L+S LSAF+LF+ YSP  F  
Sbjct: 145 AVTGESSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHL 204

Query: 182 LK 183
           LK
Sbjct: 205 LK 204

[Close]

BLAST of CmaCh05G006670 vs. ExPASy Swiss-Prot
Match: B9IM09 (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 84/176 (47.73%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 7   RTEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNI 66
           + E ILR  A++ LV T  L+G D +T  +   +K  ++K L AL V++YVD++AAAYN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQ 126
           LQL +C +SA  K  F+    +   L W  F++DQ  AY TFAA++A ++ + + + G +
Sbjct: 67  LQLCRCSVSALSKGNFKGSYRY---LSWACFVLDQLAAYTTFAAHSAALQHSVLGITGAK 126

Query: 127 EFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLHLK 183
            FQWMK CNRF RFC+Q  GA  CGY A + M++ISF+SAFNLF+ YSP HFL LK
Sbjct: 127 VFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

[Close]

BLAST of CmaCh05G006670 vs. ExPASy Swiss-Prot
Match: Q5K4H9 (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-36
Identity = 80/176 (45.45%), Postives = 112/176 (63.64%), Query Frame = 0


Query: 7   RTEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNI 66
           + E ++RL  ++ LV T  L+G D +T  IF   K ASFK L AL  ++Y+ S+AAAYN+
Sbjct: 7   KIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYNL 66

Query: 67  LQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQ 126
           LQL     SA  K    LQ++ +L   WL +++DQA  Y  FA N A +E +F+ + G +
Sbjct: 67  LQLCCSSFSASYKGT-SLQSYAYLA--WLRYILDQAVVYAVFAGNLAALEHSFLVLTGEE 126

Query: 127 EFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLHLK 183
            FQW+K CN++ RFC Q  G+ LCG+ A L M  I+ +SAFNLF+ YSP  F+HLK
Sbjct: 127 NFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

[Close]

BLAST of CmaCh05G006670 vs. ExPASy Swiss-Prot
Match: C6SZ04 (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.7e-35
Identity = 82/186 (44.09%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 1   MGFGDARTEGILRLCAMICLVFTVFLMGFDKETTQIF-GADKTASFKSLGALKVIMYVDS 60
           M  G AR E  LR+ A++ LV T  L+  D +T  +F   +K A++K L ALK+++YV  
Sbjct: 1   MKLGMARGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTC 60

Query: 61  IAAAYNILQLSK--CWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEA 120
            AA YN+L L K   W   + K  +       L + W+ F +DQ   Y+TFAANTA + A
Sbjct: 61  AAAGYNLLLLCKHSIWSRKNFKGSY-------LCMAWICFSLDQIAVYMTFAANTATMGA 120

Query: 121 AFVAVRGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNH 180
           A +A+ G++ FQW+K+C++F RFC +  GA LCGYAA + M LIS +SA+ +F+ YSP  
Sbjct: 121 AVLAISGSEAFQWLKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKW 179

Query: 181 FLHLKS 184
           FL LKS
Sbjct: 181 FLRLKS 179

[Close]

BLAST of CmaCh05G006670 vs. ExPASy Swiss-Prot
Match: Q8L8U9 (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 8   TEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNIL 67
           TE ILRLC +  L+ T  L+G D +T +I    K  SF+ L AL+  +Y+D + AAYN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQE 127
           QL   W +   K              W S+L+DQ  AY+ FA  +A  + + + V G++E
Sbjct: 67  QLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRE 126

Query: 128 FQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLHLKSN 185
            QWMK C +F RFC+Q   A +  Y A   M+L+S +SAFNLF+ YSP  F   KS+
Sbjct: 127 LQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of CmaCh05G006670 vs. TAIR 10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 8   TEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNIL 67
           TE ILRLC +  L+ T  L+G D +T +I    K  SF+ L AL+  +Y+D + AAYN++
Sbjct: 7   TEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYNLV 66

Query: 68  QLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQE 127
           QL   W +   K              W S+L+DQ  AY+ FA  +A  + + + V G++E
Sbjct: 67  QLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRE 126

Query: 128 FQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHYSPNHFLHLKSN 185
            QWMK C +F RFC+Q   A +  Y A   M+L+S +SAFNLF+ YSP  F   KS+
Sbjct: 127 LQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of CmaCh05G006670 vs. TAIR 10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19
Identity = 57/166 (34.34%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 8   TEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNIL 67
           TE ILR    +  +    L+  D +  +IF   K A F  + AL +++ V+ IAA Y+++
Sbjct: 30  TELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLV 89

Query: 68  QLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQE 127
           Q  +C +        + +  F  PL W  F  DQA AYL  A   A  ++A  A  G  E
Sbjct: 90  QAVRCVVGL-----MKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPE 149

Query: 128 FQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHY 174
            QWMK+CN + +FC Q          A + M+LIS +SAF +F+ Y
Sbjct: 150 LQWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLY 190

[Close]

BLAST of CmaCh05G006670 vs. TAIR 10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-18
Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 8   TEGILRLCAMICLVFTVFLMGFDKETTQIFGADKTASFKSLGALKVIMYVDSIAAAYNIL 67
           TE +LR    +  +  + L+  D E   IF   KTA +  + A+  ++  + IAA Y++L
Sbjct: 11  TELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLL 70

Query: 68  QLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAVRGNQE 127
           Q  +C +        + +  F  PL W  F  DQA AYL  AA  A  E+  +A  G ++
Sbjct: 71  QSVRCVVGT-----MKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEED 130

Query: 128 FQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFKHY 174
            QWM++C  + +FC Q A        A + M+ +S +SAF+LF+ Y
Sbjct: 131 LQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

[Close]

BLAST of CmaCh05G006670 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 52.8 bits (125), Expect = 3.5e-07
Identity = 43/169 (25.44%), Postives = 78/169 (46.15%), Query Frame = 0


Query: 8   TEGILRLCAMICLVFTVFLMGFDKETTQIF--GAD---KTASFKSLGALKVIMYVDSIAA 67
           T+ +LR       + ++ +M   K+T  IF  G       A F +  AL   +   S+A 
Sbjct: 29  TQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVAC 88

Query: 68  AYNILQLSKCWISAHPKPPFQLQTHFHLPLFWLSFLIDQAGAYLTFAANTAGIEAAFVAV 127
            Y+I+  +   +SA  K         +L       ++D     +  +A  AG   A++ +
Sbjct: 89  FYSIVS-TFVTVSAFKKHSCSAVLLLNLA------IMDAVMVGIVASATGAGGGVAYLGL 148

Query: 128 RGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNLFK 172
           +GN+E +W K+C+ + +FC    GA      A + +LL+S +S  +L+K
Sbjct: 149 KGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

[Close]

BLAST of CmaCh05G006670 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = 0


Query: 12  LRLCAMICLVFTVFLMGFDKET-TQIFG--------ADKTASFKSLGALKVIMYVDSIAA 71
           LRL A    +    +MG +KET T I G        A  TA F    A    +  +++ +
Sbjct: 22  LRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAMVS 81

Query: 72  AYNILQLSKCWISAHPKPPFQLQTHFHLPLFWLSF-LIDQAGAYLTFAANTAGIEAAFVA 131
            +N+L ++        K  F   T F L    LS  ++D     L  AA  A    A V 
Sbjct: 82  FHNLLMIALQIFGG--KMEF---TGFRL----LSVAILDMLNVTLISAAANAAAFMAEVG 141

Query: 132 VRGNQEFQWMKLCNRFHRFCYQAAGAFLCGYAAFLTMLLISFLSAFNL 170
             GN+  +W K+C+RF  +C   AGA +  +A  + ML+IS  S   L
Sbjct: 142 KNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRL 180

The following BLAST results are available for this feature:

BLAST of CmaCh05G006670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7Q6G6	9.6e-42	50.55	CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1	[more]
B9IM09	1.2e-39	47.73	CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S...	[more]
Q5K4H9	2.7e-36	45.45	CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1	[more]
C6SZ04	8.7e-35	44.09	CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q8L8U9	2.2e-30	40.11	CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1	[more]

BLAST of CmaCh05G006670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25830.1	1.6e-31	40.11	Uncharacterised protein family (UPF0497)	[more]
AT2G35760.1	2.3e-19	34.34	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	4.4e-18	32.53	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	3.5e-07	25.44	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.3e-06	30.36	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..168 e-value: 1.3E-26 score: 91.2
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 8..156 e-value: 1.2E-31 score: 109.5
None	No IPR available	PANTHER	PTHR11615:SF241	CASP-LIKE PROTEIN 2C1	coord: 4..183
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G006670.1	CmaCh05G006670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding