CmaCh05G006600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G006600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	tetraspanin-8-like
Location	Cma_Chr05: 3374772 .. 3377382 (+)
RNA-Seq Expression	CmaCh05G006600
Synteny	CmaCh05G006600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTGAAACCTTCCTGAAAAGCAAGGGGAATAGAAATCACGTGGCAATTAATGGTAGCGAGTTTCCAAATTTACAATATTATATAGTCGCTCAAGTTCAGTACCTTCTTCGTCTTCTTTCCCCTTTCTGAAAATTTCTTCCTCTTTTGCTTCCACTCCGATTCTTCCCAATGCCTCGATTCAGCAACAACCTCGTCGGAATCCTCAACTTCATCACCTTCTTACTCTCGATCCCGATTCTCTGGGCCGGCGTTTGGCTCAGCAAACAAGGAAGCACAGAATGCGAGAAGTTCTTAGACAAACCCGTAATCATAATCGGCGTGTTTCTGATGTTGATTTCTCTCGCCGGTCTTCTCGGTGCTTGCTGTAGAATCTCATGGCTTCTATGGGTTTACCTTCTTGTAATGTTTGTTCTTATTGTTATTCTCTTTTCTTTCACCATTTTCGCTTTTGTGGTTACGAACAAGGGCGCCGGTGAGGTCTTGTCGAATCGTGGTTATAAGGAGTATAGGCTTGGGGATTACTCCAGTTGGCTGCAGAAGAGGGTGAATAGTGATAAAAATTGGAACAAAATCAAGAGCTGCTTGATTGATGGGAAGATCTGTTCCAGCTTTGCTGATAAGTATGTTAATGATACTGTTGAACAGTTCTACCAGGAGCATTTGTCTGCTCTTCAGGTATGATGGATTGGAATGAATTCGAGTTTTGGGGAACTTGTTTTATGTTAGAAGTAGAACCTAGTTGTTTGAATTTCGTTTCTGTTTCAACTTGAATCTTTGTTTTGAGCAATTATCTCTGGTTTTGAATTGCAGATCTGTTCGGTTGATCTTTAAGACATATCGATCTCTGTTGTCTTTCTTTCTTTCTTTCTGGTGCTAAATTCAAATTTTGATTGGAATTTTAAATGGGAATCCACAAGCTTGTTGTGTAAAGTTCATCGTAAGGTTATCTGAAACACAGTTTTGTAAAGTAGTATTGTTCTTGATTGTCTATGTTTTTCTGTTCACTTTCTCAAAAAGCTAATGATCTTTAGTTTGGGGGCATCCTTTTAACCAAAAAGGAAATTTGATACTCATATCATCTTTATGCTTTGATATTCATATCATCTTACACAGAAACTTTCTGGGTATAGATCTATCGTCTGGGCACCTCCTTTGAATCAATATTAGTTTGAGAAAATTGAGTTTGCATTTTCCAAATGGACATGGAACTTCTTTGCTGAATACAGAACTGTTTGTGTGCAAGCAAGAGTGGGGGCTTATGATCTTTGCCCATTACAAGCATGTGGTGTTCATAGTTCTCTAATAATGGCACAATTTTAGGCTCTTGAAATTGATTTCTGTAGGAAGATAATGACTTTTGCAATATTGTCAATGATTGTAATGTGACATACCTCTGATAGAAATTTCTATGATTGTCGATGATCGTTCTTGCATCTGGGATCGACCGGTATTCAAGTGGTTTTCGACTTGAATTTTCTTATTTGATTTGTTGTTTTTGAATATCACCAAGTCCTTTTCATATGCTCACCATTTTCCCTCCATTTTTCTAGATCATGGATCATGTTCTTCATTGAATGTGATCAAGTTCTAATGTTCTTTCTTACATGCAGTCTGGTTGCTGTAAACCTTCAAACGACTGCAATTACACTTATGTGAGCCCAATTTTCTGGAACCGGAATGCTACAACCTCGGCCAACCCTGACTGTAATTTGTGGGAGAATGACCCCAATATTCTGTGCTTCAATTGCCAGGCCTGCAAGGCTGGCTTGCTGGATAATATTAAGAGCAACTGGAAGAAGGTTGCTGTTGTGAACATTGTATTCCTTGTCTTTCTCATTATCGTCTACTCCGTTGGCTGCTGCGCTTTTCGGAACAACAGAGAGGACAATGCTTATCATCGTCAATGGAAGTGATCTCAACCCGAACCGATAGTTCTGTAAGCATTCTCTTTGTTTAGCTTGTGTTTTTGTCGATTCCCCTCGTGTATATTGTTATTCCCCTCCCTTTCTGGAGGTCGTGATTTTTTCGTTTGACTTTGATCTGCTGTTTTTATGGACATATTCATGCTGATTGTAGTGCTGACATTGATCATCTCTCTCTCTCTGTCTCTATTCTTCCTTTTTGTGGATGTTGCTTAGATTTCTGGCTACTGCACCATGAAGTTCTGCCATGAAACTTTGATTCTATTTCATGTCTCTTTTTCTCCGTTTTGCTGTTTGTAATGTCTTGGAGATACGAACCAAAACCAAACCAAACTCTTGTAAGACCCAAAGCCCACTGTTAGTAGATATTGTTTTATTTAGATTTTTACATCGAGTTTCTTTTCAAGGTTTTCGCACCCTTATAAAAATGCTTCGTTCCCGTCTCTAACCAACGCGGGATCTCACAACTTAATGACTAAGAGTCCAAATAAAAGCGTTAATCCATAGGTGGACAGATCAATATTGGATGGATAGAACAACATCTCTTTATCATTCACTATATCTCTCTTTTAAGTTCTAATGATTTATGAATTTTTGTAGCCTTACAAATCATAAATTCTGTTCAATATTCGAGACTTAACTTTCTTCCTCAATGTTTCCTTATTTGCTGCAAGCCTCATCATTGG

mRNA sequence

CAAATTGAAACCTTCCTGAAAAGCAAGGGGAATAGAAATCACGTGGCAATTAATGGTAGCGAGTTTCCAAATTTACAATATTATATAGTCGCTCAAGTTCAGTACCTTCTTCGTCTTCTTTCCCCTTTCTGAAAATTTCTTCCTCTTTTGCTTCCACTCCGATTCTTCCCAATGCCTCGATTCAGCAACAACCTCGTCGGAATCCTCAACTTCATCACCTTCTTACTCTCGATCCCGATTCTCTGGGCCGGCGTTTGGCTCAGCAAACAAGGAAGCACAGAATGCGAGAAGTTCTTAGACAAACCCGTAATCATAATCGGCGTGTTTCTGATGTTGATTTCTCTCGCCGGTCTTCTCGGTGCTTGCTGTAGAATCTCATGGCTTCTATGGGTTTACCTTCTTGTAATGTTTGTTCTTATTGTTATTCTCTTTTCTTTCACCATTTTCGCTTTTGTGGTTACGAACAAGGGCGCCGGTGAGGTCTTGTCGAATCGTGGTTATAAGGAGTATAGGCTTGGGGATTACTCCAGTTGGCTGCAGAAGAGGGTGAATAGTGATAAAAATTGGAACAAAATCAAGAGCTGCTTGATTGATGGGAAGATCTGTTCCAGCTTTGCTGATAAGTATGTTAATGATACTGTTGAACAGTTCTACCAGGAGCATTTGTCTGCTCTTCAGTCTGGTTGCTGTAAACCTTCAAACGACTGCAATTACACTTATGTGAGCCCAATTTTCTGGAACCGGAATGCTACAACCTCGGCCAACCCTGACTGTAATTTGTGGGAGAATGACCCCAATATTCTGTGCTTCAATTGCCAGGCCTGCAAGGCTGGCTTGCTGGATAATATTAAGAGCAACTGGAAGAAGGTTGCTGTTGTGAACATTGTATTCCTTGTCTTTCTCATTATCGTCTACTCCGTTGGCTGCTGCGCTTTTCGGAACAACAGAGAGGACAATGCTTATCATCGTCAATGGAAGTGATCTCAACCCGAACCGATAGTTCTGTAAGCATTCTCTTTGTTTAGCTTGTGTTTTTGTCGATTCCCCTCGTGTATATTGTTATTCCCCTCCCTTTCTGGAGGTCGTGATTTTTTCGTTTGACTTTGATCTGCTGTTTTTATGGACATATTCATGCTGATTGTAGTGCTGACATTGATCATCTCTCTCTCTCTGTCTCTATTCTTCCTTTTTGTGGATGTTGCTTAGATTTCTGGCTACTGCACCATGAAGTTCTGCCATGAAACTTTGATTCTATTTCATGTCTCTTTTTCTCCGTTTTGCTGTTTGTAATGTCTTGGAGATACGAACCAAAACCAAACCAAACTCTTGTAAGACCCAAAGCCCACTGTTAGTAGATATTGTTTTATTTAGATTTTTACATCGAGTTTCTTTTCAAGGTTTTCGCACCCTTATAAAAATGCTTCGTTCCCGTCTCTAACCAACGCGGGATCTCACAACTTAATGACTAAGAGTCCAAATAAAAGCGTTAATCCATAGGTGGACAGATCAATATTGGATGGATAGAACAACATCTCTTTATCATTCACTATATCTCTCTTTTAAGTTCTAATGATTTATGAATTTTTGTAGCCTTACAAATCATAAATTCTGTTCAATATTCGAGACTTAACTTTCTTCCTCAATGTTTCCTTATTTGCTGCAAGCCTCATCATTGG

Coding sequence (CDS)

ATGCCTCGATTCAGCAACAACCTCGTCGGAATCCTCAACTTCATCACCTTCTTACTCTCGATCCCGATTCTCTGGGCCGGCGTTTGGCTCAGCAAACAAGGAAGCACAGAATGCGAGAAGTTCTTAGACAAACCCGTAATCATAATCGGCGTGTTTCTGATGTTGATTTCTCTCGCCGGTCTTCTCGGTGCTTGCTGTAGAATCTCATGGCTTCTATGGGTTTACCTTCTTGTAATGTTTGTTCTTATTGTTATTCTCTTTTCTTTCACCATTTTCGCTTTTGTGGTTACGAACAAGGGCGCCGGTGAGGTCTTGTCGAATCGTGGTTATAAGGAGTATAGGCTTGGGGATTACTCCAGTTGGCTGCAGAAGAGGGTGAATAGTGATAAAAATTGGAACAAAATCAAGAGCTGCTTGATTGATGGGAAGATCTGTTCCAGCTTTGCTGATAAGTATGTTAATGATACTGTTGAACAGTTCTACCAGGAGCATTTGTCTGCTCTTCAGTCTGGTTGCTGTAAACCTTCAAACGACTGCAATTACACTTATGTGAGCCCAATTTTCTGGAACCGGAATGCTACAACCTCGGCCAACCCTGACTGTAATTTGTGGGAGAATGACCCCAATATTCTGTGCTTCAATTGCCAGGCCTGCAAGGCTGGCTTGCTGGATAATATTAAGAGCAACTGGAAGAAGGTTGCTGTTGTGAACATTGTATTCCTTGTCTTTCTCATTATCGTCTACTCCGTTGGCTGCTGCGCTTTTCGGAACAACAGAGAGGACAATGCTTATCATCGTCAATGGAAGTGA

Protein sequence

MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAGLLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSSWLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCNYTYVSPIFWNRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIVFLVFLIIVYSVGCCAFRNNREDNAYHRQWK

Homology

[Close]

BLAST of CmaCh05G006600 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-111
Identity = 182/269 (67.66%), Postives = 227/269 (84.39%), Query Frame = 0


Query: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60
           M R SNNLVGILNF+ FLLSIPIL  G+WLS++GSTECE+FLDKPVI +GVFLM++++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120
           L+G+CCR++WLLWVYL VMF+LI+++F  T+FAFVVTNKGAGE +  +GYKEY+LGDYS+
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180
           WLQKRV + KNWNKI+SCL++ K+CS    K+VN  V  FY+EHL+ALQSGCCKPS++C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 181 YTYVSPIFWNRNAT-TSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIV 240
           + YV+P  W +N T T  NPDC  W+N    LCF+CQ+CKAGLLDN+KS WKKVA+VNIV
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

Query: 241 FLVFLIIVYSVGCCAFRNNREDNAYHRQW 269
           FLVFLIIVYSVGCCAFRNN+ D++Y R +
Sbjct: 241 FLVFLIIVYSVGCCAFRNNKRDDSYSRTY 269

[Close]

BLAST of CmaCh05G006600 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-104
Identity = 171/260 (65.77%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60
           M + SNNL+GILNF TFLLSIPIL AG+WL K  +TECE+FLDKP++++G+FLM +S+AG
Sbjct: 1   MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120
           L+GACCR+S LLW+YL  MF+LI++ F FTIFAF VTN+GAGEV+S+RGYKEY + DYS+
Sbjct: 61  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120

Query: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180
           WLQKRVN+ KNW +I+SCL+   +CS++  +Y +  VE FY+ +L+ALQSGCCKPSNDCN
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180

Query: 181 YTYVSPIFWNRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIVF 240
           +TYV+P  W +      N DCN+W+N P  LC++C+ACKAGLLDNIK++WKKVA VNIVF
Sbjct: 181 FTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240

Query: 241 LVFLIIVYSVGCCAFRNNRE 261
           L+FLIIVYSVGCCAFRNNR+
Sbjct: 241 LIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of CmaCh05G006600 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-97
Identity = 157/261 (60.15%), Postives = 210/261 (80.46%), Query Frame = 0


Query: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60
           M RFSN+LVGILNF  FLLS+PIL  G+WLS + +T+CE+FLDKP+I +GVFLM+I++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120
           ++G+CCR++WLLW YL VMF LI+I+  FTIFAFVVT+KG+GE +  + YKEYRL  YS 
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180
           WLQ+RVN+ K+WN I+SCL + K C +      N TV  FY+E L+A +SGCCKPSNDC+
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180

Query: 181 YTYVSPIFWNRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIVF 240
           +TY++   WN+ + T  N DC LW+N+ + LC+NC+ACKAG LDN+K+ WK+VA+VNI+F
Sbjct: 181 FTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIF 240

Query: 241 LVFLIIVYSVGCCAFRNNRED 262
           LV L++VY++GCCAFRNN+ED
Sbjct: 241 LVLLVVVYAMGCCAFRNNKED 261

[Close]

BLAST of CmaCh05G006600 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-69
Identity = 126/265 (47.55%), Postives = 180/265 (67.92%), Query Frame = 0


Query: 3   RFSNNLVGILNFITFLLSIPILWAGVWL-SKQGSTECEKFLDKPVIIIGVFLMLISLAGL 62
           R SN+L+G++NF+TFLLSIPIL  G+WL S+  ST+C +FL  P+I+IG+ +M++SLAG 
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  LGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSSW 122
            GAC R  +L+W+YL+VM ++I  L  F IFA+ VT+KG+G  + NRGY +Y L DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 123 LQKRVNSDKNWNKIKSCLIDGKICSSFADKY--VNDTVEQFYQEHLSALQSGCCKPSNDC 182
           L+ RV+ D  W KI SCL D   C      +  V +T + F+   LS ++SGCCKP  DC
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181

Query: 183 NYTYVSPIFWN-RNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNI 242
            ++YV+   W+ R      N DC +W ND ++LC+ C +CKAG+L ++K +W+KV+V+NI
Sbjct: 182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFLVFLIIVYSVGCCAFRN-NREDN 263
           V L+ L+I Y +   A+RN  R DN
Sbjct: 242 VVLIILVIFYVIAYAAYRNVKRIDN 266

[Close]

BLAST of CmaCh05G006600 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.9e-68
Identity = 124/259 (47.88%), Postives = 172/259 (66.41%), Query Frame = 0


Query: 3   RFSNNLVGILNFITFLLSIPILWAGVWL-SKQGSTECEKFLDKPVIIIGVFLMLISLAGL 62
           R  +NL+G++NF TFLLSIPIL  G+WL S+  ST+C +FL  P+IIIG+ +M+ISLAG+
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  LGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSSW 122
            GAC +  +L+W+YL  MF +I  L  FTIFA+VVT+KG+G  + NR Y +Y L DYS W
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121

Query: 123 LQKRVNSDKNWNKIKSCLIDGKICSSFADKY--VNDTVEQFYQEHLSALQSGCCKPSNDC 182
           L+ RV  +  W  I SC+ D  +C         V +T   FY  +LS ++SGCCKP  DC
Sbjct: 122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181

Query: 183 NYTYVSPIFW-NRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNI 242
            YTYV+   W         NPDC LW ND  +LC+ C +CKAG+L ++K +W+KV+V+NI
Sbjct: 182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFLVFLIIVYSVGCCAFRN 258
           V ++ L+I Y + C A++N
Sbjct: 242 VVVIILVIFYVIACAAYQN 260

[Close]

BLAST of CmaCh05G006600 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-112
Identity = 182/269 (67.66%), Postives = 227/269 (84.39%), Query Frame = 0


Query: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60
           M R SNNLVGILNF+ FLLSIPIL  G+WLS++GSTECE+FLDKPVI +GVFLM++++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120
           L+G+CCR++WLLWVYL VMF+LI+++F  T+FAFVVTNKGAGE +  +GYKEY+LGDYS+
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180
           WLQKRV + KNWNKI+SCL++ K+CS    K+VN  V  FY+EHL+ALQSGCCKPS++C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 181 YTYVSPIFWNRNAT-TSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIV 240
           + YV+P  W +N T T  NPDC  W+N    LCF+CQ+CKAGLLDN+KS WKKVA+VNIV
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

Query: 241 FLVFLIIVYSVGCCAFRNNREDNAYHRQW 269
           FLVFLIIVYSVGCCAFRNN+ D++Y R +
Sbjct: 241 FLVFLIIVYSVGCCAFRNNKRDDSYSRTY 269

[Close]

BLAST of CmaCh05G006600 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 )

HSP 1 Score: 380.9 bits (977), Expect = 8.2e-106
Identity = 171/260 (65.77%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60
           M + SNNL+GILNF TFLLSIPIL AG+WL K  +TECE+FLDKP++++G+FLM +S+AG
Sbjct: 1   MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120
           L+GACCR+S LLW+YL  MF+LI++ F FTIFAF VTN+GAGEV+S+RGYKEY + DYS+
Sbjct: 61  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120

Query: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180
           WLQKRVN+ KNW +I+SCL+   +CS++  +Y +  VE FY+ +L+ALQSGCCKPSNDCN
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180

Query: 181 YTYVSPIFWNRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIVF 240
           +TYV+P  W +      N DCN+W+N P  LC++C+ACKAGLLDNIK++WKKVA VNIVF
Sbjct: 181 FTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240

Query: 241 LVFLIIVYSVGCCAFRNNRE 261
           L+FLIIVYSVGCCAFRNNR+
Sbjct: 241 LIFLIIVYSVGCCAFRNNRK 260

[Close]

BLAST of CmaCh05G006600 vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 )

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-98
Identity = 157/261 (60.15%), Postives = 210/261 (80.46%), Query Frame = 0


Query: 1   MPRFSNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKFLDKPVIIIGVFLMLISLAG 60
           M RFSN+LVGILNF  FLLS+PIL  G+WLS + +T+CE+FLDKP+I +GVFLM+I++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  LLGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSS 120
           ++G+CCR++WLLW YL VMF LI+I+  FTIFAFVVT+KG+GE +  + YKEYRL  YS 
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query: 121 WLQKRVNSDKNWNKIKSCLIDGKICSSFADKYVNDTVEQFYQEHLSALQSGCCKPSNDCN 180
           WLQ+RVN+ K+WN I+SCL + K C +      N TV  FY+E L+A +SGCCKPSNDC+
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180

Query: 181 YTYVSPIFWNRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNIVF 240
           +TY++   WN+ + T  N DC LW+N+ + LC+NC+ACKAG LDN+K+ WK+VA+VNI+F
Sbjct: 181 FTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIF 240

Query: 241 LVFLIIVYSVGCCAFRNNRED 262
           LV L++VY++GCCAFRNN+ED
Sbjct: 241 LVLLVVVYAMGCCAFRNNKED 261

[Close]

BLAST of CmaCh05G006600 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 263.8 bits (673), Expect = 1.5e-70
Identity = 126/265 (47.55%), Postives = 180/265 (67.92%), Query Frame = 0


Query: 3   RFSNNLVGILNFITFLLSIPILWAGVWL-SKQGSTECEKFLDKPVIIIGVFLMLISLAGL 62
           R SN+L+G++NF+TFLLSIPIL  G+WL S+  ST+C +FL  P+I+IG+ +M++SLAG 
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  LGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSSW 122
            GAC R  +L+W+YL+VM ++I  L  F IFA+ VT+KG+G  + NRGY +Y L DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 123 LQKRVNSDKNWNKIKSCLIDGKICSSFADKY--VNDTVEQFYQEHLSALQSGCCKPSNDC 182
           L+ RV+ D  W KI SCL D   C      +  V +T + F+   LS ++SGCCKP  DC
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181

Query: 183 NYTYVSPIFWN-RNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNI 242
            ++YV+   W+ R      N DC +W ND ++LC+ C +CKAG+L ++K +W+KV+V+NI
Sbjct: 182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFLVFLIIVYSVGCCAFRN-NREDN 263
           V L+ L+I Y +   A+RN  R DN
Sbjct: 242 VVLIILVIFYVIAYAAYRNVKRIDN 266

[Close]

BLAST of CmaCh05G006600 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 259.6 bits (662), Expect = 2.8e-69
Identity = 124/259 (47.88%), Postives = 172/259 (66.41%), Query Frame = 0


Query: 3   RFSNNLVGILNFITFLLSIPILWAGVWL-SKQGSTECEKFLDKPVIIIGVFLMLISLAGL 62
           R  +NL+G++NF TFLLSIPIL  G+WL S+  ST+C +FL  P+IIIG+ +M+ISLAG+
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  LGACCRISWLLWVYLLVMFVLIVILFSFTIFAFVVTNKGAGEVLSNRGYKEYRLGDYSSW 122
            GAC +  +L+W+YL  MF +I  L  FTIFA+VVT+KG+G  + NR Y +Y L DYS W
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121

Query: 123 LQKRVNSDKNWNKIKSCLIDGKICSSFADKY--VNDTVEQFYQEHLSALQSGCCKPSNDC 182
           L+ RV  +  W  I SC+ D  +C         V +T   FY  +LS ++SGCCKP  DC
Sbjct: 122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181

Query: 183 NYTYVSPIFW-NRNATTSANPDCNLWENDPNILCFNCQACKAGLLDNIKSNWKKVAVVNI 242
            YTYV+   W         NPDC LW ND  +LC+ C +CKAG+L ++K +W+KV+V+NI
Sbjct: 182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 243 VFLVFLIIVYSVGCCAFRN 258
           V ++ L+I Y + C A++N
Sbjct: 242 VVVIILVIFYVIACAAYQN 260

The following BLAST results are available for this feature:

BLAST of CmaCh05G006600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8Q6	2.2e-111	67.66	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]
Q9SUD4	1.2e-104	65.77	Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1	[more]
Q9M0B7	1.8e-97	60.15	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
Q9M1E7	2.1e-69	47.55	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	3.9e-68	47.88	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]

BLAST of CmaCh05G006600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23810.1	1.5e-112	67.66	tetraspanin8	[more]
AT4G28050.1	8.2e-106	65.77	tetraspanin7	[more]
AT4G30430.1	1.3e-98	60.15	tetraspanin9	[more]
AT3G45600.1	1.5e-70	47.55	tetraspanin3	[more]
AT5G60220.1	2.8e-69	47.88	tetraspanin4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 39..65 score: 24.51 coord: 7..30 score: 28.28 coord: 66..94 score: 14.16
None	No IPR available	PANTHER	PTHR32191:SF69	TETRASPANIN-8	coord: 1..266
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 7..254 e-value: 1.6E-34 score: 119.6
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..266
IPR018503	Tetraspanin, conserved site	PROSITE	PS00421	TM4_1	coord: 50..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G006600.1	CmaCh05G006600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma