CmaCh05G006210 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G006210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2-like
Location	Cma_Chr05: 3119882 .. 3123798 (+)
RNA-Seq Expression	CmaCh05G006210
Synteny	CmaCh05G006210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCCCTGACCCATTTTTATCGCTCCATTTTCCTTGTGTTCCTATAACTTTCTATGAACTTTCTCCTTCTGCACCTCTCCTCCTTCAACCTCCGATCATCCTCAGAGTATGTTTCTGTTTCGGTTCTTTTTGTTTTTTCAGTGTTATGTTGTTTTTAATCTGTTTTTCGCATTGCGTTCTTTTGATCTTATGGTTTGTTGTCCCGTAATTTTGATTGAATTTGCGTTTGTTTATGATCGATGAATCTCTGATTGTGTTGGAATTGATGCTTCTGGAATCGTTTGTTCGTCTTCATCCGTTTTCGTTATTGTTATTATTATGATTTTTGTATGAAGAAGCTTTATATTGTTTGATTTTGTTTTTTTTCTTTTTAGTTACTTGCGATTTTTGTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGATCTGGTTCAAGGATTCAAAGTTTCAAGGTTCGTCAGTGGTGATTTGTTGGAATAATCAACGAGGAGAAGAAGAAAATGGCACCAGGAAATGAGGCATATGCTCCGAGGAATATTCTCATCACAGGGGCTGCAGGTTTCATAGCCTCTCATGTTACTAACCGTTTGATCAAAAACTATCCGCATTACAAGATTGTGGCTCTTGACAAGCTGGATTACTGCTCCAGCATTAAGAACCTACGCCCTTCTCAGACCTCTCCCAATTTTCGATTCATAAAGGGGGATATTGTTTCGGCTGATCTCATCAATTACCTTTTGGTTGCTGAAGAAATTGATACAATTATGCATTTTGCTGCCCAAACACATGTCGACAATTCGTTTGGTAACTCGTTTGAGTTCACGAACAACAATATTTATGGTACTCATGTTCTTCTTGAGGCCTGCAAAGTCACTCAAAGGATCAAGAGGTTCATTCATGTCAGCACTGATGAGGTTTATGGTGAGACTGATTTAGAGACAGATATTGGGAATCCTGAGGCTTCACAGCTTCTTCCCACTAATCCTTACTCTGCAACGAAGGCAGGGGCTGAAATGCTGGTCATGGCTTATCATCGGTCTTACGGCCTCCCGACAATTACAACTCGAGGCAATAATGTCTATGGACCTAATCAATACCCTGAAAAGCTTATCCCCAAGTTCATTCTCCTGGCCATGAATGGTGAGAAGTTGCCAATCCATGGGAATGGCTCAAATGTGAGAAGCTATCTATACAGCGAGGATGTTGCTCAGGCATTTGAAGTGATTCTGCATAAAGGAGTGATTGGTCATGTTTACAATATTGGGACCAAAAAGGAGAGGAGAGTGTTGGATGTAGCAGGAGATATTTGTAAGTTGGTTGGGTCAAATCCTGAGAAAGCCATAGATTTTGTGCAAGACAGACCCTTCAATGACCAGAGGTATTTCTTGGATGACCAAAAGTTGAAGAAGCTAGGATGGCAAGAGAGCACACCATGGGAAGAAGGGCTGAAAAGGACATTGGACTGGTATACCCAAAACCCCGACTGGTGGGGCGACGTATCTGCTGCGCTTGACCCACACCCTCGAATCTCTGTAGCCACTCATTCCAATGAAGATTCCTGGTTTTTCCAGTATGGATTCTCGAGATTGACGAGATCATGCAGTGAGATCAACAAAGATGGTGATTTGAAGCAAGATCAGCAAGGACTGAAGTTTTTGATATATGGAAGAACTGGCTGGATAGGAGGTTTGCTAGGCAAACTGTGCAAAGAAAAGGGAATAGAATTCGAGTATGGCAATGGAAGATTGGAGGATAGAAGATCCTTAATTGACGATATAAGGCGAGTGAGACCGACTCATGTGTTCAATGCTGCCGGGGTCACCGGAAGGCCTAATGTGGACTGGTGTGAATCACATAAGGTTGAAACTATAAGGGCAAATGTAGTTGGGACATTGACTCTTGCTGATGTTTGTAAGGAGCAAAGTCTCCTGTTGATGAACTTCGCAACTGGTTGCATTTTTGAATATGACAATGAGCATAAACTGGGATCAGGCGTTGGATTCAAGGAGGAAGATAAGCCAAATTTTATAGGTTCATTTTACTCCAAGACCAAGGCCATGGTAATAGCTCTTTTCTATTCTTTTTTCCCTTTGAAGTTTTTCTTTCTAATATGACTTGCCCTGTCAAATCCATAGTTATTGAGTAGCGAGATTTATCATCATTTCATGTGACGACATATAATTCATATTACACTCGGTGCAACCCGTTGTTATATGAATATTTGACATCTTCAGTGTCAAGAAGCAGTTTATGTAACAGTCTAAGCTCACCGCTAGCAGATATCATCCTCTTTGGGCTTCCACTCAGGGTTTTTAAAACGCATATACTTGCCCGAGAGAGAAAGTCCAAAGAGGACTTATAGTTTCCTTTGAGAAACGATTGATGCATTGATCTTATGTGAACTGCTGGGCATAATAGTTTATGTTTTCTACTTGATTCTCTCGTTTCTGTCATGGCTTTTCTGTATTAATTTGAAACCAACTTGAAGAACAAGTGAAATTCTTGATACTTCAATGCACTTTGCATCAAGCAAGCGAGGTCTGCAGCTGAAAATCCAAACTATCATTTGCAAGATATTAAAGCATTTTCGTTGCAATGGCTAAATGTTTGCAGGTTGAGGAGCTGCTAAGAGAATATCCAAATGTGTGCACACTGAGAGTAAGAATGCCAATATCATCAGATCTAAGCAACCCCAGAAACTTCATCACCAAGATCAGCCACTACAACAAGGTGGTGAACATTCCAAACAGCATGACGGTGCTGGACGAGCTGCTACCGATCTCAATCGAAATGGCAAAGAGGAACTGCAAAGGGATTTGGAACTTCACAAACCCGGGGGTGGTGAGCCACAATGAGATCTTGGAAATGTATAAGAAATACATCGACCCAAAGTTCAAATGGGAGAATTTCGGGTTGGAAGAACAAGCAAAGGTGATCGTGGCGCCAAGGAGCAACAATGAGTTGGATGCTTCAAAGCTAAAGAGGGAGTTCCCTGAATTGTTGTCCATCAAAGACTCCATTCTTAAGTTTGTTTTTGTGCCAAACAGGAAAGCTTAG

mRNA sequence

TTTCCCCTGACCCATTTTTATCGCTCCATTTTCCTTGTGTTCCTATAACTTTCTATGAACTTTCTCCTTCTGCACCTCTCCTCCTTCAACCTCCGATCATCCTCAGAGATTCAAAGTTTCAAGGTTCGTCAGTGGTGATTTGTTGGAATAATCAACGAGGAGAAGAAGAAAATGGCACCAGGAAATGAGGCATATGCTCCGAGGAATATTCTCATCACAGGGGCTGCAGGTTTCATAGCCTCTCATGTTACTAACCGTTTGATCAAAAACTATCCGCATTACAAGATTGTGGCTCTTGACAAGCTGGATTACTGCTCCAGCATTAAGAACCTACGCCCTTCTCAGACCTCTCCCAATTTTCGATTCATAAAGGGGGATATTGTTTCGGCTGATCTCATCAATTACCTTTTGGTTGCTGAAGAAATTGATACAATTATGCATTTTGCTGCCCAAACACATGTCGACAATTCGTTTGGTAACTCGTTTGAGTTCACGAACAACAATATTTATGGTACTCATGTTCTTCTTGAGGCCTGCAAAGTCACTCAAAGGATCAAGAGGTTCATTCATGTCAGCACTGATGAGGTTTATGGTGAGACTGATTTAGAGACAGATATTGGGAATCCTGAGGCTTCACAGCTTCTTCCCACTAATCCTTACTCTGCAACGAAGGCAGGGGCTGAAATGCTGGTCATGGCTTATCATCGGTCTTACGGCCTCCCGACAATTACAACTCGAGGCAATAATGTCTATGGACCTAATCAATACCCTGAAAAGCTTATCCCCAAGTTCATTCTCCTGGCCATGAATGGTGAGAAGTTGCCAATCCATGGGAATGGCTCAAATGTGAGAAGCTATCTATACAGCGAGGATGTTGCTCAGGCATTTGAAGTGATTCTGCATAAAGGAGTGATTGGTCATGTTTACAATATTGGGACCAAAAAGGAGAGGAGAGTGTTGGATGTAGCAGGAGATATTTGTAAGTTGGTTGGGTCAAATCCTGAGAAAGCCATAGATTTTGTGCAAGACAGACCCTTCAATGACCAGAGGTATTTCTTGGATGACCAAAAGTTGAAGAAGCTAGGATGGCAAGAGAGCACACCATGGGAAGAAGGGCTGAAAAGGACATTGGACTGGTATACCCAAAACCCCGACTGGTGGGGCGACGTATCTGCTGCGCTTGACCCACACCCTCGAATCTCTGTAGCCACTCATTCCAATGAAGATTCCTGGTTTTTCCAGTATGGATTCTCGAGATTGACGAGATCATGCAGTGAGATCAACAAAGATGGTGATTTGAAGCAAGATCAGCAAGGACTGAAGTTTTTGATATATGGAAGAACTGGCTGGATAGGAGGTTTGCTAGGCAAACTGTGCAAAGAAAAGGGAATAGAATTCGAGTATGGCAATGGAAGATTGGAGGATAGAAGATCCTTAATTGACGATATAAGGCGAGTGAGACCGACTCATGTGTTCAATGCTGCCGGGGTCACCGGAAGGCCTAATGTGGACTGGTGTGAATCACATAAGGTTGAAACTATAAGGGCAAATGTAGTTGGGACATTGACTCTTGCTGATGTTTGTAAGGAGCAAAGTCTCCTGTTGATGAACTTCGCAACTGGTTGCATTTTTGAATATGACAATGAGCATAAACTGGGATCAGGCGTTGGATTCAAGGAGGAAGATAAGCCAAATTTTATAGGTTCATTTTACTCCAAGACCAAGGCCATGGTTGAGGAGCTGCTAAGAGAATATCCAAATGTGTGCACACTGAGAGTAAGAATGCCAATATCATCAGATCTAAGCAACCCCAGAAACTTCATCACCAAGATCAGCCACTACAACAAGGTGGTGAACATTCCAAACAGCATGACGGTGCTGGACGAGCTGCTACCGATCTCAATCGAAATGGCAAAGAGGAACTGCAAAGGGATTTGGAACTTCACAAACCCGGGGGTGGTGAGCCACAATGAGATCTTGGAAATGTATAAGAAATACATCGACCCAAAGTTCAAATGGGAGAATTTCGGGTTGGAAGAACAAGCAAAGGTGATCGTGGCGCCAAGGAGCAACAATGAGTTGGATGCTTCAAAGCTAAAGAGGGAGTTCCCTGAATTGTTGTCCATCAAAGACTCCATTCTTAAGTTTGTTTTTGTGCCAAACAGGAAAGCTTAG

Coding sequence (CDS)

ATGGCACCAGGAAATGAGGCATATGCTCCGAGGAATATTCTCATCACAGGGGCTGCAGGTTTCATAGCCTCTCATGTTACTAACCGTTTGATCAAAAACTATCCGCATTACAAGATTGTGGCTCTTGACAAGCTGGATTACTGCTCCAGCATTAAGAACCTACGCCCTTCTCAGACCTCTCCCAATTTTCGATTCATAAAGGGGGATATTGTTTCGGCTGATCTCATCAATTACCTTTTGGTTGCTGAAGAAATTGATACAATTATGCATTTTGCTGCCCAAACACATGTCGACAATTCGTTTGGTAACTCGTTTGAGTTCACGAACAACAATATTTATGGTACTCATGTTCTTCTTGAGGCCTGCAAAGTCACTCAAAGGATCAAGAGGTTCATTCATGTCAGCACTGATGAGGTTTATGGTGAGACTGATTTAGAGACAGATATTGGGAATCCTGAGGCTTCACAGCTTCTTCCCACTAATCCTTACTCTGCAACGAAGGCAGGGGCTGAAATGCTGGTCATGGCTTATCATCGGTCTTACGGCCTCCCGACAATTACAACTCGAGGCAATAATGTCTATGGACCTAATCAATACCCTGAAAAGCTTATCCCCAAGTTCATTCTCCTGGCCATGAATGGTGAGAAGTTGCCAATCCATGGGAATGGCTCAAATGTGAGAAGCTATCTATACAGCGAGGATGTTGCTCAGGCATTTGAAGTGATTCTGCATAAAGGAGTGATTGGTCATGTTTACAATATTGGGACCAAAAAGGAGAGGAGAGTGTTGGATGTAGCAGGAGATATTTGTAAGTTGGTTGGGTCAAATCCTGAGAAAGCCATAGATTTTGTGCAAGACAGACCCTTCAATGACCAGAGGTATTTCTTGGATGACCAAAAGTTGAAGAAGCTAGGATGGCAAGAGAGCACACCATGGGAAGAAGGGCTGAAAAGGACATTGGACTGGTATACCCAAAACCCCGACTGGTGGGGCGACGTATCTGCTGCGCTTGACCCACACCCTCGAATCTCTGTAGCCACTCATTCCAATGAAGATTCCTGGTTTTTCCAGTATGGATTCTCGAGATTGACGAGATCATGCAGTGAGATCAACAAAGATGGTGATTTGAAGCAAGATCAGCAAGGACTGAAGTTTTTGATATATGGAAGAACTGGCTGGATAGGAGGTTTGCTAGGCAAACTGTGCAAAGAAAAGGGAATAGAATTCGAGTATGGCAATGGAAGATTGGAGGATAGAAGATCCTTAATTGACGATATAAGGCGAGTGAGACCGACTCATGTGTTCAATGCTGCCGGGGTCACCGGAAGGCCTAATGTGGACTGGTGTGAATCACATAAGGTTGAAACTATAAGGGCAAATGTAGTTGGGACATTGACTCTTGCTGATGTTTGTAAGGAGCAAAGTCTCCTGTTGATGAACTTCGCAACTGGTTGCATTTTTGAATATGACAATGAGCATAAACTGGGATCAGGCGTTGGATTCAAGGAGGAAGATAAGCCAAATTTTATAGGTTCATTTTACTCCAAGACCAAGGCCATGGTTGAGGAGCTGCTAAGAGAATATCCAAATGTGTGCACACTGAGAGTAAGAATGCCAATATCATCAGATCTAAGCAACCCCAGAAACTTCATCACCAAGATCAGCCACTACAACAAGGTGGTGAACATTCCAAACAGCATGACGGTGCTGGACGAGCTGCTACCGATCTCAATCGAAATGGCAAAGAGGAACTGCAAAGGGATTTGGAACTTCACAAACCCGGGGGTGGTGAGCCACAATGAGATCTTGGAAATGTATAAGAAATACATCGACCCAAAGTTCAAATGGGAGAATTTCGGGTTGGAAGAACAAGCAAAGGTGATCGTGGCGCCAAGGAGCAACAATGAGTTGGATGCTTCAAAGCTAAAGAGGGAGTTCCCTGAATTGTTGTCCATCAAAGACTCCATTCTTAAGTTTGTTTTTGTGCCAAACAGGAAAGCTTAG

Protein sequence

MAPGNEAYAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFIKGDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQRIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTITTRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKGVIGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGWQESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISVATHSNEDSWFFQYGFSRLTRSCSEINKDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLIDDIRRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATGCIFEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDLSNPRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILEMYKKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPNRKA

Homology

[Close]

BLAST of CmaCh05G006210 vs. ExPASy Swiss-Prot
Match: Q9LPG6 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana OX=3702 GN=RHM2 PE=1 SV=1)

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 511/662 (77.19%), Postives = 575/662 (86.86%), Query Frame = 0


Query: 8   YAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFIK 67
           Y P+NILITGAAGFIASHV NRLI+NYP YKIV LDKLDYCS +KNL PS +SPNF+F+K
Sbjct: 6   YKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVK 65

Query: 68  GDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQR 127
           GDI S DL+NYLL+ E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACKVT +
Sbjct: 66  GDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 125

Query: 128 IKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 187
           I+RFIHVSTDEVYGETD +  +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP IT
Sbjct: 126 IRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 185

Query: 188 TRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKGV 247
           TRGNNVYGPNQ+PEK+IPKFILLAM+G+ LPIHG+GSNVRSYLY EDVA+AFEV+LHKG 
Sbjct: 186 TRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 245

Query: 248 IGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGWQ 307
           IGHVYN+GTK+ERRV+DVA DICKL G +PE +I FV++RPFNDQRYFLDDQKLKKLGWQ
Sbjct: 246 IGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGWQ 305

Query: 308 ESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISV---ATHSNEDSWFFQYGFSRLT 367
           E T WE+GLK+T+DWYTQNP+WWGDVS AL PHPR+ +      S+  S       + + 
Sbjct: 306 ERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSSNTVQ 365

Query: 368 RSCSEINKDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLID 427
                  K+GD   D+  LKFLIYG+TGW+GGLLGKLC+++GI +EYG GRLEDR SL+ 
Sbjct: 366 TFTVVTPKNGD-SGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVA 425

Query: 428 DIRRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATG 487
           DIR ++PTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVC+E  LL+MNFATG
Sbjct: 426 DIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATG 485

Query: 488 CIFEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDL 547
           CIFEYD  H  GSG+GFKEEDKPNF GSFYSKTKAMVEELLRE+ NVCTLRVRMPISSDL
Sbjct: 486 CIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDL 545

Query: 548 SNPRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILE 607
           +NPRNFITKIS YNKVV+IPNSMTVLDELLPISIEMAKRN +GIWNFTNPGVVSHNEILE
Sbjct: 546 NNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILE 605

Query: 608 MYKKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPN 667
           MYK YI+P FKW NF +EEQAKVIVA RSNNE+D SKL +EFPE+LSIK+S+LK+VF PN
Sbjct: 606 MYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPN 665

[Close]

BLAST of CmaCh05G006210 vs. ExPASy Swiss-Prot
Match: Q9LH76 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 OS=Arabidopsis thaliana OX=3702 GN=RHM3 PE=2 SV=1)

HSP 1 Score: 1072.0 bits (2771), Expect = 2.7e-312
Identity = 501/660 (75.91%), Postives = 574/660 (86.97%), Query Frame = 0


Query: 8   YAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFIK 67
           Y P+NILITGAAGFIASHV NRL+++YP YKIV LDKLDYCS++KNL PS++SPNF+F+K
Sbjct: 4   YKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVK 63

Query: 68  GDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQR 127
           GDI SADL+NYLL+ EEIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACKVT +
Sbjct: 64  GDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123

Query: 128 IKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 187
           I+RFIHVSTDEVYGETD +  +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP IT
Sbjct: 124 IRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183

Query: 188 TRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKGV 247
           TRGNNVYGPNQ+PEKLIPKFILLAMNG+ LPIHG+GSNVRSYLY EDVA+AFEV+LHKG 
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243

Query: 248 IGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGWQ 307
           + HVYNIGT +ERRV+DVA DI KL G +P+  I +V++RPFNDQRYFLDDQKLKKLGW 
Sbjct: 244 VNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLGWC 303

Query: 308 ESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISVATHSNEDSWFFQYGFSRLTRSC 367
           E T WEEGL++T++WYT+NP+WWGDVS AL PHPR+ +           ++  +   ++ 
Sbjct: 304 ERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGNQTF 363

Query: 368 SEIN-KDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLIDDI 427
           + +         D++ LKFLIYG+TGW+GGLLGKLC+++GI +EYG GRLEDR SLI DI
Sbjct: 364 TVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADI 423

Query: 428 RRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATGCI 487
           R ++P+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVC+E  LL+MNFATGCI
Sbjct: 424 RSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCI 483

Query: 488 FEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDLSN 547
           FEYD  H  GSG+GFKEEDKPNF GSFYSKTKAMVEELLRE+ NVCTLRVRMPISSDL+N
Sbjct: 484 FEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNN 543

Query: 548 PRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILEMY 607
           PRNFITKIS YNKVVNIPNSMT+LDELLPISIEMAKRN +GIWNFTNPGVVSHNEILEMY
Sbjct: 544 PRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMY 603

Query: 608 KKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPNRK 667
           K YI+P FKW NF LEEQAKVIVAPRSNNE+D +KL +EFPE+LSIKDS++K+VF PN++
Sbjct: 604 KSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKR 663

[Close]

BLAST of CmaCh05G006210 vs. ExPASy Swiss-Prot
Match: Q9SYM5 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana OX=3702 GN=RHM1 PE=1 SV=1)

HSP 1 Score: 1070.8 bits (2768), Expect = 6.0e-312
Identity = 511/666 (76.73%), Postives = 578/666 (86.79%), Query Frame = 0


Query: 7   AYAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFI 66
           +Y P+NILITGAAGFIASHV NRLI++YP YKIV LDKLDYCS++KNL PS+ SPNF+F+
Sbjct: 3   SYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFV 62

Query: 67  KGDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQ 126
           KGDI SADL+N+LL+ E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACKVT 
Sbjct: 63  KGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122

Query: 127 RIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 186
           +I+RFIHVSTDEVYGETD +  +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP I
Sbjct: 123 QIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182

Query: 187 TTRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKG 246
           TTRGNNVYGPNQ+PEKLIPKFILLAM G+ LPIHG+GSNVRSYLY EDVA+AFEV+LHKG
Sbjct: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242

Query: 247 VIGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGW 306
            +GHVYNIGTKKERRV DVA DICKL   +PE  I FV +RPFNDQRYFLDDQKLKKLGW
Sbjct: 243 EVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLGW 302

Query: 307 QESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISVAT-----HSNEDSWFFQYGFS 366
            E T WEEGLK+T+DWYTQNP+WWGDVS AL PHPR+ +         +ED+        
Sbjct: 303 SERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLSE 362

Query: 367 RLTRSCSEI-NKDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRR 426
           + +++   + ++  +    +  LKFLIYG+TGWIGGLLGK+C ++GI +EYG GRLEDR 
Sbjct: 363 KPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRS 422

Query: 427 SLIDDIRRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMN 486
           SL+ DI+ V+PTHVFN+AGVTGRPNVDWCESHK ETIRANV GTLTLADVC+E  LL+MN
Sbjct: 423 SLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMN 482

Query: 487 FATGCIFEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPI 546
           FATGCIFEYD++H  GSG+GFKEED PNF GSFYSKTKAMVEELL+EY NVCTLRVRMPI
Sbjct: 483 FATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 542

Query: 547 SSDLSNPRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHN 606
           SSDL+NPRNFITKIS YNKVVNIPNSMTVLDELLPISIEMAKRN KGIWNFTNPGVVSHN
Sbjct: 543 SSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHN 602

Query: 607 EILEMYKKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFV 666
           EILEMY+ YI+P+FKW NF LEEQAKVIVAPRSNNE+DASKLK+EFPELLSIK+S++K+ 
Sbjct: 603 EILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYA 662

[Close]

BLAST of CmaCh05G006210 vs. ExPASy Swiss-Prot
Match: Q9LQ04 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana OX=3702 GN=NRS/ER PE=1 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 5.3e-135
Identity = 224/282 (79.43%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 385 FLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLIDDIRRVRPTHVFNAAGVTGRP 444
           FLIYG+TGWIGGLLGKLC+ +GI + YG+GRL+DR+S++ DI  V+P+HVFNAAGVTGRP
Sbjct: 15  FLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRP 74

Query: 445 NVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATGCIFEYDNEHKLGSGVGFKEE 504
           NVDWCESHKVETIR NV GTLTLAD+C+E+ L+L+N+ATGCIFEYD+ H LGSG+GFKEE
Sbjct: 75  NVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIGFKEE 134

Query: 505 DKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDLSNPRNFITKISHYNKVVNIP 564
           D PNF GSFYSKTKAMVEELL+ Y NVCTLRVRMPISSDL+NPRNFITKI+ Y KVV+IP
Sbjct: 135 DTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVVDIP 194

Query: 565 NSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILEMYKKYIDPKFKWENFGLEEQ 624
           NSMT+LDELLPISIEMAKRN  GI+NFTNPGVVSHNEILEMY+ YIDP F W+NF LEEQ
Sbjct: 195 NSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQ 254

Query: 625 AKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPNRK 667
           AKVIVAPRSNNELDA+KLK EFPEL+SIK+S++KFVF PN+K
Sbjct: 255 AKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKK 296

[Close]

BLAST of CmaCh05G006210 vs. ExPASy Swiss-Prot
Match: Q8VDR7 (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus OX=10090 GN=Tgds PE=2 SV=2)

HSP 1 Score: 336.3 bits (861), Expect = 8.1e-91
Identity = 166/345 (48.12%), Postives = 226/345 (65.51%), Query Frame = 0


Query: 3   PGNEAYAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPN 62
           PG+ A   + +L+TG AGFIASHV   L+++YP Y IV LDKLDYC+S+KNL P     N
Sbjct: 13  PGSFA---KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQN 72

Query: 63  FRFIKGDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEAC 122
           ++FI+GDI  +  +  L   E+ID ++HFAAQTHVD SF  +FEFT  N+YGTHVL+ A 
Sbjct: 73  YKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAA 132

Query: 123 KVTQRIKRFIHVSTDEVY-GETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSY 182
                +++FI+VSTDEVY G  D E D    E+S   PTNPY+++KA AE  V +Y   Y
Sbjct: 133 -YEAGVEKFIYVSTDEVYGGSLDQEFD----ESSPKQPTNPYASSKAAAECFVQSYWERY 192

Query: 183 GLPTITTRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEV 242
             P + TR +NVYGP+QYPEK+IPKFI L  +  K  IHG+G   R++LY+ DV +AF  
Sbjct: 193 KFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLT 252

Query: 243 ILHKGVIGHVYNIGTKKERRVLDVAGDICKLV-----GSNPEKAIDFVQDRPFNDQRYFL 302
           +L KG  G +YNIGT  E  V+ +A ++ +L+      S  E  +D+V DRP ND RY +
Sbjct: 253 VLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPM 312

Query: 303 DDQKLKKLGWQESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHP 342
             +K+  LGW+   PWEEG+K+T++WY +N   W +   AL+P P
Sbjct: 313 KSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349

[Close]

BLAST of CmaCh05G006210 vs. TAIR 10
Match: AT1G53500.1 (NAD-dependent epimerase/dehydratase family protein )

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 511/662 (77.19%), Postives = 575/662 (86.86%), Query Frame = 0


Query: 8   YAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFIK 67
           Y P+NILITGAAGFIASHV NRLI+NYP YKIV LDKLDYCS +KNL PS +SPNF+F+K
Sbjct: 6   YKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVK 65

Query: 68  GDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQR 127
           GDI S DL+NYLL+ E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACKVT +
Sbjct: 66  GDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 125

Query: 128 IKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 187
           I+RFIHVSTDEVYGETD +  +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP IT
Sbjct: 126 IRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 185

Query: 188 TRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKGV 247
           TRGNNVYGPNQ+PEK+IPKFILLAM+G+ LPIHG+GSNVRSYLY EDVA+AFEV+LHKG 
Sbjct: 186 TRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 245

Query: 248 IGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGWQ 307
           IGHVYN+GTK+ERRV+DVA DICKL G +PE +I FV++RPFNDQRYFLDDQKLKKLGWQ
Sbjct: 246 IGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGWQ 305

Query: 308 ESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISV---ATHSNEDSWFFQYGFSRLT 367
           E T WE+GLK+T+DWYTQNP+WWGDVS AL PHPR+ +      S+  S       + + 
Sbjct: 306 ERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSSNTVQ 365

Query: 368 RSCSEINKDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLID 427
                  K+GD   D+  LKFLIYG+TGW+GGLLGKLC+++GI +EYG GRLEDR SL+ 
Sbjct: 366 TFTVVTPKNGD-SGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVA 425

Query: 428 DIRRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATG 487
           DIR ++PTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVC+E  LL+MNFATG
Sbjct: 426 DIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATG 485

Query: 488 CIFEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDL 547
           CIFEYD  H  GSG+GFKEEDKPNF GSFYSKTKAMVEELLRE+ NVCTLRVRMPISSDL
Sbjct: 486 CIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDL 545

Query: 548 SNPRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILE 607
           +NPRNFITKIS YNKVV+IPNSMTVLDELLPISIEMAKRN +GIWNFTNPGVVSHNEILE
Sbjct: 546 NNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILE 605

Query: 608 MYKKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPN 667
           MYK YI+P FKW NF +EEQAKVIVA RSNNE+D SKL +EFPE+LSIK+S+LK+VF PN
Sbjct: 606 MYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPN 665

[Close]

BLAST of CmaCh05G006210 vs. TAIR 10
Match: AT3G14790.1 (rhamnose biosynthesis 3 )

HSP 1 Score: 1072.0 bits (2771), Expect = 1.9e-313
Identity = 501/660 (75.91%), Postives = 574/660 (86.97%), Query Frame = 0


Query: 8   YAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFIK 67
           Y P+NILITGAAGFIASHV NRL+++YP YKIV LDKLDYCS++KNL PS++SPNF+F+K
Sbjct: 4   YKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVK 63

Query: 68  GDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQR 127
           GDI SADL+NYLL+ EEIDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACKVT +
Sbjct: 64  GDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123

Query: 128 IKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 187
           I+RFIHVSTDEVYGETD +  +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP IT
Sbjct: 124 IRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183

Query: 188 TRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKGV 247
           TRGNNVYGPNQ+PEKLIPKFILLAMNG+ LPIHG+GSNVRSYLY EDVA+AFEV+LHKG 
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243

Query: 248 IGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGWQ 307
           + HVYNIGT +ERRV+DVA DI KL G +P+  I +V++RPFNDQRYFLDDQKLKKLGW 
Sbjct: 244 VNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLGWC 303

Query: 308 ESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISVATHSNEDSWFFQYGFSRLTRSC 367
           E T WEEGL++T++WYT+NP+WWGDVS AL PHPR+ +           ++  +   ++ 
Sbjct: 304 ERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGNQTF 363

Query: 368 SEIN-KDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLIDDI 427
           + +         D++ LKFLIYG+TGW+GGLLGKLC+++GI +EYG GRLEDR SLI DI
Sbjct: 364 TVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADI 423

Query: 428 RRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATGCI 487
           R ++P+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVC+E  LL+MNFATGCI
Sbjct: 424 RSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCI 483

Query: 488 FEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDLSN 547
           FEYD  H  GSG+GFKEEDKPNF GSFYSKTKAMVEELLRE+ NVCTLRVRMPISSDL+N
Sbjct: 484 FEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNN 543

Query: 548 PRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILEMY 607
           PRNFITKIS YNKVVNIPNSMT+LDELLPISIEMAKRN +GIWNFTNPGVVSHNEILEMY
Sbjct: 544 PRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMY 603

Query: 608 KKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPNRK 667
           K YI+P FKW NF LEEQAKVIVAPRSNNE+D +KL +EFPE+LSIKDS++K+VF PN++
Sbjct: 604 KSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKR 663

[Close]

BLAST of CmaCh05G006210 vs. TAIR 10
Match: AT1G78570.1 (rhamnose biosynthesis 1 )

HSP 1 Score: 1070.8 bits (2768), Expect = 4.3e-313
Identity = 511/666 (76.73%), Postives = 578/666 (86.79%), Query Frame = 0


Query: 7   AYAPRNILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFI 66
           +Y P+NILITGAAGFIASHV NRLI++YP YKIV LDKLDYCS++KNL PS+ SPNF+F+
Sbjct: 3   SYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFV 62

Query: 67  KGDIVSADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQ 126
           KGDI SADL+N+LL+ E IDTIMHFAAQTHVDNSFGNSFEFT NNIYGTHVLLEACKVT 
Sbjct: 63  KGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122

Query: 127 RIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTI 186
           +I+RFIHVSTDEVYGETD +  +GN EASQLLPTNPYSATKAGAEMLVMAY RSYGLP I
Sbjct: 123 QIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182

Query: 187 TTRGNNVYGPNQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHKG 246
           TTRGNNVYGPNQ+PEKLIPKFILLAM G+ LPIHG+GSNVRSYLY EDVA+AFEV+LHKG
Sbjct: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242

Query: 247 VIGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKKLGW 306
            +GHVYNIGTKKERRV DVA DICKL   +PE  I FV +RPFNDQRYFLDDQKLKKLGW
Sbjct: 243 EVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLGW 302

Query: 307 QESTPWEEGLKRTLDWYTQNPDWWGDVSAALDPHPRISVAT-----HSNEDSWFFQYGFS 366
            E T WEEGLK+T+DWYTQNP+WWGDVS AL PHPR+ +         +ED+        
Sbjct: 303 SERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLSE 362

Query: 367 RLTRSCSEI-NKDGDLKQDQQGLKFLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRR 426
           + +++   + ++  +    +  LKFLIYG+TGWIGGLLGK+C ++GI +EYG GRLEDR 
Sbjct: 363 KPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRS 422

Query: 427 SLIDDIRRVRPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMN 486
           SL+ DI+ V+PTHVFN+AGVTGRPNVDWCESHK ETIRANV GTLTLADVC+E  LL+MN
Sbjct: 423 SLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMN 482

Query: 487 FATGCIFEYDNEHKLGSGVGFKEEDKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPI 546
           FATGCIFEYD++H  GSG+GFKEED PNF GSFYSKTKAMVEELL+EY NVCTLRVRMPI
Sbjct: 483 FATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 542

Query: 547 SSDLSNPRNFITKISHYNKVVNIPNSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHN 606
           SSDL+NPRNFITKIS YNKVVNIPNSMTVLDELLPISIEMAKRN KGIWNFTNPGVVSHN
Sbjct: 543 SSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHN 602

Query: 607 EILEMYKKYIDPKFKWENFGLEEQAKVIVAPRSNNELDASKLKREFPELLSIKDSILKFV 666
           EILEMY+ YI+P+FKW NF LEEQAKVIVAPRSNNE+DASKLK+EFPELLSIK+S++K+ 
Sbjct: 603 EILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYA 662

[Close]

BLAST of CmaCh05G006210 vs. TAIR 10
Match: AT1G63000.1 (nucleotide-rhamnose synthase/epimerase-reductase )

HSP 1 Score: 483.0 bits (1242), Expect = 3.8e-136
Identity = 224/282 (79.43%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 385 FLIYGRTGWIGGLLGKLCKEKGIEFEYGNGRLEDRRSLIDDIRRVRPTHVFNAAGVTGRP 444
           FLIYG+TGWIGGLLGKLC+ +GI + YG+GRL+DR+S++ DI  V+P+HVFNAAGVTGRP
Sbjct: 15  FLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRP 74

Query: 445 NVDWCESHKVETIRANVVGTLTLADVCKEQSLLLMNFATGCIFEYDNEHKLGSGVGFKEE 504
           NVDWCESHKVETIR NV GTLTLAD+C+E+ L+L+N+ATGCIFEYD+ H LGSG+GFKEE
Sbjct: 75  NVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIGFKEE 134

Query: 505 DKPNFIGSFYSKTKAMVEELLREYPNVCTLRVRMPISSDLSNPRNFITKISHYNKVVNIP 564
           D PNF GSFYSKTKAMVEELL+ Y NVCTLRVRMPISSDL+NPRNFITKI+ Y KVV+IP
Sbjct: 135 DTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVVDIP 194

Query: 565 NSMTVLDELLPISIEMAKRNCKGIWNFTNPGVVSHNEILEMYKKYIDPKFKWENFGLEEQ 624
           NSMT+LDELLPISIEMAKRN  GI+NFTNPGVVSHNEILEMY+ YIDP F W+NF LEEQ
Sbjct: 195 NSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQ 254

Query: 625 AKVIVAPRSNNELDASKLKREFPELLSIKDSILKFVFVPNRK 667
           AKVIVAPRSNNELDA+KLK EFPEL+SIK+S++KFVF PN+K
Sbjct: 255 AKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKK 296

[Close]

BLAST of CmaCh05G006210 vs. TAIR 10
Match: AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-23
Identity = 91/312 (29.17%), Postives = 146/312 (46.79%), Query Frame = 0


Query: 13  ILITGAAGFIASHVTNRLIKNYPHYKIVALDKLDYCSSIKNLRPSQTSPNFRFIKGDIVS 72
           ILI+G AGFI SH+ ++L++N  +  +VA +   +  S +NL+     P F  I+ D+  
Sbjct: 32  ILISGGAGFIGSHLVDKLMENEKNEVVVADNY--FTGSKENLKKWIGHPRFELIRHDVTE 91

Query: 73  ADLINYLLVAEEIDTIMHFAAQTHVDNSFGNSFEFTNNNIYGTHVLLEACKVTQRI-KRF 132
             LI       E+D I H A          N  +    N+ GT   L    + +R+  R 
Sbjct: 92  PLLI-------EVDRIYHLACPASPIFYKYNPVKTIKTNVIGT---LNMLGLAKRVGARI 151

Query: 133 IHVSTDEVYGETDL----ETDIGNPEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPTIT 192
           +  ST EVYG+  +    E+  GN   + +   + Y   K  AE L+  YHR +G+    
Sbjct: 152 LLTSTSEVYGDPLIHPQPESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 211

Query: 193 TRGNNVYGP--NQYPEKLIPKFILLAMNGEKLPIHGNGSNVRSYLYSEDVAQAFEVILHK 252
            R  N YGP  N    +++  FI  A+ GE L +   G+  RS+ Y  D+      ++  
Sbjct: 212 ARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEG 271

Query: 253 GVIGHVYNIGTKKERRVLDVAGDICKLVGSNPEKAIDFVQDRPFNDQRYFLDDQKLKK-L 312
              G + NIG   E  ++++A  + +L+  NP   I  V++ P + ++   D  K K+ L
Sbjct: 272 NDTGPI-NIGNPGEFTMVELAETVKELI--NPSIEIKMVENTPDDPRQRKPDISKAKEVL 326

Query: 313 GWQESTPWEEGL 317
           GW+      EGL
Sbjct: 332 GWEPKVKLREGL 326

The following BLAST results are available for this feature:

BLAST of CmaCh05G006210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPG6	0.0e+00	77.19	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LH76	2.7e-312	75.91	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9SYM5	6.0e-312	76.73	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LQ04	5.3e-135	79.43	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
Q8VDR7	8.1e-91	48.12	dTDP-D-glucose 4,6-dehydratase OS=Mus musculus OX=10090 GN=Tgds PE=2 SV=2	[more]

BLAST of CmaCh05G006210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53500.1	0.0e+00	77.19	NAD-dependent epimerase/dehydratase family protein	[more]
AT3G14790.1	1.9e-313	75.91	rhamnose biosynthesis 3	[more]
AT1G78570.1	4.3e-313	76.73	rhamnose biosynthesis 1	[more]
AT1G63000.1	3.8e-136	79.43	nucleotide-rhamnose synthase/epimerase-reductase	[more]
AT5G59290.1	1.1e-23	29.17	UDP-glucuronic acid decarboxylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 13..317 e-value: 1.2E-111 score: 374.9
None	No IPR available	GENE3D	3.90.25.10		coord: 204..326 e-value: 1.2E-111 score: 374.9
None	No IPR available	GENE3D	3.40.50.720		coord: 374..667 e-value: 7.2E-78 score: 263.8
None	No IPR available	PANTHER	PTHR43000	DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED	coord: 1..665
None	No IPR available	PANTHER	PTHR43000:SF22	TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM3-LIKE	coord: 1..665
None	No IPR available	CDD	cd05254	dTDP_HR_like_SDR_e	coord: 384..656 e-value: 7.35887E-58 score: 195.153
IPR029903	RmlD-like substrate binding domain	PFAM	PF04321	RmlD_sub_bind	coord: 384..553 e-value: 3.9E-12 score: 45.8
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 14..319 e-value: 4.4E-68 score: 230.2
IPR005888	dTDP-glucose 4,6-dehydratase	CDD	cd05246	dTDP_GD_SDR_e	coord: 11..328 e-value: 1.45368E-168 score: 482.819
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 9..333
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 378..660

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G006210.1	CmaCh05G006210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009225	nucleotide-sugar metabolic process
molecular_function	GO:0008460	dTDP-glucose 4,6-dehydratase activity