CmaCh05G005770 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G005770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionOleosin
LocationCma_Chr05: 2869594 .. 2869944 (-)
RNA-Seq ExpressionCmaCh05G005770
SyntenyCmaCh05G005770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAATCAATCAAGACCAGCGACCAGCCGGACTCTCTACGACTCCCCTCCCTCCTCTCGCCACATCGTCAAGTTCGTGACGGCGGCAACCATCGGTACCATCTTCCTCGTCTCTTCTGGATTGACTATAACAGGAACAGTTCTAATCCTCATACTGTCCACTCCGATTCTCGTCTTGTTTAGTCCGATTTTGGTACCGGCGGCAACTGTTCTGGTCCTCGCGGCTGCCGGATTCTTCTTCTCAGCAACTTGTACGGTGGTAGCGATAGCGGCACTGACGTGGATGTCCAAGTACGTGACGGGGAAGAGGCCGTCAGAGGCAAGATGGAAGAAACGGGGAGGGAGATGA

mRNA sequence

ATGTCCAATCAATCAAGACCAGCGACCAGCCGGACTCTCTACGACTCCCCTCCCTCCTCTCGCCACATCGTCAAGTTCGTGACGGCGGCAACCATCGGTACCATCTTCCTCGTCTCTTCTGGATTGACTATAACAGGAACAGTTCTAATCCTCATACTGTCCACTCCGATTCTCGTCTTGTTTAGTCCGATTTTGGTACCGGCGGCAACTGTTCTGGTCCTCGCGGCTGCCGGATTCTTCTTCTCAGCAACTTGTACGGTGGTAGCGATAGCGGCACTGACGTGGATGTCCAAGTACGTGACGGGGAAGAGGCCGTCAGAGGCAAGATGGAAGAAACGGGGAGGGAGATGA

Coding sequence (CDS)

ATGTCCAATCAATCAAGACCAGCGACCAGCCGGACTCTCTACGACTCCCCTCCCTCCTCTCGCCACATCGTCAAGTTCGTGACGGCGGCAACCATCGGTACCATCTTCCTCGTCTCTTCTGGATTGACTATAACAGGAACAGTTCTAATCCTCATACTGTCCACTCCGATTCTCGTCTTGTTTAGTCCGATTTTGGTACCGGCGGCAACTGTTCTGGTCCTCGCGGCTGCCGGATTCTTCTTCTCAGCAACTTGTACGGTGGTAGCGATAGCGGCACTGACGTGGATGTCCAAGTACGTGACGGGGAAGAGGCCGTCAGAGGCAAGATGGAAGAAACGGGGAGGGAGATGA

Protein sequence

MSNQSRPATSRTLYDSPPSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVLAAAGFFFSATCTVVAIAALTWMSKYVTGKRPSEARWKKRGGR
Homology
BLAST of CmaCh05G005770 vs. ExPASy Swiss-Prot
Match: Q647G3 (Oleosin Ara h 15.0101 OS=Arachis hypogaea OX=3818 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-19
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 0

Query: 12  TLYDSPPSS--RHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAA 71
           T YD   +   R  +KF+TA+TIG  FL+ SGL +TGTV+ LI++TP+LV+FSPILVPAA
Sbjct: 31  TSYDPSTNQPIRQAIKFMTASTIGVSFLILSGLILTGTVIGLIIATPLLVIFSPILVPAA 90

Query: 72  TVLVLAAAGFFFSATCTVVAIAALTWMSKYVTGKRPS 107
             L LAA GF FS  C V AIAAL+W+  YVTGK P+
Sbjct: 91  ITLALAAGGFLFSGGCGVAAIAALSWLYSYVTGKHPA 127

BLAST of CmaCh05G005770 vs. ExPASy Swiss-Prot
Match: Q42980 (Oleosin 16 kDa OS=Oryza sativa subsp. japonica OX=39947 GN=OLE16 PE=2 SV=3)

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-13
Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 0

Query: 15  DSPPSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVL 74
           +  P     +K VTAAT G   LV SGL + GTV+ L ++TP+LV+FSP+LVPAA  L L
Sbjct: 24  EKQPFMMTALKTVTAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALAL 83

Query: 75  AAAGFFFSATCTVVAIAALTWMSKYVTGKRPSEA 109
            AAGF  S    V A++  +WM KY+TGK P  A
Sbjct: 84  MAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGA 117

BLAST of CmaCh05G005770 vs. ExPASy Swiss-Prot
Match: P13436 (Oleosin Zm-I OS=Zea mays OX=4577 GN=OLE16 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 24  VKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVLAAAGFFFSA 83
           +K  TAAT G   LV SGL + GTV+ L ++TP+LV+FSP+LVPAA  L L AAGF  S 
Sbjct: 41  LKAATAATFGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSG 100

Query: 84  TCTVVAIAALTWMSKYVTGKRPSEA 109
              V A++  +WM KY+TGK P  A
Sbjct: 101 GLGVAALSVFSWMYKYLTGKHPPAA 125

BLAST of CmaCh05G005770 vs. ExPASy Swiss-Prot
Match: Q9XHP2 (Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 18  PSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVLAAA 77
           P ++ +VK  TA T G   LV SGLT+ GTV+ L ++TP+LV+FSP+LVPA   + L  A
Sbjct: 20  PRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPLLVIFSPVLVPAVITIFLLGA 79

Query: 78  GFFFSATCTVVAIAALTWMSKYVTGKRPSEA 109
           GF  S    V A++ L+W+ +Y+TGK P  A
Sbjct: 80  GFLASGGFGVAALSVLSWIYRYLTGKHPPGA 110

BLAST of CmaCh05G005770 vs. ExPASy Swiss-Prot
Match: A0A1I9R3Y6 (Oleosin OS=Pinus elliottii OX=42064 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 0

Query: 13  LYDSPPSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVL 72
           ++D  P+   I+ F+T    G I L+ +GLT+TGTV+ L++ TP+L+ FSPIL+P ATVL
Sbjct: 12  IHDHTPNPTQILGFITLFVSGAILLLLTGLTLTGTVIGLVVLTPVLIFFSPILIPVATVL 71

Query: 73  VLAAAGFFFSATCTVVAIAALTWMSKYVTGKRPSEA 109
            +A AGF  +    + A++A++W+  Y+ G+ P  A
Sbjct: 72  FVAVAGFLSAGGFGLAALSAISWLYNYIKGRHPPGA 107

BLAST of CmaCh05G005770 vs. TAIR 10
Match: AT2G25890.1 (Oleosin family protein )

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0

Query: 4   QSRPATSRTLYDSPPSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSP 63
           Q +    R+L++S PS+R IV+FVTAATIG   LV SGLT+TGTV+ LI++TP++VLFSP
Sbjct: 9   QQQQPIMRSLHESSPSTRQIVRFVTAATIGLSLLVLSGLTLTGTVIGLIVATPLMVLFSP 68

Query: 64  ILVPAATVLVLAAAGFFFSATCTVVAIAALTWMSKYVTGKRPSEA 109
           +LVPA   + L   GF FS  C V A  ALTW+ KYVTGK P  A
Sbjct: 69  VLVPAVITIGLLTMGFLFSGGCGVAAATALTWIYKYVTGKHPMGA 113

BLAST of CmaCh05G005770 vs. TAIR 10
Match: AT5G51210.1 (oleosin3 )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0

Query: 15  DSPPSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVL 74
           ++ P +R +VK  TA T G   LV SGLT+ GTV+ L ++TP+LV+FSP+LVPA   + L
Sbjct: 19  EAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVAL 78

Query: 75  AAAGFFFSATCTVVAIAALTWMSKYVTG 103
              GF  S    + AI A +W+ +++TG
Sbjct: 79  IITGFLASGGFGIAAITAFSWLYRHMTG 106

BLAST of CmaCh05G005770 vs. TAIR 10
Match: AT4G25140.1 (oleosin 1 )

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 20  SRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVLAAAGF 79
           SR I K  TA T G   LV S LT+ GTV+ L ++TP+LV+FSPILVPA   + L   GF
Sbjct: 40  SRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGF 99

Query: 80  FFSATCTVVAIAALTWMSKYVTGKRP 106
             S    + AI   +W+ KY TG+ P
Sbjct: 100 LSSGGFGIAAITVFSWIYKYATGEHP 125

BLAST of CmaCh05G005770 vs. TAIR 10
Match: AT3G01570.1 (Oleosin family protein )

HSP 1 Score: 50.8 bits (120), Expect = 8.4e-07
Identity = 32/91 (35.16%), Postives = 55/91 (60.44%), Query Frame = 0

Query: 11  RTLY-DSPPSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAA 70
           + LY  S PSS  ++       IG   L  +GLT+ G+V+ L+L+ P+ ++FSP++VPAA
Sbjct: 24  KVLYPQSGPSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAA 83

Query: 71  TVLVLAAAGFFFSATCTVVAIAALTWMSKYV 101
            V+ LA  GF  S    +  +++++W+  Y+
Sbjct: 84  FVIGLAMTGFLASGAIGLTGLSSMSWVLNYI 114

BLAST of CmaCh05G005770 vs. TAIR 10
Match: AT3G27660.1 (oleosin 4 )

HSP 1 Score: 48.9 bits (115), Expect = 3.2e-06
Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 0

Query: 18  PSSRHIVKFVTAATIGTIFLVSSGLTITGTVLILILSTPILVLFSPILVPAATVLVLAAA 77
           PS+  I+  +    IG   L  +GLT+ G+V+ L++S P+ +LFSP++VPAA  + LA  
Sbjct: 47  PSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVT 106

Query: 78  GFFFSATCTVVAIAALTWMSKYVTGKR---PSEARWKKR 114
           G   S    +  +++++W+  Y+ G     P +  + KR
Sbjct: 107 GILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKR 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q647G32.4e-1958.76Oleosin Ara h 15.0101 OS=Arachis hypogaea OX=3818 PE=1 SV=1[more]
Q429807.6e-1350.00Oleosin 16 kDa OS=Oryza sativa subsp. japonica OX=39947 GN=OLE16 PE=2 SV=3[more]
P134361.3e-1252.94Oleosin Zm-I OS=Zea mays OX=4577 GN=OLE16 PE=2 SV=2[more]
Q9XHP21.7e-1247.25Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1[more]
A0A1I9R3Y61.7e-1241.67Oleosin OS=Pinus elliottii OX=42064 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT2G25890.13.2e-2257.14Oleosin family protein [more]
AT5G51210.11.5e-1144.32oleosin3 [more]
AT4G25140.13.3e-1147.67oleosin 1 [more]
AT3G01570.18.4e-0735.16Oleosin family protein [more]
AT3G27660.13.2e-0632.32oleosin 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000136OleosinPFAMPF01277Oleosincoord: 22..108
e-value: 1.8E-28
score: 98.5
IPR000136OleosinPANTHERPTHR33203OLEOSINcoord: 1..106
NoneNo IPR availablePANTHERPTHR33203:SF24OLEOSINcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G005770.1CmaCh05G005770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019915 lipid storage
biological_process GO:0022414 reproductive process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0012511 monolayer-surrounded lipid storage body