CmaCh05G005300 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G005300
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionB-like cyclin
LocationCma_Chr05: 2535606 .. 2537595 (-)
RNA-Seq ExpressionCmaCh05G005300
SyntenyCmaCh05G005300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTGTGGTTGCGATTCCTTATATGTCCATTCCCCATCTTCCTTCTTTAACCTAAAAAGGAACGCCCTTTTCATCCCCTTCATAGCCTCCTCCTCTATTCCGCCAGTCTTTTCAGGCCCCATCTTCCACAACGCAGCTCGACGCTAAACGACCATACACATTTCACTCTACAAGAACAAGAACAAGCCCCTCTGCTACCTACTACCCTTTTTGTTCTTATTCCTTTCAAAATCCATAATCGCCCGCTTCAGCCTTCTGCCCTCTGTTTTTCGCAATCCAAAACAGAGAAAAGGGGTTTCTGATGGCGCCATATTATCTTAAAACTCATCGGAATCGGAGCCACCGCCGCGGTGCCTCCGATGGGTTGCCGTTTATGAGCGATGAATGCTTGATTGAAATGGTCGAGAAGGAAACCCATCACTTGCCTCTTCATGGGTACCTCCTGAAGTTCCACAACGGCGACTTGGATGTTCGAGCAAGAACAGAGGCCGTCGATTGGATTAAAAAGGTGAGTATTGGTCTTGATTCAAAGATTTTCGAAGTTTATTTCTTCTGTTCTTCATTCATCAAAGCTTAATATCCAAACTCATTTCTTCATTTTTCTTGATCAACAGGTGAGTACTCATTTCAGATTTGGACCTCTCTGTATATACTTAGCCGTAAATTACTTGGATCGCTTCCTCTCCGCTTATGATCTACCCGTAAGGATGACGATCGCCTTCGGTTAATTCATAGTATCGATACGATTTGATGTCTAATTGTTTTTGTGCCATTTGCAGAAAGGCAGAGCTTGGACAATGCAGCTGCTTGCTGTGGCATGTATGTCCCTTGCAGCTAAATTGGAGGAGACAGAAGTCCCTCTCTCATTGGATTTACAGGTTCGACAATCGTTTCGATACTTGTTTGATCGAAAACGATTCACATTTCGCTAATAACAATCGGATTCAATCACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTGTTGACAACATTGGGATGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATCGATCATTACCTTCGAAAGATCCACTACGACGAATTCTCTCTCGAAATGTCAATCGAGCAATCGAGTCGTCTACTCTTGAACATAATACATGGTCCTATTTCGTTCTTGAACGCAATCATTATTGTGTCGATGAGTTTCGAAATGGTTTTGATCGATCTTTCTTATAGGTATCGAGTTCTTGGAATTCAAACCATCGGAGATTGCAGCAGCTGTGGCGATATCAGTCGCCGGGGAAGCTCAATCAGTGGACCCTGATAGAGCAATTCATCTTCTAATTCAGCAACTCCAAATGGTAATAATATAGATAAGAAGTTGATTATGTGTGGAACATGATCATAATCTGATGCATACATTTATGTGCAGGAAAGAGTTCTTAAGTGTCTTAAGTTAATCGATGACATGTTCGTCTGCGGGGGTGGGTTGGGGAAGGGCTCGAGAGCGTCGATGTCGTCGGAGCGACGGAGCCCGAGCAGGGTGTTGGAGATGACATGCTTAAGCTATACAAGCAATGACACAGCAGTTGTGTCGTGTGCAAACTCAAATGCTACAAAGAGGAGGAGATTGAACAGACCCTGTGAAGTAAATTTTTGATGTGGTAATTTTAAAATAACAGCGGTAATTTTAAAGGAACAGAAGGAGGAGGAAGTGGGAAGTGTTTGATTGTGAGATACACTTTCTTCTACGTGGCTAATTTGTATTGGCTGAGACCAAAAAAAGGAAAACCAAAGAAATAAAAAAAAATTAAATTGTCTTTTTTTTTTTTTTTAATATAAATTATGGAATTGTTTAATATATATTTTGTTGAGTCATTTAAATAGTGTCTTGTAAACGCAGTATGAGCAGAGAGTTGACAGCGCTTTGTGTTGACTATTGGTCTAACTATGACTGGGTTTTGTTCTTTAGCTTATGTGGTAAAACCCCATC

mRNA sequence

GTTTTGTGGTTGCGATTCCTTATATGTCCATTCCCCATCTTCCTTCTTTAACCTAAAAAGGAACGCCCTTTTCATCCCCTTCATAGCCTCCTCCTCTATTCCGCCAGTCTTTTCAGGCCCCATCTTCCACAACGCAGCTCGACGCTAAACGACCATACACATTTCACTCTACAAGAACAAGAACAAGCCCCTCTGCTACCTACTACCCTTTTTGTTCTTATTCCTTTCAAAATCCATAATCGCCCGCTTCAGCCTTCTGCCCTCTGTTTTTCGCAATCCAAAACAGAGAAAAGGGGTTTCTGATGGCGCCATATTATCTTAAAACTCATCGGAATCGGAGCCACCGCCGCGGTGCCTCCGATGGGTTGCCGTTTATGAGCGATGAATGCTTGATTGAAATGGTCGAGAAGGAAACCCATCACTTGCCTCTTCATGGGTACCTCCTGAAGTTCCACAACGGCGACTTGGATGTTCGAGCAAGAACAGAGGCCGTCGATTGGATTAAAAAGGTGAGTACTCATTTCAGATTTGGACCTCTCTGTATATACTTAGCCGTAAATTACTTGGATCGCTTCCTCTCCGCTTATGATCTACCCAAAGGCAGAGCTTGGACAATGCAGCTGCTTGCTGTGGCATGTATGTCCCTTGCAGCTAAATTGGAGGAGACAGAAGTCCCTCTCTCATTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTGTTGACAACATTGGGATGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATCGATCATTACCTTCGAAAGATCCACTACGACGAATTCTCTCTCGAAATGTCAATCGAGCAATCGAGTCGTCTACTCTTGAACATAATACATGGTATCGAGTTCTTGGAATTCAAACCATCGGAGATTGCAGCAGCTGTGGCGATATCAGTCGCCGGGGAAGCTCAATCAGTGGACCCTGATAGAGCAATTCATCTTCTAATTCAGCAACTCCAAATGGAAAGAGTTCTTAAGTGTCTTAAGTTAATCGATGACATGTTCGTCTGCGGGGGTGGGTTGGGGAAGGGCTCGAGAGCGTCGATGTCGTCGGAGCGACGGAGCCCGAGCAGGGTGTTGGAGATGACATGCTTAAGCTATACAAGCAATGACACAGCAGTTGTGTCGTGTGCAAACTCAAATGCTACAAAGAGGAGGAGATTGAACAGACCCTGTGAAGTAAATTTTTGATGTGGTAATTTTAAAATAACAGCGGTAATTTTAAAGGAACAGAAGGAGGAGGAAGTGGGAAGTGTTTGATTGTGAGATACACTTTCTTCTACGTGGCTAATTTGTATTGGCTGAGACCAAAAAAAGGAAAACCAAAGAAATAAAAAAAAATTAAATTGTCTTTTTTTTTTTTTTTAATATAAATTATGGAATTGTTTAATATATATTTTGTTGAGTCATTTAAATAGTGTCTTGTAAACGCAGTATGAGCAGAGAGTTGACAGCGCTTTGTGTTGACTATTGGTCTAACTATGACTGGGTTTTGTTCTTTAGCTTATGTGGTAAAACCCCATC

Coding sequence (CDS)

ATGGCGCCATATTATCTTAAAACTCATCGGAATCGGAGCCACCGCCGCGGTGCCTCCGATGGGTTGCCGTTTATGAGCGATGAATGCTTGATTGAAATGGTCGAGAAGGAAACCCATCACTTGCCTCTTCATGGGTACCTCCTGAAGTTCCACAACGGCGACTTGGATGTTCGAGCAAGAACAGAGGCCGTCGATTGGATTAAAAAGGTGAGTACTCATTTCAGATTTGGACCTCTCTGTATATACTTAGCCGTAAATTACTTGGATCGCTTCCTCTCCGCTTATGATCTACCCAAAGGCAGAGCTTGGACAATGCAGCTGCTTGCTGTGGCATGTATGTCCCTTGCAGCTAAATTGGAGGAGACAGAAGTCCCTCTCTCATTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTGTTGACAACATTGGGATGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATCGATCATTACCTTCGAAAGATCCACTACGACGAATTCTCTCTCGAAATGTCAATCGAGCAATCGAGTCGTCTACTCTTGAACATAATACATGGTATCGAGTTCTTGGAATTCAAACCATCGGAGATTGCAGCAGCTGTGGCGATATCAGTCGCCGGGGAAGCTCAATCAGTGGACCCTGATAGAGCAATTCATCTTCTAATTCAGCAACTCCAAATGGAAAGAGTTCTTAAGTGTCTTAAGTTAATCGATGACATGTTCGTCTGCGGGGGTGGGTTGGGGAAGGGCTCGAGAGCGTCGATGTCGTCGGAGCGACGGAGCCCGAGCAGGGTGTTGGAGATGACATGCTTAAGCTATACAAGCAATGACACAGCAGTTGTGTCGTGTGCAAACTCAAATGCTACAAAGAGGAGGAGATTGAACAGACCCTGTGAAGTAAATTTTTGA

Protein sequence

MAPYYLKTHRNRSHRRGASDGLPFMSDECLIEMVEKETHHLPLHGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFGPLCIYLAVNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHYDEFSLEMSIEQSSRLLLNIIHGIEFLEFKPSEIAAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMFVCGGGLGKGSRASMSSERRSPSRVLEMTCLSYTSNDTAVVSCANSNATKRRRLNRPCEVNF
Homology
BLAST of CmaCh05G005300 vs. ExPASy Swiss-Prot
Match: P42752 (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 252.7 bits (644), Expect = 5.6e-66
Identity = 143/301 (47.51%), Postives = 201/301 (66.78%), Query Frame = 0

Query: 25  MSDECLIEMVEKETHHLPLHGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFGPLCIYLA 84
           +S++ + EM+ +E    P   Y+ +  +GDLD+  R +A+DWI KV  H+ FG LCI L+
Sbjct: 62  LSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLS 121

Query: 85  VNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTI 144
           +NYLDRFL++Y+LPK + W  QLLAV+C+SLA+K+EET+VP  +DLQV   KFVFEA+TI
Sbjct: 122 MNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTI 181

Query: 145 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHYDEFSLEMSIEQSSRLLLNIIHGIEFLE 204
           +RMELLV+TTL WR+QA+TPFSFID+++ KI       E  I +SSR +LN    IEFL+
Sbjct: 182 KRMELLVVTTLNWRLQALTPFSFIDYFVDKI--SGHVSENLIYRSSRFILNTTKAIEFLD 241

Query: 205 FKPSEI--AAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMF----VCGG 264
           F+PSEI  AAAV++S++GE + +D ++A+  LI  ++ ERV +CL L+  +     V G 
Sbjct: 242 FRPSEIAAAAAVSVSISGETECIDEEKALSSLI-YVKQERVKRCLNLMRSLTGEENVRGT 301

Query: 265 GLG-KGSRASMSSERRSPSRVLEMTCLSYTSNDTAVVSCANS------------NATKRR 307
            L  + +R ++ +   SP  VLE TCLSY S +  V SC NS            N+ KRR
Sbjct: 302 SLSQEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTNSSQSSPDNNNNNNNSNKRR 359

BLAST of CmaCh05G005300 vs. ExPASy Swiss-Prot
Match: Q4KYM5 (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 8.0e-65
Identity = 142/299 (47.49%), Postives = 189/299 (63.21%), Query Frame = 0

Query: 20  DGLPFMSDECLIEMVEKETHHLPL--HGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFG 79
           D  P  S+EC+  +VE+E  H+P   +G  L+   GD+D+R R+EA+ WI +V T++ F 
Sbjct: 68  DMFPRQSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFS 127

Query: 80  PLCIYLAVNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKF 139
            +  YLAVNYLDRFLS Y+LP+GR W  QLL+VAC+S+AAK+EET VP  LDLQ+G  +F
Sbjct: 128 SVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRF 187

Query: 140 VFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHYDEFSLEMSIEQSSRLLLNII 199
           +FE  TI RMELLVLT L WRMQAVTPFS+ID++LRK++    +    + +SS L+L I 
Sbjct: 188 LFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIA 247

Query: 200 HGIEFLEFKPSEIAAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMFVCG 259
            G  FLEF+PSEIAAAVA +VAGEA  V  +  I      +   RVL+C + I D     
Sbjct: 248 AGTGFLEFRPSEIAAAVAATVAGEATGV-VEEDIAEAFTHVDKGRVLQCQEAIQDHHYSM 307

Query: 260 GGLG----------KGS-RASMSSERRSPSRVLEMTCLSYTSNDTAVVSCANSNATKRR 306
             +           +GS  AS SS   SP  VL+  CLSY S+DT   + A+    +R+
Sbjct: 308 ATINTVQPKPASTRRGSASASSSSVPESPVAVLDAGCLSYKSDDTDAATIASHGGGRRK 365

BLAST of CmaCh05G005300 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 3.4e-63
Identity = 138/276 (50.00%), Postives = 180/276 (65.22%), Query Frame = 0

Query: 26  SDECLIEMVEKETHHLPLHGYLLKFH----NGDLDVRARTEAVDWIKKVSTHFRFGPLCI 85
           S+EC+  +VE E  H+P   Y  +      +GDLD+R R +A+DWI KV +++ F PL  
Sbjct: 65  SEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTA 124

Query: 86  YLAVNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEA 145
            LAVNYLDRFLS Y LP G+ W  QLLAVAC+SLAAK+EET+VP SLDLQVG  ++VFEA
Sbjct: 125 CLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEA 184

Query: 146 RTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHYDEFSLEMSIEQSSRLLLNIIHGIE 205
           +TI+RMELLVL+TL WRMQAVTPFS++D++LR+++  +     S   SS L+L I  G E
Sbjct: 185 KTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSSELILCIARGTE 244

Query: 206 FLEFKPSEIAAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMFVCGGGLG 265
            L F+PSEIAAAVA +V GE          H     +  ER+  C ++I  M +      
Sbjct: 245 CLGFRPSEIAAAVAAAVVGEE---------HAAFSHVNKERMSHCQEVIQAMELIHPKPS 304

Query: 266 KGSRASMSSE-RRSPSRVLEMT-CLSYTSNDTAVVS 296
             SR  +SS   RSP+ VL+   CLSY S+D+AV S
Sbjct: 305 SPSRVFVSSSIPRSPTGVLDAAGCLSYRSDDSAVAS 331

BLAST of CmaCh05G005300 vs. ExPASy Swiss-Prot
Match: Q8LGA1 (Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 3.9e-59
Identity = 128/274 (46.72%), Postives = 184/274 (67.15%), Query Frame = 0

Query: 26  SDECLIEMVEKETHHLPLHGYLLKFHNGDLDVR-ARTEAVDWIKKVSTHFRFGPLCIYLA 85
           S+E ++EMVEKE  HLP   Y+ +  +GDLD+   R +A++WI K     +FGPLC  LA
Sbjct: 43  SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102

Query: 86  VNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTI 145
           +NYLDRFLS +DLP G+ W +QLLAVAC+SLAAK+EETEVP+ +DLQVG  +FVFEA+++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162

Query: 146 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKI-HYDEFSLEMSIEQSSRLLLNIIHGIEFL 205
           +RMELLVL  L WR++A+TP S+I ++LRK+   D+      I +S +++ +   GI+FL
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFL 222

Query: 206 EFKPSEIAAAVAISVAGEAQSVDPDR-AIHLLIQQLQMERVLKCLKLI--DDMFVCGGGL 265
           EF+PSE+AAAVA+SV+GE Q V  D  +   L   LQ ERV K  ++I  D   +C    
Sbjct: 223 EFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGSDLCS--- 282

Query: 266 GKGSRASMSSERRSPSRVLEMT--CLSYTSNDTA 293
                       ++P+ VLE++  C S+ ++D++
Sbjct: 283 ------------QTPNGVLEVSACCFSFKTHDSS 301

BLAST of CmaCh05G005300 vs. ExPASy Swiss-Prot
Match: Q0WQN9 (Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 5.6e-58
Identity = 111/202 (54.95%), Postives = 147/202 (72.77%), Query Frame = 0

Query: 21  GLPFMSDECLIEMVEKETHHLPLHGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFGPLC 80
           G P  S+E + EM+EKE  H P   YL +  NGDLD   R +A+ WI K     +FGPLC
Sbjct: 30  GFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLC 89

Query: 81  IYLAVNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFE 140
           I LA+NYLDRFLS +DLP G+AWT+QLLAVAC+SLAAK+EET VP  + LQVG   FVFE
Sbjct: 90  ICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFE 149

Query: 141 ARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIH-YDEFSLEMSIEQSSRLLLNIIHG 200
           A++++RMELLVL  L WR++AVTP S++ ++L KI+ YD+      + +S +++ +   G
Sbjct: 150 AKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKG 209

Query: 201 IEFLEFKPSEIAAAVAISVAGE 222
           I+FLEF+ SEIAAAVA+SV+GE
Sbjct: 210 IDFLEFRASEIAAAVALSVSGE 231

BLAST of CmaCh05G005300 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 256.9 bits (655), Expect = 2.1e-68
Identity = 144/301 (47.84%), Postives = 200/301 (66.45%), Query Frame = 0

Query: 25  MSDECLIEMVEKETHHLPLHGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFGPLCIYLA 84
           +S++ + EM+ +E    P   Y+ +  +GDLD+  R +A+DWI KV  H+ FG LCI L+
Sbjct: 62  LSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLS 121

Query: 85  VNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTI 144
           +NYLDRFL++Y+LPK + W  QLLAV+C+SLA+K+EET+VP  +DLQV   KFVFEA+TI
Sbjct: 122 MNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTI 181

Query: 145 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHYDEFSLEMSIEQSSRLLLNIIHGIEFLE 204
           +RMELLV+TTL WR+QA+TPFSFID+++ KI       E  I +SSR +LN    IEFL+
Sbjct: 182 KRMELLVVTTLNWRLQALTPFSFIDYFVDKI--SGHVSENLIYRSSRFILNTTKAIEFLD 241

Query: 205 FKPSEI--AAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMF----VCGG 264
           F+PSEI  AAAV++S++GE + +D ++A+  LI   Q ERV +CL L+  +     V G 
Sbjct: 242 FRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQQERVKRCLNLMRSLTGEENVRGT 301

Query: 265 GLG-KGSRASMSSERRSPSRVLEMTCLSYTSNDTAVVSCANS------------NATKRR 307
            L  + +R ++ +   SP  VLE TCLSY S +  V SC NS            N+ KRR
Sbjct: 302 SLSQEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTNSSQSSPDNNNNNNNSNKRR 360

BLAST of CmaCh05G005300 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-67
Identity = 143/301 (47.51%), Postives = 201/301 (66.78%), Query Frame = 0

Query: 25  MSDECLIEMVEKETHHLPLHGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFGPLCIYLA 84
           +S++ + EM+ +E    P   Y+ +  +GDLD+  R +A+DWI KV  H+ FG LCI L+
Sbjct: 62  LSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLS 121

Query: 85  VNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTI 144
           +NYLDRFL++Y+LPK + W  QLLAV+C+SLA+K+EET+VP  +DLQV   KFVFEA+TI
Sbjct: 122 MNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTI 181

Query: 145 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHYDEFSLEMSIEQSSRLLLNIIHGIEFLE 204
           +RMELLV+TTL WR+QA+TPFSFID+++ KI       E  I +SSR +LN    IEFL+
Sbjct: 182 KRMELLVVTTLNWRLQALTPFSFIDYFVDKI--SGHVSENLIYRSSRFILNTTKAIEFLD 241

Query: 205 FKPSEI--AAAVAISVAGEAQSVDPDRAIHLLIQQLQMERVLKCLKLIDDMF----VCGG 264
           F+PSEI  AAAV++S++GE + +D ++A+  LI  ++ ERV +CL L+  +     V G 
Sbjct: 242 FRPSEIAAAAAVSVSISGETECIDEEKALSSLI-YVKQERVKRCLNLMRSLTGEENVRGT 301

Query: 265 GLG-KGSRASMSSERRSPSRVLEMTCLSYTSNDTAVVSCANS------------NATKRR 307
            L  + +R ++ +   SP  VLE TCLSY S +  V SC NS            N+ KRR
Sbjct: 302 SLSQEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTNSSQSSPDNNNNNNNSNKRR 359

BLAST of CmaCh05G005300 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-60
Identity = 128/274 (46.72%), Postives = 184/274 (67.15%), Query Frame = 0

Query: 26  SDECLIEMVEKETHHLPLHGYLLKFHNGDLDVR-ARTEAVDWIKKVSTHFRFGPLCIYLA 85
           S+E ++EMVEKE  HLP   Y+ +  +GDLD+   R +A++WI K     +FGPLC  LA
Sbjct: 43  SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102

Query: 86  VNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTI 145
           +NYLDRFLS +DLP G+ W +QLLAVAC+SLAAK+EETEVP+ +DLQVG  +FVFEA+++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162

Query: 146 ERMELLVLTTLGWRMQAVTPFSFIDHYLRKI-HYDEFSLEMSIEQSSRLLLNIIHGIEFL 205
           +RMELLVL  L WR++A+TP S+I ++LRK+   D+      I +S +++ +   GI+FL
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFL 222

Query: 206 EFKPSEIAAAVAISVAGEAQSVDPDR-AIHLLIQQLQMERVLKCLKLI--DDMFVCGGGL 265
           EF+PSE+AAAVA+SV+GE Q V  D  +   L   LQ ERV K  ++I  D   +C    
Sbjct: 223 EFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGSDLCS--- 282

Query: 266 GKGSRASMSSERRSPSRVLEMT--CLSYTSNDTA 293
                       ++P+ VLE++  C S+ ++D++
Sbjct: 283 ------------QTPNGVLEVSACCFSFKTHDSS 301

BLAST of CmaCh05G005300 vs. TAIR 10
Match: AT5G10440.1 (cyclin d4;2 )

HSP 1 Score: 226.1 bits (575), Expect = 4.0e-59
Identity = 111/202 (54.95%), Postives = 147/202 (72.77%), Query Frame = 0

Query: 21  GLPFMSDECLIEMVEKETHHLPLHGYLLKFHNGDLDVRARTEAVDWIKKVSTHFRFGPLC 80
           G P  S+E + EM+EKE  H P   YL +  NGDLD   R +A+ WI K     +FGPLC
Sbjct: 30  GFPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLC 89

Query: 81  IYLAVNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFE 140
           I LA+NYLDRFLS +DLP G+AWT+QLLAVAC+SLAAK+EET VP  + LQVG   FVFE
Sbjct: 90  ICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFE 149

Query: 141 ARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIH-YDEFSLEMSIEQSSRLLLNIIHG 200
           A++++RMELLVL  L WR++AVTP S++ ++L KI+ YD+      + +S +++ +   G
Sbjct: 150 AKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKG 209

Query: 201 IEFLEFKPSEIAAAVAISVAGE 222
           I+FLEF+ SEIAAAVA+SV+GE
Sbjct: 210 IDFLEFRASEIAAAVALSVSGE 231

BLAST of CmaCh05G005300 vs. TAIR 10
Match: AT5G65420.3 (CYCLIN D4;1 )

HSP 1 Score: 223.8 bits (569), Expect = 2.0e-58
Identity = 129/284 (45.42%), Postives = 185/284 (65.14%), Query Frame = 0

Query: 26  SDECLIEMVEKETHHLPLHGYLLKFHNGDLDVR-ARTEAVDWIKKVSTHFR--------- 85
           S+E ++EMVEKE  HLP   Y+ +  +GDLD+   R +A++WI K+    R         
Sbjct: 43  SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVH 102

Query: 86  -FGPLCIYLAVNYLDRFLSAYDLPKGRAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGG 145
            FGPLC  LA+NYLDRFLS +DLP G+ W +QLLAVAC+SLAAK+EETEVP+ +DLQVG 
Sbjct: 103 QFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGD 162

Query: 146 SKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKI-HYDEFSLEMSIEQSSRLL 205
            +FVFEA++++RMELLVL  L WR++A+TP S+I ++LRK+   D+      I +S +++
Sbjct: 163 PQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVI 222

Query: 206 LNIIHGIEFLEFKPSEIAAAVAISVAGEAQSVDPDR-AIHLLIQQLQMERVLKCLKLI-- 265
            +   GI+FLEF+PSE+AAAVA+SV+GE Q V  D  +   L   LQ ERV K  ++I  
Sbjct: 223 ASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMIES 282

Query: 266 DDMFVCGGGLGKGSRASMSSERRSPSRVLEMT--CLSYTSNDTA 293
           D   +C                ++P+ VLE++  C S+ ++D++
Sbjct: 283 DGSDLCS---------------QTPNGVLEVSACCFSFKTHDSS 311

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P427525.6e-6647.51Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3[more]
Q4KYM58.0e-6547.49Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2[more]
Q6YXH83.4e-6350.00Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2[more]
Q8LGA13.9e-5946.72Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2[more]
Q0WQN95.6e-5854.95Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
AT2G22490.22.1e-6847.84Cyclin D2;1 [more]
AT2G22490.13.9e-6747.51Cyclin D2;1 [more]
AT5G65420.12.7e-6046.72CYCLIN D4;1 [more]
AT5G10440.14.0e-5954.95cyclin d4;2 [more]
AT5G65420.32.0e-5845.42CYCLIN D4;1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 162..287
e-value: 2.3E-5
score: 33.8
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 162..254
e-value: 4.7E-9
score: 36.4
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 65..153
e-value: 5.5E-19
score: 79.1
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 60..152
e-value: 2.29682E-16
score: 71.1156
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 33..159
e-value: 6.3E-29
score: 100.3
IPR006671Cyclin, N-terminalPROSITEPS00292CYCLINScoord: 60..91
NoneNo IPR availableGENE3D1.10.472.10coord: 43..160
e-value: 6.5E-47
score: 161.7
NoneNo IPR availableGENE3D1.10.472.10coord: 32..247
e-value: 6.5E-47
score: 161.7
NoneNo IPR availablePANTHERPTHR10177:SF446CARBOXY-TERMINAL DOMAIN CYCLINcoord: 14..305
IPR039361CyclinPANTHERPTHR10177CYCLINScoord: 14..305
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 145..254
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 24..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G005300.1CmaCh05G005300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0051301 cell division