CmaCh05G005260 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G005260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GEM-like protein 1
Location	Cma_Chr05: 2512728 .. 2516141 (+)
RNA-Seq Expression	CmaCh05G005260
Synteny	CmaCh05G005260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGAGAGAAAAAGATCAAACAAAATATCAGATGCGAAGAAACGAATAAAAACACCGTCGATTTCATACTCAGCCGTTTCCCTTCCAAACTGATTCAGTTCTTCTCGTTTATTTCACCGGCGCCGGAGATCGATTTGAACTATTCTCATCCACTCTCAAATGAGTCAGTCTCAGCCACAGCCTCAGCCTCAGCCTGATCCATCCAATCCACTCCCTCCTAAACCGTCGCACTCCGATCACCCGGATCCGATTACCGATCATCGCTCCGGCGAATATTCTCCCTATCCCAAGCTTGACCCTAGCGATGTTGCTCCGCCGCTGATGCCGGAGAACTGGACCACTGTCCCCATGAGCTCCCAACCCCAACATCCTCCTCCACCTCAAACTCAGCCGAACAGTGAGCCTCGTGCTCCGATCTCTGAGGGAAATGCTACCACTCTGCCGACTGAAGCTAATCCCTATGTTTCTGCGGCTCCAGCCTGTGGAAATCCATCTTCCGCCAAGAGTATGTGGTCGATTTCCCTAGATGTTAATATTTATTGAGCGTTTAGAATTAAATGAAATTCGAATTCGATAGATGTGCATGCTTGATGTATGATCAGATACGGTGGATTCCATGAAGGAGATGCTTGGAAGATGGGGGAAGAAGGCTGCTGAGGCAACCAAGAAGGCCGAGGATCTTGCTGGAAATATGTGGCAGCACTGTAAACCCTTCATTCTTTTAAATAATCAACGCGTTCTTTACCTTCTCATCACTACTGATAAATTTGAATTCAAGTTTAAAATAAATGATGAACTTGTAGGTGGTTAAGATGAGAAATTACAAGACTCTGATAGCACACGCAACTGTATGCCGACTTTGATTGGAATATAGTTTACGTCCATATAAACACAGATCTTAGAAAACCTACAATTGTTCTTCTAAGGATACTGGCATTAAGCGTTTTCCTGGAACTATTTCTCATTTGTTTTACTTTCATTATGTGCTCTGCTGTTTTATGTGTTGTGACTTCCATTGAATGAGCTGTGTTCTTTCTTATTGCCTGAGCTTGAATTTTGGATTACCTTTTATTTGGTACTATAAGCTTTTTCCGTTGAGGATTGTTTTTTCTGTTGAGGATTGTTGAGAGAGGAAGTCCCATGTTGGCTAATTAAATGGACGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGGGAAAACCAAAAGTAAAGCCACGAGAGTTTATGCTCAAAGTGCACAATATCATACTATTATGGAGTTCCATGGTTTTTAACATTTTCTACACCTACTCATTTGTTTGGGATAGTGACTTTAAATACGACAATTTTAAAACACTCTTTATCATTCTTTTTGGAACTTTTTACTTGCTTCTGTTAAGCAATAATGATAAGTTGAAACAATCTTGTTTCAAACCAGTGAAAACAGGGCCTAGCATTACTGATGCTGCTGTGGCAAGAATTGCTCAAGGGACGAAAGTTCTTGCAGAAGGTGGTTATGAGAAGATCTTCCGACAGACTTTTGAGAGTATACCGGAAGAGAAACTTCAGAAGGCGTTTGCATGCTACTTATCCACATCAGCTGGTCCAGTGATGGGAACTTTGTACGTATCAACGGCTAAACTTGCCTTTTGCAGTGACGATCCTCTTTCGTACAAAGTCGGCGAGGAGACTCAATGGAGCCTTTACAAGGTAAAACTGAATTGTTGAATCTTACTGTTCGTTAAGTAGTCGATAATTAGATGAATCTAAAAGTTTTGGTTGAATTGATGCCAATTCAAGTGAAGAAGATGTGAAGAATGGGCCATCAATATTTATGAAAGTGAGGAAGTTAGAACTTGGGAACTCTTGCTGAGTATGGGTAATGCACCATTAATGGTCTATATTGGGAGATCTCACGTTAGTTGGAGAGGAGAACAAAACATTCCTTATAAGGGTGTGGATATCTCTCCCTAGTAGATGCATGTTAAAACAGTGAGGTTAACGGCAATACATGACAGGCAAAAGCGGACAATATGTGCTAGCGATGGGATTGAGCTGTTTCATATATGCTCAATATGTGCTAGCTATATTGTGAGATCTCACGTTAGTTGGAGAGGAGAACAAAACATTTCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGCATGTTAAAACAGTGAGGCTAACGGCAATACATAACAGACAAAAGCGGACAAATATGTGCTAGCGATGAAATTGAGCTGTTTCATATATGCTGCACTTTCTTAGAAGGAAGAAAAAAAAAAAGTTTATATGAGGTGCAAACTGCTTCAATTTTATACATATTCCATCCCAGTAACTAGAGTAAACTCAAGTCAGATTCCAACTTCTCTATCCCGACCTCCCAGTTTCCTCTTGAATCAGTCTGATTGCCTCAAATCCAAATCCAGAATCATGAGACCCTTAAATCCATTTTTTAATGTTTGAGAACATTATTTCAATCACATGGTCAATAAAATTTCATTGGAACTCTGTTCTGGATCAACTGCAAAGCCTGAAAGATTATGCATTTTAGATTTAAGAATTTTTGCAACATCTTACAAGTTTCAGAGGGTCATCTTCTTCTAATAATTAAACGCATGCATACTTATCCTTTTGTTCATTACTGCAAAATTTTATTCGATTCTAAAATCTGGAGTGTTGATCAAGCGATTGCTCAGTTGATCTGTGGTTTCTTCTTTATTATCATTTTGTATTGATGATGCATGATTTTCCCCTATGTTGTGTTCATGATGAATGTATACTTCGATTTGATTATGACGTTTGGAGTTGCATCCTCTTCTATGCTTGGACAATGACCATGGCCAGCTCTTGTATTGCCCATCTTTACTTCATATAGGTTGCTGAGGTTCTATAACAAAAATTGATTAGAAATCACCTGTATCTTCTGTTATATGATAGGTGGTGATCCCGCTGCATCACCTGAAGGCAGTCAACCCATCAACAAGCAAAGCAAAACCGGCTGAAAAGTTCATACAAGTTATCTCCATTGACAACCATGAATTCTGGTTCATGGGCTTTGTATATTATGATAGTGCAGTCAAAATTCTTCGAGAAGCCCTGCAGCCCAACAATCCATTGTCTGTGTGAAAATCTTGTGAGGGCTGACACTTCTGGATCATGAACTTTTTTACCTGGTCACCCACAGTAAGAATTGAAGTAAGTCAAGATTTTGATGTTATATACAACAAATTACTGTAGAAATACCGTACCTCTGTAGTTTTGCTAGCAATGTTGTCTTTATGGACTTCATCATCATTCATATTTGTTTTCTCTACTGTGTATGGAGTGAAAAATTTGAAGTTGTTTGAACTTTTGTTGATGATATCTGTAATTTTGTTGATTGAAAGGTAAATAGTATTGATGATTGAATA

mRNA sequence

AGAAGAGAGAAAAAGATCAAACAAAATATCAGATGCGAAGAAACGAATAAAAACACCGTCGATTTCATACTCAGCCGTTTCCCTTCCAAACTGATTCAGTTCTTCTCGTTTATTTCACCGGCGCCGGAGATCGATTTGAACTATTCTCATCCACTCTCAAATGAGTCAGTCTCAGCCACAGCCTCAGCCTCAGCCTGATCCATCCAATCCACTCCCTCCTAAACCGTCGCACTCCGATCACCCGGATCCGATTACCGATCATCGCTCCGGCGAATATTCTCCCTATCCCAAGCTTGACCCTAGCGATGTTGCTCCGCCGCTGATGCCGGAGAACTGGACCACTGTCCCCATGAGCTCCCAACCCCAACATCCTCCTCCACCTCAAACTCAGCCGAACAGTGAGCCTCGTGCTCCGATCTCTGAGGGAAATGCTACCACTCTGCCGACTGAAGCTAATCCCTATGTTTCTGCGGCTCCAGCCTGTGGAAATCCATCTTCCGCCAAGAATACGGTGGATTCCATGAAGGAGATGCTTGGAAGATGGGGGAAGAAGGCTGCTGAGGCAACCAAGAAGGCCGAGGATCTTGCTGGAAATATGTGGCAGCACTTGAAAACAGGGCCTAGCATTACTGATGCTGCTGTGGCAAGAATTGCTCAAGGGACGAAAGTTCTTGCAGAAGGTGGTTATGAGAAGATCTTCCGACAGACTTTTGAGAGTATACCGGAAGAGAAACTTCAGAAGGCGTTTGCATGCTACTTATCCACATCAGCTGGTCCAGTGATGGGAACTTTGTACGTATCAACGGCTAAACTTGCCTTTTGCAGTGACGATCCTCTTTCGTACAAAGTCGGCGAGGAGACTCAATGGAGCCTTTACAAGGTGGTGATCCCGCTGCATCACCTGAAGGCAGTCAACCCATCAACAAGCAAAGCAAAACCGGCTGAAAAGTTCATACAAGTTATCTCCATTGACAACCATGAATTCTGGTTCATGGGCTTTGTATATTATGATAGTGCAGTCAAAATTCTTCGAGAAGCCCTGCAGCCCAACAATCCATTGTCTGTGTGAAAATCTTGTGAGGGCTGACACTTCTGGATCATGAACTTTTTTACCTGGTCACCCACAGTAAGAATTGAAGTAAGTCAAGATTTTGATGTTATATACAACAAATTACTGTAGAAATACCGTACCTCTGTAGTTTTGCTAGCAATGTTGTCTTTATGGACTTCATCATCATTCATATTTGTTTTCTCTACTGTGTATGGAGTGAAAAATTTGAAGTTGTTTGAACTTTTGTTGATGATATCTGTAATTTTGTTGATTGAAAGGTAAATAGTATTGATGATTGAATA

Coding sequence (CDS)

ATGAGTCAGTCTCAGCCACAGCCTCAGCCTCAGCCTGATCCATCCAATCCACTCCCTCCTAAACCGTCGCACTCCGATCACCCGGATCCGATTACCGATCATCGCTCCGGCGAATATTCTCCCTATCCCAAGCTTGACCCTAGCGATGTTGCTCCGCCGCTGATGCCGGAGAACTGGACCACTGTCCCCATGAGCTCCCAACCCCAACATCCTCCTCCACCTCAAACTCAGCCGAACAGTGAGCCTCGTGCTCCGATCTCTGAGGGAAATGCTACCACTCTGCCGACTGAAGCTAATCCCTATGTTTCTGCGGCTCCAGCCTGTGGAAATCCATCTTCCGCCAAGAATACGGTGGATTCCATGAAGGAGATGCTTGGAAGATGGGGGAAGAAGGCTGCTGAGGCAACCAAGAAGGCCGAGGATCTTGCTGGAAATATGTGGCAGCACTTGAAAACAGGGCCTAGCATTACTGATGCTGCTGTGGCAAGAATTGCTCAAGGGACGAAAGTTCTTGCAGAAGGTGGTTATGAGAAGATCTTCCGACAGACTTTTGAGAGTATACCGGAAGAGAAACTTCAGAAGGCGTTTGCATGCTACTTATCCACATCAGCTGGTCCAGTGATGGGAACTTTGTACGTATCAACGGCTAAACTTGCCTTTTGCAGTGACGATCCTCTTTCGTACAAAGTCGGCGAGGAGACTCAATGGAGCCTTTACAAGGTGGTGATCCCGCTGCATCACCTGAAGGCAGTCAACCCATCAACAAGCAAAGCAAAACCGGCTGAAAAGTTCATACAAGTTATCTCCATTGACAACCATGAATTCTGGTTCATGGGCTTTGTATATTATGATAGTGCAGTCAAAATTCTTCGAGAAGCCCTGCAGCCCAACAATCCATTGTCTGTGTGA

Protein sequence

MSQSQPQPQPQPDPSNPLPPKPSHSDHPDPITDHRSGEYSPYPKLDPSDVAPPLMPENWTTVPMSSQPQHPPPPQTQPNSEPRAPISEGNATTLPTEANPYVSAAPACGNPSSAKNTVDSMKEMLGRWGKKAAEATKKAEDLAGNMWQHLKTGPSITDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLSTSAGPVMGTLYVSTAKLAFCSDDPLSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPAEKFIQVISIDNHEFWFMGFVYYDSAVKILREALQPNNPLSV

Homology

[Close]

BLAST of CmaCh05G005260 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.6e-86
Identity = 165/278 (59.35%), Postives = 203/278 (73.02%), Query Frame = 0


Query: 22  PSHSDHPDPITDHRSGEYSPYPKLDPSDVAPPLMPENWTTVPMSSQPQHPPPPQTQPNSE 81
           P+ +  P     H S +Y+PYPKLDP+DV                    PPPPQ  P   
Sbjct: 16  PAAASEPSKAAAH-SSDYAPYPKLDPTDVT-------------------PPPPQPIPTG- 75

Query: 82  PRAPISEGNATTLPTEANPYVSAAPACGNPSSAKNTVDSMKEMLGRWGKKAAEATKKAED 141
                    ATT+P E+NPYVS +PA       +NT+DS+K+ LG+WGK AA+ATKKAED
Sbjct: 76  -------AAATTMPAESNPYVSPSPA------PRNTMDSVKDTLGKWGKMAADATKKAED 135

Query: 142 LAGNMWQHLKTGPSITDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLS 201
           LAGN WQHLKTGPS+ DAAV+RIAQGTK+LAEGGYEK+F+QTF+ +P+EKL K +ACYLS
Sbjct: 136 LAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLS 195

Query: 202 TSAGPVMGTLYVSTAKLAFCSDDPLSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPA 261
           TSAGPV+G +Y+ST KLAF SD+PLSYK GE+T WS YKVV+P + LKAVNPSTS+   +
Sbjct: 196 TSAGPVLGVMYLSTHKLAFSSDNPLSYKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTS 255

Query: 262 EKFIQVISIDNHEFWFMGFVYYDSAVKILREALQPNNP 300
           +K+IQVISIDNHEFWFMGFV Y+SAVK L+EA+Q + P
Sbjct: 256 DKYIQVISIDNHEFWFMGFVTYESAVKSLQEAVQSHGP 259

[Close]

BLAST of CmaCh05G005260 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 8.2e-75
Identity = 146/248 (58.87%), Postives = 182/248 (73.39%), Query Frame = 0


Query: 48  SDVAPPLMPENWTTVPMSSQPQHPPPPQTQPNSEPRAPISEGNATTLPTEANPYVSAAPA 107
           SD  P   P    T   S +  H  P     + EP     +  A++    +NPY++ +PA
Sbjct: 51  SDSTPVKAPSR--TSSGSKKSVHWSPELVSGSQEP----DQKAASSSSAGSNPYIARSPA 110

Query: 108 CGNPSSAKNTVDSMKEMLGRWGKKAAEATKKAEDLAGNMWQHLKTGPSITDAAVARIAQG 167
             + +S K+T++++K +LGRWGK+ AEA KK E LAGN WQHL+T PS  DAA+ RIAQ 
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 168 TKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLSTSAGPVMGTLYVSTAKLAFCSDDPLS 227
           TKV AEGGYEKIFRQTFE+ PEE+L  +FACYLSTSAGPVMG LY+S+AKLA+CSD+PLS
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

Query: 228 YKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPAEKFIQVISIDNHEFWFMGFVYYDSAV 287
           YK G++T+WS YKVVIPLH LKAVNPS S   PAEK+IQVIS+DNHEFWFMGF+ YD AV
Sbjct: 231 YKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAV 290

Query: 288 KILREALQ 296
             L+++LQ
Sbjct: 291 TSLQDSLQ 292

[Close]

BLAST of CmaCh05G005260 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-61
Identity = 125/216 (57.87%), Postives = 153/216 (70.83%), Query Frame = 0


Query: 80  SEPRAPISEGNATTLPTEANPYVSAAPACGNPSSAKNTVDSMKEMLGRWGKKAAEATKKA 139
           SE  AP  +  +++    +NPYV+ AP   + +S K T++S+K +LGRWG++  EA  KA
Sbjct: 36  SESPAPDEKALSSSSAARSNPYVARAPTETSDASLKETMESVKGVLGRWGRRVGEAAMKA 95

Query: 140 EDLAGNMWQHLKTGPSITDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACY 199
           E LAGN WQH         AA+ RIAQ TKVLAEGGYEKIFRQTFE++PEE+LQ +FACY
Sbjct: 96  ESLAGNTWQH------PLRAAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACY 155

Query: 200 LSTSAGPVMGTLYVSTAKLAFCSDDPLSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAK 259
           LSTSAGPVMG LYVSTAKLA+CSD  L              VVIPLH LK+VNPS S   
Sbjct: 156 LSTSAGPVMGVLYVSTAKLAYCSDTSL--------------VVIPLHQLKSVNPSISTVN 215

Query: 260 PAEKFIQVISIDNHEFWFMGFVYYDSAVKILREALQ 296
           PAEK+IQVIS+D+HEFWFMGF+ Y+ AV  L++ LQ
Sbjct: 216 PAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTLQ 231

[Close]

BLAST of CmaCh05G005260 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-40
Identity = 87/200 (43.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 99  NPYVSAAPACGNPSSA--KNTVDSMKEMLGRWGKKAAEATKKAEDLAGNMWQHLKTGPSI 158
           NPYV       +P+SA  K + D + E+L R GKK  +AT+KAE L G +  HLK  PSI
Sbjct: 29  NPYVHIT----SPTSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSI 88

Query: 159 TDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLSTSAGPVMGTLYVSTA 218
           +DAA+AR++QGTK++ EGG E++F++ F  +  EKL  +F CY+ST++GPV G +Y+S  
Sbjct: 89  SDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNR 148

Query: 219 KLAFCSDDP--LSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPAEKFIQVISIDNHE 278
           ++AFCSD    L    G     + YKVV+    + +++ ST+  KP+E+++ +++ D  E
Sbjct: 149 RIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFE 208

Query: 279 FWFMGFVYYDSAVKILREAL 295
           FWFMGFV Y  A   L +AL
Sbjct: 209 FWFMGFVSYIDAFNCLNKAL 224

[Close]

BLAST of CmaCh05G005260 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.5e-39
Identity = 102/271 (37.64%), Postives = 151/271 (55.72%), Query Frame = 0


Query: 23  SHSDHPDPITDHR-----SGEYSPYPKLDPSDVAPPLMPENWTTVPMSSQPQHPPPPQTQ 82
           S  D P  I D         E+ P    +PS  +P    + W T  M +    P  P   
Sbjct: 4   SQEDQPKIIIDQEQPKTLETEHQP----EPSSSSPD--QKKWGTHVMGA----PAAPVAH 63

Query: 83  PNSEPRAPISEGNATTLPTEANPYVSAAPACGNPSSAKNTVDSMKEMLGRWGKKAAEATK 142
           P+++  A    G+     T+  PYV  +P      +  N ++ +  M   W       ++
Sbjct: 64  PDNQQAAAWVAGD--NQQTQYQPYVIYSPV--EHPTTNNPLEPVIGMFHTW-------SR 123

Query: 143 KAEDLAGNMWQHLKTGPSITDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFA 202
           KAE +A N+W +LKTGPS+++ A  ++    K + +GG+E +FRQ F + P E L+K FA
Sbjct: 124 KAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFA 183

Query: 203 CYLSTSAGPVMGTLYVSTAKLAFCSDDPLSYKV--GEETQWSLYKVVIPLHHLKAVNPST 262
           CYLST+ GPV GT+Y+S A++AFCSD PL +    G+E+ WS Y+VV+PL ++  VNP  
Sbjct: 184 CYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQES-WSYYRVVVPLANVATVNPVV 243

Query: 263 SKAKPAEKFIQVISIDNHEFWFMGFVYYDSA 287
            K  P EK+IQ+ ++D H+FWFMGFV Y+ A
Sbjct: 244 VKETPPEKYIQLTTVDGHDFWFMGFVNYEKA 252

[Close]

BLAST of CmaCh05G005260 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 )

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-87
Identity = 165/278 (59.35%), Postives = 203/278 (73.02%), Query Frame = 0


Query: 22  PSHSDHPDPITDHRSGEYSPYPKLDPSDVAPPLMPENWTTVPMSSQPQHPPPPQTQPNSE 81
           P+ +  P     H S +Y+PYPKLDP+DV                    PPPPQ  P   
Sbjct: 16  PAAASEPSKAAAH-SSDYAPYPKLDPTDVT-------------------PPPPQPIPTG- 75

Query: 82  PRAPISEGNATTLPTEANPYVSAAPACGNPSSAKNTVDSMKEMLGRWGKKAAEATKKAED 141
                    ATT+P E+NPYVS +PA       +NT+DS+K+ LG+WGK AA+ATKKAED
Sbjct: 76  -------AAATTMPAESNPYVSPSPA------PRNTMDSVKDTLGKWGKMAADATKKAED 135

Query: 142 LAGNMWQHLKTGPSITDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLS 201
           LAGN WQHLKTGPS+ DAAV+RIAQGTK+LAEGGYEK+F+QTF+ +P+EKL K +ACYLS
Sbjct: 136 LAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLS 195

Query: 202 TSAGPVMGTLYVSTAKLAFCSDDPLSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPA 261
           TSAGPV+G +Y+ST KLAF SD+PLSYK GE+T WS YKVV+P + LKAVNPSTS+   +
Sbjct: 196 TSAGPVLGVMYLSTHKLAFSSDNPLSYKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTS 255

Query: 262 EKFIQVISIDNHEFWFMGFVYYDSAVKILREALQPNNP 300
           +K+IQVISIDNHEFWFMGFV Y+SAVK L+EA+Q + P
Sbjct: 256 DKYIQVISIDNHEFWFMGFVTYESAVKSLQEAVQSHGP 259

[Close]

BLAST of CmaCh05G005260 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.8e-76
Identity = 146/248 (58.87%), Postives = 182/248 (73.39%), Query Frame = 0


Query: 48  SDVAPPLMPENWTTVPMSSQPQHPPPPQTQPNSEPRAPISEGNATTLPTEANPYVSAAPA 107
           SD  P   P    T   S +  H  P     + EP     +  A++    +NPY++ +PA
Sbjct: 51  SDSTPVKAPSR--TSSGSKKSVHWSPELVSGSQEP----DQKAASSSSAGSNPYIARSPA 110

Query: 108 CGNPSSAKNTVDSMKEMLGRWGKKAAEATKKAEDLAGNMWQHLKTGPSITDAAVARIAQG 167
             + +S K+T++++K +LGRWGK+ AEA KK E LAGN WQHL+T PS  DAA+ RIAQ 
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 168 TKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLSTSAGPVMGTLYVSTAKLAFCSDDPLS 227
           TKV AEGGYEKIFRQTFE+ PEE+L  +FACYLSTSAGPVMG LY+S+AKLA+CSD+PLS
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

Query: 228 YKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPAEKFIQVISIDNHEFWFMGFVYYDSAV 287
           YK G++T+WS YKVVIPLH LKAVNPS S   PAEK+IQVIS+DNHEFWFMGF+ YD AV
Sbjct: 231 YKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAV 290

Query: 288 KILREALQ 296
             L+++LQ
Sbjct: 291 TSLQDSLQ 292

[Close]

BLAST of CmaCh05G005260 vs. TAIR 10
Match: AT4G40100.1 (GRAM domain family protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-54
Identity = 114/216 (52.78%), Postives = 141/216 (65.28%), Query Frame = 0


Query: 80  SEPRAPISEGNATTLPTEANPYVSAAPACGNPSSAKNTVDSMKEMLGRWGKKAAEATKKA 139
           SE  AP  +  +++    +NPYV+ AP   + +S K T++S+K +LGRWG++  EA  KA
Sbjct: 36  SESPAPDEKALSSSSAARSNPYVARAPTETSDASLKETMESVKGVLGRWGRRVGEAAMKA 95

Query: 140 EDLAGNMWQHLKTGPSITDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACY 199
           E LAGN WQH         AA+ RIAQ TKVLAEGGYEKIFRQTFE++PEE+LQ +FACY
Sbjct: 96  ESLAGNTWQH------PLRAAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACY 155

Query: 200 LSTSAGPVMGTLYVSTAKLAFCSDDPLSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAK 259
           LSTSAGPVMG LY                            VVIPLH LK+VNPS S   
Sbjct: 156 LSTSAGPVMGVLY----------------------------VVIPLHQLKSVNPSISTVN 215

Query: 260 PAEKFIQVISIDNHEFWFMGFVYYDSAVKILREALQ 296
           PAEK+IQVIS+D+HEFWFMGF+ Y+ AV  L++ LQ
Sbjct: 216 PAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTLQ 217

[Close]

BLAST of CmaCh05G005260 vs. TAIR 10
Match: AT2G22475.2 (GRAM domain family protein )

HSP 1 Score: 202.6 bits (514), Expect = 4.5e-52
Identity = 108/197 (54.82%), Postives = 139/197 (70.56%), Query Frame = 0


Query: 48  SDVAPPLMPENWTTVPMSSQPQHPPPPQTQPNSEPRAPISEGNATTLPTEANPYVSAAPA 107
           SD  P   P    T   S +  H  P     + EP     +  A++    +NPY++ +PA
Sbjct: 51  SDSTPVKAPSR--TSSGSKKSVHWSPELVSGSQEP----DQKAASSSSAGSNPYIARSPA 110

Query: 108 CGNPSSAKNTVDSMKEMLGRWGKKAAEATKKAEDLAGNMWQHLKTGPSITDAAVARIAQG 167
             + +S K+T++++K +LGRWGK+ AEA KK E LAGN WQHL+T PS  DAA+ RIAQ 
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 168 TKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLSTSAGPVMGTLYVSTAKLAFCSDDPLS 227
           TKV AEGGYEKIFRQTFE+ PEE+L  +FACYLSTSAGPVMG LY+S+AKLA+CSD+PLS
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

Query: 228 YKVGEETQWSLYKVVIP 245
           YK G++T+WS YKV+ P
Sbjct: 231 YKNGDQTEWSYYKVMCP 241

[Close]

BLAST of CmaCh05G005260 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-41
Identity = 87/200 (43.50%), Postives = 129/200 (64.50%), Query Frame = 0


Query: 99  NPYVSAAPACGNPSSA--KNTVDSMKEMLGRWGKKAAEATKKAEDLAGNMWQHLKTGPSI 158
           NPYV       +P+SA  K + D + E+L R GKK  +AT+KAE L G +  HLK  PSI
Sbjct: 29  NPYVHIT----SPTSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSI 88

Query: 159 TDAAVARIAQGTKVLAEGGYEKIFRQTFESIPEEKLQKAFACYLSTSAGPVMGTLYVSTA 218
           +DAA+AR++QGTK++ EGG E++F++ F  +  EKL  +F CY+ST++GPV G +Y+S  
Sbjct: 89  SDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNR 148

Query: 219 KLAFCSDDP--LSYKVGEETQWSLYKVVIPLHHLKAVNPSTSKAKPAEKFIQVISIDNHE 278
           ++AFCSD    L    G     + YKVV+    + +++ ST+  KP+E+++ +++ D  E
Sbjct: 149 RIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFE 208

Query: 279 FWFMGFVYYDSAVKILREAL 295
           FWFMGFV Y  A   L +AL
Sbjct: 209 FWFMGFVSYIDAFNCLNKAL 224

The following BLAST results are available for this feature:

BLAST of CmaCh05G005260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SE96	1.6e-86	59.35	GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1	[more]
Q8S8F8	8.2e-75	58.87	GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1	[more]
Q9M063	2.3e-61	57.87	Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV...	[more]
Q9M122	2.3e-40	43.50	GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1	[more]
Q9LYV6	9.5e-39	37.64	GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1	[more]

BLAST of CmaCh05G005260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28200.1	1.1e-87	59.35	FH interacting protein 1	[more]
AT2G22475.1	5.8e-76	58.87	GRAM domain family protein	[more]
AT4G40100.1	1.6e-54	52.78	GRAM domain family protein	[more]
AT2G22475.2	4.5e-52	54.82	GRAM domain family protein	[more]
AT4G01600.1	1.6e-41	43.50	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 178..255 e-value: 4.1E-19 score: 79.5
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 179..295 e-value: 1.1E-24 score: 86.5
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 176..295 e-value: 5.9E-20 score: 73.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..25
None	No IPR available	PANTHER	PTHR31969:SF4	GEM-LIKE PROTEIN 1	coord: 30..297
None	No IPR available	CDD	cd13222	PH-GRAM_GEM	coord: 189..295 e-value: 1.39935E-60 score: 186.394
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 30..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G005260.1	CmaCh05G005260.1	mRNA