CmaCh05G005230 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGCAAGAGTAGAATTCAAAGAAAACCTAGAATTTTGTGCCTTCATGGCTTCCGAACCAGTGGAGCAATCTTGAAGAAGCATGTCGAGAAATGGCCGACTTCCGTCCTCAATCAATTCGATTTCCATTTTATGGACGCTCCATTCCCTTCCAGAGGAAAATCCGAAGTCGAAGGACTTCACGATCCTCCCTATTACGAGTGGTTTCAATTCCACGAGGTTCACAAATCGCTCTTCCTTTTCAATTCTCTGCAATTTCACAACTCAAAATCGATCGATTCAATTTCAGGACACGGCCGATTTTACAAATGTTGAGGAATGCCTTCAATTCATCGAGAATCACATGCTTGAGCACGGACCATTCGACGGACTACTCGGCTTCTCACAGGTAACAATTGATCCGAATCAATTTCTGAGTTGAACGATCTCACATTTGAAACTCTTCGATCGCGAACATTTTCAGGGAGCGGCGTTGGCGGCCCTACTACCGGGATTTCAAGCGAAGGTAAACACTCCGGCCGCTTGGCCTGGCTATTGTTGTAAATCTCTGTTTCAATTTTCCAGAATGAAATTGAATCGGTTGCAGCAGGGTGTGGCGCTGACGAGAGTCCCTAAGATCAAATTCGTAATCATCATCAACGGTGTGAAACTGGAATCGCCATCTCTGGACGCTCAAGAAGCTTATGCCTCATCCATCGCATGCCCATCCCTCCATTTTCTAAGTAACTTCCACGCATTGTTTTTGCCTTATTCCATTTCTTTTCATTTTGCTTGCTGAAAGGATCTGTTGTTATTGTGGTTGACAAGGTGAGGAAGACTTCTTCATGCCCAGTGGATTGCAGCTGCTGGAATCATTTGTTGAACCATTTGTAATCAATCATCTCAAAGGCCACGCAGTACCTAGACTTGGTAATCTTCAATTCATTCCTCAAATATACATCCTTATGGCTCTTCTTATGGTAATTTTGATATTGTATAATTTCCTTTTTCAGATCAAAAAAGTTTGAAGATTATGGAGAATTTCATCGACAGGATTTCAAAGTTATGATCCACTCAAACTAAATAACAGCTTAGCTCAAAGACAAATGAGATGCTAGAATACATCTTAATTAGATGTGTTATACTCCCCGATAATAATAATAAAAATAAAACGAAG ATGGGCAGCAAGAGTAGAATTCAAAGAAAACCTAGAATTTTGTGCCTTCATGGCTTCCGAACCAGTGGAGCAATCTTGAAGAAGCATGTCGAGAAATGGCCGACTTCCGTCCTCAATCAATTCGATTTCCATTTTATGGACGCTCCATTCCCTTCCAGAGGAAAATCCGAAGTCGAAGGACTTCACGATCCTCCCTATTACGAGTGGTTTCAATTCCACGAGGACACGGCCGATTTTACAAATGTTGAGGAATGCCTTCAATTCATCGAGAATCACATGCTTGAGCACGGACCATTCGACGGACTACTCGGCTTCTCACAGGGAGCGGCGTTGGCGGCCCTACTACCGGGATTTCAAGCGAAGGGTGTGGCGCTGACGAGAGTCCCTAAGATCAAATTCGTAATCATCATCAACGGTGTGAAACTGGAATCGCCATCTCTGGACGCTCAAGAAGCTTATGCCTCATCCATCGCATGCCCATCCCTCCATTTTCTAAGTGAGGAAGACTTCTTCATGCCCAGTGGATTGCAGCTGCTGGAATCATTTGTTGAACCATTTGTAATCAATCATCTCAAAGGCCACGCAGTACCTAGACTTGATCAAAAAAGTTTGAAGATTATGGAGAATTTCATCGACAGGATTTCAAAGTTATGATCCACTCAAACTAAATAACAGCTTAGCTCAAAGACAAATGAGATGCTAGAATACATCTTAATTAGATGTGTTATACTCCCCGATAATAATAATAAAAATAAAACGAAG ATGGGCAGCAAGAGTAGAATTCAAAGAAAACCTAGAATTTTGTGCCTTCATGGCTTCCGAACCAGTGGAGCAATCTTGAAGAAGCATGTCGAGAAATGGCCGACTTCCGTCCTCAATCAATTCGATTTCCATTTTATGGACGCTCCATTCCCTTCCAGAGGAAAATCCGAAGTCGAAGGACTTCACGATCCTCCCTATTACGAGTGGTTTCAATTCCACGAGGACACGGCCGATTTTACAAATGTTGAGGAATGCCTTCAATTCATCGAGAATCACATGCTTGAGCACGGACCATTCGACGGACTACTCGGCTTCTCACAGGGAGCGGCGTTGGCGGCCCTACTACCGGGATTTCAAGCGAAGGGTGTGGCGCTGACGAGAGTCCCTAAGATCAAATTCGTAATCATCATCAACGGTGTGAAACTGGAATCGCCATCTCTGGACGCTCAAGAAGCTTATGCCTCATCCATCGCATGCCCATCCCTCCATTTTCTAAGTGAGGAAGACTTCTTCATGCCCAGTGGATTGCAGCTGCTGGAATCATTTGTTGAACCATTTGTAATCAATCATCTCAAAGGCCACGCAGTACCTAGACTTGATCAAAAAAGTTTGAAGATTATGGAGAATTTCATCGACAGGATTTCAAAGTTATGA MGSKSRIQRKPRILCLHGFRTSGAILKKHVEKWPTSVLNQFDFHFMDAPFPSRGKSEVEGLHDPPYYEWFQFHEDTADFTNVEECLQFIENHMLEHGPFDGLLGFSQGAALAALLPGFQAKGVALTRVPKIKFVIIINGVKLESPSLDAQEAYASSIACPSLHFLSEEDFFMPSGLQLLESFVEPFVINHLKGHAVPRLDQKSLKIMENFIDRISKL Homology
BLAST of CmaCh05G005230 vs. ExPASy Swiss-Prot
Match: P36591 (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 7.3e-17 Identity = 57/204 (27.94%), Postives = 90/204 (44.12%), Query Frame = 0
BLAST of CmaCh05G005230 vs. ExPASy Swiss-Prot
Match: Q9VDL1 (Esterase CG5412 OS=Drosophila melanogaster OX=7227 GN=CG5412 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16 Identity = 67/225 (29.78%), Postives = 101/225 (44.89%), Query Frame = 0
BLAST of CmaCh05G005230 vs. ExPASy Swiss-Prot
Match: Q7QBJ0 (Esterase AGAP003155 OS=Anopheles gambiae OX=7165 GN=AGAP003155 PE=3 SV=3) HSP 1 Score: 85.9 bits (211), Expect = 6.2e-16 Identity = 67/216 (31.02%), Postives = 101/216 (46.76%), Query Frame = 0
BLAST of CmaCh05G005230 vs. ExPASy Swiss-Prot
Match: Q29BR3 (Esterase GA18864 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA18864 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.0e-15 Identity = 65/224 (29.02%), Postives = 96/224 (42.86%), Query Frame = 0
BLAST of CmaCh05G005230 vs. ExPASy Swiss-Prot
Match: Q3SZ07 (Esterase OVCA2 OS=Bos taurus OX=9913 GN=OVCA2 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13 Identity = 64/223 (28.70%), Postives = 95/223 (42.60%), Query Frame = 0
BLAST of CmaCh05G005230 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 272.3 bits (695), Expect = 3.3e-73 Identity = 129/218 (59.17%), Postives = 167/218 (76.61%), Query Frame = 0
BLAST of CmaCh05G005230 vs. TAIR 10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 238.8 bits (608), Expect = 4.1e-63 Identity = 112/215 (52.09%), Postives = 152/215 (70.70%), Query Frame = 0
BLAST of CmaCh05G005230 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-56 Identity = 102/166 (61.45%), Postives = 132/166 (79.52%), Query Frame = 0
BLAST of CmaCh05G005230 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11 Identity = 57/187 (30.48%), Postives = 82/187 (43.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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