CmaCh05G005160 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTCTCCACCCCTCCGCCGCTGCCATGTCCTCACCGGCTTCCTTATCCATTCCATTCTCCTCTCCCACATCTCTCTCGCCGCCGCCCAATCTGGAGGACCCGCTGTTCCCAGTCCGCCGGAGATGTACTCTTTCAAACAGACAATCAGCAAACGAATGGCCGTCGTTTTGATTGTTCTCGTTTGCTTCTTTATCGTTCTTGCCCTCCTCTCCGTTTACACCCGCCAGTGCAACGATCAACGTTTTGGCGGCCACCTTCTCCTCCCCACAGCCGCAGAAGGAATCAACGGCCGACCAAGAAGGGCGGCGCGTGGTCTCGATGCGGCTGTTATAGCTTCTTTCCCAACATTCGTGTATTCCAACGTAAAGGGTCTCAAAATTGGGAAAGGCGCATTGGAATGCGCCGTTTGTTTATCCGAATTCGAAGATGATAATACGCTGCGTTTGTTGCCGAAATGTAGCCATGTCTTCCACTCCGATTGCATCGACGCTTGGTTGGTGTCTCACTCTACCTGCCCTGTTTGCCGCGCCAGTCTCGTCCCCAAACCCGGCGACATCTCCTTTGCTGCTCTGCTCGATTCCGATTCAAGAATCCACGGCGATGACGGAAATCGAGTGGCCGGATTGGAAAATTGTCAAGTGGGTATACGAATTCCAGAGGGGAATCCCCAAAATCAGGGATTGAATCAGAACGGTCCAATTAGGTCGCGATCGACGGGATGGAGATTGATCGGACTGTTCCCTCGATCCCACTCGACGGGACACTCGCTGGTTCAAATAGGGGCGGATTACGAAAGGTTTACTCTGAGATTGCCGACGGAGGTGAGAAGTGAGCTGTTGAATTCGAATTTGAATCGGGCGAGGAGCTGCGTGGCGTTGCCGAGGGTGCAGAGTTCGAGACAGGGGTATCGTAGTGAATTGGGGAAAAATGGGTTTGTGGGCAATCGAAGCCGCAGTGGGCGTTCGGAGTGGTGGACATTTTTCCCGGCGACGCCGTTGTTCAGAAGGGAGGGTTCTAGAAATGATGCAAATGTGAATGTGAATGGAGACGGCGGTGGACGGCCGTTTGTACGATTGCGAGATGATGGACATGGTCAAAGTCAACAATAACGTTGACGGTGTTGGCTTCTGGACATTTGGGCCGATGTGGGCTTTTGTGTGATTTTCTTAAATTTAATTTTATAAAGAAAAAGAAAATTCGAATTTCTACGGGAAGAAGGGTAAACGGTCAAAAGTGATTAGTTGTGGCGCGTGGGACACACGCGTGTATAGAAAGTGTTGATATTTTGTTAATAAATTAGGAAAAAGTATTTACATATGTAAAATTAAGTGGTTATTTGTTGAAAATTATTCATAATTTTTTTTAATTATTTGAAAATTATTTGTTTTCATTTTAATAGAAATTATAGCGGAAGTAAAATTAGCACCGTAACAACCCAAGATCACTACCGACAGATATTGTCTTTTTTGAGCTTTTTCTTTCGAGCTTCTCCTTAAGGCACCAGACAATATGCCAGTGGAGACGTTGTGCCTTGAATGGAGGTGGATTATGAGATTTCACATCAATTGGAGAGGGGAACGACTGTCAGCAAAGACATTAGGCTTTGAAGGGGGGTGAATTGTGAGATCTCACCTTGTTAAGAATGAGAATTATAATTGGGATCGAAGGTGTGTGATCTTCATTGATATTCATAACGTTTAAATAAGATACAAGCTACCAACAATGGTCAAATAAACAAAAAAAAAATGATTATAAATAACGATATTATGCTCTATAAAACACGATTTCGATGGTAGGATAAGAAAAGAATAGACAATTGGTATAATTTGGAATTAGAATGTCTCTGAAAAAAGAATGTGATTATATTTATATATTTAATATTATTTGTGGCGCCGACAAACTGACCAAAAATTATGGAAATTACCTATAAACTTCCGAATTTAGAAGAATGAAACATCCAAGAAAAGAATTTAAAAAAGAAAAAAAATACAACATTGGTTACCGTGTGACAATAATTCATCAATGTGAATCATTATTTTAACGTTTTGCTTTCCAAATATATAAAATTAAAAAAAAGAAAAGAAAAAAAAAAAGAGTCAAAGTTGGATCCTTTTATTTGATCGCCTTCCGTTTCTCAGTTGTTATTGATCGATCGTATGAACAATATGCAATGGCCATAGATCAGACCAAGAAGCTCAAGAATCTCATCGACGCTTTCAAAGATCAGGCCTCAATAATCAAAGCCACTTTCTCAATTCATCGCCGTTCATCTTCCATTAAAGTCGCCGTCGTCCGTGCCACCACGCACGGCGCCAGAAACCCACCTTCCGACGCCCGACTCGCTGCTCTGTTAGCCCTTGGAAATGACTTCCGTTCCTCCACGGCATTTGTCTGCATCCAAGCCTTGATGGAACGGCTTCATACAACCACGAGCGCCGCCGTGGCCATGAAATCGCTTTTCACTCTGCATATAATTGTAATTCGAGGTCCGTTTAATCTGAGGGATGAGGTGGCGTTTTCCCCTTATTACGGAGGGCGAAATTTTCTAAATTTGTCCGCGTTTCGCGACGTATCGGACTCGGAGATGAGCGAGTTGTCGTGTTGGGTGAGATGGTATGCAGGGGTTGTGGAACATATCAGGAAATTGGATTGGATTCTGTATTTTCGTTCAAGAAATCCCGAAATTGTGGAAGGTAAAGACAGGAAGATTCCCGAATTGTTGGAGGAATTGGATGTTCTTTTGGGTTTTTTAGAGCGGATTTCGGAAGTTCCCGAGTCGTTGCATGTCCAGAAATCGGATTTGGTTTACGAGGTTGTGAGATTGGTTCTGGAGAGTTACCGGTTGGTGCAGAGGGAGATTCGGGTCCGAGTTAACGAAATCGGAAACAGAGTCGAGTGGCTGAGTCGGGACGAGTTAACCGAGTCGGTGGAGATTCTGACTCGGATGGAAAATTGCAGAAGGAAAGTGAGTGTGTTGTTTGTGAACAGAGGGAAGAACGATGAGTTGTGGGAACTGGTGACGTGTACGAAAGGGAAACTGGTGGAGCGGAGGAGGAGGATGACGACAATGACCGAGTCGACTCGGTTGTGGAACCCGTTTGTTGAACCGGGTTCATTGAGACCGTTGGGCCCGGCTTTGCTTCCACTGACCGTTTCAACGGTAGGATAG ATGACCTCTCCACCCCTCCGCCGCTGCCATGTCCTCACCGGCTTCCTTATCCATTCCATTCTCCTCTCCCACATCTCTCTCGCCGCCGCCCAATCTGGAGGACCCGCTGTTCCCAGTCCGCCGGAGATGTACTCTTTCAAACAGACAATCAGCAAACGAATGGCCGTCGTTTTGATTGTTCTCGTTTGCTTCTTTATCGTTCTTGCCCTCCTCTCCGTTTACACCCGCCAGTGCAACGATCAACGTTTTGGCGGCCACCTTCTCCTCCCCACAGCCGCAGAAGGAATCAACGGCCGACCAAGAAGGGCGGCGCGTGGTCTCGATGCGGCTGTTATAGCTTCTTTCCCAACATTCGTGTATTCCAACGTAAAGGGTCTCAAAATTGGGAAAGGCGCATTGGAATGCGCCGTTTGTTTATCCGAATTCGAAGATGATAATACGCTGCGTTTGTTGCCGAAATGTAGCCATGTCTTCCACTCCGATTGCATCGACGCTTGGTTGGTGTCTCACTCTACCTGCCCTGTTTGCCGCGCCAGTCTCGTCCCCAAACCCGGCGACATCTCCTTTGCTGCTCTGCTCGATTCCGATTCAAGAATCCACGGCGATGACGGAAATCGAGTGGCCGGATTGGAAAATTGTCAAGTGGGTATACGAATTCCAGAGGGGAATCCCCAAAATCAGGGATTGAATCAGAACGGTCCAATTAGGTCGCGATCGACGGGATGGAGATTGATCGGACTGTTCCCTCGATCCCACTCGACGGGACACTCGCTGGTTCAAATAGGGGCGGATTACGAAAGGTTTACTCTGAGATTGCCGACGGAGGTGAGAAGTGAGCTGTTGAATTCGAATTTGAATCGGGCGAGGAGCTGCGTGGCGTTGCCGAGGGTGCAGAGTTCGAGACAGGGGTATCGTAGTGAATTGGGGAAAAATGGGTTTGTGGGCAATCGAAGCCGCAGTGGGCGTTCGGAGTGGTGGACATTTTTCCCGGCGACGCCGTTGTTCAGAAGGGAGGGTTCTAGAAATGATGCAAATGTGAATGTGAATGGAGACGGCGGTGGACGGCCGTTTGTACGATTGCGAGATGATGGACATGTTGTTATTGATCGATCGTATGAACAATATGCAATGGCCATAGATCAGACCAAGAAGCTCAAGAATCTCATCGACGCTTTCAAAGATCAGGCCTCAATAATCAAAGCCACTTTCTCAATTCATCGCCGTTCATCTTCCATTAAAGTCGCCGTCGTCCGTGCCACCACGCACGGCGCCAGAAACCCACCTTCCGACGCCCGACTCGCTGCTCTGTTAGCCCTTGGAAATGACTTCCGTTCCTCCACGGCATTTGTCTGCATCCAAGCCTTGATGGAACGGCTTCATACAACCACGAGCGCCGCCGTGGCCATGAAATCGCTTTTCACTCTGCATATAATTGTAATTCGAGGTCCGTTTAATCTGAGGGATGAGGTGGCGTTTTCCCCTTATTACGGAGGGCGAAATTTTCTAAATTTGTCCGCGTTTCGCGACGTATCGGACTCGGAGATGAGCGAGTTGTCGTGTTGGGTGAGATGGTATGCAGGGGTTGTGGAACATATCAGGAAATTGGATTGGATTCTGTATTTTCGTTCAAGAAATCCCGAAATTGTGGAAGGTAAAGACAGGAAGATTCCCGAATTGTTGGAGGAATTGGATGTTCTTTTGGGTTTTTTAGAGCGGATTTCGGAAGTTCCCGAGTCGTTGCATGTCCAGAAATCGGATTTGGTTTACGAGGTTGTGAGATTGGTTCTGGAGAGTTACCGGTTGGTGCAGAGGGAGATTCGGGTCCGAGTTAACGAAATCGGAAACAGAGTCGAGTGGCTGAGTCGGGACGAGTTAACCGAGTCGGTGGAGATTCTGACTCGGATGGAAAATTGCAGAAGGAAAGTGAGTGTGTTGTTTGTGAACAGAGGGAAGAACGATGAGTTGTGGGAACTGGTGACGTGTACGAAAGGGAAACTGGTGGAGCGGAGGAGGAGGATGACGACAATGACCGAGTCGACTCGGTTGTGGAACCCGTTTGTTGAACCGGGTTCATTGAGACCGTTGGGCCCGGCTTTGCTTCCACTGACCGTTTCAACGGTAGGATAG ATGACCTCTCCACCCCTCCGCCGCTGCCATGTCCTCACCGGCTTCCTTATCCATTCCATTCTCCTCTCCCACATCTCTCTCGCCGCCGCCCAATCTGGAGGACCCGCTGTTCCCAGTCCGCCGGAGATGTACTCTTTCAAACAGACAATCAGCAAACGAATGGCCGTCGTTTTGATTGTTCTCGTTTGCTTCTTTATCGTTCTTGCCCTCCTCTCCGTTTACACCCGCCAGTGCAACGATCAACGTTTTGGCGGCCACCTTCTCCTCCCCACAGCCGCAGAAGGAATCAACGGCCGACCAAGAAGGGCGGCGCGTGGTCTCGATGCGGCTGTTATAGCTTCTTTCCCAACATTCGTGTATTCCAACGTAAAGGGTCTCAAAATTGGGAAAGGCGCATTGGAATGCGCCGTTTGTTTATCCGAATTCGAAGATGATAATACGCTGCGTTTGTTGCCGAAATGTAGCCATGTCTTCCACTCCGATTGCATCGACGCTTGGTTGGTGTCTCACTCTACCTGCCCTGTTTGCCGCGCCAGTCTCGTCCCCAAACCCGGCGACATCTCCTTTGCTGCTCTGCTCGATTCCGATTCAAGAATCCACGGCGATGACGGAAATCGAGTGGCCGGATTGGAAAATTGTCAAGTGGGTATACGAATTCCAGAGGGGAATCCCCAAAATCAGGGATTGAATCAGAACGGTCCAATTAGGTCGCGATCGACGGGATGGAGATTGATCGGACTGTTCCCTCGATCCCACTCGACGGGACACTCGCTGGTTCAAATAGGGGCGGATTACGAAAGGTTTACTCTGAGATTGCCGACGGAGGTGAGAAGTGAGCTGTTGAATTCGAATTTGAATCGGGCGAGGAGCTGCGTGGCGTTGCCGAGGGTGCAGAGTTCGAGACAGGGGTATCGTAGTGAATTGGGGAAAAATGGGTTTGTGGGCAATCGAAGCCGCAGTGGGCGTTCGGAGTGGTGGACATTTTTCCCGGCGACGCCGTTGTTCAGAAGGGAGGGTTCTAGAAATGATGCAAATGTGAATGTGAATGGAGACGGCGGTGGACGGCCGTTTGTACGATTGCGAGATGATGGACATGTTGTTATTGATCGATCGTATGAACAATATGCAATGGCCATAGATCAGACCAAGAAGCTCAAGAATCTCATCGACGCTTTCAAAGATCAGGCCTCAATAATCAAAGCCACTTTCTCAATTCATCGCCGTTCATCTTCCATTAAAGTCGCCGTCGTCCGTGCCACCACGCACGGCGCCAGAAACCCACCTTCCGACGCCCGACTCGCTGCTCTGTTAGCCCTTGGAAATGACTTCCGTTCCTCCACGGCATTTGTCTGCATCCAAGCCTTGATGGAACGGCTTCATACAACCACGAGCGCCGCCGTGGCCATGAAATCGCTTTTCACTCTGCATATAATTGTAATTCGAGGTCCGTTTAATCTGAGGGATGAGGTGGCGTTTTCCCCTTATTACGGAGGGCGAAATTTTCTAAATTTGTCCGCGTTTCGCGACGTATCGGACTCGGAGATGAGCGAGTTGTCGTGTTGGGTGAGATGGTATGCAGGGGTTGTGGAACATATCAGGAAATTGGATTGGATTCTGTATTTTCGTTCAAGAAATCCCGAAATTGTGGAAGGTAAAGACAGGAAGATTCCCGAATTGTTGGAGGAATTGGATGTTCTTTTGGGTTTTTTAGAGCGGATTTCGGAAGTTCCCGAGTCGTTGCATGTCCAGAAATCGGATTTGGTTTACGAGGTTGTGAGATTGGTTCTGGAGAGTTACCGGTTGGTGCAGAGGGAGATTCGGGTCCGAGTTAACGAAATCGGAAACAGAGTCGAGTGGCTGAGTCGGGACGAGTTAACCGAGTCGGTGGAGATTCTGACTCGGATGGAAAATTGCAGAAGGAAAGTGAGTGTGTTGTTTGTGAACAGAGGGAAGAACGATGAGTTGTGGGAACTGGTGACGTGTACGAAAGGGAAACTGGTGGAGCGGAGGAGGAGGATGACGACAATGACCGAGTCGACTCGGTTGTGGAACCCGTTTGTTGAACCGGGTTCATTGAGACCGTTGGGCCCGGCTTTGCTTCCACTGACCGTTTCAACGGTAGGATAG MTSPPLRRCHVLTGFLIHSILLSHISLAAAQSGGPAVPSPPEMYSFKQTISKRMAVVLIVLVCFFIVLALLSVYTRQCNDQRFGGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYSNVKGLKIGKGALECAVCLSEFEDDNTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGDISFAALLDSDSRIHGDDGNRVAGLENCQVGIRIPEGNPQNQGLNQNGPIRSRSTGWRLIGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVALPRVQSSRQGYRSELGKNGFVGNRSRSGRSEWWTFFPATPLFRREGSRNDANVNVNGDGGGRPFVRLRDDGHVVIDRSYEQYAMAIDQTKKLKNLIDAFKDQASIIKATFSIHRRSSSIKVAVVRATTHGARNPPSDARLAALLALGNDFRSSTAFVCIQALMERLHTTTSAAVAMKSLFTLHIIVIRGPFNLRDEVAFSPYYGGRNFLNLSAFRDVSDSEMSELSCWVRWYAGVVEHIRKLDWILYFRSRNPEIVEGKDRKIPELLEELDVLLGFLERISEVPESLHVQKSDLVYEVVRLVLESYRLVQREIRVRVNEIGNRVEWLSRDELTESVEILTRMENCRRKVSVLFVNRGKNDELWELVTCTKGKLVERRRRMTTMTESTRLWNPFVEPGSLRPLGPALLPLTVSTVG Homology
BLAST of CmaCh05G005160 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2) HSP 1 Score: 211.5 bits (537), Expect = 3.2e-53 Identity = 136/310 (43.87%), Postives = 184/310 (59.35%), Query Frame = 0
BLAST of CmaCh05G005160 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 5.6e-50 Identity = 142/373 (38.07%), Postives = 199/373 (53.35%), Query Frame = 0
BLAST of CmaCh05G005160 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2) HSP 1 Score: 196.8 bits (499), Expect = 8.1e-49 Identity = 138/349 (39.54%), Postives = 186/349 (53.30%), Query Frame = 0
BLAST of CmaCh05G005160 vs. ExPASy Swiss-Prot
Match: Q9M0R5 (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 1.4e-48 Identity = 142/339 (41.89%), Postives = 184/339 (54.28%), Query Frame = 0
BLAST of CmaCh05G005160 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 2.4e-48 Identity = 132/321 (41.12%), Postives = 171/321 (53.27%), Query Frame = 0
BLAST of CmaCh05G005160 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein ) HSP 1 Score: 211.5 bits (537), Expect = 2.3e-54 Identity = 136/310 (43.87%), Postives = 184/310 (59.35%), Query Frame = 0
BLAST of CmaCh05G005160 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein ) HSP 1 Score: 200.7 bits (509), Expect = 4.0e-51 Identity = 142/373 (38.07%), Postives = 199/373 (53.35%), Query Frame = 0
BLAST of CmaCh05G005160 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein ) HSP 1 Score: 196.8 bits (499), Expect = 5.8e-50 Identity = 138/349 (39.54%), Postives = 186/349 (53.30%), Query Frame = 0
BLAST of CmaCh05G005160 vs. TAIR 10
Match: AT4G09120.1 (RING/U-box superfamily protein ) HSP 1 Score: 196.1 bits (497), Expect = 9.8e-50 Identity = 142/339 (41.89%), Postives = 184/339 (54.28%), Query Frame = 0
BLAST of CmaCh05G005160 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein ) HSP 1 Score: 195.3 bits (495), Expect = 1.7e-49 Identity = 132/321 (41.12%), Postives = 171/321 (53.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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