CmaCh05G004850 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGTCCAATTCCATACGTTTCAGTATATCATTGGAGGAAAATAGTTTATTATATAGGATCATTCACAGGTTAAAAGAACCCTACACGGCATAATTTCTTACACCGCAATTCCAGGCTTTCCCTCGCAGCATCTGATTAGAGGTTTTCACTTTACTCTTTATTATTCAAACCCTTACTTCTCATTTTCCCTTCATCAGTTCTTTCTTCTTCCATTTCCATTTTTCTTCCAATCGAAGAACGAAAATCCATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTATCTGCTCTCTTTCCTCGCTTTTAGCCTACTAGTTGAGAATTGTGGATGTGTTTGTTCTTATGTGCCTCGTGTTCTTGCTAGATCTGTGATGTAGTTAAGAGATTATGTTGATTTGTGGCTTGCTTGCTAGTTTAATGGTGGATCTGGTGCTTGAATCTTGAATGCTGCCTGATGGTATGTGGAGTGAGTTAGGGTTTAATTATAGGGATTATTTTAGTCCAAATTCGCGGTTTGGGTATGATTATTTTTTAATTGAAGCTTAATCTTGGGCTTAGTAATTAGATCTATGTTTGTTAGGTAAGAAGACTTATTTATTTTATATTTCTTTCTATGTCGTGCGTAACTTTTTATATTTAAGCAATGATTTTTCAAATCTGCCCGCTTACATTAGAATTTTTGTATTGATCCTGTATTTAGAACACTTCTCAGAAACTTTTACATACTATGTGTCCGAAATAACATCAACTGCTCGTAATTCTTTTTGCATCCATTGTCTGTGTTAAGAATATGAATAGGATAGAAGATTAAATGTAACAAACTAGCAGTTTAAGGCTTAAGCTTTTAGGTCATGTAGTAATTTAAATTTAAAATGGTTGTGGAGTAAAAGGTCGTGGGTAGGGGTGTACATTCAACCCAATAACCTGGACCAACCCAACCCGAATTATAAGGGTTGGGTTGGATTAGCATTTCAGGTAGGGTTGGGTTCATTTTTCTGAACCCGAACTGAATCGGTTCGGTTTCGGGTTCGTGGATAATTATACATCGATTTGTGTTTATTTGTGAATTTTTAATATATTTTATCTAAGATTGTATTTGAATAATTATAAATTGTGGATAAATAAAACTAAAAAAATCCGATAACACGACAACCCAACCTGAAGGTTGGGTTGGGTTGAGTTGTGAAAATTTTCGGGCTGGGTTGGGTTATCAATCCAACCAATCTGAACTTTTGGGTTGGGTCAAAAAAATCCTTCAACCCAACCCGAACCATGTACATCCCTACTCATGGGTCATTTGTCATGGGCTAATTTTCAAGCCCTTAAAAAGGATGAGAGTGAGGTGGTTGGTATATCAACTTGCTTCCAGATTCATTTTAGTATGTGCAATCGGTTGATTCAAACCTCTAATATCTTTGTCGACCATAAGTGTCTTAACTAGTTTTGTTTGTTAAATCATTACCTGGTTGGTAGATATAATCTTTTGTTATATCCCTAACCCTTCTCTTGATTGGAGTCAGGATATGAATTTAATATACAAAGGCCCACATGCAGGTTATTATACAAAGGCCCACGTGTCTTAACTTAGTGCTTAACATGTGATAATTGTCTAGGTGTGGGTAGTTCACGGATAAAGCCTTTTCACCAATTGTTCAATTTCCTTGTAGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAGAACGGGTTTTAATCCTACAATCGCTTAGTTGTATTTCTTGAGGTATATTTGCCCTGTTCTGTTCATGCTAGTGTTGCCCCACATACTCTTTTATCTGGACATTGAATGGTGTTTGTTATTGCATTCTTAAAGATGATTAATATGTTTTGTTCATTCACTTCATTACTATCATCACCAGGATGATGCCATCAACACACCCTTATTTATAAATACAAACTAGTGAAAATAGCCTTAATGACTTCTAATTTCTAACTGAAATAGGCTACCTGTTGTTATGCCGTAACTTAATTACTTTGTTGTGCAATAATTTTCTCCGGATTATGAATTAGATCTAATAATCCCTGACTTTCTAATTTGAATCTCTATGATTTGATCTCCCATATTTGTTGAAGCAAGCCATGAAGTTCAAGCACTGCACTGGTTAAGCCGAACATGGGTTTTAAAAATCTCGAGGGAAAACTTGAAATGAAAAGTCTAAATAAGACAATATCTGCTAGCGGTGAGCCTGAGCTATTACAAATGGTATCAGAGCTAAACACCGGACGATGTACTAGCAAGGAGGCTGTTATCTAAAGGGGTAGACAGAGGCGGTGTGTCAATAAGGATGTCAGGCTTTCAAAGGGGGTGGATTTGGTGAAGGTCCCACATAGATTGAAGAAAGGAATTAGTGCGAGCTAGGACACTAGGCCTTGAACGGGATGGATTGTGAGATCACACATTGGTTGAAAAGGAGAACGAAAAACTTTTTATAAAAGTGTAGAAACCTCTCTTTAGGAGAGGTGTTTTAAAATCTAGACGGAAACCAAAGAGAAAATATTTGCTAGCAATAAGTCAAAAACCTTGTATTTAATTAGTAAGGGGTGAATTTCCAAATTTCCAACCATTCACACTTAGGATTATGAAATAAAAGAATCAACCAACTTTTAATATTTTGGCTTTAATCTTTAATAAGAAAAAGAAAAAGTTTAAAAAAAATGGTTAATATATTCGAGATAACCAC GTGTCCAATTCCATACGTTTCAGTATATCATTGGAGGAAAATAGTTTATTATATAGGATCATTCACAGGTTAAAAGAACCCTACACGGCATAATTTCTTACACCGCAATTCCAGGCTTTCCCTCGCAGCATCTGATTAGAGGTTTTCACTTTACTCTTTATTATTCAAACCCTTACTTCTCATTTTCCCTTCATCAGTTCTTTCTTCTTCCATTTCCATTTTTCTTCCAATCGAAGAACGAAAATCCATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAGAACGGGTTTTAATCCTACAATCGCTTAGTTGTATTTCTTGAGGTATATTTGCCCTGTTCTGTTCATGCTAGTGTTGCCCCACATACTCTTTTATCTGGACATTGAATGGTGTTTGTTATTGCATTCTTAAAGATGATTAATATGTTTTGTTCATTCACTTCATTACTATCATCACCAGGATGATGCCATCAACACACCCTTATTTATAAATACAAACTAGTGAAAATAGCCTTAATGACTTCTAATTTCTAACTGAAATAGGCTACCTGTTGTTATGCCGTAACTTAATTACTTTGTTGTGCAATAATTTTCTCCGGATTATGAATTAGATCTAATAATCCCTGACTTTCTAATTTGAATCTCTATGATTTGATCTCCCATATTTGTTGAAGCAAGCCATGAAGTTCAAGCACTGCACTGGTTAAGCCGAACATGGGTTTTAAAAATCTCGAGGGAAAACTTGAAATGAAAAGTCTAAATAAGACAATATCTGCTAGCGGTGAGCCTGAGCTATTACAAATGGTATCAGAGCTAAACACCGGACGATGTACTAGCAAGGAGGCTGTTATCTAAAGGGGTAGACAGAGGCGGTGTGTCAATAAGGATGTCAGGCTTTCAAAGGGGGTGGATTTGGTGAAGGTCCCACATAGATTGAAGAAAGGAATTAGTGCGAGCTAGGACACTAGGCCTTGAACGGGATGGATTGTGAGATCACACATTGGTTGAAAAGGAGAACGAAAAACTTTTTATAAAAGTGTAGAAACCTCTCTTTAGGAGAGGTGTTTTAAAATCTAGACGGAAACCAAAGAGAAAATATTTGCTAGCAATAAGTCAAAAACCTTGTATTTAATTAGTAAGGGGTGAATTTCCAAATTTCCAACCATTCACACTTAGGATTATGAAATAAAAGAATCAACCAACTTTTAATATTTTGGCTTTAATCTTTAATAAGAAAAAGAAAAAGTTTAAAAAAAATGGTTAATATATTCGAGATAACCAC ATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAG MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED Homology
BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q9LX15 (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 6.1e-29 Identity = 71/151 (47.02%), Postives = 87/151 (57.62%), Query Frame = 0
BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: P33050 (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26 Identity = 59/155 (38.06%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q8H6L7 (Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-25 Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 0
BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q7M1X5 (Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q8LGR0 (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0
BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 201.1 bits (510), Expect = 6.9e-52 Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = 0
BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT1G78040.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31 Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 0
BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT1G78040.2 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31 Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 0
BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT5G10130.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 128.6 bits (322), Expect = 4.3e-30 Identity = 71/151 (47.02%), Postives = 87/151 (57.62%), Query Frame = 0
BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22 Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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