CmaCh05G004850 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G004850
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPollen-specific protein
LocationCma_Chr05: 2282997 .. 2286110 (+)
RNA-Seq ExpressionCmaCh05G004850
SyntenyCmaCh05G004850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTCCAATTCCATACGTTTCAGTATATCATTGGAGGAAAATAGTTTATTATATAGGATCATTCACAGGTTAAAAGAACCCTACACGGCATAATTTCTTACACCGCAATTCCAGGCTTTCCCTCGCAGCATCTGATTAGAGGTTTTCACTTTACTCTTTATTATTCAAACCCTTACTTCTCATTTTCCCTTCATCAGTTCTTTCTTCTTCCATTTCCATTTTTCTTCCAATCGAAGAACGAAAATCCATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTATCTGCTCTCTTTCCTCGCTTTTAGCCTACTAGTTGAGAATTGTGGATGTGTTTGTTCTTATGTGCCTCGTGTTCTTGCTAGATCTGTGATGTAGTTAAGAGATTATGTTGATTTGTGGCTTGCTTGCTAGTTTAATGGTGGATCTGGTGCTTGAATCTTGAATGCTGCCTGATGGTATGTGGAGTGAGTTAGGGTTTAATTATAGGGATTATTTTAGTCCAAATTCGCGGTTTGGGTATGATTATTTTTTAATTGAAGCTTAATCTTGGGCTTAGTAATTAGATCTATGTTTGTTAGGTAAGAAGACTTATTTATTTTATATTTCTTTCTATGTCGTGCGTAACTTTTTATATTTAAGCAATGATTTTTCAAATCTGCCCGCTTACATTAGAATTTTTGTATTGATCCTGTATTTAGAACACTTCTCAGAAACTTTTACATACTATGTGTCCGAAATAACATCAACTGCTCGTAATTCTTTTTGCATCCATTGTCTGTGTTAAGAATATGAATAGGATAGAAGATTAAATGTAACAAACTAGCAGTTTAAGGCTTAAGCTTTTAGGTCATGTAGTAATTTAAATTTAAAATGGTTGTGGAGTAAAAGGTCGTGGGTAGGGGTGTACATTCAACCCAATAACCTGGACCAACCCAACCCGAATTATAAGGGTTGGGTTGGATTAGCATTTCAGGTAGGGTTGGGTTCATTTTTCTGAACCCGAACTGAATCGGTTCGGTTTCGGGTTCGTGGATAATTATACATCGATTTGTGTTTATTTGTGAATTTTTAATATATTTTATCTAAGATTGTATTTGAATAATTATAAATTGTGGATAAATAAAACTAAAAAAATCCGATAACACGACAACCCAACCTGAAGGTTGGGTTGGGTTGAGTTGTGAAAATTTTCGGGCTGGGTTGGGTTATCAATCCAACCAATCTGAACTTTTGGGTTGGGTCAAAAAAATCCTTCAACCCAACCCGAACCATGTACATCCCTACTCATGGGTCATTTGTCATGGGCTAATTTTCAAGCCCTTAAAAAGGATGAGAGTGAGGTGGTTGGTATATCAACTTGCTTCCAGATTCATTTTAGTATGTGCAATCGGTTGATTCAAACCTCTAATATCTTTGTCGACCATAAGTGTCTTAACTAGTTTTGTTTGTTAAATCATTACCTGGTTGGTAGATATAATCTTTTGTTATATCCCTAACCCTTCTCTTGATTGGAGTCAGGATATGAATTTAATATACAAAGGCCCACATGCAGGTTATTATACAAAGGCCCACGTGTCTTAACTTAGTGCTTAACATGTGATAATTGTCTAGGTGTGGGTAGTTCACGGATAAAGCCTTTTCACCAATTGTTCAATTTCCTTGTAGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAGAACGGGTTTTAATCCTACAATCGCTTAGTTGTATTTCTTGAGGTATATTTGCCCTGTTCTGTTCATGCTAGTGTTGCCCCACATACTCTTTTATCTGGACATTGAATGGTGTTTGTTATTGCATTCTTAAAGATGATTAATATGTTTTGTTCATTCACTTCATTACTATCATCACCAGGATGATGCCATCAACACACCCTTATTTATAAATACAAACTAGTGAAAATAGCCTTAATGACTTCTAATTTCTAACTGAAATAGGCTACCTGTTGTTATGCCGTAACTTAATTACTTTGTTGTGCAATAATTTTCTCCGGATTATGAATTAGATCTAATAATCCCTGACTTTCTAATTTGAATCTCTATGATTTGATCTCCCATATTTGTTGAAGCAAGCCATGAAGTTCAAGCACTGCACTGGTTAAGCCGAACATGGGTTTTAAAAATCTCGAGGGAAAACTTGAAATGAAAAGTCTAAATAAGACAATATCTGCTAGCGGTGAGCCTGAGCTATTACAAATGGTATCAGAGCTAAACACCGGACGATGTACTAGCAAGGAGGCTGTTATCTAAAGGGGTAGACAGAGGCGGTGTGTCAATAAGGATGTCAGGCTTTCAAAGGGGGTGGATTTGGTGAAGGTCCCACATAGATTGAAGAAAGGAATTAGTGCGAGCTAGGACACTAGGCCTTGAACGGGATGGATTGTGAGATCACACATTGGTTGAAAAGGAGAACGAAAAACTTTTTATAAAAGTGTAGAAACCTCTCTTTAGGAGAGGTGTTTTAAAATCTAGACGGAAACCAAAGAGAAAATATTTGCTAGCAATAAGTCAAAAACCTTGTATTTAATTAGTAAGGGGTGAATTTCCAAATTTCCAACCATTCACACTTAGGATTATGAAATAAAAGAATCAACCAACTTTTAATATTTTGGCTTTAATCTTTAATAAGAAAAAGAAAAAGTTTAAAAAAAATGGTTAATATATTCGAGATAACCAC

mRNA sequence

GTGTCCAATTCCATACGTTTCAGTATATCATTGGAGGAAAATAGTTTATTATATAGGATCATTCACAGGTTAAAAGAACCCTACACGGCATAATTTCTTACACCGCAATTCCAGGCTTTCCCTCGCAGCATCTGATTAGAGGTTTTCACTTTACTCTTTATTATTCAAACCCTTACTTCTCATTTTCCCTTCATCAGTTCTTTCTTCTTCCATTTCCATTTTTCTTCCAATCGAAGAACGAAAATCCATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAGAACGGGTTTTAATCCTACAATCGCTTAGTTGTATTTCTTGAGGTATATTTGCCCTGTTCTGTTCATGCTAGTGTTGCCCCACATACTCTTTTATCTGGACATTGAATGGTGTTTGTTATTGCATTCTTAAAGATGATTAATATGTTTTGTTCATTCACTTCATTACTATCATCACCAGGATGATGCCATCAACACACCCTTATTTATAAATACAAACTAGTGAAAATAGCCTTAATGACTTCTAATTTCTAACTGAAATAGGCTACCTGTTGTTATGCCGTAACTTAATTACTTTGTTGTGCAATAATTTTCTCCGGATTATGAATTAGATCTAATAATCCCTGACTTTCTAATTTGAATCTCTATGATTTGATCTCCCATATTTGTTGAAGCAAGCCATGAAGTTCAAGCACTGCACTGGTTAAGCCGAACATGGGTTTTAAAAATCTCGAGGGAAAACTTGAAATGAAAAGTCTAAATAAGACAATATCTGCTAGCGGTGAGCCTGAGCTATTACAAATGGTATCAGAGCTAAACACCGGACGATGTACTAGCAAGGAGGCTGTTATCTAAAGGGGTAGACAGAGGCGGTGTGTCAATAAGGATGTCAGGCTTTCAAAGGGGGTGGATTTGGTGAAGGTCCCACATAGATTGAAGAAAGGAATTAGTGCGAGCTAGGACACTAGGCCTTGAACGGGATGGATTGTGAGATCACACATTGGTTGAAAAGGAGAACGAAAAACTTTTTATAAAAGTGTAGAAACCTCTCTTTAGGAGAGGTGTTTTAAAATCTAGACGGAAACCAAAGAGAAAATATTTGCTAGCAATAAGTCAAAAACCTTGTATTTAATTAGTAAGGGGTGAATTTCCAAATTTCCAACCATTCACACTTAGGATTATGAAATAAAAGAATCAACCAACTTTTAATATTTTGGCTTTAATCTTTAATAAGAAAAAGAAAAAGTTTAAAAAAAATGGTTAATATATTCGAGATAACCAC

Coding sequence (CDS)

ATGGCTCGATTTGCGATTCTCTTTGCTCTCATTTTGCTTCCTGCACTCGCCGTCGCAAGCCGGCCCGTTAGAACTCCGTTCCTTGTTCGTGGTAAAGTGTTCTGTGATACTTGCGTTGCCGGCTTCGAAACCTCCGCTACCACCTACATTCCCGGTGCTAAGGTCGGAATTGAATGCAAAGACAGGAACACAATGGAACTTCTATATAAGCATGAGGCCACGACAGACTCCACTGGTTCTTACTCACTCTTAGTCAATGAAGACCACGAGGACCAAGTTTGTGATGCCGTACTAATCAGCAGCCCTCAGAAGGATTGTTCATTAGCAGCTGAAGGCCGTGACCGTGCCCGTGTAATCCTCACCCGCTACAACGGTATGGCCTCAAACGAACGTTATGTCAATGCCATGGGTTTTGCAAGATATGAACCTATGTCTGGCTGCAACCAAGTCCTCAGTCAGTACCAGGACATCGAAGATTAG

Protein sequence

MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED
Homology
BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q9LX15 (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.1e-29
Identity = 71/151 (47.02%), Postives = 87/151 (57.62%), Query Frame = 0

Query: 4   FAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRN 63
           F  L A++ +  L +A+  V TPF + G V+CDTC  GFET AT YI GA+V I CKDR 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  TMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRY 123
           T++      A T   G Y + V  D +DQ C A L+ SP   C  A  GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGMASNERYVNAMGFARYEPMSGCNQVLSQY 155
           NG AS   Y NAMGF R EP+ GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: P33050 (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 59/155 (38.06%), Postives = 95/155 (61.29%), Query Frame = 0

Query: 5   AILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNT 64
           A++  L ++ + A A  P    ++++G+V+CDTC AGF T+ T YI GAKV +ECK   T
Sbjct: 13  AVILCLCVVLSCAAADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGT 72

Query: 65  MELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYN 124
            +L    +  TD+TG+Y++ + + HE+ +C  VL++SP+KDC      RDRA V+LTR  
Sbjct: 73  GKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNV 132

Query: 125 GMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           G++ + R  N +G+ +  P+  C  +L Q    +D
Sbjct: 133 GISDSLRPANPLGYFKDVPLPVCAALLKQLDSDDD 167

BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q8H6L7 (Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-25
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 0

Query: 27  FLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVN 86
           F+V G+V+CD C AGFET+ +  + GA V ++C+  N  E   K EATTD  G Y + ++
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 87  EDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNE-RYVNAMGFARYEPMS 146
           +DH++++C+ VL  SP   CS   E RDRARV LT  NG+     RY N + F R EP+ 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQYQDIED 160
            C  +L  Y D+ D
Sbjct: 126 ECGGILQAY-DLRD 138

BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q7M1X5 (Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 0

Query: 27  FLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRNTMELLYKHEATTDSTGSYSLLVN 86
           F+V G+V+CD C AGFET+ +  + GA V ++C+  +  E   K EATTD  G Y + ++
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEID 65

Query: 87  EDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRYNGMASNE-RYVNAMGFARYEPMS 146
           +DH++++C+ VL  SP K CS   E RDRARV LT   G+     RY N + F R EP+ 
Sbjct: 66  QDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLK 125

Query: 147 GCNQVLSQY 155
            C  +L  Y
Sbjct: 126 ECGGILQAY 134

BLAST of CmaCh05G004850 vs. ExPASy Swiss-Prot
Match: Q8LGR0 (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0

Query: 2   ARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKD 61
           A F ++ AL +L +LA  +      F V+G V+CDTC   F T  +T + GA V +EC++
Sbjct: 6   AVFLLVGALCVL-SLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRN 65

Query: 62  RNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAE---GRDRARV 121
                  +K EA TD  G YS+ VN D ED +C+  L+ SP  +CS  +     +  A+V
Sbjct: 66  ITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKV 125

Query: 122 ILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQ 154
            LT  NG AS+ R  NA+GF R EP+  C +VL +
Sbjct: 126 SLTSNNGEASDIRSANALGFMRKEPLKECPEVLKE 159

BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 201.1 bits (510), Expect = 6.9e-52
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = 0

Query: 1   MARFAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECK 60
           M++  +L AL  LPALA+A+RP + PF+VRG+V+CDTC+AGFET A+TYI GA V +ECK
Sbjct: 1   MSKAVLLVALCFLPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECK 60

Query: 61  DRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVIL 120
           DR TMEL Y HEA TDSTGSY +LVNEDH++Q CDA+L+ S Q  CS  + G DRARV L
Sbjct: 61  DRRTMELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTL 120

Query: 121 TRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           TR+NG+AS++R+ N MGF R   M GC  ++  YQ+ ED
Sbjct: 121 TRFNGIASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT1G78040.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 0

Query: 1   MARFAILFALILLPALAVASRP---VRTPFLVRGKVFCDTCVAGFETSATTY-IPGAKVG 60
           MA+  +L  L +LPA+A+A+R     +   +V+G  +CD C  GFET  ++Y IPGA V 
Sbjct: 1   MAKLVMLLVLCILPAIAMAARRGNIGKNTMVVQGSTYCDICKFGFETPESSYFIPGATVK 60

Query: 61  IECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRA 120
           + CKDR TME +Y  +A +D  G Y  +V++DH DQ+CD +L+ S  K CS  + GR+++
Sbjct: 61  LSCKDRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKS 120

Query: 121 RVILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           RVIL  Y+G+AS  R+ N MGF +      C+ +  +Y   ED
Sbjct: 121 RVILNHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDED 163

BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT1G78040.2 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 0

Query: 1   MARFAILFALILLPALAVASRP---VRTPFLVRGKVFCDTCVAGFETSATTY-IPGAKVG 60
           MA+  +L  L +LPA+A+A+R     +   +V+G  +CD C  GFET  ++Y IPGA V 
Sbjct: 1   MAKLVMLLVLCILPAIAMAARRGNIGKNTMVVQGSTYCDICKFGFETPESSYFIPGATVK 60

Query: 61  IECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRA 120
           + CKDR TME +Y  +A +D  G Y  +V++DH DQ+CD +L+ S  K CS  + GR+++
Sbjct: 61  LSCKDRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKS 120

Query: 121 RVILTRYNGMASNERYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           RVIL  Y+G+AS  R+ N MGF +      C+ +  +Y   ED
Sbjct: 121 RVILNHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDED 163

BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT5G10130.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.3e-30
Identity = 71/151 (47.02%), Postives = 87/151 (57.62%), Query Frame = 0

Query: 4   FAILFALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKVGIECKDRN 63
           F  L A++ +  L +A+  V TPF + G V+CDTC  GFET AT YI GA+V I CKDR 
Sbjct: 5   FVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKDRV 64

Query: 64  TMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEGRDRARVILTRY 123
           T++      A T   G Y + V  D +DQ C A L+ SP   C  A  GR  A VILTR 
Sbjct: 65  TLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILTRS 124

Query: 124 NGMASNERYVNAMGFARYEPMSGCNQVLSQY 155
           NG AS   Y NAMGF R EP+ GC  +  +Y
Sbjct: 125 NGAASTRHYANAMGFFRDEPLRGCAALRKRY 155

BLAST of CmaCh05G004850 vs. TAIR 10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 0

Query: 1   MARFAILF-----ALILLPALAVASRPVRTPFLVRGKVFCDTCVAGFETSATTYIPGAKV 60
           MA+F I+F         L     A       F ++G V+CDTC   F T  + ++ GAKV
Sbjct: 1   MAKFFIVFLASALCFTTLVHFTAADADDFDKFHIKGSVYCDTCRVQFITRISKFLEGAKV 60

Query: 61  GIECKDRNTMELLYKHEATTDSTGSYSLLVNEDHEDQVCDAVLISSPQKDCSLAAEG--- 120
            +ECK R    +    EA TD+ G+Y + V  DHE++VC+ VL+ SP  +C         
Sbjct: 61  KLECKGRENQTVTLTKEAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEFL 120

Query: 121 RDRARVILTRYNGMASNE-RYVNAMGFARYEPMSGCNQVLSQYQDIED 160
           R+ AR+ LT  +G+ SNE R +N +GF R  P++ C QV  +   + D
Sbjct: 121 RNAARISLTANDGIVSNETRTINPLGFMRKTPLAECPQVFKELGIVPD 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LX156.1e-2947.02Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1[more]
P330502.2e-2638.06Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1[more]
Q8H6L74.1e-2543.28Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1[more]
Q7M1X52.7e-2442.64Major pollen allergen Lol p 11 OS=Lolium perenne OX=4522 PE=1 SV=1[more]
Q8LGR03.2e-2239.35Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT4G08685.16.9e-5259.75Pollen Ole e 1 allergen and extensin family protein [more]
AT1G78040.11.3e-3141.72Pollen Ole e 1 allergen and extensin family protein [more]
AT1G78040.21.3e-3141.72Pollen Ole e 1 allergen and extensin family protein [more]
AT5G10130.14.3e-3047.02Pollen Ole e 1 allergen and extensin family protein [more]
AT1G29140.14.3e-2235.71Pollen Ole e 1 allergen and extensin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_1coord: 29..111
e-value: 8.4E-17
score: 61.4
NoneNo IPR availablePANTHERPTHR31614:SF5ALLERGEN-LIKE PROTEIN BRSN20coord: 1..158
IPR006041Pollen allergen Ole e 1 familyPANTHERPTHR31614PROTEIN DOWNSTREAM OF FLC-RELATEDcoord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G004850.1CmaCh05G004850.1mRNA