CmaCh05G004550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G004550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein BIG GRAIN 1-like E
Location	Cma_Chr05: 2098206 .. 2099567 (-)
RNA-Seq Expression	CmaCh05G004550
Synteny	CmaCh05G004550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCACATTCATCTATGCCTCCTAAAGCACAATTGCCTTTCATTTTCATGTGGGTCTTCCTCTTAATTCATTTCCATTTCTCACACTCTTCAATATCTCCCAAGATCCCTCTTATGTCCTTCAATTCTTCCATATATATAGCTTTTTACACCAAGTTTTGCACAACAAGCTCGCCCTTACGAAGAACAAAGATGTCGCTCTCGAGCTCGGAGATGATCAATAAGAAGATGTTCCACCATAGGAGAGCTTCAAAGGAGCTCGAGGTATTCGAAGCTGCTCGATATTTCTCCGATTACAATGAAACTTCGGCGACAATGAACGGTTTCGGCGCAAAGTTTACTCCGAAAGTGAAGAAGAAAGACAAAGGATGGATCAAAGGGAGAATCAGCTTAGACATGCAGGTTTTCGATCTTAATATGAAGTTCGAGTCCCATTATTGAAGTTCGGGCGTAAATTTAACCATGTTTTTTTTTCCGACATAGGTGAAGAACATCCTTAATCTCCCCGAACATTTTCCCCAACATTCTTACAAAGTTGAAAAGCATGTTACAAAGGAGAAGAAGTACAAACAACCAAGCTCACCTGGTGGGAGACTAGCAAGCTTTCTAAACTCTCTCTTTAGCCATTCAAGTTCGAAGAAGAAGAAGTCAAAACTTTTTGCGCAATCCGTGGAAGACATAGCGGAAGACGAAAGCCGAACGTCGAAGAGAAGGATTAGCATCAGCCATTTTCGATCCTCGAACACAGCTGCAACGGATGCTAAGTTCATCTATTCTTCGTCTCCGGGCAATAATTCAGGTAAACCCCGAATCAACTTAACCTAAATATATATATATTCTAATCATTTATTCATATTCTTAACGAATAGGTTTCAGAACACCGCCTCCGCACGTTCAAACCCCGACAAAGAGCTACAAGGAACTATTGTCGTTTTCGAAGTTCACCCGACACGTAAAATCAGCGGAGACGTTGGAGAAACGGGCTTCGAAACAAAAGAAGAAGAATTTGAGTAATTGTTCTTCAGAAAAAGATAGGGTTTGGGTTGAAAAACCATTGGGAGATGAAGAAATGAAGAAAAAATTGAAGAAATTTGAGCATGACATTAATATTATTGATGATATTGATGATGATGATGGTGGAGAAACAGATTCCAGCTCAGATTTGTTTGAATTACAGATCTATGATTTAGATTATTACTCAAATGGGTTGCCTGTTTATGAATCTACTGATATTGATAGCATCAAGAGAAGAAATTCAATCTCTAATGGTGTTTGTTGAGATGTAAGAAGAACAAACTTGGTCTTTAATGGTGTTTTGTAATTAAAAAAATTTCAACTTTTCGATTGATCTTTTGATTTTCTG

mRNA sequence

CCCCACATTCATCTATGCCTCCTAAAGCACAATTGCCTTTCATTTTCATGTGGGTCTTCCTCTTAATTCATTTCCATTTCTCACACTCTTCAATATCTCCCAAGATCCCTCTTATGTCCTTCAATTCTTCCATATATATAGCTTTTTACACCAAGTTTTGCACAACAAGCTCGCCCTTACGAAGAACAAAGATGTCGCTCTCGAGCTCGGAGATGATCAATAAGAAGATGTTCCACCATAGGAGAGCTTCAAAGGAGCTCGAGGTATTCGAAGCTGCTCGATATTTCTCCGATTACAATGAAACTTCGGCGACAATGAACGGTTTCGGCGCAAAGTTTACTCCGAAAGTGAAGAAGAAAGACAAAGGATGGATCAAAGGGAGAATCAGCTTAGACATGCAGGTGAAGAACATCCTTAATCTCCCCGAACATTTTCCCCAACATTCTTACAAAGTTGAAAAGCATGTTACAAAGGAGAAGAAGTACAAACAACCAAGCTCACCTGGTGGGAGACTAGCAAGCTTTCTAAACTCTCTCTTTAGCCATTCAAGTTCGAAGAAGAAGAAGTCAAAACTTTTTGCGCAATCCGTGGAAGACATAGCGGAAGACGAAAGCCGAACGTCGAAGAGAAGGATTAGCATCAGCCATTTTCGATCCTCGAACACAGCTGCAACGGATGCTAAGTTCATCTATTCTTCGTCTCCGGGCAATAATTCAGGTTTCAGAACACCGCCTCCGCACGTTCAAACCCCGACAAAGAGCTACAAGGAACTATTGTCGTTTTCGAAGTTCACCCGACACGTAAAATCAGCGGAGACGTTGGAGAAACGGGCTTCGAAACAAAAGAAGAAGAATTTGAGTAATTGTTCTTCAGAAAAAGATAGGGTTTGGGTTGAAAAACCATTGGGAGATGAAGAAATGAAGAAAAAATTGAAGAAATTTGAGCATGACATTAATATTATTGATGATATTGATGATGATGATGGTGGAGAAACAGATTCCAGCTCAGATTTGTTTGAATTACAGATCTATGATTTAGATTATTACTCAAATGGGTTGCCTGTTTATGAATCTACTGATATTGATAGCATCAAGAGAAGAAATTCAATCTCTAATGGTGTTTGTTGAGATGTAAGAAGAACAAACTTGGTCTTTAATGGTGTTTTGTAATTAAAAAAATTTCAACTTTTCGATTGATCTTTTGATTTTCTG

Coding sequence (CDS)

ATGCCTCCTAAAGCACAATTGCCTTTCATTTTCATGTGGGTCTTCCTCTTAATTCATTTCCATTTCTCACACTCTTCAATATCTCCCAAGATCCCTCTTATGTCCTTCAATTCTTCCATATATATAGCTTTTTACACCAAGTTTTGCACAACAAGCTCGCCCTTACGAAGAACAAAGATGTCGCTCTCGAGCTCGGAGATGATCAATAAGAAGATGTTCCACCATAGGAGAGCTTCAAAGGAGCTCGAGGTATTCGAAGCTGCTCGATATTTCTCCGATTACAATGAAACTTCGGCGACAATGAACGGTTTCGGCGCAAAGTTTACTCCGAAAGTGAAGAAGAAAGACAAAGGATGGATCAAAGGGAGAATCAGCTTAGACATGCAGGTGAAGAACATCCTTAATCTCCCCGAACATTTTCCCCAACATTCTTACAAAGTTGAAAAGCATGTTACAAAGGAGAAGAAGTACAAACAACCAAGCTCACCTGGTGGGAGACTAGCAAGCTTTCTAAACTCTCTCTTTAGCCATTCAAGTTCGAAGAAGAAGAAGTCAAAACTTTTTGCGCAATCCGTGGAAGACATAGCGGAAGACGAAAGCCGAACGTCGAAGAGAAGGATTAGCATCAGCCATTTTCGATCCTCGAACACAGCTGCAACGGATGCTAAGTTCATCTATTCTTCGTCTCCGGGCAATAATTCAGGTTTCAGAACACCGCCTCCGCACGTTCAAACCCCGACAAAGAGCTACAAGGAACTATTGTCGTTTTCGAAGTTCACCCGACACGTAAAATCAGCGGAGACGTTGGAGAAACGGGCTTCGAAACAAAAGAAGAAGAATTTGAGTAATTGTTCTTCAGAAAAAGATAGGGTTTGGGTTGAAAAACCATTGGGAGATGAAGAAATGAAGAAAAAATTGAAGAAATTTGAGCATGACATTAATATTATTGATGATATTGATGATGATGATGGTGGAGAAACAGATTCCAGCTCAGATTTGTTTGAATTACAGATCTATGATTTAGATTATTACTCAAATGGGTTGCCTGTTTATGAATCTACTGATATTGATAGCATCAAGAGAAGAAATTCAATCTCTAATGGTGTTTGTTGA

Protein sequence

MPPKAQLPFIFMWVFLLIHFHFSHSSISPKIPLMSFNSSIYIAFYTKFCTTSSPLRRTKMSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNGFGAKFTPKVKKKDKGWIKGRISLDMQVKNILNLPEHFPQHSYKVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSSSKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNTAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRASKQKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSSSDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNGVC

Homology

[Close]

BLAST of CmaCh05G004550 vs. ExPASy Swiss-Prot
Match: Q93Z37 (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana OX=3702 GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-34
Identity = 120/329 (36.47%), Postives = 181/329 (55.02%), Query Frame = 0


Query: 61  SLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNGFGAKFTPKVKKKDK--- 120
           S  S ++  +    H+R S+EL+VFEAA YF  YNE S+  +G   K+     +++    
Sbjct: 8   SAESDKLSRRISLTHKRNSEELDVFEAAVYFG-YNEASSGDHGHTQKYGYNAAREENPRR 67

Query: 121 -GWIKG--RISLDMQVK---NILNL-PEHFPQHSYKVEKHVTKEKKYKQPSSPGGRLASF 180
            G + G  RISLD+ ++    + +L  +H  +H     K      ++KQPSSPGG++ASF
Sbjct: 68  WGILGGGRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHKQPSSPGGKIASF 127

Query: 181 LNSLFSHSSSKKKKSKLFAQS-------VEDIAEDESRTSKRRISISHFRSSN------- 240
           LNSLF  + SKK KSK  +++        E+I        +RR SISHF SS+       
Sbjct: 128 LNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTT 187

Query: 241 --TAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRAS 300
             TA++ +K + SSS   +SGFRTPPP++ TPTK+YK+ L+++  T+ V   ET   +  
Sbjct: 188 TTTASSSSKSLISSS---SSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEY 247

Query: 301 K--QKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSSSD 360
               +K  +    SE  R+W +    D++ + K +             +DDG E+DSSSD
Sbjct: 248 SWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKRE------------GEDDGMESDSSSD 307

Query: 361 LFELQIYDLDYYSNGLPVYESTDIDSIKR 362
           LFELQ Y+L     GLPVYE+T++ +I +
Sbjct: 308 LFELQNYELS--RGGLPVYETTNVANINK 318

[Close]

BLAST of CmaCh05G004550 vs. ExPASy Swiss-Prot
Match: Q9SLL2 (Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana OX=3702 GN=At1g54200 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 93/350 (26.57%), Postives = 144/350 (41.14%), Query Frame = 0


Query: 35  SFNSSIYIAFYTKF---CTTSSPLRRTKMSLSSSEMINKKMFHHRRASKELEVFEAARYF 94
           SF+S++    Y       T SS +R+TK        ++         SK L+  E   +F
Sbjct: 27  SFSSTLLDQIYRSIDDSSTNSSSMRKTKHQNREDTRVSANRRDDFNRSKNLKTIEPV-FF 86

Query: 95  SDYNETSATMNGFGAKFTPKVKKKDKGWIKGRISLDMQVKNILNLPEHFPQH-------- 154
              + +S+  +GF +  +    ++ K      IS    ++  +   E  PQ+        
Sbjct: 87  KHSSSSSSDSSGFSSSESDYFYRRSKS--SPAISHPKPIRTTVERFERSPQNHRPNSSNK 146

Query: 155 ---------SYKVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSSSKKKKSKLFAQSVED 214
                      K  K  +  KK KQP SPGGRLA+FLNS+F+ + + KK +K+       
Sbjct: 147 QEHGSFLKTKSKALKIYSDLKKVKQPISPGGRLATFLNSIFTGAGNTKKLNKINTTVTST 206

Query: 215 IAEDESRTSKRRI-SISHFRSSNTAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKEL 274
            A   + +S     S S F  S  + T      SSS  +    R  P +V     S    
Sbjct: 207 TAAAAAASSTTTCSSASSFSRSCLSKTP-----SSSEKSKRSVRFCPVNVIFDEDS---- 266

Query: 275 LSFSKFTRHVKSAETLEKRASKQKKKNLSNCSSEKDRVWVE--KPLGDEEMKKKLKKFEH 334
              SK+           +R  +  +  L N   E++R  +E  K L     KK  +  E 
Sbjct: 267 ---SKYNNKNNKVYGNNEREYESIRHTLENRVMEENRRVIEAAKELLRSYQKKNKEVIEV 326

Query: 335 DINIIDDIDDDDGGETDSSSDLFE---LQIYDLDYYSNGLPVYESTDIDS 359
            +   D+ DDDD   + +SSDLFE   L    +D Y   LPVYE+T +++
Sbjct: 327 SVE-DDEEDDDDDALSCTSSDLFELDNLSAIGIDRYREELPVYETTRLNT 360

[Close]

BLAST of CmaCh05G004550 vs. ExPASy Swiss-Prot
Match: Q9LYH0 (Protein BIG GRAIN 1-like D OS=Arabidopsis thaliana OX=3702 GN=At5g12050 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04
Identity = 87/329 (26.44%), Postives = 135/329 (41.03%), Query Frame = 0


Query: 36  FNSSIYIAFYTKFCTTSSPLRRTKMSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYN 95
           F+SS     + K  T+S PL          +  +K +FH  RA+         R + DY+
Sbjct: 75  FSSSDTELTHGKKTTSSRPLCFGPSKTKPRKTEDKTLFHQNRAT---------RVYDDYD 134

Query: 96  ETSATMNGFGAKFTPKVKKKDKGWIKGRISLDMQVKNILNLPEHFPQHSYKVEKHVTKEK 155
             S           PK  + D+ W   R                    + +  K    +K
Sbjct: 135 YASD---------VPKFNRHDENWENTR--------------------NRRSVKSSGNQK 194

Query: 156 KYKQPSSPGGRLASFLNSLFSHSSSKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSS 215
           K K P+SPGGR+ +FLNSLFS++S +    K + +     + D+S    R+ S  +  S+
Sbjct: 195 KPKTPASPGGRIVNFLNSLFSNNSKQSNAVKSYPRKT---SYDDS-AYVRKTSNDYHSST 254

Query: 216 NTAATDAKFIYSSSPGNNSGFRTPPPHVQTPTK-SYKELLSFSKFTRHVKSAETLEKRAS 275
            T ++ + F  S     N G+      ++   + S   ++    FT   +   +    A 
Sbjct: 255 TTCSSASSFSRSCM---NKGYEKSSGRIKRSVRFSPVNVIVPESFTSKEEDYFS-NGNAR 314

Query: 276 KQKKKNLSNCSSEKDRVWVEKPLGD-----EEMKKKLKKFEHDINIIDDIDDDDGGETDS 335
           K  KKN+ +           + L D     E    K   FE D    D+ DDDD   +DS
Sbjct: 315 KSVKKNVEDGGRRSVEEIAREFLRDYHKNHENSLVKTNGFE-DYEDDDEDDDDDDVASDS 356

Query: 336 SSDLFELQI----YDLDYYSNGLPVYEST 355
           SSDLFEL +    +  + Y + LPVYE+T
Sbjct: 375 SSDLFELDLVGNHHHHNVYGDELPVYETT 356

[Close]

BLAST of CmaCh05G004550 vs. TAIR 10
Match: AT1G69160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits to 172 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-35
Identity = 120/329 (36.47%), Postives = 181/329 (55.02%), Query Frame = 0


Query: 61  SLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNGFGAKFTPKVKKKDK--- 120
           S  S ++  +    H+R S+EL+VFEAA YF  YNE S+  +G   K+     +++    
Sbjct: 8   SAESDKLSRRISLTHKRNSEELDVFEAAVYFG-YNEASSGDHGHTQKYGYNAAREENPRR 67

Query: 121 -GWIKG--RISLDMQVK---NILNL-PEHFPQHSYKVEKHVTKEKKYKQPSSPGGRLASF 180
            G + G  RISLD+ ++    + +L  +H  +H     K      ++KQPSSPGG++ASF
Sbjct: 68  WGILGGGRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHKQPSSPGGKIASF 127

Query: 181 LNSLFSHSSSKKKKSKLFAQS-------VEDIAEDESRTSKRRISISHFRSSN------- 240
           LNSLF  + SKK KSK  +++        E+I        +RR SISHF SS+       
Sbjct: 128 LNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTT 187

Query: 241 --TAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRAS 300
             TA++ +K + SSS   +SGFRTPPP++ TPTK+YK+ L+++  T+ V   ET   +  
Sbjct: 188 TTTASSSSKSLISSS---SSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEY 247

Query: 301 K--QKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSSSD 360
               +K  +    SE  R+W +    D++ + K +             +DDG E+DSSSD
Sbjct: 248 SWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKRE------------GEDDGMESDSSSD 307

Query: 361 LFELQIYDLDYYSNGLPVYESTDIDSIKR 362
           LFELQ Y+L     GLPVYE+T++ +I +
Sbjct: 308 LFELQNYELS--RGGLPVYETTNVANINK 318

[Close]

BLAST of CmaCh05G004550 vs. TAIR 10
Match: AT1G54200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-06
Identity = 93/350 (26.57%), Postives = 144/350 (41.14%), Query Frame = 0


Query: 35  SFNSSIYIAFYTKF---CTTSSPLRRTKMSLSSSEMINKKMFHHRRASKELEVFEAARYF 94
           SF+S++    Y       T SS +R+TK        ++         SK L+  E   +F
Sbjct: 27  SFSSTLLDQIYRSIDDSSTNSSSMRKTKHQNREDTRVSANRRDDFNRSKNLKTIEPV-FF 86

Query: 95  SDYNETSATMNGFGAKFTPKVKKKDKGWIKGRISLDMQVKNILNLPEHFPQH-------- 154
              + +S+  +GF +  +    ++ K      IS    ++  +   E  PQ+        
Sbjct: 87  KHSSSSSSDSSGFSSSESDYFYRRSKS--SPAISHPKPIRTTVERFERSPQNHRPNSSNK 146

Query: 155 ---------SYKVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSSSKKKKSKLFAQSVED 214
                      K  K  +  KK KQP SPGGRLA+FLNS+F+ + + KK +K+       
Sbjct: 147 QEHGSFLKTKSKALKIYSDLKKVKQPISPGGRLATFLNSIFTGAGNTKKLNKINTTVTST 206

Query: 215 IAEDESRTSKRRI-SISHFRSSNTAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKEL 274
            A   + +S     S S F  S  + T      SSS  +    R  P +V     S    
Sbjct: 207 TAAAAAASSTTTCSSASSFSRSCLSKTP-----SSSEKSKRSVRFCPVNVIFDEDS---- 266

Query: 275 LSFSKFTRHVKSAETLEKRASKQKKKNLSNCSSEKDRVWVE--KPLGDEEMKKKLKKFEH 334
              SK+           +R  +  +  L N   E++R  +E  K L     KK  +  E 
Sbjct: 267 ---SKYNNKNNKVYGNNEREYESIRHTLENRVMEENRRVIEAAKELLRSYQKKNKEVIEV 326

Query: 335 DINIIDDIDDDDGGETDSSSDLFE---LQIYDLDYYSNGLPVYESTDIDS 359
            +   D+ DDDD   + +SSDLFE   L    +D Y   LPVYE+T +++
Sbjct: 327 SVE-DDEEDDDDDALSCTSSDLFELDNLSAIGIDRYREELPVYETTRLNT 360

[Close]

BLAST of CmaCh05G004550 vs. TAIR 10
Match: AT5G12050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 87/329 (26.44%), Postives = 135/329 (41.03%), Query Frame = 0


Query: 36  FNSSIYIAFYTKFCTTSSPLRRTKMSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYN 95
           F+SS     + K  T+S PL          +  +K +FH  RA+         R + DY+
Sbjct: 75  FSSSDTELTHGKKTTSSRPLCFGPSKTKPRKTEDKTLFHQNRAT---------RVYDDYD 134

Query: 96  ETSATMNGFGAKFTPKVKKKDKGWIKGRISLDMQVKNILNLPEHFPQHSYKVEKHVTKEK 155
             S           PK  + D+ W   R                    + +  K    +K
Sbjct: 135 YASD---------VPKFNRHDENWENTR--------------------NRRSVKSSGNQK 194

Query: 156 KYKQPSSPGGRLASFLNSLFSHSSSKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSS 215
           K K P+SPGGR+ +FLNSLFS++S +    K + +     + D+S    R+ S  +  S+
Sbjct: 195 KPKTPASPGGRIVNFLNSLFSNNSKQSNAVKSYPRKT---SYDDS-AYVRKTSNDYHSST 254

Query: 216 NTAATDAKFIYSSSPGNNSGFRTPPPHVQTPTK-SYKELLSFSKFTRHVKSAETLEKRAS 275
            T ++ + F  S     N G+      ++   + S   ++    FT   +   +    A 
Sbjct: 255 TTCSSASSFSRSCM---NKGYEKSSGRIKRSVRFSPVNVIVPESFTSKEEDYFS-NGNAR 314

Query: 276 KQKKKNLSNCSSEKDRVWVEKPLGD-----EEMKKKLKKFEHDINIIDDIDDDDGGETDS 335
           K  KKN+ +           + L D     E    K   FE D    D+ DDDD   +DS
Sbjct: 315 KSVKKNVEDGGRRSVEEIAREFLRDYHKNHENSLVKTNGFE-DYEDDDEDDDDDDVASDS 356

Query: 336 SSDLFELQI----YDLDYYSNGLPVYEST 355
           SSDLFEL +    +  + Y + LPVYE+T
Sbjct: 375 SSDLFELDLVGNHHHHNVYGDELPVYETT 356

[Close]

BLAST of CmaCh05G004550 vs. TAIR 10
Match: AT3G13980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 93/363 (25.62%), Postives = 150/363 (41.32%), Query Frame = 0


Query: 35  SFNSSIYIAFYTKFCTTSSPLRRTKMSLSSSEMINKKMFHHRRASKELEV---------- 94
           SF+S++    Y     +S P           E I KK  HH++ +  L            
Sbjct: 18  SFSSTLLDQIYRSIDDSSPP--------PPLESIKKKKHHHQQRNASLHEDREISPIYHR 77

Query: 95  ------FEAARYFSDY----NETSATMNGFGAKFTPKVKKKDKGWIKGRISLDMQVKNI- 154
                 FE +R  +D+    N +S+  +GF +  +     + K       S   Q K I 
Sbjct: 78  RSIAADFERSRRKTDFLRHSNSSSSDSSGFSSSESDSFHGRSKSSASPPSSSRQQPKPIR 137

Query: 155 ---------LNLPEH---FPQHSYKVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSSSK 214
                    +  P+    F +   K  K  +  KK KQP SPGGRLA+FLNSLF+++++ 
Sbjct: 138 TSSVDHSSAVQKPKELGGFLRTKSKALKIYSDLKKVKQPISPGGRLATFLNSLFTNAATN 197

Query: 215 KKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNTAATDAKFIYSSSPGNNSGFRTPPP 274
            KK K   ++      +E  +S    S S F  S  + T      SSS  +    R  P 
Sbjct: 198 PKKHK---KTTTVAVVEEPHSSSTCSSASSFSRSCLSKTP-----SSSGKSKRSVRFCPV 257

Query: 275 HVQTPTKSYKELLSFSKFTRHVKSAETLEKRASKQKKKNLSNCSSEKDRVWVEKPLGDEE 334
           +V     S     SF+       +    +   +K+ +++     + KD +          
Sbjct: 258 NVILDEDS-----SFT-MPYAYNNERLYDNNEAKRVEEHRRVIQAAKDLL--------RT 317

Query: 335 MKKKLKKFEHDINIIDDIDDDDGGETDSSSDLFELQ---IYDLDYYSNGLPVYESTDIDS 362
              K K    +IN +++ DD+D   + +SSDLFEL+      ++ Y   LPVYE+T +D+
Sbjct: 318 YHNKNKVTTTNINNVEE-DDEDDAASCASSDLFELENLSAIGIERYREELPVYETTRLDN 349

The following BLAST results are available for this feature:

BLAST of CmaCh05G004550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z37	3.0e-34	36.47	Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana OX=3702 GN=At1g69160 PE=2 SV=...	[more]
Q9SLL2	3.8e-05	26.57	Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana OX=3702 GN=At1g54200 PE=1 SV=...	[more]
Q9LYH0	1.4e-04	26.44	Protein BIG GRAIN 1-like D OS=Arabidopsis thaliana OX=3702 GN=At5g12050 PE=2 SV=...	[more]

BLAST of CmaCh05G004550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69160.1	2.1e-35	36.47	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G54200.1	2.7e-06	26.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G12050.1	1.0e-05	26.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G13980.1	1.1e-04	25.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33541:SF11	PROTEIN BIG GRAIN 1-LIKE E	coord: 62..369
IPR039621	Protein BIG GRAIN 1-like	PANTHER	PTHR33541	PROTEIN BIG GRAIN 1-LIKE A-RELATED	coord: 62..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G004550.1	CmaCh05G004550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005886	plasma membrane