CmaCh05G003990 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATAAGCTTCACAATTGGAGTTCTTGAAATTCCACCTTTGTATAGAGATGATTACTTTAAAACCATGATGCGAAATATGTATCCAATACGTGTCATTATTGGATTATTTGATATGCACAGAGAAAGACGTGAATTTCCTTGTGAGAGTCGGGATCATAATCAATGATATTGGAGGGAATGATAAAGAAGTTTCAGAATTGTTCAACAATCTCTGTAAATTTGTCATAGTCTCAGATTATTACCACTTCAACGATATCAACAAAGCTTTACGTAGATATTGCAATAGACTATGGAATAAGGCAAAAGCTTCACTCAAGCATAATTATTTGTAA ATGGATATAAGCTTCACAATTGGAGTTCTTGAAATTCCACCTTTGTATAGAGATGATTACTTTAAAACCATGATGCGAAATATGTATCCAATACAGAAAGACGTGAATTTCCTTGTGAGAGTCGGGATCATAATCAATGATATTGGAGGGAATGATAAAGAAGTTTCAGAATTGTTCAACAATCTCTGTAAATTTGTCATAGTCTCAGATTATTACCACTTCAACGATATCAACAAAGCTTTACGTAGATATTGCAATAGACTATGGAATAAGGCAAAAGCTTCACTCAAGCATAATTATTTGTAA ATGGATATAAGCTTCACAATTGGAGTTCTTGAAATTCCACCTTTGTATAGAGATGATTACTTTAAAACCATGATGCGAAATATGTATCCAATACAGAAAGACGTGAATTTCCTTGTGAGAGTCGGGATCATAATCAATGATATTGGAGGGAATGATAAAGAAGTTTCAGAATTGTTCAACAATCTCTGTAAATTTGTCATAGTCTCAGATTATTACCACTTCAACGATATCAACAAAGCTTTACGTAGATATTGCAATAGACTATGGAATAAGGCAAAAGCTTCACTCAAGCATAATTATTTGTAA MDISFTIGVLEIPPLYRDDYFKTMMRNMYPIQKDVNFLVRVGIIINDIGGNDKEVSELFNNLCKFVIVSDYYHFNDINKALRRYCNRLWNKAKASLKHNYL Homology
BLAST of CmaCh05G003990 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 5.8e-12 Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = 0
BLAST of CmaCh05G003990 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08 Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 0
BLAST of CmaCh05G003990 vs. TAIR 10
Match: AT5G11290.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08 Identity = 37/123 (30.08%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of CmaCh05G003990 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08 Identity = 39/124 (31.45%), Postives = 59/124 (47.58%), Query Frame = 0
BLAST of CmaCh05G003990 vs. TAIR 10
Match: AT3G50150.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 54.7 bits (130), Expect = 5.1e-08 Identity = 40/125 (32.00%), Postives = 61/125 (48.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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