CmaCh05G003940 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAACCATACAATATGCCAGGAATTAGTGAAGGTGAAGAAGGTGAACAACCTCGTCGTAATGTTATTGTAGAATGTAGCATCTTTTGAGTTCTTAAACTGTTACGTAGTATGAATCATAGAGTCTATACCCCTCAAGTCATTTCTATAGGTCCATTTCACCATCATCGAAAGGATTTGTTAGCCACTGAGCCATATAAGCTTCGACGTTGTTCGAACTTTCTAAGCCGTCTAGGTAACGAGAGAGATTCATTGGAGTTGCTTAAGAAAAATACTCAAACTTGGATGAAAGAAGTTCGAAATTGGTATGCATAGCACATAAACATGAATGATAAGGAATTTGGTAACATGATGATTGTGGATGGTCGTTTCCTAGTAGAGTTTTTGATACAACATCATAACCGACACTGCCCAAATACATGCTTCCAAACTCCAAACAATTTAGATCTTACCTTCCACCAAAGATTTATCGAGCTATTTACTGATTTGATTATGTTGGAAAATCGAGTCCCTTTCTTCCTTCTTGAACGTTTGTTCTACCTTATACTAAATACCATCTCCATCTCCTTTGTATACTTAACCTATATGTTTTTTAAACTCGAACTTGTTGACAATTATTCTCTTTCTGATCTATCGTCGATAAAACCAAAGTACTTCTTTGATTTGTTAAGCTTCTACTTCGTTGTCTCTAAGACATCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATCGATAACTGAGCTTCACGAGGCTGGTGTCACCATTAAGAAAGCAGAAAATGCTGAATGTGCAATGAACCTAAGCTTCCAAAATGGGATTTTCACAATCCCACAATCCCACCTTTTAACCGTTGATGATTTCTTCGAACACACCATGCAAAATCTAATAGCATTTGAGCATTTTCCCTTGGAAAATGAAAGCAAGCGTATCCAATATATCGCATTCATGGATGATTTGATAAGAAAGGAGAAATATTTTAATTTACTTGTGAAAGCTGGAATCATAATCAACAAGATTGGAGATAGTGATAAAGAAGTTTCAAACTTGTTTAACAATCTCTGCAAATTTGTTGAACAACCATGTGATGGCGAGTTCAACAATATCAGCAAAGCTTTGCATAAGCATTGTGATAGACGATGA ATGACAAACCATACAATATGCCAGGAATTAGTGAAGGTGAAGAAGGTGAACAACCTCGTCGTAATCTTCTACTTCGTTGTCTCTAAGACATCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATCGATAACTGAGCTTCACGAGGCTGGTGTCACCATTAAGAAAGCAGAAAATGCTGAATGTGCAATGAACCTAAGCTTCCAAAATGGGATTTTCACAATCCCACAATCCCACCTTTTAACCGTTGATGATTTCTTCGAACACACCATGCAAAATCTAATAGCATTTGAGCATTTTCCCTTGGAAAATGAAAGCAAGCGTATCCAATATATCGCATTCATGGATGATTTGATAAGAAAGGAGAAATATTTTAATTTACTTGTGAAAGCTGGAATCATAATCAACAAGATTGGAGATAGTGATAAAGAAGTTTCAAACTTGTTTAACAATCTCTGCAAATTTGTTGAACAACCATGTGATGGCGAGTTCAACAATATCAGCAAAGCTTTGCATAAGCATTGTGATAGACGATGA ATGACAAACCATACAATATGCCAGGAATTAGTGAAGGTGAAGAAGGTGAACAACCTCGTCGTAATCTTCTACTTCGTTGTCTCTAAGACATCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATCGATAACTGAGCTTCACGAGGCTGGTGTCACCATTAAGAAAGCAGAAAATGCTGAATGTGCAATGAACCTAAGCTTCCAAAATGGGATTTTCACAATCCCACAATCCCACCTTTTAACCGTTGATGATTTCTTCGAACACACCATGCAAAATCTAATAGCATTTGAGCATTTTCCCTTGGAAAATGAAAGCAAGCGTATCCAATATATCGCATTCATGGATGATTTGATAAGAAAGGAGAAATATTTTAATTTACTTGTGAAAGCTGGAATCATAATCAACAAGATTGGAGATAGTGATAAAGAAGTTTCAAACTTGTTTAACAATCTCTGCAAATTTGTTGAACAACCATGTGATGGCGAGTTCAACAATATCAGCAAAGCTTTGCATAAGCATTGTGATAGACGATGA MTNHTICQELVKVKKVNNLVVIFYFVVSKTSLENNNNNSPITPPSITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLENESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVEQPCDGEFNNISKALHKHCDRR Homology
BLAST of CmaCh05G003940 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 4.0e-16 Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 0
BLAST of CmaCh05G003940 vs. TAIR 10
Match: AT3G50150.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13 Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 0
BLAST of CmaCh05G003940 vs. TAIR 10
Match: AT5G11290.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12 Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of CmaCh05G003940 vs. TAIR 10
Match: AT2G44930.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08 Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 0
BLAST of CmaCh05G003940 vs. TAIR 10
Match: AT5G22560.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08 Identity = 37/126 (29.37%), Postives = 61/126 (48.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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