CmaCh05G003500 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G003500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionEukaryotic translation initiation factor 5A
LocationCma_Chr05: 1543134 .. 1545347 (-)
RNA-Seq ExpressionCmaCh05G003500
SyntenyCmaCh05G003500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGTAATTCCTAAATAATAATAAATCTCTTCTTCATCTTCCTGGTTTTGTACGGAATTCCTCAATGTCGGACGAAGAGCATCAATTCGAGTCGAAGGCCGACGCCGGAGCCTCCAAGACCTTCCCTCAGCAGGCCGGAACCATCCGCAAGAATGGTTACCTTGTCATCAAGGGCCGTCCTTGTAAGGTATCCCCATTACAATCTTCTCTCTTTTTATTTTATTTACTTTTTATATAAAATGGTGGTTTCGATTATTGTTGGTTTAATGCCAAATTATTCCTGCCGCGCTCCTATATTTACGAATATGCATTGTGTAAATAAGAAAGTGGTGGAGATTTTTAGGTTGAAATTAGATTTTGGTCACTGTTCTTGCCTGTTTGTTTTCAGTAGTTTCCTGTATGATTTAGGCATTTAAAGATGTATCCATTAACCTTTTGTTTGAGTTGTCTTTTATTATATGGTTCAACGAATTAATAGTCGATTTTATAATGATTTCTTTTAAGGATTTCTGAGTTCTACTGACTTCGCTTTTATAAGCTTTTGCAATTAAAATTCTCAAAAATCTACTACTGATTGGACAGGTATTAAATAGATTTGGTTCTAAATCTCCAACGGTAAGGCTTACTAAATGTTATTTTCGTTCAGAGAGACTATAGCTGATCATCTTTTTGTTTCAATCCTATTGGGGATTCCAGTCCTGCTCTTGCTGGGAACTTGTAATTGTTGTTACTATTGCATTGTTACGGTGTTTTGACAATTGAATCGCTATGATTTATCATGCATCACTCCCATATTGCTGGATCTAAATGGGTCTCTTTCCATACATTGTTAGAGCATTACAAAAAACTCGTCTCCAATTCTACTTATTTGTTCATTCAAGAGGCAAGGTTTGAGAAGTTCTCTTCATGTGCTACCAAAGGAATTCCCAATTGGCATAACTGTGTAGGAGCTTTGATCTTTATATTACTCATTTTAATGATATTATGTTAAAGTAGGTAGTTGAGGTTTCTACGTCCAAGACTGGAAAGCATGGGCATGCTAAATGTCACTTTGTGGCAATAGATATATTCACCACCAAAAAAACTTGAAGATATTGTTCCATCTTCCCACAACTGTGATGTGAGTACCCCCCTTGTCTTGTTTGCTTATTGTTTTTGTTTTTGTTTTCTTTTTGGTGTGTTTTTAAATGTCGGGTTTGCATAGCTTTTCTGTCTCACATTCTCCCCGTCCCCTCTATAGGTTCCTGAGGTTACTCGTACAGATTATCAGCTTATCGACATCTCTGAAGATGGATTTGTGAGTTTCTTCCTAATTATTTTTCTATTTCGAGTACGAAAATTTAGGTTGACAATGGAATTCATGACATTTTTATGTTGATTCCAACTTGGTGGACATCATAGGTCTTAACAGAGATTTTCCTGTACAAATATATGATTAGTTCATATCTTACATGAAGCAGTTTGATCTTTACTTGGGTTAACAATGGAATGGTTAACAAGAAAAAATAAATTGAAGAGTTGAAGGCATATGAACAAGTAACTAATGAAGACTCATAGATTACATTGTGAGGTTAAATTGTTGATTGGTATCAATAGGTTGTCTGCTTTGTGCGGTATTCTGCAAGTCTGAAGCGTTAGTATTGTAGGTTACGACATCGTGTTGGATATACTTCAATGCAATGATTGACCCACTGAAATCTGGTTTGTTGTTAGGTGAGCCTCTTGACTGACAACGGAAGCACAAAGGATGATTTGAGGCTTCCTACGGATGATAGTTTACTTACTCAGGTAAGGCTCTGCACATACTTATTCTCCTAAATACACAAAACCACATGTTTACAAAGGCGTTTCATGCATCTGTTTCAGATTAAAGATGGGTTTGCAGGAGGAAAGGACCTTGTTGTGAGTGTCATGTCAGCCATGGGAGAGGAACAAATCTGTGGCTTGAAGGATATTGGCCCAAAGAGTTAACAAGTCTTCTCTTAAGCTTTGGTTGAGGATATTTATTCTTTTTGAATTTTGGATGTGTTTTTCTTTTTGTAGGAAGTTGTTTAATATTCTCTGAACAAATGGACATAGATTTTCATAAGTAGAAAGCATAGGGAGTTTCATAACTTGTGAACTGTTCTTCTCTCTATTGTCGTTCTTTTAACCTTAAACGGTGTGAGATCCCACGTCGGTTGGAAAGGGGAGCAAATATTTTTTATAAGTG

mRNA sequence

AAATTGTAATTCCTAAATAATAATAAATCTCTTCTTCATCTTCCTGGTTTTGTACGGAATTCCTCAATGTCGGACGAAGAGCATCAATTCGAGTCGAAGGCCGACGCCGGAGCCTCCAAGACCTTCCCTCAGCAGGCCGGAACCATCCGCAAGAATGGTTACCTTGTCATCAAGGGCCGTCCTTGTAAGGTAGTTGAGGTTTCTACGTCCAAGACTGGAAAGCATGGGCATGCTAAATGTCACTTTATATATTCACCACCAAAAAAACTTGAAGATATTGTTCCATCTTCCCACAACTGTGATGTTCCTGAGGTTACTCGTACAGATTATCAGCTTATCGACATCTCTGAAGATGGATTTGTGAGCCTCTTGACTGACAACGGAAGCACAAAGGATGATTTGAGGCTTCCTACGGATGATAGTTTACTTACTCAGATTAAAGATGGGTTTGCAGGAGGAAAGGACCTTGTTGTGAGTGTCATGTCAGCCATGGGAGAGGAACAAATCTGTGGCTTGAAGGATATTGGCCCAAAGAGTTAACAAGTCTTCTCTTAAGCTTTGGTTGAGGATATTTATTCTTTTTGAATTTTGGATGTGTTTTTCTTTTTGTAGGAAGTTGTTTAATATTCTCTGAACAAATGGACATAGATTTTCATAAGTAGAAAGCATAGGGAGTTTCATAACTTGTGAACTGTTCTTCTCTCTATTGTCGTTCTTTTAACCTTAAACGGTGTGAGATCCCACGTCGGTTGGAAAGGGGAGCAAATATTTTTTATAAGTG

Coding sequence (CDS)

ATGTCGGACGAAGAGCATCAATTCGAGTCGAAGGCCGACGCCGGAGCCTCCAAGACCTTCCCTCAGCAGGCCGGAACCATCCGCAAGAATGGTTACCTTGTCATCAAGGGCCGTCCTTGTAAGGTAGTTGAGGTTTCTACGTCCAAGACTGGAAAGCATGGGCATGCTAAATGTCACTTTATATATTCACCACCAAAAAAACTTGAAGATATTGTTCCATCTTCCCACAACTGTGATGTTCCTGAGGTTACTCGTACAGATTATCAGCTTATCGACATCTCTGAAGATGGATTTGTGAGCCTCTTGACTGACAACGGAAGCACAAAGGATGATTTGAGGCTTCCTACGGATGATAGTTTACTTACTCAGATTAAAGATGGGTTTGCAGGAGGAAAGGACCTTGTTGTGAGTGTCATGTCAGCCATGGGAGAGGAACAAATCTGTGGCTTGAAGGATATTGGCCCAAAGAGTTAA

Protein sequence

MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHFIYSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDDSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPKS
Homology
[Close]
BLAST of CmaCh05G003500 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.6e-76
Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHQFESKADAGASKT+PQQAGTIRKNG++VIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           D+LLTQIKDGFA GKDLVVSVMSAMGEEQIC LKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of CmaCh05G003500 vs. ExPASy Swiss-Prot
Match: P56336 (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.3e-75
Identity = 141/159 (88.68%), Postives = 147/159 (92.45%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHQFESKADAGASKT+PQQAGTIRK+GY+VIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLTDNG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           DSLL+QIKDGFA GKDLVVSVMSAMGEEQI  LKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]
BLAST of CmaCh05G003500 vs. ExPASy Swiss-Prot
Match: Q945F4 (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.5e-75
Identity = 140/159 (88.05%), Postives = 144/159 (90.57%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FE  ADAGASKT+PQQAGTIRKNGY+VIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLTDNGSTKDDL+LPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           DSLLTQIKDGFA GKDLVVSVMSAMGEEQIC LKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]
BLAST of CmaCh05G003500 vs. ExPASy Swiss-Prot
Match: Q9AXQ4 (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 8.0e-74
Identity = 139/159 (87.42%), Postives = 146/159 (91.82%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHQFESKADAGASKT+PQQAGTIRKNGY+VIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLTDNG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           ++LL+ IKDGFA GKDLVVSVMSAMGEEQI  LKDIGPK
Sbjct: 121 ENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]
BLAST of CmaCh05G003500 vs. ExPASy Swiss-Prot
Match: P56337 (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.8e-73
Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKT+PQQAGTIRK+G++VIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           D+LL Q+KDGFA GKDLV+SVMSAMGEEQICG+KDIGPK
Sbjct: 121 DTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]
BLAST of CmaCh05G003500 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-70
Identity = 133/159 (83.65%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FES +DAGASKT+PQQAGTIRKNGY+VIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V RTDYQLIDISEDG+VSLLTDNGSTKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           D+LL QIK GF  GKDLVVSVMSAMGEEQI  LKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]
BLAST of CmaCh05G003500 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 260.0 bits (663), Expect = 1.2e-69
Identity = 127/159 (79.87%), Postives = 142/159 (89.31%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EH FES +DAGASKT+PQQAG IRK G++VIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V R DYQLIDISEDGFVSLLTDNGSTKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIGPK 157
           ++LLTQ+K+GF  GKD+VVSVMSAMGEEQ+C LK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]
BLAST of CmaCh05G003500 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 234.6 bits (597), Expect = 5.5e-62
Identity = 114/157 (72.61%), Postives = 133/157 (84.71%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EH FE+ +++GASKT+PQ AG IRK G++VIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V R DYQLIDI+EDGFVSLLTD+G TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 DSLLTQIKDGFAGGKDLVVSVMSAMGEEQICGLKDIG 155
           D L  Q++ GF  GKD+VVSVMS+MGEEQIC +K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]
BLAST of CmaCh05G003500 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-49
Identity = 94/127 (74.02%), Postives = 107/127 (84.25%), Query Frame = 0 

Query: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EH FE+ +++GASKT+PQ AG IRK G++VIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  I---YSPPKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           +       KKLEDIVPSSHNCDVP V R DYQLIDI+EDGFVSLLTD+G TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 DSLLTQI 125
           D L  Q+
Sbjct: 121 DGLTAQL 126

The following BLAST results are available for this feature:
BLAST of CmaCh05G003500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P249226.6e-7688.68Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40... [more]
P563367.3e-7588.68Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EI... [more]
Q945F49.5e-7588.05Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV... [more]
Q9AXQ48.0e-7487.42Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE... [more]
P563371.8e-7384.91Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EI... [more]
BLAST of CmaCh05G003500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G13950.11.9e-7083.65eukaryotic elongation factor 5A-1 [more]
AT1G69410.11.2e-6979.87eukaryotic elongation factor 5A-3 [more]
AT1G26630.15.5e-6272.61Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein [more]
AT1G26630.21.4e-4974.02Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020189Translation elongation factor, IF5A C-terminalSMARTSM01376eIF_5a_2coord: 82..151
e-value: 2.4E-31
score: 120.1
IPR020189Translation elongation factor, IF5A C-terminalPFAMPF01287eIF-5acoord: 83..151
e-value: 8.0E-28
score: 96.4
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..82
e-value: 1.6E-33
score: 116.4
NoneNo IPR availableGENE3D2.40.50.140coord: 83..156
e-value: 4.2E-34
score: 118.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR11673:SF42BNAA07G09420D PROTEINcoord: 1..153
NoneNo IPR availableCDDcd04468S1_eIF5Acoord: 83..153
e-value: 2.59439E-31
score: 105.312
IPR001884Translation elongation factor IF5A-likeTIGRFAMTIGR00037TIGR00037coord: 18..149
e-value: 3.2E-31
score: 105.8
IPR001884Translation elongation factor IF5A-likePIRSFPIRSF003025Transl_init_eIF5Acoord: 1..154
e-value: 5.6E-56
score: 186.3
IPR001884Translation elongation factor IF5A-likePANTHERPTHR11673TRANSLATION INITIATION FACTOR 5A FAMILY MEMBERcoord: 1..153
IPR019769Translation elongation factor, IF5A, hypusine sitePROSITEPS00302IF5A_HYPUSINEcoord: 50..57
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 15..90
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 83..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G003500.1CmaCh05G003500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0006413 translational initiation
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003723 RNA binding