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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGATTGGATTTCCGAGACGATCAACGGCGGATCCCTACGCCTTGTCGACCTTCAGACGGGGATAAATGGTTGGGCCTCGCCGCCGGGGGACCTCTTTGCTCTCCGTTCCAAGAACTACTTGGCGAAACGGCAAAAATCTCCGTCTGGAGATTACCTGCTTTCTCCCGCCGGTGTTGATTGGCTGAAATCTAGTACCAAGCTTGACAACGTCCTTGCTCGCCCTGACAATCGCGTCGCGCAAGCGTTGAGGAGAGCGCAAGCCGTCGGTAAGTCGATGAAGAGTTTCATTATTGCGGTTAACATTCAAGTACCTGGGAAGGATCAGTACAGTGCCGTGTTCTACTTTGCTACTGAAGATCCGATTCCATCTGGCTCGCTTCTTCACCGTTTCATTAATGGCGATGATTTATTCAGAAATCAACGGTTGAAATTGGTGAATCGGATCGTGAAAGGGCCATGGATTGTTAAGAAAGCAGTAGGAAATTACAGTGCGTGTTTGTTAGGGAAGGCATTGACGTGCAATTACCACAGAGGACCTAATTATTTGGAGATTGATGTAGATATGGGGAGCTCAGCGTTAGCCAGTGCGATTTTGCATCTCGCGCTTGGATACGTTACCAACGTAACAGTAGATATGGGGTTTCTGGTGGAGGGGCAGACGGAGGAGGAGTTGCCGGAAAGGCTGTTTGGCGCCGTCCGGATTTGCCAGATGGAGATGTCGTCGGCGACTATAGTAGACGCGCCGACACTGGCGCGTGGATTATCATGTGCCAAGGTGAATCACCACAAACCTGGCGACGACGACAACTGA mRNA sequence ATGGTGGATTGGATTTCCGAGACGATCAACGGCGGATCCCTACGCCTTGTCGACCTTCAGACGGGGATAAATGGTTGGGCCTCGCCGCCGGGGGACCTCTTTGCTCTCCGTTCCAAGAACTACTTGGCGAAACGGCAAAAATCTCCGTCTGGAGATTACCTGCTTTCTCCCGCCGGTGTTGATTGGCTGAAATCTAGTACCAAGCTTGACAACGTCCTTGCTCGCCCTGACAATCGCGTCGCGCAAGCGTTGAGGAGAGCGCAAGCCGTCGGTAAGTCGATGAAGAGTTTCATTATTGCGGTTAACATTCAAGTACCTGGGAAGGATCAGTACAGTGCCGTGTTCTACTTTGCTACTGAAGATCCGATTCCATCTGGCTCGCTTCTTCACCGTTTCATTAATGGCGATGATTTATTCAGAAATCAACGGTTGAAATTGGTGAATCGGATCGTGAAAGGGCCATGGATTGTTAAGAAAGCAGTAGGAAATTACAGTGCGTGTTTGTTAGGGAAGGCATTGACGTGCAATTACCACAGAGGACCTAATTATTTGGAGATTGATGTAGATATGGGGAGCTCAGCGTTAGCCAGTGCGATTTTGCATCTCGCGCTTGGATACGTTACCAACGTAACAGTAGATATGGGGTTTCTGGTGGAGGGGCAGACGGAGGAGGAGTTGCCGGAAAGGCTGTTTGGCGCCGTCCGGATTTGCCAGATGGAGATGTCGTCGGCGACTATAGTAGACGCGCCGACACTGGCGCGTGGATTATCATGTGCCAAGGTGAATCACCACAAACCTGGCGACGACGACAACTGA Coding sequence (CDS) ATGGTGGATTGGATTTCCGAGACGATCAACGGCGGATCCCTACGCCTTGTCGACCTTCAGACGGGGATAAATGGTTGGGCCTCGCCGCCGGGGGACCTCTTTGCTCTCCGTTCCAAGAACTACTTGGCGAAACGGCAAAAATCTCCGTCTGGAGATTACCTGCTTTCTCCCGCCGGTGTTGATTGGCTGAAATCTAGTACCAAGCTTGACAACGTCCTTGCTCGCCCTGACAATCGCGTCGCGCAAGCGTTGAGGAGAGCGCAAGCCGTCGGTAAGTCGATGAAGAGTTTCATTATTGCGGTTAACATTCAAGTACCTGGGAAGGATCAGTACAGTGCCGTGTTCTACTTTGCTACTGAAGATCCGATTCCATCTGGCTCGCTTCTTCACCGTTTCATTAATGGCGATGATTTATTCAGAAATCAACGGTTGAAATTGGTGAATCGGATCGTGAAAGGGCCATGGATTGTTAAGAAAGCAGTAGGAAATTACAGTGCGTGTTTGTTAGGGAAGGCATTGACGTGCAATTACCACAGAGGACCTAATTATTTGGAGATTGATGTAGATATGGGGAGCTCAGCGTTAGCCAGTGCGATTTTGCATCTCGCGCTTGGATACGTTACCAACGTAACAGTAGATATGGGGTTTCTGGTGGAGGGGCAGACGGAGGAGGAGTTGCCGGAAAGGCTGTTTGGCGCCGTCCGGATTTGCCAGATGGAGATGTCGTCGGCGACTATAGTAGACGCGCCGACACTGGCGCGTGGATTATCATGTGCCAAGGTGAATCACCACAAACCTGGCGACGACGACAACTGA Protein sequence MVDWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHRFINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATIVDAPTLARGLSCAKVNHHKPGDDDN
Homology
BLAST of CmaCh05G003400 vs. ExPASy Swiss-Prot
Match: Q8VZF6 (Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana OX=3702 GN=EDR2L PE=2 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.9e-54 Identity = 108/235 (45.96%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 12 GSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDN 71 G+LR D + N W G+ F +R K++ ++K P+G +L+ VDW K + ++D+ Sbjct: 489 GNLRHDDNENARNCWRISDGNNFKVRGKSFCDDKRKIPAGKHLMDLVAVDWFKDTKRMDH 548
Query: 72 VLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHR 131 V+ R A V F VN+QVPG YS VFYF T++ +P GSL R Sbjct: 549 VVRRKG--------CAAQVAAEKGLFSTVVNVQVPGSTHYSMVFYFVTKELVP-GSLFQR 608
Query: 132 FINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMG 191 F++GDD FRN RLKL+ + KG WIV+++VG+ + CLLGKA+ CNY RGP YLEIDVD+G Sbjct: 609 FVDGDDEFRNSRLKLIPLVPKGSWIVRQSVGS-TPCLLGKAVDCNYIRGPTYLEIDVDIG 668
Query: 192 SSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATI 247 SS +A+ +L L +G +T++ V+M FLV+ T EELPERL GAVR+ +E+SSA + Sbjct: 669 SSTVANGVLGLVIGVITSLVVEMAFLVQANTPEELPERLIGAVRVSHVELSSAIV 713
BLAST of CmaCh05G003400 vs. ExPASy Swiss-Prot
Match: F4JSE7 (Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=EDR2 PE=2 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 5.5e-54 Identity = 109/235 (46.38%), Postives = 154/235 (65.53%), Query Frame = 0 Query: 12 GSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDN 71 G+L+ + + N W G+ F +R KN+ +++K P+G +L+ VDW K S ++D+ Sbjct: 488 GNLKRNENENARNCWRISDGNNFKVRGKNFGQEKRKIPAGKHLMDLVAVDWFKDSKRIDH 547
Query: 72 VLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHR 131 V AR AQ V F + VN+QVPG YS VFYF ++ +P GSLL R Sbjct: 548 V-ARRKGCAAQ-------VAAEKGLFSMVVNVQVPGSTHYSMVFYFVMKELVP-GSLLQR 607
Query: 132 FINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMG 191 F++GDD FRN RLKL+ + KG WIV+++VG+ + CLLGKA+ CNY RGP YLEIDVD+G Sbjct: 608 FVDGDDEFRNSRLKLIPLVPKGSWIVRQSVGS-TPCLLGKAVDCNYIRGPTYLEIDVDIG 667
Query: 192 SSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATI 247 SS +A+ +L L +G +T++ V+M FLV+ T EE PERL GAVR+ +E+SSA + Sbjct: 668 SSTVANGVLGLVIGVITSLVVEMAFLVQANTAEEQPERLIGAVRVSHIELSSAIV 712
BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G10750.1 (Protein of unknown function (DUF1336) ) HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-120 Identity = 206/273 (75.46%), Postives = 237/273 (86.81%), Query Frame = 0 Query: 3 DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDW 62 +WI+E+ NGGSLR VD TG +GWASPPGD+F+LRS +YL+K+QK+P+GDYLLSPAG+DW Sbjct: 30 EWITESTNGGSLRRVDPDTGTDGWASPPGDVFSLRSDSYLSKKQKTPAGDYLLSPAGMDW 89
Query: 63 LKSSTKLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDP 122 LKSSTKL+N LARPDNRVA ALR+AQ+ G+S+KSFI AVN+Q+PGKD +SAVFYFATE+P Sbjct: 90 LKSSTKLENALARPDNRVAHALRKAQSRGQSLKSFIFAVNLQIPGKDHHSAVFYFATEEP 149
Query: 123 IPSGSLLHRFINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPN 182 IPSGSLLHRFINGDD FRNQR K+VNRIVKGPW+VK AVGNYSACLLGKALTCNYHRGPN Sbjct: 150 IPSGSLLHRFINGDDAFRNQRFKIVNRIVKGPWVVKAAVGNYSACLLGKALTCNYHRGPN 209
Query: 183 YLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMS 242 Y EIDVD+ SSA+A+AIL LALGYVT+VT+DMGFL E QTEEELPERL GAVR+CQMEMS Sbjct: 210 YFEIDVDISSSAIATAILRLALGYVTSVTIDMGFLAEAQTEEELPERLIGAVRVCQMEMS 269
Query: 243 SATIVDAP-------TLARGLSCAKVNHHKPGD 269 SA +VDAP R LS AKVNH + D Sbjct: 270 SAFVVDAPPPQQLPSQPCRTLSSAKVNHDEDED 302
BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G25010.1 (Protein of unknown function (DUF1336) ) HSP 1 Score: 316.6 bits (810), Expect = 1.9e-86 Identity = 154/263 (58.56%), Postives = 191/263 (72.62%), Query Frame = 0 Query: 3 DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDW 62 +WI+ETINGGS VDL+TG NGWASPPG++F+LRS NY +QKSP GDYLLS VDW Sbjct: 27 EWITETINGGSFHHVDLETGTNGWASPPGNVFSLRSNNYFTTKQKSPGGDYLLSLIAVDW 86
Query: 63 LKSST-KLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATED 122 LKS+T KLD++L RPDNRV AL +Q+ +SFI AVN Q+PGK+ Y V YFATE Sbjct: 87 LKSTTKKLDHILCRPDNRVIHALETSQS-----RSFIFAVNFQIPGKEHYHLVLYFATEK 146
Query: 123 PIPSGSLLHRFIN-GDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRG 182 PIPS S+LH+FIN DD FRN+R K+V +VKGPW+VK G A L GK + C+Y+RG Sbjct: 147 PIPSDSILHKFINIDDDSFRNERFKVVTNVVKGPWVVKATAGKLGAFLAGKVVKCSYYRG 206
Query: 183 PNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQME 242 NY E+DVD SA+ SA++ L LGYVTN+ D+GF+VE QTEEELPERL G R+C ME Sbjct: 207 ANYFEVDVDFSISAIYSALVRLTLGYVTNLVADVGFVVEAQTEEELPERLIGGGRVCYME 266
Query: 243 MSSATIVDAPTLARGLSCAKVNH 264 +SSA +VD + + A+ NH Sbjct: 267 LSSAFLVDD---GKKMGAAEGNH 281
BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G24990.1 (Protein of unknown function (DUF1336) ) HSP 1 Score: 316.2 bits (809), Expect = 2.5e-86 Identity = 153/249 (61.45%), Postives = 193/249 (77.51%), Query Frame = 0 Query: 3 DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYL-AKRQKSPSGDYLLSPAGVD 62 +WI+ETINGGS VDL+TG NGWASPPG++F+LRS NY A +QKSP GDYLLS A VD Sbjct: 27 EWITETINGGSFCHVDLETGTNGWASPPGNVFSLRSHNYFTATKQKSPGGDYLLSLAAVD 86
Query: 63 WLKSST-KLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATE 122 WLKS+T KLD++L+RPDNRV A + +Q+ +SFI AVN QVPGK+ Y+ VFYFAT+ Sbjct: 87 WLKSTTKKLDHILSRPDNRVIHAFKTSQS-----RSFIFAVNFQVPGKEHYNLVFYFATQ 146
Query: 123 DPIPSGSLLHRFINGD-DLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHR 182 PIPS SLLH+FIN D D FRN+R K+V+ +VKGPW+VK A G + A + GKA+ C Y+R Sbjct: 147 KPIPSDSLLHKFINTDEDSFRNERFKIVSNVVKGPWVVKAAAGKFGAFVAGKAMKCTYYR 206
Query: 183 GPNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQM 242 G NY E+DVD+ SSA+ +A++ LGYVT + VD+GF+VE QT EELPERL G RIC M Sbjct: 207 GDNYFEVDVDISSSAIMTALIRFMLGYVTYLMVDIGFVVEAQTAEELPERLIGGARICHM 266
Query: 243 EMSSATIVD 249 E+SS+ +VD Sbjct: 267 ELSSSFLVD 270
BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G25020.1 (Protein of unknown function (DUF1336) ) HSP 1 Score: 263.5 bits (672), Expect = 1.9e-70 Identity = 133/247 (53.85%), Postives = 168/247 (68.02%), Query Frame = 0 Query: 3 DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLA-KRQKSPSGDYLLSPAGVD 62 +WI+ETINGGS VDL+TG NGWASPPG++F+LRS NY +QKSP GDYLLS A VD Sbjct: 28 EWITETINGGSFCHVDLETGTNGWASPPGNVFSLRSNNYFTPTKQKSPGGDYLLSLAAVD 87
Query: 63 WLKSST-KLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATE 122 WLKS+T KLD++L+RPDNRV AL+ +Q+ SFI AVN QVPGK+ Y Sbjct: 88 WLKSTTKKLDHILSRPDNRVIHALKTSQS-----SSFIFAVNFQVPGKEHY--------- 147
Query: 123 DPIPSGSLLHRFINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRG 182 N R K+V+ +VKGPW+VK A G + A + GKA+ C+YHRG Sbjct: 148 --------------------NLRFKIVSNVVKGPWVVKAAAGKFGAFVAGKAMKCSYHRG 207
Query: 183 PNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQME 242 NY E+DVD+ SSA+ +A++ LGYVT + VD+GF+VE QTEEELPERL G RIC ME Sbjct: 208 DNYFEVDVDISSSAIMTALIRFMLGYVTYLMVDIGFVVEAQTEEELPERLIGGARICHME 240
Query: 243 MSSATIV 248 +SSA ++ Sbjct: 268 LSSAFVI 240
BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT1G06050.1 (Protein of unknown function (DUF1336) ) HSP 1 Score: 246.5 bits (628), Expect = 2.4e-65 Identity = 114/225 (50.67%), Postives = 156/225 (69.33%), Query Frame = 0 Query: 24 NGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDNVLARPDNRVAQA 83 NGW +P D F +R Y + + K P+GD+LL P G DW+K KL +L+ P +R+ + Sbjct: 34 NGWTTPSPDTFMVRGPKYFSDKVKIPAGDFLLKPLGFDWIKGPKKLSEILSYPSSRIRKV 93
Query: 84 LRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHRFINGDDLFRNQR 143 + + K F+ A N+Q+P KD YSAV YF T +PI GSL+ RF+ GDD F+ R Sbjct: 94 IDE-EFQKDGTKPFVWAFNLQLPHKDNYSAVAYFVTTEPILEGSLMDRFLKGDDGFKKSR 153
Query: 144 LKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMGSSALASAILHLA 203 LKL+ IVKGPWIV+KAVG + C++G+AL+C Y G N++EIDVD+GSS +ASAI+HLA Sbjct: 154 LKLIANIVKGPWIVRKAVGEQAICVIGRALSCKYVSGENFVEIDVDIGSSMVASAIVHLA 213
Query: 204 LGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATIVD 249 GYVT +TVD+ FL+E QTE ELPE+L GAVR +++ SAT ++ Sbjct: 214 FGYVTTLTVDLAFLIESQTEAELPEKLLGAVRFSELQTESATSIE 257
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8VZF6 | 1.9e-54 | 45.96 | Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana OX=3702 GN=ED... | [more] |
F4JSE7 | 5.5e-54 | 46.38 | Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=EDR2 PE... | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR009769 | Protein ENHANCED DISEASE RESISTANCE 2, C-terminal | PFAM | PF07059 | DUF1336 | coord: 26..240 e-value: 2.2E-73 score: 246.8 |
None | No IPR available | PANTHER | PTHR12136:SF91 | PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKE | coord: 3..251 |
IPR045096 | Protein ENHANCED DISEASE RESISTANCE 2-like | PANTHER | PTHR12136 | ENHANCED DISEASE RESISTANCE-RELATED | coord: 3..251 |
Relationships
The following mRNA feature(s) are a part of this gene:
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