CmaCh05G003400 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G003400
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein ENHANCED DISEASE RESISTANCE 2-like
LocationCma_Chr05: 1488732 .. 1489547 (+)
RNA-Seq ExpressionCmaCh05G003400
SyntenyCmaCh05G003400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGATTGGATTTCCGAGACGATCAACGGCGGATCCCTACGCCTTGTCGACCTTCAGACGGGGATAAATGGTTGGGCCTCGCCGCCGGGGGACCTCTTTGCTCTCCGTTCCAAGAACTACTTGGCGAAACGGCAAAAATCTCCGTCTGGAGATTACCTGCTTTCTCCCGCCGGTGTTGATTGGCTGAAATCTAGTACCAAGCTTGACAACGTCCTTGCTCGCCCTGACAATCGCGTCGCGCAAGCGTTGAGGAGAGCGCAAGCCGTCGGTAAGTCGATGAAGAGTTTCATTATTGCGGTTAACATTCAAGTACCTGGGAAGGATCAGTACAGTGCCGTGTTCTACTTTGCTACTGAAGATCCGATTCCATCTGGCTCGCTTCTTCACCGTTTCATTAATGGCGATGATTTATTCAGAAATCAACGGTTGAAATTGGTGAATCGGATCGTGAAAGGGCCATGGATTGTTAAGAAAGCAGTAGGAAATTACAGTGCGTGTTTGTTAGGGAAGGCATTGACGTGCAATTACCACAGAGGACCTAATTATTTGGAGATTGATGTAGATATGGGGAGCTCAGCGTTAGCCAGTGCGATTTTGCATCTCGCGCTTGGATACGTTACCAACGTAACAGTAGATATGGGGTTTCTGGTGGAGGGGCAGACGGAGGAGGAGTTGCCGGAAAGGCTGTTTGGCGCCGTCCGGATTTGCCAGATGGAGATGTCGTCGGCGACTATAGTAGACGCGCCGACACTGGCGCGTGGATTATCATGTGCCAAGGTGAATCACCACAAACCTGGCGACGACGACAACTGA

mRNA sequence

ATGGTGGATTGGATTTCCGAGACGATCAACGGCGGATCCCTACGCCTTGTCGACCTTCAGACGGGGATAAATGGTTGGGCCTCGCCGCCGGGGGACCTCTTTGCTCTCCGTTCCAAGAACTACTTGGCGAAACGGCAAAAATCTCCGTCTGGAGATTACCTGCTTTCTCCCGCCGGTGTTGATTGGCTGAAATCTAGTACCAAGCTTGACAACGTCCTTGCTCGCCCTGACAATCGCGTCGCGCAAGCGTTGAGGAGAGCGCAAGCCGTCGGTAAGTCGATGAAGAGTTTCATTATTGCGGTTAACATTCAAGTACCTGGGAAGGATCAGTACAGTGCCGTGTTCTACTTTGCTACTGAAGATCCGATTCCATCTGGCTCGCTTCTTCACCGTTTCATTAATGGCGATGATTTATTCAGAAATCAACGGTTGAAATTGGTGAATCGGATCGTGAAAGGGCCATGGATTGTTAAGAAAGCAGTAGGAAATTACAGTGCGTGTTTGTTAGGGAAGGCATTGACGTGCAATTACCACAGAGGACCTAATTATTTGGAGATTGATGTAGATATGGGGAGCTCAGCGTTAGCCAGTGCGATTTTGCATCTCGCGCTTGGATACGTTACCAACGTAACAGTAGATATGGGGTTTCTGGTGGAGGGGCAGACGGAGGAGGAGTTGCCGGAAAGGCTGTTTGGCGCCGTCCGGATTTGCCAGATGGAGATGTCGTCGGCGACTATAGTAGACGCGCCGACACTGGCGCGTGGATTATCATGTGCCAAGGTGAATCACCACAAACCTGGCGACGACGACAACTGA

Coding sequence (CDS)

ATGGTGGATTGGATTTCCGAGACGATCAACGGCGGATCCCTACGCCTTGTCGACCTTCAGACGGGGATAAATGGTTGGGCCTCGCCGCCGGGGGACCTCTTTGCTCTCCGTTCCAAGAACTACTTGGCGAAACGGCAAAAATCTCCGTCTGGAGATTACCTGCTTTCTCCCGCCGGTGTTGATTGGCTGAAATCTAGTACCAAGCTTGACAACGTCCTTGCTCGCCCTGACAATCGCGTCGCGCAAGCGTTGAGGAGAGCGCAAGCCGTCGGTAAGTCGATGAAGAGTTTCATTATTGCGGTTAACATTCAAGTACCTGGGAAGGATCAGTACAGTGCCGTGTTCTACTTTGCTACTGAAGATCCGATTCCATCTGGCTCGCTTCTTCACCGTTTCATTAATGGCGATGATTTATTCAGAAATCAACGGTTGAAATTGGTGAATCGGATCGTGAAAGGGCCATGGATTGTTAAGAAAGCAGTAGGAAATTACAGTGCGTGTTTGTTAGGGAAGGCATTGACGTGCAATTACCACAGAGGACCTAATTATTTGGAGATTGATGTAGATATGGGGAGCTCAGCGTTAGCCAGTGCGATTTTGCATCTCGCGCTTGGATACGTTACCAACGTAACAGTAGATATGGGGTTTCTGGTGGAGGGGCAGACGGAGGAGGAGTTGCCGGAAAGGCTGTTTGGCGCCGTCCGGATTTGCCAGATGGAGATGTCGTCGGCGACTATAGTAGACGCGCCGACACTGGCGCGTGGATTATCATGTGCCAAGGTGAATCACCACAAACCTGGCGACGACGACAACTGA

Protein sequence

MVDWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHRFINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATIVDAPTLARGLSCAKVNHHKPGDDDN
Homology
BLAST of CmaCh05G003400 vs. ExPASy Swiss-Prot
Match: Q8VZF6 (Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana OX=3702 GN=EDR2L PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.9e-54
Identity = 108/235 (45.96%), Postives = 152/235 (64.68%), Query Frame = 0

Query: 12  GSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDN 71
           G+LR  D +   N W    G+ F +R K++   ++K P+G +L+    VDW K + ++D+
Sbjct: 489 GNLRHDDNENARNCWRISDGNNFKVRGKSFCDDKRKIPAGKHLMDLVAVDWFKDTKRMDH 548

Query: 72  VLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHR 131
           V+ R           A  V      F   VN+QVPG   YS VFYF T++ +P GSL  R
Sbjct: 549 VVRRKG--------CAAQVAAEKGLFSTVVNVQVPGSTHYSMVFYFVTKELVP-GSLFQR 608

Query: 132 FINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMG 191
           F++GDD FRN RLKL+  + KG WIV+++VG+ + CLLGKA+ CNY RGP YLEIDVD+G
Sbjct: 609 FVDGDDEFRNSRLKLIPLVPKGSWIVRQSVGS-TPCLLGKAVDCNYIRGPTYLEIDVDIG 668

Query: 192 SSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATI 247
           SS +A+ +L L +G +T++ V+M FLV+  T EELPERL GAVR+  +E+SSA +
Sbjct: 669 SSTVANGVLGLVIGVITSLVVEMAFLVQANTPEELPERLIGAVRVSHVELSSAIV 713

BLAST of CmaCh05G003400 vs. ExPASy Swiss-Prot
Match: F4JSE7 (Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=EDR2 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.5e-54
Identity = 109/235 (46.38%), Postives = 154/235 (65.53%), Query Frame = 0

Query: 12  GSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDN 71
           G+L+  + +   N W    G+ F +R KN+  +++K P+G +L+    VDW K S ++D+
Sbjct: 488 GNLKRNENENARNCWRISDGNNFKVRGKNFGQEKRKIPAGKHLMDLVAVDWFKDSKRIDH 547

Query: 72  VLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHR 131
           V AR     AQ       V      F + VN+QVPG   YS VFYF  ++ +P GSLL R
Sbjct: 548 V-ARRKGCAAQ-------VAAEKGLFSMVVNVQVPGSTHYSMVFYFVMKELVP-GSLLQR 607

Query: 132 FINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMG 191
           F++GDD FRN RLKL+  + KG WIV+++VG+ + CLLGKA+ CNY RGP YLEIDVD+G
Sbjct: 608 FVDGDDEFRNSRLKLIPLVPKGSWIVRQSVGS-TPCLLGKAVDCNYIRGPTYLEIDVDIG 667

Query: 192 SSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATI 247
           SS +A+ +L L +G +T++ V+M FLV+  T EE PERL GAVR+  +E+SSA +
Sbjct: 668 SSTVANGVLGLVIGVITSLVVEMAFLVQANTAEEQPERLIGAVRVSHIELSSAIV 712

BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G10750.1 (Protein of unknown function (DUF1336) )

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-120
Identity = 206/273 (75.46%), Postives = 237/273 (86.81%), Query Frame = 0

Query: 3   DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDW 62
           +WI+E+ NGGSLR VD  TG +GWASPPGD+F+LRS +YL+K+QK+P+GDYLLSPAG+DW
Sbjct: 30  EWITESTNGGSLRRVDPDTGTDGWASPPGDVFSLRSDSYLSKKQKTPAGDYLLSPAGMDW 89

Query: 63  LKSSTKLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDP 122
           LKSSTKL+N LARPDNRVA ALR+AQ+ G+S+KSFI AVN+Q+PGKD +SAVFYFATE+P
Sbjct: 90  LKSSTKLENALARPDNRVAHALRKAQSRGQSLKSFIFAVNLQIPGKDHHSAVFYFATEEP 149

Query: 123 IPSGSLLHRFINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPN 182
           IPSGSLLHRFINGDD FRNQR K+VNRIVKGPW+VK AVGNYSACLLGKALTCNYHRGPN
Sbjct: 150 IPSGSLLHRFINGDDAFRNQRFKIVNRIVKGPWVVKAAVGNYSACLLGKALTCNYHRGPN 209

Query: 183 YLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMS 242
           Y EIDVD+ SSA+A+AIL LALGYVT+VT+DMGFL E QTEEELPERL GAVR+CQMEMS
Sbjct: 210 YFEIDVDISSSAIATAILRLALGYVTSVTIDMGFLAEAQTEEELPERLIGAVRVCQMEMS 269

Query: 243 SATIVDAP-------TLARGLSCAKVNHHKPGD 269
           SA +VDAP          R LS AKVNH +  D
Sbjct: 270 SAFVVDAPPPQQLPSQPCRTLSSAKVNHDEDED 302

BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G25010.1 (Protein of unknown function (DUF1336) )

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-86
Identity = 154/263 (58.56%), Postives = 191/263 (72.62%), Query Frame = 0

Query: 3   DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDW 62
           +WI+ETINGGS   VDL+TG NGWASPPG++F+LRS NY   +QKSP GDYLLS   VDW
Sbjct: 27  EWITETINGGSFHHVDLETGTNGWASPPGNVFSLRSNNYFTTKQKSPGGDYLLSLIAVDW 86

Query: 63  LKSST-KLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATED 122
           LKS+T KLD++L RPDNRV  AL  +Q+     +SFI AVN Q+PGK+ Y  V YFATE 
Sbjct: 87  LKSTTKKLDHILCRPDNRVIHALETSQS-----RSFIFAVNFQIPGKEHYHLVLYFATEK 146

Query: 123 PIPSGSLLHRFIN-GDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRG 182
           PIPS S+LH+FIN  DD FRN+R K+V  +VKGPW+VK   G   A L GK + C+Y+RG
Sbjct: 147 PIPSDSILHKFINIDDDSFRNERFKVVTNVVKGPWVVKATAGKLGAFLAGKVVKCSYYRG 206

Query: 183 PNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQME 242
            NY E+DVD   SA+ SA++ L LGYVTN+  D+GF+VE QTEEELPERL G  R+C ME
Sbjct: 207 ANYFEVDVDFSISAIYSALVRLTLGYVTNLVADVGFVVEAQTEEELPERLIGGGRVCYME 266

Query: 243 MSSATIVDAPTLARGLSCAKVNH 264
           +SSA +VD     + +  A+ NH
Sbjct: 267 LSSAFLVDD---GKKMGAAEGNH 281

BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G24990.1 (Protein of unknown function (DUF1336) )

HSP 1 Score: 316.2 bits (809), Expect = 2.5e-86
Identity = 153/249 (61.45%), Postives = 193/249 (77.51%), Query Frame = 0

Query: 3   DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYL-AKRQKSPSGDYLLSPAGVD 62
           +WI+ETINGGS   VDL+TG NGWASPPG++F+LRS NY  A +QKSP GDYLLS A VD
Sbjct: 27  EWITETINGGSFCHVDLETGTNGWASPPGNVFSLRSHNYFTATKQKSPGGDYLLSLAAVD 86

Query: 63  WLKSST-KLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATE 122
           WLKS+T KLD++L+RPDNRV  A + +Q+     +SFI AVN QVPGK+ Y+ VFYFAT+
Sbjct: 87  WLKSTTKKLDHILSRPDNRVIHAFKTSQS-----RSFIFAVNFQVPGKEHYNLVFYFATQ 146

Query: 123 DPIPSGSLLHRFINGD-DLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHR 182
            PIPS SLLH+FIN D D FRN+R K+V+ +VKGPW+VK A G + A + GKA+ C Y+R
Sbjct: 147 KPIPSDSLLHKFINTDEDSFRNERFKIVSNVVKGPWVVKAAAGKFGAFVAGKAMKCTYYR 206

Query: 183 GPNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQM 242
           G NY E+DVD+ SSA+ +A++   LGYVT + VD+GF+VE QT EELPERL G  RIC M
Sbjct: 207 GDNYFEVDVDISSSAIMTALIRFMLGYVTYLMVDIGFVVEAQTAEELPERLIGGARICHM 266

Query: 243 EMSSATIVD 249
           E+SS+ +VD
Sbjct: 267 ELSSSFLVD 270

BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT5G25020.1 (Protein of unknown function (DUF1336) )

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-70
Identity = 133/247 (53.85%), Postives = 168/247 (68.02%), Query Frame = 0

Query: 3   DWISETINGGSLRLVDLQTGINGWASPPGDLFALRSKNYLA-KRQKSPSGDYLLSPAGVD 62
           +WI+ETINGGS   VDL+TG NGWASPPG++F+LRS NY    +QKSP GDYLLS A VD
Sbjct: 28  EWITETINGGSFCHVDLETGTNGWASPPGNVFSLRSNNYFTPTKQKSPGGDYLLSLAAVD 87

Query: 63  WLKSST-KLDNVLARPDNRVAQALRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATE 122
           WLKS+T KLD++L+RPDNRV  AL+ +Q+      SFI AVN QVPGK+ Y         
Sbjct: 88  WLKSTTKKLDHILSRPDNRVIHALKTSQS-----SSFIFAVNFQVPGKEHY--------- 147

Query: 123 DPIPSGSLLHRFINGDDLFRNQRLKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRG 182
                               N R K+V+ +VKGPW+VK A G + A + GKA+ C+YHRG
Sbjct: 148 --------------------NLRFKIVSNVVKGPWVVKAAAGKFGAFVAGKAMKCSYHRG 207

Query: 183 PNYLEIDVDMGSSALASAILHLALGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQME 242
            NY E+DVD+ SSA+ +A++   LGYVT + VD+GF+VE QTEEELPERL G  RIC ME
Sbjct: 208 DNYFEVDVDISSSAIMTALIRFMLGYVTYLMVDIGFVVEAQTEEELPERLIGGARICHME 240

Query: 243 MSSATIV 248
           +SSA ++
Sbjct: 268 LSSAFVI 240

BLAST of CmaCh05G003400 vs. TAIR 10
Match: AT1G06050.1 (Protein of unknown function (DUF1336) )

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-65
Identity = 114/225 (50.67%), Postives = 156/225 (69.33%), Query Frame = 0

Query: 24  NGWASPPGDLFALRSKNYLAKRQKSPSGDYLLSPAGVDWLKSSTKLDNVLARPDNRVAQA 83
           NGW +P  D F +R   Y + + K P+GD+LL P G DW+K   KL  +L+ P +R+ + 
Sbjct: 34  NGWTTPSPDTFMVRGPKYFSDKVKIPAGDFLLKPLGFDWIKGPKKLSEILSYPSSRIRKV 93

Query: 84  LRRAQAVGKSMKSFIIAVNIQVPGKDQYSAVFYFATEDPIPSGSLLHRFINGDDLFRNQR 143
           +   +      K F+ A N+Q+P KD YSAV YF T +PI  GSL+ RF+ GDD F+  R
Sbjct: 94  IDE-EFQKDGTKPFVWAFNLQLPHKDNYSAVAYFVTTEPILEGSLMDRFLKGDDGFKKSR 153

Query: 144 LKLVNRIVKGPWIVKKAVGNYSACLLGKALTCNYHRGPNYLEIDVDMGSSALASAILHLA 203
           LKL+  IVKGPWIV+KAVG  + C++G+AL+C Y  G N++EIDVD+GSS +ASAI+HLA
Sbjct: 154 LKLIANIVKGPWIVRKAVGEQAICVIGRALSCKYVSGENFVEIDVDIGSSMVASAIVHLA 213

Query: 204 LGYVTNVTVDMGFLVEGQTEEELPERLFGAVRICQMEMSSATIVD 249
            GYVT +TVD+ FL+E QTE ELPE+L GAVR  +++  SAT ++
Sbjct: 214 FGYVTTLTVDLAFLIESQTEAELPEKLLGAVRFSELQTESATSIE 257

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8VZF61.9e-5445.96Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana OX=3702 GN=ED... [more]
F4JSE75.5e-5446.38Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=EDR2 PE... [more]
Match NameE-valueIdentityDescription
AT5G10750.11.6e-12075.46Protein of unknown function (DUF1336) [more]
AT5G25010.11.9e-8658.56Protein of unknown function (DUF1336) [more]
AT5G24990.12.5e-8661.45Protein of unknown function (DUF1336) [more]
AT5G25020.11.9e-7053.85Protein of unknown function (DUF1336) [more]
AT1G06050.12.4e-6550.67Protein of unknown function (DUF1336) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009769Protein ENHANCED DISEASE RESISTANCE 2, C-terminalPFAMPF07059DUF1336coord: 26..240
e-value: 2.2E-73
score: 246.8
NoneNo IPR availablePANTHERPTHR12136:SF91PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKEcoord: 3..251
IPR045096Protein ENHANCED DISEASE RESISTANCE 2-likePANTHERPTHR12136ENHANCED DISEASE RESISTANCE-RELATEDcoord: 3..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G003400.1CmaCh05G003400.1mRNA