Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAACTGGCGATTCCTTGCCAAACAAAGCCTCCAATTTCCGTCCCCGCTTCAATTATCAAAACCAAACCCCTTAAATTCTCCTCAAAACCAACTCAAACTACTATATTTTTCACCCAGAAAACCAGTTCAAAGTCCAATGACGACCATTTGAGTTACCTTTGCCGCCATGGCCTCCTCCGAGAAGCCATAGCAGCCATTGATTCAATGTCCAGACATGGGTCTAAGTTAAGCACTAACACGTATATCAATTTGCTTCAAACTTGCATAGATGCGGATTCTATTGAAGTGGGTCGTGAGCTTCATGTTCGTCTCTGTTTAGTTGATCAGGTGAACCCATTTGTCGAGACGAAGCTAGTAAGCATGTATGCGAAATGTGGGTTTCTAAAAGATGCACGTAAGGTGTTTGATGAAATGCTGGAGAGAAATTTGTACACTTGGTCGGCAATGATAGGCGGATATTCAAGAGAGCAGAGATGGACAGAAGTAGTTGAACTTTTCTTTTTGATGATGGGTGATGGAGTACTGCCTGATGCTTTTCTTTTCCCAAGAATACTACAAGCTTGTGGGAATTGCGAGGATCTTGAAACTTTGAAGTTGATGCATTCTGTGGTTATTCGATGTGGGTTGAGCTGTTCTATGCGTGTAAGCAATTCTATTTTGACGGCATTGGTTAAATGTGGGAACTTGAGTTTGGCTAGGAAGTTCTTTGAGAACATGGACGAAAGAGATGAGGTCTCTTGGAATGCTATAATAGCTGGCTATTGCCGGAAGGGACATGGCGATGAAGCTAGGACTTTGCTCGACACGATGAACGATCAAGGATTCAAACCGGGTTTGGTTACTTGTAACATACTGATTGCTAGTTATAGCCAGTTGGGGAAATGTAATCTTGTTATAGAACTGAAGAAGAAGATGGAAAGTATGGGGATCACTCCTGATGTCTATACTTGGACTTCGATGATTTCGGGTTTTGCTCAAAGCAGCAGGATTAATCTGGCATTGGATTTCTTCAAGGAGATGATTCTAGCAGGGGTTGAACCAAATGCTGTAACTATTACGAGCGTGTCGTCGGCGTGTGCTTCCTTAAAATCGCTGCAAAAAGGACTGGAAATACATTGTTTAGCTATTAAAATGGGAATTGCTCATCAAGTATTGGTTGGGAATTCACTTATTGATATGTATTCTAAATGTGGAAAATTGGAAGCTGCTCATCATGTCTTTGATACAATTTTAGAAAAAGATATTTATACGTGGAACTCGATGATTGGAGGATATTGTCAGGGTGGATACTGTGGTAAAGCTTATGAACTTTTTATGAGAATAAGGGAATCAAATGTAATGCCTAATGTTGTGACATGGAATGTGATGATATCAGGGTGTATACACAATGGAGATGAGGATCAAGCTATGAACCTCTTTCAAATGATGGAAAATGATGGGGAGGTTAATCCGAATACGGCGTCCTGGAATTCTCTGATTGCAGGGTACCATCGGCTCGGTGAAAAGAACAAAGCTCTAGCAATATTTCGACAAATGCAGTCTCTTAATTTTAATCCTAATTCAGTGACTATCTTGAGTATCTTACCAGTTTGTGCAAATGTAATGGCAGAGAAGAAAATAAAGGAAATCCATGGCTGTGTGTTGCGTAGAAACCTGGAAACGGAGCTTCCTGTTGCGAACTCGCTTATAGACACGTATGCCAAGTCGGGGAACATTCAATATTCAAGAAACATCTTTGATGGCATGTTGTCGAAAGATATTATCACCTGGAATTCAATTATTGCAGGATATACTTTACATGGTTGCTCAGATGCTGCATTTCATTTGTTTGATCAGATGAAAAGGTTTGGAATTAGGCCGAACCGAGGTACACTGGCTAGTATTATGTATGCCTGTGGCATTGCTGGGATGGTCGACAGGGGACGACATGTTTTTTCTAGCATCACTGAAGAACATCAAATTCTGCCAACTTTAGATCATTATTCGGCTATGGTTGATCTTTATGGACGTTCTGGAAGGCTTACCGATGCAATCGAGTTCATCGAAAACATGCCTACAGAACCTGATGTCTCCATCTGGACCAGTCTACTGACTGCCTCGAGGTTTCATGGGAACTTACACTTGGCAGTACGAGCAGCTGAGCGCCTACTTGAATTGGAGCCTGATAATCATGTGATTTACCGTTTATTAATACAGGCATATGCTTTATATGGGAAATCTGAACAAGCTTTAAAAGTGAGAAAGCTTGGAAGAGAGAGTGCAATGAAGAAATGTACAGCACAGTGCTGGGTTGAAGTCGGTAACAAAGTCTATTTTTTCGTCAATGACGATCATTCCAAAGTCGACGTTCTAAATACTTGGATACAAGGCATTGTAGGGAAAGTAAAGAAATTTAATAATCACCATCAGCTTTCTATCGATGACGAACCGAAGGAAGAAAAAATTGGCGGGTTCCACTGTGAAAAGTTTGCATTTGCTTTTGGCCTTATTGGGTCGTCTCACAAACCGAAAAGAATAAAAATCGTGAAAAACTTGAGAATATGTGGAGACTGTCATCAGATGGCCAAGTATGTCTCAGAGGCTCATGGATGTGAAATATATCTAAGTGACTCAAAATGCCTGCACCATTTCAAAAATGGCTGTTGTTCTTGTGGGGATTATTGGTAG
mRNA sequence
ATGGAGAAACTGGCGATTCCTTGCCAAACAAAGCCTCCAATTTCCGTCCCCGCTTCAATTATCAAAACCAAACCCCTTAAATTCTCCTCAAAACCAACTCAAACTACTATATTTTTCACCCAGAAAACCAGTTCAAAGTCCAATGACGACCATTTGAGTTACCTTTGCCGCCATGGCCTCCTCCGAGAAGCCATAGCAGCCATTGATTCAATGTCCAGACATGGGTCTAAGTTAAGCACTAACACGTATATCAATTTGCTTCAAACTTGCATAGATGCGGATTCTATTGAAGTGGGTCGTGAGCTTCATGTTCGTCTCTGTTTAGTTGATCAGGTGAACCCATTTGTCGAGACGAAGCTAGTAAGCATGTATGCGAAATGTGGGTTTCTAAAAGATGCACGTAAGGTGTTTGATGAAATGCTGGAGAGAAATTTGTACACTTGGTCGGCAATGATAGGCGGATATTCAAGAGAGCAGAGATGGACAGAAGTAGTTGAACTTTTCTTTTTGATGATGGGTGATGGAGTACTGCCTGATGCTTTTCTTTTCCCAAGAATACTACAAGCTTGTGGGAATTGCGAGGATCTTGAAACTTTGAAGTTGATGCATTCTGTGGTTATTCGATGTGGGTTGAGCTGTTCTATGCGTGTAAGCAATTCTATTTTGACGGCATTGGTTAAATGTGGGAACTTGAGTTTGGCTAGGAAGTTCTTTGAGAACATGGACGAAAGAGATGAGGTCTCTTGGAATGCTATAATAGCTGGCTATTGCCGGAAGGGACATGGCGATGAAGCTAGGACTTTGCTCGACACGATGAACGATCAAGGATTCAAACCGGGTTTGGTTACTTGTAACATACTGATTGCTAGTTATAGCCAGTTGGGGAAATGTAATCTTGTTATAGAACTGAAGAAGAAGATGGAAAGTATGGGGATCACTCCTGATGTCTATACTTGGACTTCGATGATTTCGGGTTTTGCTCAAAGCAGCAGGATTAATCTGGCATTGGATTTCTTCAAGGAGATGATTCTAGCAGGGGTTGAACCAAATGCTGTAACTATTACGAGCGTGTCGTCGGCGTGTGCTTCCTTAAAATCGCTGCAAAAAGGACTGGAAATACATTGTTTAGCTATTAAAATGGGAATTGCTCATCAAGTATTGGTTGGGAATTCACTTATTGATATGTATTCTAAATGTGGAAAATTGGAAGCTGCTCATCATGTCTTTGATACAATTTTAGAAAAAGATATTTATACGTGGAACTCGATGATTGGAGGATATTGTCAGGGTGGATACTGTGGTAAAGCTTATGAACTTTTTATGAGAATAAGGGAATCAAATGTAATGCCTAATGTTGTGACATGGAATGTGATGATATCAGGGTGTATACACAATGGAGATGAGGATCAAGCTATGAACCTCTTTCAAATGATGGAAAATGATGGGGAGGTTAATCCGAATACGGCGTCCTGGAATTCTCTGATTGCAGGGTACCATCGGCTCGGTGAAAAGAACAAAGCTCTAGCAATATTTCGACAAATGCAGTCTCTTAATTTTAATCCTAATTCAGTGACTATCTTGAGTATCTTACCAGTTTGTGCAAATGTAATGGCAGAGAAGAAAATAAAGGAAATCCATGGCTGTGTGTTGCGTAGAAACCTGGAAACGGAGCTTCCTGTTGCGAACTCGCTTATAGACACGTATGCCAAGTCGGGGAACATTCAATATTCAAGAAACATCTTTGATGGCATGTTGTCGAAAGATATTATCACCTGGAATTCAATTATTGCAGGATATACTTTACATGGTTGCTCAGATGCTGCATTTCATTTGTTTGATCAGATGAAAAGGTTTGGAATTAGGCCGAACCGAGGTACACTGGCTAGTATTATGTATGCCTGTGGCATTGCTGGGATGGTCGACAGGGGACGACATGTTTTTTCTAGCATCACTGAAGAACATCAAATTCTGCCAACTTTAGATCATTATTCGGCTATGGTTGATCTTTATGGACGTTCTGGAAGGCTTACCGATGCAATCGAGTTCATCGAAAACATGCCTACAGAACCTGATGTCTCCATCTGGACCAGTCTACTGACTGCCTCGAGGTTTCATGGGAACTTACACTTGGCAGTACGAGCAGCTGAGCGCCTACTTGAATTGGAGCCTGATAATCATGTGATTTACCGTTTATTAATACAGGCATATGCTTTATATGGGAAATCTGAACAAGCTTTAAAAGTGAGAAAGCTTGGAAGAGAGAGTGCAATGAAGAAATGTACAGCACAGTGCTGGGTTGAAGTCGGTAACAAAGTCTATTTTTTCGTCAATGACGATCATTCCAAAGTCGACGTTCTAAATACTTGGATACAAGGCATTGTAGGGAAAGTAAAGAAATTTAATAATCACCATCAGCTTTCTATCGATGACGAACCGAAGGAAGAAAAAATTGGCGGGTTCCACTGTGAAAAGTTTGCATTTGCTTTTGGCCTTATTGGGTCGTCTCACAAACCGAAAAGAATAAAAATCGTGAAAAACTTGAGAATATGTGGAGACTGTCATCAGATGGCCAAGTATGTCTCAGAGGCTCATGGATGTGAAATATATCTAAGTGACTCAAAATGCCTGCACCATTTCAAAAATGGCTGTTGTTCTTGTGGGGATTATTGGTAG
Coding sequence (CDS)
ATGGAGAAACTGGCGATTCCTTGCCAAACAAAGCCTCCAATTTCCGTCCCCGCTTCAATTATCAAAACCAAACCCCTTAAATTCTCCTCAAAACCAACTCAAACTACTATATTTTTCACCCAGAAAACCAGTTCAAAGTCCAATGACGACCATTTGAGTTACCTTTGCCGCCATGGCCTCCTCCGAGAAGCCATAGCAGCCATTGATTCAATGTCCAGACATGGGTCTAAGTTAAGCACTAACACGTATATCAATTTGCTTCAAACTTGCATAGATGCGGATTCTATTGAAGTGGGTCGTGAGCTTCATGTTCGTCTCTGTTTAGTTGATCAGGTGAACCCATTTGTCGAGACGAAGCTAGTAAGCATGTATGCGAAATGTGGGTTTCTAAAAGATGCACGTAAGGTGTTTGATGAAATGCTGGAGAGAAATTTGTACACTTGGTCGGCAATGATAGGCGGATATTCAAGAGAGCAGAGATGGACAGAAGTAGTTGAACTTTTCTTTTTGATGATGGGTGATGGAGTACTGCCTGATGCTTTTCTTTTCCCAAGAATACTACAAGCTTGTGGGAATTGCGAGGATCTTGAAACTTTGAAGTTGATGCATTCTGTGGTTATTCGATGTGGGTTGAGCTGTTCTATGCGTGTAAGCAATTCTATTTTGACGGCATTGGTTAAATGTGGGAACTTGAGTTTGGCTAGGAAGTTCTTTGAGAACATGGACGAAAGAGATGAGGTCTCTTGGAATGCTATAATAGCTGGCTATTGCCGGAAGGGACATGGCGATGAAGCTAGGACTTTGCTCGACACGATGAACGATCAAGGATTCAAACCGGGTTTGGTTACTTGTAACATACTGATTGCTAGTTATAGCCAGTTGGGGAAATGTAATCTTGTTATAGAACTGAAGAAGAAGATGGAAAGTATGGGGATCACTCCTGATGTCTATACTTGGACTTCGATGATTTCGGGTTTTGCTCAAAGCAGCAGGATTAATCTGGCATTGGATTTCTTCAAGGAGATGATTCTAGCAGGGGTTGAACCAAATGCTGTAACTATTACGAGCGTGTCGTCGGCGTGTGCTTCCTTAAAATCGCTGCAAAAAGGACTGGAAATACATTGTTTAGCTATTAAAATGGGAATTGCTCATCAAGTATTGGTTGGGAATTCACTTATTGATATGTATTCTAAATGTGGAAAATTGGAAGCTGCTCATCATGTCTTTGATACAATTTTAGAAAAAGATATTTATACGTGGAACTCGATGATTGGAGGATATTGTCAGGGTGGATACTGTGGTAAAGCTTATGAACTTTTTATGAGAATAAGGGAATCAAATGTAATGCCTAATGTTGTGACATGGAATGTGATGATATCAGGGTGTATACACAATGGAGATGAGGATCAAGCTATGAACCTCTTTCAAATGATGGAAAATGATGGGGAGGTTAATCCGAATACGGCGTCCTGGAATTCTCTGATTGCAGGGTACCATCGGCTCGGTGAAAAGAACAAAGCTCTAGCAATATTTCGACAAATGCAGTCTCTTAATTTTAATCCTAATTCAGTGACTATCTTGAGTATCTTACCAGTTTGTGCAAATGTAATGGCAGAGAAGAAAATAAAGGAAATCCATGGCTGTGTGTTGCGTAGAAACCTGGAAACGGAGCTTCCTGTTGCGAACTCGCTTATAGACACGTATGCCAAGTCGGGGAACATTCAATATTCAAGAAACATCTTTGATGGCATGTTGTCGAAAGATATTATCACCTGGAATTCAATTATTGCAGGATATACTTTACATGGTTGCTCAGATGCTGCATTTCATTTGTTTGATCAGATGAAAAGGTTTGGAATTAGGCCGAACCGAGGTACACTGGCTAGTATTATGTATGCCTGTGGCATTGCTGGGATGGTCGACAGGGGACGACATGTTTTTTCTAGCATCACTGAAGAACATCAAATTCTGCCAACTTTAGATCATTATTCGGCTATGGTTGATCTTTATGGACGTTCTGGAAGGCTTACCGATGCAATCGAGTTCATCGAAAACATGCCTACAGAACCTGATGTCTCCATCTGGACCAGTCTACTGACTGCCTCGAGGTTTCATGGGAACTTACACTTGGCAGTACGAGCAGCTGAGCGCCTACTTGAATTGGAGCCTGATAATCATGTGATTTACCGTTTATTAATACAGGCATATGCTTTATATGGGAAATCTGAACAAGCTTTAAAAGTGAGAAAGCTTGGAAGAGAGAGTGCAATGAAGAAATGTACAGCACAGTGCTGGGTTGAAGTCGGTAACAAAGTCTATTTTTTCGTCAATGACGATCATTCCAAAGTCGACGTTCTAAATACTTGGATACAAGGCATTGTAGGGAAAGTAAAGAAATTTAATAATCACCATCAGCTTTCTATCGATGACGAACCGAAGGAAGAAAAAATTGGCGGGTTCCACTGTGAAAAGTTTGCATTTGCTTTTGGCCTTATTGGGTCGTCTCACAAACCGAAAAGAATAAAAATCGTGAAAAACTTGAGAATATGTGGAGACTGTCATCAGATGGCCAAGTATGTCTCAGAGGCTCATGGATGTGAAATATATCTAAGTGACTCAAAATGCCTGCACCATTTCAAAAATGGCTGTTGTTCTTGTGGGGATTATTGGTAG
Protein sequence
MEKLAIPCQTKPPISVPASIIKTKPLKFSSKPTQTTIFFTQKTSSKSNDDHLSYLCRHGLLREAIAAIDSMSRHGSKLSTNTYINLLQTCIDADSIEVGRELHVRLCLVDQVNPFVETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGGYSREQRWTEVVELFFLMMGDGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCSMRVSNSILTALVKCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEARTLLDTMNDQGFKPGLVTCNILIASYSQLGKCNLVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEPNAVTITSVSSACASLKSLQKGLEIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHVFDTILEKDIYTWNSMIGGYCQGGYCGKAYELFMRIRESNVMPNVVTWNVMISGCIHNGDEDQAMNLFQMMENDGEVNPNTASWNSLIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMAEKKIKEIHGCVLRRNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTLHGCSDAAFHLFDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLDHYSAMVDLYGRSGRLTDAIEFIENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERLLELEPDNHVIYRLLIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVNDDHSKVDVLNTWIQGIVGKVKKFNNHHQLSIDDEPKEEKIGGFHCEKFAFAFGLIGSSHKPKRIKIVKNLRICGDCHQMAKYVSEAHGCEIYLSDSKCLHHFKNGCCSCGDYW
Homology
BLAST of CmaCh05G002710 vs. ExPASy Swiss-Prot
Match:
Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)
HSP 1 Score: 963.0 bits (2488), Expect = 2.4e-279
Identity = 485/900 (53.89%), Postives = 628/900 (69.78%), Query Frame = 0
Query: 1 MEKLAIPCQTKPPIS--VPASIIKTKPLKFSSKPTQTTIFFTQKTSSKSNDDHLSYLCRH 60
MEKL +P K ++ PA + + L S+ + F +K + D+ YLCR+
Sbjct: 1 MEKLFVPSFPKTFLNYQTPAKVENSPELHPKSRKKNLS-FTKKKEPNIIPDEQFDYLCRN 60
Query: 61 GLLREAIAAIDSMSRHGSKLSTNTYINLLQTCIDADSIEVGRELHVRLCLVDQVNPFVET 120
G L EA A+DS+ + GSK+ +TY+ LL++CID+ SI +GR LH R L + + FVET
Sbjct: 61 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVET 120
Query: 121 KLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGGYSREQRWTEVVELFFLMMGDGVLP 180
KL+SMYAKCG + DARKVFD M ERNL+TWSAMIG YSRE RW EV +LF LMM DGVLP
Sbjct: 121 KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP 180
Query: 181 DAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCSMRVSNSILTALVKCGNLSLARKFF 240
D FLFP+ILQ C NC D+E K++HSVVI+ G+S +RVSNSIL KCG L A KFF
Sbjct: 181 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 240
Query: 241 ENMDERDEVSWNAIIAGYCRKGHGDEARTLLDTMNDQGFKPGLVTCNILIASYSQLGKCN 300
M ERD ++WN+++ YC+ G +EA L+ M +G PGLVT NILI Y+QLGKC+
Sbjct: 241 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 300
Query: 301 LVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEPNAVTITSVS 360
++L +KME+ GIT DV+TWT+MISG + ALD F++M LAGV PNAVTI S
Sbjct: 301 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 360
Query: 361 SACASLKSLQKGLEIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHVFDTILEKDIY 420
SAC+ LK + +G E+H +A+KMG VLVGNSL+DMYSKCGKLE A VFD++ KD+Y
Sbjct: 361 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 420
Query: 421 TWNSMIGGYCQGGYCGKAYELFMRIRESNVMPNVVTWNVMISGCIHNGDEDQAMNLFQMM 480
TWNSMI GYCQ GYCGKAYELF R++++N+ PN++TWN MISG I NGDE +AM+LFQ M
Sbjct: 421 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 480
Query: 481 ENDGEVNPNTASWNSLIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMA 540
E DG+V NTA+WN +IAGY + G+K++AL +FR+MQ F PNSVTILS+LP CAN++
Sbjct: 481 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 540
Query: 541 EKKIKEIHGCVLRRNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAG 600
K ++EIHGCVLRRNL+ V N+L DTYAKSG+I+YSR IF GM +KDIITWNS+I G
Sbjct: 541 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGG 600
Query: 601 YTLHGCSDAAFHLFDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILP 660
Y LHG A LF+QMK GI PNRGTL+SI+ A G+ G VD G+ VF SI ++ I+P
Sbjct: 601 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP 660
Query: 661 TLDHYSAMVDLYGRSGRLTDAIEFIENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERL 720
L+H SAMV LYGR+ RL +A++FI+ M + + IW S LT R HG++ +A+ AAE L
Sbjct: 661 ALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENL 720
Query: 721 LELEPDNHVIYRLLIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVND 780
LEP+N ++ Q YAL K ++L+ K R++ +KK Q W+EV N ++ F
Sbjct: 721 FSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTG 780
Query: 781 DHSKV--DVLNTWIQGIVGKVKKFNN-----HHQLSIDDEPKEEKIGGFHCEKFAFAFGL 840
D SK+ DVL +V K+ + +N + +L I++E +EE G H EKFA AFGL
Sbjct: 781 DQSKLCTDVL----YPLVEKMSRLDNRSDQYNGELWIEEEGREETC-GIHSEKFAMAFGL 840
Query: 841 IGSSHKPK-RIKIVKNLRICGDCHQMAKYVSEAHGCEIYLSDSKCLHHFKNGCCSCGDYW 891
I SS K I+I+KNLR+C DCH AKYVS+ +GC+I L D++CLHHFKNG CSC DYW
Sbjct: 841 ISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
BLAST of CmaCh05G002710 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 451.1 bits (1159), Expect = 3.0e-125
Identity = 280/914 (30.63%), Postives = 457/914 (50.00%), Query Frame = 0
Query: 56 CRHGLLREAIAAIDSMSRHGSKLSTNTYINLLQTCIDADSIEVGRELHVRL--CLVDQVN 115
C G+L EA +D +S + S + Y+ L+ C ++ GR+LH R+
Sbjct: 59 CFDGVLTEAFQRLD-VSENNSPVEAFAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFEL 118
Query: 116 PFVETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGGYSREQRWTEVVELFFLMMG 175
F+ KLV MY KCG L DA KVFDEM +R + W+ MIG Y + L++ M
Sbjct: 119 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 178
Query: 176 DGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCSMRVSNSILTALVKCGNLSL 235
+GV FP +L+AC D+ + +HS++++ G + + N++++ K +LS
Sbjct: 179 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 238
Query: 236 ARKFFENMDER-DEVSWNAIIAGYCRKGHGDEARTLLDTMNDQGFKPG------------ 295
AR+ F+ E+ D V WN+I++ Y G E L M+ G P
Sbjct: 239 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 298
Query: 296 ------------------------LVTCNILIASYSQLGKCNLVIELKKKMESMGITPDV 355
L CN LIA Y++ GK + ++M + DV
Sbjct: 299 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN----ADV 358
Query: 356 YTWTSMISGFAQSSRINLALDFFKEMILAGVEPNAVTITSVSSACASLKSLQKGLEIHCL 415
TW S+I G+ Q+ AL+FF +MI AG + + V++TS+ +A L +L G+E+H
Sbjct: 359 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 418
Query: 416 AIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHVFDTILEKDIYTWNSMIGGYCQGGYCGKA 475
IK G + VGN+LIDMYSKC F + +KD+ +W ++I GY Q +A
Sbjct: 419 VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA 478
Query: 476 YELFMRI----------------RESNVMPNV-----VTWNVMISGCIHNGDEDQAMNLF 535
ELF + R S+V+ ++ + +++ G + +++ ++++
Sbjct: 479 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVY 538
Query: 536 QMMENDGEV--------NPNTASWNSLIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTIL 595
N G + SW S+I+ G +++A+ +FR+M + +SV +L
Sbjct: 539 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 598
Query: 596 SILPVCANVMAEKKIKEIHGCVLRRNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSK 655
IL A++ A K +EIH +LR+ E +A +++D YA G++Q ++ +FD + K
Sbjct: 599 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 658
Query: 656 DIITWNSIIAGYTLHGCSDAAFHLFDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVF 715
++ + S+I Y +HGC AA LFD+M+ + P+ + +++YAC AG++D GR
Sbjct: 659 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 718
Query: 716 SSITEEHQILPTLDHYSAMVDLYGRSGRLTDAIEFIENMPTEPDVSIWTSLLTASRFHGN 775
+ E+++ P +HY +VD+ GR+ + +A EF++ M TEP +W +LL A R H
Sbjct: 719 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 778
Query: 776 LHLAVRAAERLLELEPDNHVIYRLLIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVE 835
+ AA+RLLELEP N L+ +A G+ KVR + S M+K W+E
Sbjct: 779 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 838
Query: 836 VGNKVYFFVNDDHS---------KVDVLNTWIQGIVGKV--KKFNNHHQLSIDDEPKEEK 891
+ KV+ F D S K+ + ++ VG V KF H ++D+ K +
Sbjct: 839 MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLH---NVDEGEKVQM 898
BLAST of CmaCh05G002710 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 438.0 bits (1125), Expect = 2.6e-121
Identity = 283/947 (29.88%), Postives = 459/947 (48.47%), Query Frame = 0
Query: 43 TSSKSNDDH----LSYLCRHGLLREAIAAI------DSMSRHGSKLSTNTYINLLQTCID 102
+S+ +N +H +S C G L ++ + D S L LLQ
Sbjct: 37 SSNSTNANHFLRRISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGK 96
Query: 103 ADSIEVGRELHVRLCLVDQV--NPFVETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSA 162
IE+GR++H + ++ + + T++++MYA CG D+R VFD + +NL+ W+A
Sbjct: 97 RKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 156
Query: 163 MIGGYSREQRWTEVVELFFLMMG-DGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRC 222
+I YSR + + EV+E F M+ +LPD F +P +++AC D+ +H +V++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 223 GLSCSMRVSNSILTALVKCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEARTLL 282
GL + V N++++ G ++ A + F+ M ER+ VSWN++I + G +E+ LL
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 283 DTM----NDQGFKPGLVTC-----------------------------------NILIAS 342
M D F P + T N L+
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 343 YSQLGKCNLVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAG--VE 402
YS+ G C ++ KM + +V +W +M+ GF+ + D ++M+ G V+
Sbjct: 337 YSKCG-CITNAQMIFKMNN---NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 396
Query: 403 PNAVTITSVSSACASLKSLQKGLEIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHV 462
+ VTI + C L E+HC ++K + LV N+ + Y+KCG L A V
Sbjct: 397 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 456
Query: 463 FDTILEKDIYTWNSMIGGYCQGGYCGKAYELFMRIRESNVMPNVVTWNVMISGC------ 522
F I K + +WN++IGG+ Q + + ++++ S ++P+ T ++S C
Sbjct: 457 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 516
Query: 523 -----------------------------IHNGDEDQAMNLFQMMENDGEVNPNTASWNS 582
IH G+ LF ME+ V SWN+
Sbjct: 517 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV-----SWNT 576
Query: 583 LIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMAEKKIKEIHGCVLRRN 642
+I GY + G ++AL +FRQM ++++ + C+ + + + +E H L+
Sbjct: 577 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 636
Query: 643 LETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTLHGCSDAAFHLFD 702
LE + +A SLID YAK+G+I S +F+G+ K +WN++I GY +HG + A LF+
Sbjct: 637 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 696
Query: 703 QMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLDHYSAMVDLYGRS 762
+M+R G P+ T ++ AC +G++ G + + P L HY+ ++D+ GR+
Sbjct: 697 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 756
Query: 763 GRLTDAIEFI-ENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERLLELEPDNHVIYRLL 822
G+L A+ + E M E DV IW SLL++ R H NL + + A +L ELEP+ Y LL
Sbjct: 757 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLL 816
Query: 823 IQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFV---------NDDHSKV 882
YA GK E KVR+ E +++K W+E+ KV+ FV + S
Sbjct: 817 SNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLW 876
Query: 883 DVLNTWIQGIVGKVKKFNNHHQLSIDDEPKEEKIGGFHCEKFAFAFGLIGSSHKPKRIKI 891
+L I + + + H LS +E K E++ G H EK A +GLI +S + I++
Sbjct: 877 SILEMKISKMGYRPDTMSVQHDLS--EEEKIEQLRG-HSEKLALTYGLIKTS-EGTTIRV 936
BLAST of CmaCh05G002710 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-121
Identity = 266/837 (31.78%), Postives = 429/837 (51.25%), Query Frame = 0
Query: 148 WSAMIGGYSREQRWTEVVELFFLMMGDGVLPDAFLFPRILQACGNCEDLETLKLMHSVVI 207
W ++ R E V + M+ G+ PD + FP +L+A + +D+E K +H+ V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 208 RCGLSC-SMRVSNSILTALVKCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEAR 267
+ G S+ V+N+++ KCG+ K F+ + ER++VSWN++I+ C + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 268 TLLDTMNDQGFKPGLVT-------------------------------------CNILIA 327
M D+ +P T N L+A
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 328 SYSQLGKCNLVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEP 387
Y +LGK + K + S G D+ TW +++S Q+ ++ AL++ +EM+L GVEP
Sbjct: 245 MYGKLGK---LASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 304
Query: 388 NAVTITSVSSACASLKSLQKGLEIHCLAIKMG-IAHQVLVGNSLIDMYSKCGKLEAAHHV 447
+ TI+SV AC+ L+ L+ G E+H A+K G + VG++L+DMY C ++ + V
Sbjct: 305 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 364
Query: 448 FDTILEKDIYTWNSMIGGYCQGGYCGKAYELFMRIRES-NVMPNVVTWNVMISGCIHNG- 507
FD + ++ I WN+MI GY Q + +A LF+ + ES ++ N T ++ C+ +G
Sbjct: 365 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 424
Query: 508 ----------------DEDQ------------------AMNLFQMMENDGEVNPNTASWN 567
D D+ AM +F ME + + +WN
Sbjct: 425 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-----DRDLVTWN 484
Query: 568 SLIAGYHRLGEKNKALAIFRQMQSL-----------NFNPNSVTILSILPVCANVMAEKK 627
++I GY AL + +MQ+L + PNS+T+++ILP CA + A K
Sbjct: 485 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 544
Query: 628 IKEIHGCVLRRNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTL 687
KEIH ++ NL T++ V ++L+D YAK G +Q SR +FD + K++ITWN II Y +
Sbjct: 545 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 604
Query: 688 HGCSDAAFHLFDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLD 747
HG A L M G++PN T S+ AC +GMVD G +F + ++ + P+ D
Sbjct: 605 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 664
Query: 748 HYSAMVDLYGRSGRLTDAIEFIENMPTE-PDVSIWTSLLTASRFHGNLHLAVRAAERLLE 807
HY+ +VDL GR+GR+ +A + + MP + W+SLL ASR H NL + AA+ L++
Sbjct: 665 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 724
Query: 808 LEPDNHVIYRLLIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVNDD- 867
LEP+ Y LL Y+ G ++A +VR+ +E ++K W+E G++V+ FV D
Sbjct: 725 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 784
Query: 868 -HSKVDVLNTWIQGIVGKVKKFNNHHQLS-----IDDEPKEEKIGGFHCEKFAFAFGLIG 891
H + + L+ +++ + +++K S ++++ KE + G H EK A AFG++
Sbjct: 785 SHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG-HSEKLAIAFGILN 844
BLAST of CmaCh05G002710 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 436.4 bits (1121), Expect = 7.7e-121
Identity = 266/888 (29.95%), Postives = 432/888 (48.65%), Query Frame = 0
Query: 52 LSYLCRHGLLREAIAAIDSMSRHGSKLSTNTYINLLQTCIDADSIEVGRELHVRLCLVDQ 111
L C G L A+ + + + T ++LQ C D+ S++ G+E+ + +
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKW--DIDPRTLCSVLQLCADSKSLKDGKEVDNFI----R 127
Query: 112 VNPFV-----ETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGGYSREQRWTEVVE 171
N FV +KL MY CG LK+A +VFDE+ W+ ++ ++ ++ +
Sbjct: 128 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIG 187
Query: 172 LFFLMMGDGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCSMRVSNSILTALV 231
LF MM GV D++ F + ++ + + + +H +++ G V NS++ +
Sbjct: 188 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 247
Query: 232 KCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEARTLLDTMNDQGFKPGLVT--- 291
K + ARK F+ M ERD +SWN+II GY G ++ ++ M G + L T
Sbjct: 248 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 307
Query: 292 --------------------------------CNILIASYSQLGKCNLVIELKKKMESMG 351
CN L+ YS+ G + + ++M
Sbjct: 308 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR- 367
Query: 352 ITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEPNAVTITSVSSACASLKSLQKGL 411
V ++TSMI+G+A+ A+ F+EM G+ P+ T+T+V + CA + L +G
Sbjct: 368 ---SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 427
Query: 412 EIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHVFDTILEKDIYTWNSMIGGYCQGG 471
+H + + + V N+L+DMY+KCG ++ A VF + KDI +WN++IGGY +
Sbjct: 428 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 487
Query: 472 YCGKAYELFMRIRESNVMPNVVTWNVMISGCIHNGDEDQAMNLFQMMENDGEVNPNTASW 531
Y ++A++LF ++
Sbjct: 488 YA-----------------------------------NEALSLFNLL------------- 547
Query: 532 NSLIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMAEKKIKEIHGCVLR 591
++ F+P+ T+ +LP CA++ A K +EIHG ++R
Sbjct: 548 ----------------------LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 607
Query: 592 RNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTLHGCSDAAFHL 651
++ VANSL+D YAK G + + +FD + SKD+++W +IAGY +HG A L
Sbjct: 608 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 667
Query: 652 FDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLDHYSAMVDLYG 711
F+QM++ GI + + S++YAC +G+VD G F+ + E +I PT++HY+ +VD+
Sbjct: 668 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 727
Query: 712 RSGRLTDAIEFIENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERLLELEPDNHVIYRL 771
R+G L A FIENMP PD +IW +LL R H ++ LA + AE++ ELEP+N Y L
Sbjct: 728 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 787
Query: 772 LIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVNDDHSKVDVLNTWIQ 831
+ YA K EQ ++RK + ++K W+E+ +V FV D S + N I+
Sbjct: 788 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN--IE 847
Query: 832 GIVGKVK---------KFNNHHQLSIDDEPKEEKIGGFHCEKFAFAFGLIGSSHKPKRIK 891
+ KV+ + + ++ KEE + G H EK A A G+I S H K I+
Sbjct: 848 AFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG-HSEKLAMALGIISSGH-GKIIR 871
BLAST of CmaCh05G002710 vs. TAIR 10
Match:
AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 963.0 bits (2488), Expect = 1.7e-280
Identity = 485/900 (53.89%), Postives = 628/900 (69.78%), Query Frame = 0
Query: 1 MEKLAIPCQTKPPIS--VPASIIKTKPLKFSSKPTQTTIFFTQKTSSKSNDDHLSYLCRH 60
MEKL +P K ++ PA + + L S+ + F +K + D+ YLCR+
Sbjct: 1 MEKLFVPSFPKTFLNYQTPAKVENSPELHPKSRKKNLS-FTKKKEPNIIPDEQFDYLCRN 60
Query: 61 GLLREAIAAIDSMSRHGSKLSTNTYINLLQTCIDADSIEVGRELHVRLCLVDQVNPFVET 120
G L EA A+DS+ + GSK+ +TY+ LL++CID+ SI +GR LH R L + + FVET
Sbjct: 61 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVET 120
Query: 121 KLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGGYSREQRWTEVVELFFLMMGDGVLP 180
KL+SMYAKCG + DARKVFD M ERNL+TWSAMIG YSRE RW EV +LF LMM DGVLP
Sbjct: 121 KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP 180
Query: 181 DAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCSMRVSNSILTALVKCGNLSLARKFF 240
D FLFP+ILQ C NC D+E K++HSVVI+ G+S +RVSNSIL KCG L A KFF
Sbjct: 181 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 240
Query: 241 ENMDERDEVSWNAIIAGYCRKGHGDEARTLLDTMNDQGFKPGLVTCNILIASYSQLGKCN 300
M ERD ++WN+++ YC+ G +EA L+ M +G PGLVT NILI Y+QLGKC+
Sbjct: 241 RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 300
Query: 301 LVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEPNAVTITSVS 360
++L +KME+ GIT DV+TWT+MISG + ALD F++M LAGV PNAVTI S
Sbjct: 301 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 360
Query: 361 SACASLKSLQKGLEIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHVFDTILEKDIY 420
SAC+ LK + +G E+H +A+KMG VLVGNSL+DMYSKCGKLE A VFD++ KD+Y
Sbjct: 361 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 420
Query: 421 TWNSMIGGYCQGGYCGKAYELFMRIRESNVMPNVVTWNVMISGCIHNGDEDQAMNLFQMM 480
TWNSMI GYCQ GYCGKAYELF R++++N+ PN++TWN MISG I NGDE +AM+LFQ M
Sbjct: 421 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 480
Query: 481 ENDGEVNPNTASWNSLIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMA 540
E DG+V NTA+WN +IAGY + G+K++AL +FR+MQ F PNSVTILS+LP CAN++
Sbjct: 481 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 540
Query: 541 EKKIKEIHGCVLRRNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAG 600
K ++EIHGCVLRRNL+ V N+L DTYAKSG+I+YSR IF GM +KDIITWNS+I G
Sbjct: 541 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGG 600
Query: 601 YTLHGCSDAAFHLFDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILP 660
Y LHG A LF+QMK GI PNRGTL+SI+ A G+ G VD G+ VF SI ++ I+P
Sbjct: 601 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP 660
Query: 661 TLDHYSAMVDLYGRSGRLTDAIEFIENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERL 720
L+H SAMV LYGR+ RL +A++FI+ M + + IW S LT R HG++ +A+ AAE L
Sbjct: 661 ALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENL 720
Query: 721 LELEPDNHVIYRLLIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVND 780
LEP+N ++ Q YAL K ++L+ K R++ +KK Q W+EV N ++ F
Sbjct: 721 FSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTG 780
Query: 781 DHSKV--DVLNTWIQGIVGKVKKFNN-----HHQLSIDDEPKEEKIGGFHCEKFAFAFGL 840
D SK+ DVL +V K+ + +N + +L I++E +EE G H EKFA AFGL
Sbjct: 781 DQSKLCTDVL----YPLVEKMSRLDNRSDQYNGELWIEEEGREETC-GIHSEKFAMAFGL 840
Query: 841 IGSSHKPK-RIKIVKNLRICGDCHQMAKYVSEAHGCEIYLSDSKCLHHFKNGCCSCGDYW 891
I SS K I+I+KNLR+C DCH AKYVS+ +GC+I L D++CLHHFKNG CSC DYW
Sbjct: 841 ISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
BLAST of CmaCh05G002710 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 438.0 bits (1125), Expect = 1.9e-122
Identity = 283/947 (29.88%), Postives = 459/947 (48.47%), Query Frame = 0
Query: 43 TSSKSNDDH----LSYLCRHGLLREAIAAI------DSMSRHGSKLSTNTYINLLQTCID 102
+S+ +N +H +S C G L ++ + D S L LLQ
Sbjct: 37 SSNSTNANHFLRRISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGK 96
Query: 103 ADSIEVGRELHVRLCLVDQV--NPFVETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSA 162
IE+GR++H + ++ + + T++++MYA CG D+R VFD + +NL+ W+A
Sbjct: 97 RKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 156
Query: 163 MIGGYSREQRWTEVVELFFLMMG-DGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRC 222
+I YSR + + EV+E F M+ +LPD F +P +++AC D+ +H +V++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 223 GLSCSMRVSNSILTALVKCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEARTLL 282
GL + V N++++ G ++ A + F+ M ER+ VSWN++I + G +E+ LL
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 283 DTM----NDQGFKPGLVTC-----------------------------------NILIAS 342
M D F P + T N L+
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 343 YSQLGKCNLVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAG--VE 402
YS+ G C ++ KM + +V +W +M+ GF+ + D ++M+ G V+
Sbjct: 337 YSKCG-CITNAQMIFKMNN---NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 396
Query: 403 PNAVTITSVSSACASLKSLQKGLEIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHV 462
+ VTI + C L E+HC ++K + LV N+ + Y+KCG L A V
Sbjct: 397 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 456
Query: 463 FDTILEKDIYTWNSMIGGYCQGGYCGKAYELFMRIRESNVMPNVVTWNVMISGC------ 522
F I K + +WN++IGG+ Q + + ++++ S ++P+ T ++S C
Sbjct: 457 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 516
Query: 523 -----------------------------IHNGDEDQAMNLFQMMENDGEVNPNTASWNS 582
IH G+ LF ME+ V SWN+
Sbjct: 517 RLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV-----SWNT 576
Query: 583 LIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMAEKKIKEIHGCVLRRN 642
+I GY + G ++AL +FRQM ++++ + C+ + + + +E H L+
Sbjct: 577 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 636
Query: 643 LETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTLHGCSDAAFHLFD 702
LE + +A SLID YAK+G+I S +F+G+ K +WN++I GY +HG + A LF+
Sbjct: 637 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 696
Query: 703 QMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLDHYSAMVDLYGRS 762
+M+R G P+ T ++ AC +G++ G + + P L HY+ ++D+ GR+
Sbjct: 697 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 756
Query: 763 GRLTDAIEFI-ENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERLLELEPDNHVIYRLL 822
G+L A+ + E M E DV IW SLL++ R H NL + + A +L ELEP+ Y LL
Sbjct: 757 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLL 816
Query: 823 IQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFV---------NDDHSKV 882
YA GK E KVR+ E +++K W+E+ KV+ FV + S
Sbjct: 817 SNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLW 876
Query: 883 DVLNTWIQGIVGKVKKFNNHHQLSIDDEPKEEKIGGFHCEKFAFAFGLIGSSHKPKRIKI 891
+L I + + + H LS +E K E++ G H EK A +GLI +S + I++
Sbjct: 877 SILEMKISKMGYRPDTMSVQHDLS--EEEKIEQLRG-HSEKLALTYGLIKTS-EGTTIRV 936
BLAST of CmaCh05G002710 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 437.2 bits (1123), Expect = 3.2e-122
Identity = 266/837 (31.78%), Postives = 429/837 (51.25%), Query Frame = 0
Query: 148 WSAMIGGYSREQRWTEVVELFFLMMGDGVLPDAFLFPRILQACGNCEDLETLKLMHSVVI 207
W ++ R E V + M+ G+ PD + FP +L+A + +D+E K +H+ V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 208 RCGLSC-SMRVSNSILTALVKCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEAR 267
+ G S+ V+N+++ KCG+ K F+ + ER++VSWN++I+ C + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 268 TLLDTMNDQGFKPGLVT-------------------------------------CNILIA 327
M D+ +P T N L+A
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 328 SYSQLGKCNLVIELKKKMESMGITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEP 387
Y +LGK + K + S G D+ TW +++S Q+ ++ AL++ +EM+L GVEP
Sbjct: 245 MYGKLGK---LASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 304
Query: 388 NAVTITSVSSACASLKSLQKGLEIHCLAIKMG-IAHQVLVGNSLIDMYSKCGKLEAAHHV 447
+ TI+SV AC+ L+ L+ G E+H A+K G + VG++L+DMY C ++ + V
Sbjct: 305 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 364
Query: 448 FDTILEKDIYTWNSMIGGYCQGGYCGKAYELFMRIRES-NVMPNVVTWNVMISGCIHNG- 507
FD + ++ I WN+MI GY Q + +A LF+ + ES ++ N T ++ C+ +G
Sbjct: 365 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 424
Query: 508 ----------------DEDQ------------------AMNLFQMMENDGEVNPNTASWN 567
D D+ AM +F ME + + +WN
Sbjct: 425 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-----DRDLVTWN 484
Query: 568 SLIAGYHRLGEKNKALAIFRQMQSL-----------NFNPNSVTILSILPVCANVMAEKK 627
++I GY AL + +MQ+L + PNS+T+++ILP CA + A K
Sbjct: 485 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 544
Query: 628 IKEIHGCVLRRNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTL 687
KEIH ++ NL T++ V ++L+D YAK G +Q SR +FD + K++ITWN II Y +
Sbjct: 545 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 604
Query: 688 HGCSDAAFHLFDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLD 747
HG A L M G++PN T S+ AC +GMVD G +F + ++ + P+ D
Sbjct: 605 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 664
Query: 748 HYSAMVDLYGRSGRLTDAIEFIENMPTE-PDVSIWTSLLTASRFHGNLHLAVRAAERLLE 807
HY+ +VDL GR+GR+ +A + + MP + W+SLL ASR H NL + AA+ L++
Sbjct: 665 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 724
Query: 808 LEPDNHVIYRLLIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVNDD- 867
LEP+ Y LL Y+ G ++A +VR+ +E ++K W+E G++V+ FV D
Sbjct: 725 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 784
Query: 868 -HSKVDVLNTWIQGIVGKVKKFNNHHQLS-----IDDEPKEEKIGGFHCEKFAFAFGLIG 891
H + + L+ +++ + +++K S ++++ KE + G H EK A AFG++
Sbjct: 785 SHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG-HSEKLAIAFGILN 844
BLAST of CmaCh05G002710 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 436.4 bits (1121), Expect = 5.4e-122
Identity = 266/888 (29.95%), Postives = 432/888 (48.65%), Query Frame = 0
Query: 52 LSYLCRHGLLREAIAAIDSMSRHGSKLSTNTYINLLQTCIDADSIEVGRELHVRLCLVDQ 111
L C G L A+ + + + T ++LQ C D+ S++ G+E+ + +
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKW--DIDPRTLCSVLQLCADSKSLKDGKEVDNFI----R 127
Query: 112 VNPFV-----ETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGGYSREQRWTEVVE 171
N FV +KL MY CG LK+A +VFDE+ W+ ++ ++ ++ +
Sbjct: 128 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIG 187
Query: 172 LFFLMMGDGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCSMRVSNSILTALV 231
LF MM GV D++ F + ++ + + + +H +++ G V NS++ +
Sbjct: 188 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 247
Query: 232 KCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEARTLLDTMNDQGFKPGLVT--- 291
K + ARK F+ M ERD +SWN+II GY G ++ ++ M G + L T
Sbjct: 248 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 307
Query: 292 --------------------------------CNILIASYSQLGKCNLVIELKKKMESMG 351
CN L+ YS+ G + + ++M
Sbjct: 308 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR- 367
Query: 352 ITPDVYTWTSMISGFAQSSRINLALDFFKEMILAGVEPNAVTITSVSSACASLKSLQKGL 411
V ++TSMI+G+A+ A+ F+EM G+ P+ T+T+V + CA + L +G
Sbjct: 368 ---SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 427
Query: 412 EIHCLAIKMGIAHQVLVGNSLIDMYSKCGKLEAAHHVFDTILEKDIYTWNSMIGGYCQGG 471
+H + + + V N+L+DMY+KCG ++ A VF + KDI +WN++IGGY +
Sbjct: 428 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 487
Query: 472 YCGKAYELFMRIRESNVMPNVVTWNVMISGCIHNGDEDQAMNLFQMMENDGEVNPNTASW 531
Y ++A++LF ++
Sbjct: 488 YA-----------------------------------NEALSLFNLL------------- 547
Query: 532 NSLIAGYHRLGEKNKALAIFRQMQSLNFNPNSVTILSILPVCANVMAEKKIKEIHGCVLR 591
++ F+P+ T+ +LP CA++ A K +EIHG ++R
Sbjct: 548 ----------------------LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 607
Query: 592 RNLETELPVANSLIDTYAKSGNIQYSRNIFDGMLSKDIITWNSIIAGYTLHGCSDAAFHL 651
++ VANSL+D YAK G + + +FD + SKD+++W +IAGY +HG A L
Sbjct: 608 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 667
Query: 652 FDQMKRFGIRPNRGTLASIMYACGIAGMVDRGRHVFSSITEEHQILPTLDHYSAMVDLYG 711
F+QM++ GI + + S++YAC +G+VD G F+ + E +I PT++HY+ +VD+
Sbjct: 668 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 727
Query: 712 RSGRLTDAIEFIENMPTEPDVSIWTSLLTASRFHGNLHLAVRAAERLLELEPDNHVIYRL 771
R+G L A FIENMP PD +IW +LL R H ++ LA + AE++ ELEP+N Y L
Sbjct: 728 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 787
Query: 772 LIQAYALYGKSEQALKVRKLGRESAMKKCTAQCWVEVGNKVYFFVNDDHSKVDVLNTWIQ 831
+ YA K EQ ++RK + ++K W+E+ +V FV D S + N I+
Sbjct: 788 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN--IE 847
Query: 832 GIVGKVK---------KFNNHHQLSIDDEPKEEKIGGFHCEKFAFAFGLIGSSHKPKRIK 891
+ KV+ + + ++ KEE + G H EK A A G+I S H K I+
Sbjct: 848 AFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCG-HSEKLAMALGIISSGH-GKIIR 871
BLAST of CmaCh05G002710 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 431.0 bits (1107), Expect = 2.3e-120
Identity = 273/865 (31.56%), Postives = 438/865 (50.64%), Query Frame = 0
Query: 52 LSYLCRHGLLREAIAAIDSMSRHGSKLSTNTYINLLQT-----CIDAD----SIEVGREL 111
L Y +GL R A + + H K +T T I QT C D+D ++ + +
Sbjct: 16 LHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYM 75
Query: 112 HVRLC--------LVDQVNPFVETKLVSMYAKCGFLKDARKVFDEMLERNLYTWSAMIGG 171
C + + + ++S Y + G + ARK+FDEM ER+L +W+ MI G
Sbjct: 76 RTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKG 135
Query: 172 YSREQRWTEVVELFFLMMGDGVLPDAFLFPRILQACGNCEDLETLKLMHSVVIRCGLSCS 231
Y R + + ELF +M V CS
Sbjct: 136 YVRNRNLGKARELFEIMPERDV------------------------------------CS 195
Query: 232 MRVSNSILTALVKCGNLSLARKFFENMDERDEVSWNAIIAGYCRKGHGDEARTLLDTMND 291
N++L+ + G + AR F+ M E+++VSWNA+++ Y + +EA L + +
Sbjct: 196 W---NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 255
Query: 292 QGFKPGLVTCNILIASYSQLGKCNLVIELKKKMESMGITPDVYTWTSMISGFAQSSRINL 351
LV+ N L+ + + K ++E ++ +SM + DV +W ++I+G+AQS +I+
Sbjct: 256 W----ALVSWNCLLGGFVKKKK---IVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDE 315
Query: 352 ALDFFKEMILAGVEPNAVTITSVSSACASLKSLQKGLEIHCLAIKMGIAHQVLVGNSLID 411
A F E V +++
Sbjct: 316 ARQLFDE---------------------------------------SPVQDVFTWTAMVS 375
Query: 412 MYSKCGKLEAAHHVFDTILEKDIYTWNSMIGGYCQGGYCGKAYELFMRIRESNVMP--NV 471
Y + +E A +FD + E++ +WN+M+ GY QG A ELF +VMP NV
Sbjct: 376 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF------DVMPCRNV 435
Query: 472 VTWNVMISGCIHNGDEDQAMNLFQMMENDGEVNPNTASWNSLIAGYHRLGEKNKALAIFR 531
TWN MI+G G +A NLF M V SW ++IAGY + G +AL +F
Sbjct: 436 STWNTMITGYAQCGKISEAKNLFDKMPKRDPV-----SWAAMIAGYSQSGHSFEALRLFV 495
Query: 532 QMQSLNFNPNSVTILSILPVCANVMAEKKIKEIHGCVLRRNLETELPVANSLIDTYAKSG 591
QM+ N + S L CA+V+A + K++HG +++ ET V N+L+ Y K G
Sbjct: 496 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 555
Query: 592 NIQYSRNIFDGMLSKDIITWNSIIAGYTLHGCSDAAFHLFDQMKRFGIRPNRGTLASIMY 651
+I+ + ++F M KDI++WN++IAGY+ HG + A F+ MKR G++P+ T+ +++
Sbjct: 556 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 615
Query: 652 ACGIAGMVDRGRHVFSSITEEHQILPTLDHYSAMVDLYGRSGRLTDAIEFIENMPTEPDV 711
AC G+VD+GR F ++T+++ ++P HY+ MVDL GR+G L DA ++NMP EPD
Sbjct: 616 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 675
Query: 712 SIWTSLLTASRFHGNLHLAVRAAERLLELEPDNHVIYRLLIQAYALYGKSEQALKVRKLG 771
+IW +LL ASR HGN LA AA+++ +EP+N +Y LL YA G+ K+R
Sbjct: 676 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 735
Query: 772 RESAMKKCTAQCWVEVGNKVY-FFVNDD-HSKVDVLNTWIQGIVGKVKKFNNHHQLSI-- 831
R+ +KK W+E+ NK + F V D+ H + D + +++ + ++KK + S+
Sbjct: 736 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL 781
Query: 832 --DDEPKEEKIGGFHCEKFAFAFGLIG-SSHKPKRIKIVKNLRICGDCHQMAKYVSEAHG 891
+E ++E++ +H E+ A A+G++ SS +P I+++KNLR+C DCH KY++ G
Sbjct: 796 HDVEEEEKERMVRYHSERLAVAYGIMRVSSGRP--IRVIKNLRVCEDCHNAIKYMARITG 781
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FXH1 | 2.4e-279 | 53.89 | Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... | [more] |
| Q9M1V3 | 3.0e-125 | 30.63 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
| Q0WN60 | 2.6e-121 | 29.88 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
| Q7Y211 | 4.5e-121 | 31.78 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
| Q9SN39 | 7.7e-121 | 29.95 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G19720.1 | 1.7e-280 | 53.89 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT1G18485.1 | 1.9e-122 | 29.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G57430.1 | 3.2e-122 | 31.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 5.4e-122 | 29.95 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G02750.1 | 2.3e-120 | 31.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
