CmaCh05G002660 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCTATTGACTCTTCTCTCTCATTGTTAAGCTTTCTACATCTCTGATCTTTCCACAAGCTCTGCTATCTTGGAGCAGCCATGGTGGTCTCCACGGGTCGAGATCCCGACGTAATAAACGTCGTCGTTTTGGGTGTAATAGCTTGGACATTGGCTTTCATTTCCTTGAGAAAACTCCTTCCAAAGAGATCCTTTGGGTTCTGCAACCGCCTCGTCTCCACGCTCCATGCTTGTTTGGCTGTCACCTTGGCTTCCATCTCTGTGCAGAATTGGCGATGCCCCATTTGTCCTCTCGCTTCTCAAGCTTCACCCTTTCAGGTACTTTCTTCTTCAAATCTTTGTACGACGCCGTTTTGTTGCTCTTAATGAATTAGATATGAAATGGGGTTTTTTTAAGCTGTTAAAAATGGTGGATTTGTTCGCCAGATGCAAACATTGGCTGTGACCTGTTCTTATTTGATCTATGATATGGTGTGTTGCCACTTTGACAAGAAAGTGAATGTGGACAATGCCATCCATCACTTGGTTAGCATTGTTGGAATTGCAGCTGGCTTTGCTTATCAAAAGGTACTCTTTTTTTTCTCGTTCAATAAATTAGGCTCGGTTTCAACTATTTATGCTTCGAAGAAGAGGAGAAATCTTCTTTTCTTAGCACGGGTGAGTTAACTATCATGGGTTTGGGTCAAGTTGGTTGAATCACCTACTTAAGATATGGTATCTTACGAGTTACATTGATGATTTCATCGTCGTGAACATGTAGTGTGGGTCAGAGATGGTAGCAGCGTTATGGATAACCGAGATCTCAAGCCCCTTTCTCCATTTAAGGGAAATTCTCAAAGAAATTGGTTACAGAGGCACAGACTTTAATTTGGCCGCTGATGTAAGTCATCGCCCCAATTGATCAAGATTATATGCTTAAATCTAAAAAAATATATTCTAATGAATATCAAACGAAACTTAAGCTAATATGATATTGATTCGATGACAGTTCGGATTTGCTGTGATATTTTCAATTGGAAGAATGGTTGGAGGGCCTTATCTCACCTACATGACTCTATCCGCCACCGCCGTCCCTCTTCTTATTAAGGTAGCAAACATCTAAATGCATATTCTCCATAAAATTTAGTCGTGAATAGATAAAATGTCAATGTCAATAGATATTTTAATAAAAATATCACGAGCTCATAAATAACGAGTTCTTTATGATCACAAGCTCGTAAATAACGAGTTCTTTATGATCATGAGCTCGTAAATACCTTTATCAACTACTTTGTTCAACTTTCACTAACCAAATAGTTCATATAATTCACAGGCCATGGCTCTAGGATTGCAGCTTGTCAGTGCCTACTGGTTTTACAAGATCGTGAGAATGGTCAGATTCAAACTCAACGACAGATCTACATCGAAGAACAGTTAATCTCAGCTAAGGAATCAACAAAAAGATAGAACTCTTACAATTTTATGTTCATCAAATCCCAGCAGTATCTTGGGAACAGTGACACTGCAAACAAAAACAGTGCAAGAACTTTGCAATGAACTGTGTATTCTGTAAACTGAGCTGCAGATGATCATGTTTAGATTAATGAAAATCACAATGAACCATTTCATCTCAGCTTTATATCTTTTCAATGAGCACATTAACAAGAAAGATTTAAGGCAGGGTGAATAAAAATCTGTTTAGGCCACAAGAACAGGGAATAAAATAAGGAAGAAAGAAGAATGGCTAGATTTTCATGAATGTTCATATCATCGTCTGTGATCAGATACAACAGGTTCCTAT ACCTATTGACTCTTCTCTCTCATTGTTAAGCTTTCTACATCTCTGATCTTTCCACAAGCTCTGCTATCTTGGAGCAGCCATGGTGGTCTCCACGGGTCGAGATCCCGACGTAATAAACGTCGTCGTTTTGGGTGTAATAGCTTGGACATTGGCTTTCATTTCCTTGAGAAAACTCCTTCCAAAGAGATCCTTTGGGTTCTGCAACCGCCTCGTCTCCACGCTCCATGCTTGTTTGGCTGTCACCTTGGCTTCCATCTCTGTGCAGAATTGGCGATGCCCCATTTGTCCTCTCGCTTCTCAAGCTTCACCCTTTCAGATGCAAACATTGGCTGTGACCTGTTCTTATTTGATCTATGATATGGTGTGTTGCCACTTTGACAAGAAAGTGAATGTGGACAATGCCATCCATCACTTGGTTAGCATTGTTGGAATTGCAGCTGGCTTTGCTTATCAAAAGTGTGGGTCAGAGATGGTAGCAGCGTTATGGATAACCGAGATCTCAAGCCCCTTTCTCCATTTAAGGGAAATTCTCAAAGAAATTGGTTACAGAGGCACAGACTTTAATTTGGCCGCTGATTTCGGATTTGCTGTGATATTTTCAATTGGAAGAATGGTTGGAGGGCCTTATCTCACCTACATGACTCTATCCGCCACCGCCGTCCCTCTTCTTATTAAGGCCATGGCTCTAGGATTGCAGCTTGTCAGTGCCTACTGGTTTTACAAGATCGTGAGAATGGTCAGATTCAAACTCAACGACAGATCTACATCGAAGAACAGTTAATCTCAGCTAAGGAATCAACAAAAAGATAGAACTCTTACAATTTTATGTTCATCAAATCCCAGCAGTATCTTGGGAACAGTGACACTGCAAACAAAAACAGTGCAAGAACTTTGCAATGAACTGTGTATTCTGTAAACTGAGCTGCAGATGATCATGTTTAGATTAATGAAAATCACAATGAACCATTTCATCTCAGCTTTATATCTTTTCAATGAGCACATTAACAAGAAAGATTTAAGGCAGGGTGAATAAAAATCTGTTTAGGCCACAAGAACAGGGAATAAAATAAGGAAGAAAGAAGAATGGCTAGATTTTCATGAATGTTCATATCATCGTCTGTGATCAGATACAACAGGTTCCTAT ATGGTGGTCTCCACGGGTCGAGATCCCGACGTAATAAACGTCGTCGTTTTGGGTGTAATAGCTTGGACATTGGCTTTCATTTCCTTGAGAAAACTCCTTCCAAAGAGATCCTTTGGGTTCTGCAACCGCCTCGTCTCCACGCTCCATGCTTGTTTGGCTGTCACCTTGGCTTCCATCTCTGTGCAGAATTGGCGATGCCCCATTTGTCCTCTCGCTTCTCAAGCTTCACCCTTTCAGATGCAAACATTGGCTGTGACCTGTTCTTATTTGATCTATGATATGGTGTGTTGCCACTTTGACAAGAAAGTGAATGTGGACAATGCCATCCATCACTTGGTTAGCATTGTTGGAATTGCAGCTGGCTTTGCTTATCAAAAGTGTGGGTCAGAGATGGTAGCAGCGTTATGGATAACCGAGATCTCAAGCCCCTTTCTCCATTTAAGGGAAATTCTCAAAGAAATTGGTTACAGAGGCACAGACTTTAATTTGGCCGCTGATTTCGGATTTGCTGTGATATTTTCAATTGGAAGAATGGTTGGAGGGCCTTATCTCACCTACATGACTCTATCCGCCACCGCCGTCCCTCTTCTTATTAAGGCCATGGCTCTAGGATTGCAGCTTGTCAGTGCCTACTGGTTTTACAAGATCGTGAGAATGGTCAGATTCAAACTCAACGACAGATCTACATCGAAGAACAGTTAA MVVSTGRDPDVINVVVLGVIAWTLAFISLRKLLPKRSFGFCNRLVSTLHACLAVTLASISVQNWRCPICPLASQASPFQMQTLAVTCSYLIYDMVCCHFDKKVNVDNAIHHLVSIVGIAAGFAYQKCGSEMVAALWITEISSPFLHLREILKEIGYRGTDFNLAADFGFAVIFSIGRMVGGPYLTYMTLSATAVPLLIKAMALGLQLVSAYWFYKIVRMVRFKLNDRSTSKNS Homology
BLAST of CmaCh05G002660 vs. ExPASy Swiss-Prot
Match: Q6ZRR5 (TLC domain-containing protein 5 OS=Homo sapiens OX=9606 GN=TLCD5 PE=2 SV=2) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12 Identity = 55/205 (26.83%), Postives = 96/205 (46.83%), Query Frame = 0
BLAST of CmaCh05G002660 vs. ExPASy Swiss-Prot
Match: Q0VD42 (TLC domain-containing protein 5 OS=Bos taurus OX=9913 GN=TLCD5 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12 Identity = 53/198 (26.77%), Postives = 94/198 (47.47%), Query Frame = 0
BLAST of CmaCh05G002660 vs. ExPASy Swiss-Prot
Match: Q3TYE7 (TLC domain-containing protein 5 OS=Mus musculus OX=10090 GN=Tlcd5 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 8.4e-11 Identity = 54/203 (26.60%), Postives = 94/203 (46.31%), Query Frame = 0
BLAST of CmaCh05G002660 vs. ExPASy Swiss-Prot
Match: Q1LXV8 (TLC domain-containing protein 5 OS=Danio rerio OX=7955 GN=tlcd5 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.4e-10 Identity = 52/201 (25.87%), Postives = 90/201 (44.78%), Query Frame = 0
BLAST of CmaCh05G002660 vs. TAIR 10
Match: AT1G35180.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 294.3 bits (752), Expect = 8.7e-80 Identity = 143/220 (65.00%), Postives = 179/220 (81.36%), Query Frame = 0
BLAST of CmaCh05G002660 vs. TAIR 10
Match: AT1G35170.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 270.8 bits (691), Expect = 1.0e-72 Identity = 133/220 (60.45%), Postives = 172/220 (78.18%), Query Frame = 0
BLAST of CmaCh05G002660 vs. TAIR 10
Match: AT1G45010.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 261.2 bits (666), Expect = 8.2e-70 Identity = 127/213 (59.62%), Postives = 163/213 (76.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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