CmaCh05G002610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G002610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclin-T1-3-like
Location	Cma_Chr05: 1102526 .. 1110061 (-)
RNA-Seq Expression	CmaCh05G002610
Synteny	CmaCh05G002610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTATCGATAGCTACGATTTTGGCGCGGCGGGTTGTGTGTTACATTCTACCCTCGAACATCCTCTGTGTTCGCCGCCAAGAATTTCATTGATCCATCAAGTAAAAGCGTTTGCGCGTTTGCGTGGTTTCGAAGCAACGAGTCAATTCAAGTCCAGTCCAATCTAGTGTTTCTGCAGCTGTTTTCTTCCTACGGTGGCCGGAAGTTAGGGTTTCCGGTGTAGCTTGAAGCTGCTCCGCTCCCAACCCGAATATTCGCTTCTCTTCTGGATATTCATCAGGTAATTCATCTTCCTTACCTAATTGTTACCCCTTTTTTGGTTCCTTGATTGCTTGCGGCGGCAACGATTTATGGGTTGTTTTAGGATTCGTGGAATGGGTTGTCTTATAGTGAGAATGGTTCGAATCTGAAATTTTGGGGGTTTTCACTTCAAGTTATTAGCTTGTAATTGGAGTATTTAGACGACCGTTTTTTTTTTTTTCTTTTTAAATTTGTTCGTATTTGTGATTCTTAATAGGACTTCAACGGTTACAATGTAGGGTTTTATATTTCTGTTTTGGTGGATTAGCTGACGTCTTTAGTTTTGGTTTTCTGCTTTTTAACAAAAACTTGTTTGGTATATTTGTCTAAGTTGGTTTTTCAATCATGTTTTGTAGAGGCAATGCTTTCCTTTCTAGTTTTTGGCTACTTAACGAGAAGTCTTGCGCCTTTCCATGAGTAGGAATAGTATTAATGTATAATTTTTGTTGGCATAGAATTCCACAAGAATGTTCATCCCTACTGAACGAGAAGTCTTGGTACTTCATTTTTCGGTGGATATTGAGAACACTTTTTAGCAAACTAGTTCTGGTTATAAGAAAGAGAGAAGAGAGGGATGGAGTGGAAAGTTCCGTGCTTTAATAGCAAGTGATGCAGTGATAGCTAGCTTTAGTCGATTTATCAGTTTCACCACTCTCTACTTTTCTACAGGTATTTTTTTTCAATCTTTGAGGAAAGAGAATGATCATTTGTTCATCGGTCACTGCTCGGTTTTTTGAAGCTATTCAATGAGCTGAGAGATTTAGAGCATGGCAAGACAGCTGCCCCAGAATCATCTTGAGAATGCCATTCCAGGAACTACACCTAGTCATTGTGTGCAGGAAGAGCATCTGATCTCTGCACGCAAATGGTATTTCTCCAGACAGGAAATTGAAAATCATTCTCCATCCAGGAAGGATGGAGTTGATTTCAAGAAAGAGTCTCAACTGCGGAAGTCATATTGCTTGTTTCTTCAGGAGCTTGGCATGAAGCTGAAAGTGTAAGACTTCAATAGTTTCTACGAATGTAACAGTTTCTGGGTTTCTTTAATACGTTTTTTTTTTAACTTGCTCAAAGAAAAAAATTCGATAACCCATTTTTGCAAGGCACTTCCTAAAAACTATCTTTAATTGTAGTTATCTTCATTCTTCAGTCACCACCTGTTTTGACGCACACAAGTTCTATTTCTCGGTCCATTATTGTTGCTAGTCAATGCTTTCATAGTGTCATGGGGCATTTTGATTAAGTTTTGTTACAGAGCCAAGCCTAGGAAGAGAACAGCTGGAAATGTGGATATGCTTGTGTTTGAATTTGCACTGGAGTTGGTCTAATAAGCTTAGGAGGGTTTTTATTTCTAAAATATTATTTGAATTTTTATTTATATAGTGTAAGACGACACCCAAACACATTGCAATTTTTCCAAGTTTTCCATCTCTCCCCGTTATGTGTTTACTTTTTTGTCACAAAAATTCATGATAATAAACAAATAATAAAATAGTTTTAGATGAATACTACATACTGTTGATGACAACCATGGTGTGGTCCATTGAACAAAAAGATCCCGTAGTAAGCACCATTTCTTTGTTGTTGATTTTATTGGAAAATTGAGCATATAAGGAATGAATCATAAACTCATATGTGAGCAAGGATCTAGATCATAGGGGTACACATGCTTGGTGAGTAGGCTGGAACAGCACCATGCCTTTTCTGATGCTGAATGCTGAAATATGTTCTGTTAACACGTTTCTGATTTCTAGAACAGCATTTTATATTTCTGTTGTATACATCGTGCTTCTTGCTTATCTGCATAACAAAGTCTTTCCTCCCTCCAATCATTCTCCATTTTCTCCACCACCACCACCATCTAACTCTCAAGTATTCACAATTATTACAAGAAAATTTCTTCAAATGTACTCTGTTCATATTTAAGTAGATTCGACTATTTCTTCTGCTGTATTCTTTTAGCTGAGAAATATTTCTTATAATGTGATTCTTCATATAACTTTCTAGCCATTTCCGTTCTCTTCACTTGCCAGCCTCTAGAGGAATGGATCTGGTGTTTTGTTTTTTGATGACCAGTTGTGTTGTTTAAATATTGATGATTTTAGTTTATGTAATATTTTATCTTATATCAATAATCAGGACTAGTTCCAATTTTTCACGTGGATGTGCTGATTTTTTATTTATATACCTTTCAGGCCTCAAGTAACAATTGCAAGTGCCATGATGGTATGCCACCGGTTCTATATGTGTCAGTCACATGCTAAAAATGACTGGCAGGTAAGTTGATGGTTTAAGAATTGTTTTCTATCGTCCTATCCTATAGTAAGCCCATTGATGTTTGAAAAGTTACAATGCAACTGTCTCAAGTTTTGTTAAAAGAAAAAAAAAATTGAAGCATCATACCTACAACAACTTGTTAGTAGTTTCATAAAAAGCCATATAGTGTTTGATGATCTTGAATCTTTCCTCCTACAGTTCTCGTTTTCTTTAATACCATTTCTCTTTTGTTCAAAAACCACTCAAAGATTGTAGCTTTGACCATGATAATTTAGCCATCTTTTTCTACTAAATGCCACCAATCTCAAGAAAACATTATTTTTGCTGCCAAGTTGAAGACCCTTGGGAAATTTAGTCCTTGAAACACCGACCCAAAATTTTCTCCCATAAGAATAATGGGAGAACGGATGATTGTGCTTCTTTTCTACTTTTAAATGTAAACTGCAACAACTTGGGTTCATAACTAGATATGGCCATCTTTTTTGGAGTTTTATAGTTGAGTTTAAACCCTCAAAATGTATTAACCGTACCATTATATTGACTTTTGTTGGAAAGTTAACTTTCCATACAGCATACATGAAATTATTGGGGACCAGTTATGAATGGCCTTTTGATGTGCAGCCTTTGATCCATTCCTTGTACTCAAATGAGCTAATACAAGGAGCAAGGCAAAGAAAATTCAAGAGACTTTTACATTGTATCTTCAAAATCTAGGCAAAAGGAAAGAATGAATTTTGAACCCCAATTTCTGAATATTTGCTTGGATCCTGGAAGAACCTCTAACCTTGTAATCCAGTAGCCATAGCGCTTATCACCTTAAAAAGTAGCTATAGCGCCTATCACCTTGAACTGAGAACTCTCCCAAAACCAGCTATTACCAACACCCTCCTTTTCAGTAATTGAATTTCCCTCAGCCAGCTTAAAAAATCATAAAATTTACCCTCTTCTTCTCTCCTAGGTTTCTCTGGTAATTATGAGTTTTCCCCCAGGTTTCTTTGGTAATTATCACTTTATTCATTCTTAGGAAAAAACAACACATGTGATGGAATCTAGTTATGCATTCCTAAAATTTCATCATTACGCTGTAAAGTTGTGAATACTATGTCTTCGCATCTCAACTCTTTGGTGTTTATTTTGGATTGGTCAAAATATACTTTTGCTCCATGAGGTTTGTGTGAGGTGTCTTTTTAGTCTCTGAAGTACAAAATTGTTTTAAATGGTCTTTGAGCTTGTTTAACCATTAGTTGTCTAATGGAAAGATGATGTGGCAGCTTTTATGTGATTTGACAATTTTGATAAATTTTATATTAATTTTGGTCTAGGTGACTATTTAATTTTTCCTGCCTCGCTTCTTTTCTCTCATGTTCTACATTCTTCCTCCTCATTTTCTTCTCTTTTTCTCCCATTGCTGGTAATTTCTTAAGACATCTTCTGGTATCCCCAGAACCTCTCCCACCTCAGTTCCATACAACTAGTAGTTTTGGCTCCTCCATTCTTTGATTCTAATTCATTACGACTTAGGGGGGTTGAAAATCTAGTGCTTCCATCATCTGCCGCAAACTTTGATAATGAAAAACACCAGAAATTTGAAGCTTACTCCATTGCTTCCATCTGAGAGATTGATTTTCAATCTCATTTAAGAATGGAAGGGCCTTGGCTCAGTGATTCCAGAATCCTAGTCATCCTTTCGTGGTTGCCACTGCTGCATTTTTCAAAAGGAGAACAGTTTTCATCGGTGGGAACAGGTAGAGCTGTGACAATAGTATTAGTGGAAGTCTTTGTACCATTGCTGTTGCAAAGAGAGGAAAAACAATGTGGAATTTCAACAAGGACAGACTAGAACTTGACCCTATTTTCCGGGGGAAAACTACGAGGACAATGGGTGTTCGATTATAGAACAGGTTTGATTCAATGGGCAATTGATCATGAACAAGAAGAATTCAGGGGACTCAATGTTAGATCCGCTTTTTATATTAGAATTGTAGTGGGCGCCAGTTCTTCAGTTGGATCAAACATTGGTAGATTGTCTTAATGTCCTCTAAAGCTTAATCTCTTTTGGAAGAACAATTTGAAGAAGGAACCTCTTGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGTGGGGGGAAACTCAAATCTTATTAGTTTGGGTGGTTGACAGATTTCGAACATCCCCATGGAGGAGTTAACAAGAGTGGTTGGATTGTGTTTTGAGAAATGACAGGAGATTTCTAGAGGAAGTGGTTAAAGGGGGAGTAGTGGAAGGGGAGATTTTGGTTTGAAATGTTTCCTTTAAACGGATTTTTTTGGTAACTTTTCTATTACCTCTTACAAGTTGGGTTTTTTTTTTTTTTTTTTTTCCTTCACTCCATATTCTAGGAATAACAGAATAGCCATTGATCCGAAGAACTATTTCATTTTCCTTTATTAGGTTTCCATAGACATCGAAAAATCTTTAAGTTCCCGGGGCTGCACCCTGATTTTTTTCCTTGAAAAGAAAAACGTAATTTTGAAGCAAAAGATTAAATAAGGAAAAGGTCTTTCAAAATCTTCTTTTTCTTTTTTTCTTTTTTAATATCACAACCCACATCATCTGGAAAGGATTTATGACAATTGGATGGGATTTTGTCTTATAACTCAAAACATGTATAATTTGTCAGACAATCGGAACAGCAGGTATCTTTCTTGCCTGTAAGATTGAAGAGACACCACGGTTTCTGAATGATGTCGTCGTTGTGGCTTTTGAGTTGATATTCAAACGGGATTCTTCTGCCTCTAAAAGAATTAGACAAAAAGTACGTACGCTGCCTATTATCTTCTTTAACATTTATGTTTAAGTGGTTGATCACTCTGTATATTTTAAGGAAATAATCGGATGGCTGAATACAACATTATGCCTGTAGGAAGTTTTCAACAAACAAAAGGAATTAGTCTTGATTAGTGAGAGGCTTATATTGTCAACACTTGCATTTGATGTTGACATTCAGCTTCCCTACAAGCCACTTGTTGCTACTTTAAAAAAATTGGGAATGGCTGCGGATCTTGGGAAGGTGGCTTGGAATTTTGTAAATGATTGGTAAAGGACTTCATCTTACTCATCAAGTTTCTGTTTACATCAAACTAGGATCATCTTTTAGAGATTAATGTCGTCATCATGAAACTTGTAGGCTTTATACAACACTGTGCTTGGAGTACAAACCCCATTATATTGCTGCAGGTTCGATATTCCTTGCTTCCAAATTTCAAAAAGTAAAATTGCCTTCGAACGAGGGAAAGGCTTGGTGGATGGAGTTCGATGTTTCGCCAAAACAGTTACAAGGTTGCTAAACTTGATCTTTGTACTCGTATTTGTTCTGTCTTGCTAGTTTTTGGCTTCAAATGAGCATGATATATATGATATCTCAGTAGTAAATCAATGTAAAAGAGTAGGTAATGATATATTTTTCTCTAAATAAGGGAAGGGAATGGAAGTTATCTGTACCATTTTCCCCATTATATACATATGCCTCTTACCCCTCTATTTTACTGTTGCTACTTGAGAGCATTTACTAAATGTTCTTTGGAATTCCTTTCAGAGGTTATACAGCAAATGTTGAAGTTATTTGAGAAAGATAGAAAACAAAGCCTACCACCTTCAAAAGAGAAGAATCATAAGCCAGAAGCTTTAGATGGACAGACAAGAGTTGATAGCTCCCAATCATGTATATCAAGCGTGACGATTTCTGATCATCTCGATAGTCACAAAGCCATTAGGGAGGCCAGTGACTGCAACAAGTCTGTAACGCCTAGTCGATGCCACAATCAGCAAAATGTGAATTACCGCATTAGTCCTGTGGAAGTTTTACCCTGCCAAACAAGCGATACTGGGAGTTCAAGTAGTGCCATTGACAATGGTGATACTGGGATTTGTCAGAATACTGAAGAAAATTATCCTGATCAGATCAAACAGTCAAAAACTGTTGCTATTTCTATGTCTAAGGACTACAAAAAGATAAACTTATGTCAAATCAGAGAGGCAATAAAGAGAAGACGACTCTGTAGAACTACAAGCACAACGGAGGTACAGCCAATGAACTCGGATGTTGACAGCGAAGCATGGATAGAAAAGGAGCTGGAACAGGGAATAGAGCTAGAATATGAATCCTCATTGAAGAAGAGACAAAAGGCATCATGAAGTTGGGAATGCAATTCTACTTACTGATACAGCATCGTTTTTTTGTCAGAGCTTTTGATTGAATCCAGGAATTCTTCATACTGTAAGTATTAAGAGGGCATTTTCAGCTGATTATTCATTCTTTTGATAGTTTTTTTCCCCCATTCTCTTATGTAGTCTAATAACGTACCGATACATTTGTGTCACTCTTTCATTAATAGTAAGTGTACATTTTTACGTCGAAGTATATTTATATCACAACTTTCTATTTGTTCTTAGGAATGTTATGCAACCTTATCATGGGACCTTTGTTATGTGAGACCATTTGTACAATTTGCCTTTTGAGCTAGCTGTTGTCCACACTTCTGTTTTCTTGCTACAGGATCTGATCCTAAATGTTAGGAAGTTGTGTAATATTGTTTCAGTACCGACGGAGGGTTTTCTTGTAAGCGATTGACTATATGTATTCAT

mRNA sequence

CATTATCGATAGCTACGATTTTGGCGCGGCGGGTTGTGTGTTACATTCTACCCTCGAACATCCTCTGTGTTCGCCGCCAAGAATTTCATTGATCCATCAAGTAAAAGCGTTTGCGCGTTTGCGTGGTTTCGAAGCAACGAGTCAATTCAAGTCCAGTCCAATCTAGTGTTTCTGCAGCTGTTTTCTTCCTACGGTGGCCGGAAGTTAGGGTTTCCGGTGTAGCTTGAAGCTGCTCCGCTCCCAACCCGAATATTCGCTTCTCTTCTGGATATTCATCAGGTATTTTTTTTCAATCTTTGAGGAAAGAGAATGATCATTTGTTCATCGGTCACTGCTCGGTTTTTTGAAGCTATTCAATGAGCTGAGAGATTTAGAGCATGGCAAGACAGCTGCCCCAGAATCATCTTGAGAATGCCATTCCAGGAACTACACCTAGTCATTGTGTGCAGGAAGAGCATCTGATCTCTGCACGCAAATGGTATTTCTCCAGACAGGAAATTGAAAATCATTCTCCATCCAGGAAGGATGGAGTTGATTTCAAGAAAGAGTCTCAACTGCGGAAGTCATATTGCTTGTTTCTTCAGGAGCTTGGCATGAAGCTGAAAGTGCCTCAAGTAACAATTGCAAGTGCCATGATGGTATGCCACCGGTTCTATATGTGTCAGTCACATGCTAAAAATGACTGGCAGACAATCGGAACAGCAGGTATCTTTCTTGCCTGTAAGATTGAAGAGACACCACGGTTTCTGAATGATGTCGTCGTTGTGGCTTTTGAGTTGATATTCAAACGGGATTCTTCTGCCTCTAAAAGAATTAGACAAAAAGAAGTTTTCAACAAACAAAAGGAATTAGTCTTGATTAGTGAGAGGCTTATATTGTCAACACTTGCATTTGATGTTGACATTCAGCTTCCCTACAAGCCACTTGTTGCTACTTTAAAAAAATTGGGAATGGCTGCGGATCTTGGGAAGGTGGCTTGGAATTTTGTAAATGATTGGCTTTATACAACACTGTGCTTGGAGTACAAACCCCATTATATTGCTGCAGGTTCGATATTCCTTGCTTCCAAATTTCAAAAAGTAAAATTGCCTTCGAACGAGGGAAAGGCTTGGTGGATGGAGTTCGATGTTTCGCCAAAACAGTTACAAGAGGTTATACAGCAAATGTTGAAGTTATTTGAGAAAGATAGAAAACAAAGCCTACCACCTTCAAAAGAGAAGAATCATAAGCCAGAAGCTTTAGATGGACAGACAAGAGTTGATAGCTCCCAATCATGTATATCAAGCGTGACGATTTCTGATCATCTCGATAGTCACAAAGCCATTAGGGAGGCCAGTGACTGCAACAAGTCTGTAACGCCTAGTCGATGCCACAATCAGCAAAATGTGAATTACCGCATTAGTCCTGTGGAAGTTTTACCCTGCCAAACAAGCGATACTGGGAGTTCAAGTAGTGCCATTGACAATGGTGATACTGGGATTTGTCAGAATACTGAAGAAAATTATCCTGATCAGATCAAACAGTCAAAAACTGTTGCTATTTCTATGTCTAAGGACTACAAAAAGATAAACTTATGTCAAATCAGAGAGGCAATAAAGAGAAGACGACTCTGTAGAACTACAAGCACAACGGAGGTACAGCCAATGAACTCGGATGTTGACAGCGAAGCATGGATAGAAAAGGAGCTGGAACAGGGAATAGAGCTAGAATATGAATCCTCATTGAAGAAGAGACAAAAGGCATCATGAAGTTGGGAATGCAATTCTACTTACTGATACAGCATCGTTTTTTTGTCAGAGCTTTTGATTGAATCCAGGAATTCTTCATACTGTAAGTATTAAGAGGGCATTTTCAGCTGATTATTCATTCTTTTGATAGTTTTTTTCCCCCATTCTCTTATGTAGTCTAATAACGTACCGATACATTTGTGTCACTCTTTCATTAATAGTAAGTGTACATTTTTACGTCGAAGTATATTTATATCACAACTTTCTATTTGTTCTTAGGAATGTTATGCAACCTTATCATGGGACCTTTGTTATGTGAGACCATTTGTACAATTTGCCTTTTGAGCTAGCTGTTGTCCACACTTCTGTTTTCTTGCTACAGGATCTGATCCTAAATGTTAGGAAGTTGTGTAATATTGTTTCAGTACCGACGGAGGGTTTTCTTGTAAGCGATTGACTATATGTATTCAT

Coding sequence (CDS)

ATGGCAAGACAGCTGCCCCAGAATCATCTTGAGAATGCCATTCCAGGAACTACACCTAGTCATTGTGTGCAGGAAGAGCATCTGATCTCTGCACGCAAATGGTATTTCTCCAGACAGGAAATTGAAAATCATTCTCCATCCAGGAAGGATGGAGTTGATTTCAAGAAAGAGTCTCAACTGCGGAAGTCATATTGCTTGTTTCTTCAGGAGCTTGGCATGAAGCTGAAAGTGCCTCAAGTAACAATTGCAAGTGCCATGATGGTATGCCACCGGTTCTATATGTGTCAGTCACATGCTAAAAATGACTGGCAGACAATCGGAACAGCAGGTATCTTTCTTGCCTGTAAGATTGAAGAGACACCACGGTTTCTGAATGATGTCGTCGTTGTGGCTTTTGAGTTGATATTCAAACGGGATTCTTCTGCCTCTAAAAGAATTAGACAAAAAGAAGTTTTCAACAAACAAAAGGAATTAGTCTTGATTAGTGAGAGGCTTATATTGTCAACACTTGCATTTGATGTTGACATTCAGCTTCCCTACAAGCCACTTGTTGCTACTTTAAAAAAATTGGGAATGGCTGCGGATCTTGGGAAGGTGGCTTGGAATTTTGTAAATGATTGGCTTTATACAACACTGTGCTTGGAGTACAAACCCCATTATATTGCTGCAGGTTCGATATTCCTTGCTTCCAAATTTCAAAAAGTAAAATTGCCTTCGAACGAGGGAAAGGCTTGGTGGATGGAGTTCGATGTTTCGCCAAAACAGTTACAAGAGGTTATACAGCAAATGTTGAAGTTATTTGAGAAAGATAGAAAACAAAGCCTACCACCTTCAAAAGAGAAGAATCATAAGCCAGAAGCTTTAGATGGACAGACAAGAGTTGATAGCTCCCAATCATGTATATCAAGCGTGACGATTTCTGATCATCTCGATAGTCACAAAGCCATTAGGGAGGCCAGTGACTGCAACAAGTCTGTAACGCCTAGTCGATGCCACAATCAGCAAAATGTGAATTACCGCATTAGTCCTGTGGAAGTTTTACCCTGCCAAACAAGCGATACTGGGAGTTCAAGTAGTGCCATTGACAATGGTGATACTGGGATTTGTCAGAATACTGAAGAAAATTATCCTGATCAGATCAAACAGTCAAAAACTGTTGCTATTTCTATGTCTAAGGACTACAAAAAGATAAACTTATGTCAAATCAGAGAGGCAATAAAGAGAAGACGACTCTGTAGAACTACAAGCACAACGGAGGTACAGCCAATGAACTCGGATGTTGACAGCGAAGCATGGATAGAAAAGGAGCTGGAACAGGGAATAGAGCTAGAATATGAATCCTCATTGAAGAAGAGACAAAAGGCATCATGA

Protein sequence

MARQLPQNHLENAIPGTTPSHCVQEEHLISARKWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQVTIASAMMVCHRFYMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRDSSASKRIRQKEVFNKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAADLGKVAWNFVNDWLYTTLCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQEVIQQMLKLFEKDRKQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTISDHLDSHKAIREASDCNKSVTPSRCHNQQNVNYRISPVEVLPCQTSDTGSSSSAIDNGDTGICQNTEENYPDQIKQSKTVAISMSKDYKKINLCQIREAIKRRRLCRTTSTTEVQPMNSDVDSEAWIEKELEQGIELEYESSLKKRQKAS

Homology

[Close]

BLAST of CmaCh05G002610 vs. ExPASy Swiss-Prot
Match: Q2QQS5 (Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.7e-85
Identity = 194/480 (40.42%), Postives = 297/480 (61.88%), Query Frame = 0


Query: 5   LPQNHLENAIPGTTPSHCVQ---EEHLISARKWYFSRQEIENHSPSRKDGVDFKKESQLR 64
           +P +   + I   +P    Q   EE       WYFSR+EIE +SPSR+DG+D KKES LR
Sbjct: 4   MPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKESYLR 63

Query: 65  KSYCLFLQELGMKLKVPQVTIASAMMVCHRFYMCQSHAKNDWQTIGTAGIFLACKIEETP 124
           KSYC FLQ+LGM+LKVPQVTIA+A++ CHRFY+ QSHAKND +TI T  +FLA K+EETP
Sbjct: 64  KSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEETP 123

Query: 125 RFLNDVVVVAFELIFKRDSSASKRIRQKEVFNKQKELVLISERLILSTLAFDVDIQLPYK 184
           R L DV++V++E+I K+D +A +RI+QKEV+++QKEL+L++ER++L+TL FD+++  PYK
Sbjct: 124 RPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHHPYK 183

Query: 185 PLVATLKKLGMAAD-LGKVAWNFVNDWLYTTLCLEYKPHYIAAGSIFLASKFQKVKLPSN 244
           PLV  ++K  +A + L +VAWNFVND L T+LCL++KPH+IAAG+IFLA+KF KVKLPS+
Sbjct: 184 PLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 243

Query: 245 EGKAWWMEFDVSPKQLQEVIQQMLKLFEKDRKQSLPPSKEKNHKPEALDGQTRVDSSQSC 304
             K WW EFDV+P+QL+EV  QML+L+E++      PS    H  EA      V + +  
Sbjct: 244 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS----HGNEAEGSSASVPNQRVS 303

Query: 305 ISSVTISDHLDSHKAIREASDCNKSVTPSRCHNQQNVNYRISPVE--VLPCQTSDTGS-- 364
           +     S+        +++S  + +  PS  H  ++ N     V+  +L     D GS  
Sbjct: 304 VK----SEETPLPHQSKQSSSQHSTGAPSH-HGVEHSNLEKQTVDQKMLQNDNGDHGSNK 363

Query: 365 -----SSSAIDNG-DTGICQNTE-----ENYPDQIKQSKTVAISMSKD---------YKK 424
                S S +D G + G+  + +     +N P     S+   ++ + +           K
Sbjct: 364 TRSNQSGSRVDFGANDGLHHDKQSMTENKNLPSHGNSSEIRDVNRNGNDGTNVTSLMVNK 423

Query: 425 INLCQIREAIKRRRLCRTTSTTEVQPMNSDVDSEAWIEKELEQGIELEYESSLKKRQKAS 457
           I+  +++  ++++R  +     +V+ ++ D D E  +E ++E  +E   ++ +K+ +K S
Sbjct: 424 IDKDKVKAQMEKQRKLKGDVARKVEVIDDDDDLERQLEHDIELAVE---DNKIKQERKQS 471

[Close]

BLAST of CmaCh05G002610 vs. ExPASy Swiss-Prot
Match: Q2RAC5 (Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 7.7e-85
Identity = 193/446 (43.27%), Postives = 285/446 (63.90%), Query Frame = 0


Query: 10  LENAIPGTTPSHCVQEEHLISARKWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQ 69
           +EN+ P  TP     E   + A  WYFSR+EIE +S SR+DG+D KKES LRKSYC FLQ
Sbjct: 15  VENS-PYRTPYDRYAEGGQLGA-SWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQ 74

Query: 70  ELGMKLKVPQVTIASAMMVCHRFYMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVV 129
           +LGM+LKVPQVTIA+A++ CHRF++ QSHAKND +TI T  +FLA K+EETPR L DV++
Sbjct: 75  DLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIL 134

Query: 130 VAFELIFKRDSSASKRIRQKEVFNKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKK 189
           +++E+I K+D++A +RI+QKEV+ +QKEL+L+ ER++L TL FD+++  PYKPLV  +KK
Sbjct: 135 ISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKK 194

Query: 190 LGMAAD-LGKVAWNFVNDWLYTTLCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWME 249
             +A + L +VAWNFVND L T+LCL++KPH+IAAG+IFLA+KF KVKLPS+  K WW E
Sbjct: 195 FKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQE 254

Query: 250 FDVSPKQLQEVIQQMLKLFEKDRKQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTISD 309
           FDV+P+QL+EV  QML+L+E++R  + PPS+  + +  +     +  S ++  SS     
Sbjct: 255 FDVTPRQLEEVSNQMLELYEQNR-VAPPPSQGNDTEGSSASVVNQRASGKAPGSSEEPPT 314

Query: 310 HLDSHKAIREASDCNKSVTPSRCHNQQNVNYRISPVEVLPCQTSDTGSSSSAIDNGDTGI 369
           H ++H A R++S             +QN + R+      P   +  G+++S         
Sbjct: 315 H-ENHLAPRQSSTPGHQGYDHPHPEKQNSSQRV------PQNDARDGTANS--------- 374

Query: 370 CQNTEENYPDQIKQSKTVAISMSKDYKKINLCQIREAIKRRRLCRTTSTTEVQPMNSDVD 429
                        +   ++ +M    KKI+  +++ A+++RR  +     +V  M    D
Sbjct: 375 ------------NEGPNMSSTMDA-MKKIDKDKVKAALEKRRKSKGDVAKKVDIM----D 424

Query: 430 SEAWIEKELEQGIELEYESSLKKRQK 455
            +  IE+ELE G+EL  E    K ++
Sbjct: 435 DDDLIERELEHGVELAAEDEKIKHER 424

[Close]

BLAST of CmaCh05G002610 vs. ExPASy Swiss-Prot
Match: Q9FKE6 (Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2)

HSP 1 Score: 311.6 bits (797), Expect = 1.5e-83
Identity = 170/348 (48.85%), Postives = 237/348 (68.10%), Query Frame = 0


Query: 20  SHCVQEEHLISARKWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQ 79
           SH  QEE      +WYF R+EIE +SPSR DG+D KKE+ LRKSYC FLQ+LGM+LKVPQ
Sbjct: 23  SHEKQEE----VSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQ 82

Query: 80  VTIASAMMVCHRFYMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRD 139
           VTIA+A++ CHRF+  QSHAKND +TI T  +FLA K+EETPR L DV+ V++E+I K+D
Sbjct: 83  VTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKD 142

Query: 140 SSASKRIRQKEVFNKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAAD-LGK 199
             AS++I+QKEV+ +QKEL+L  E+++LSTL FD+++  PYKPLV  +KK  +A + L +
Sbjct: 143 PGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQ 202

Query: 200 VAWNFVNDWLYTTLCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQE 259
           VAWNFVND L T+LCL++KPH+IAAG+IFLA+KF KVKLPS+  K WW EFDV+P+QL++
Sbjct: 203 VAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLED 262

Query: 260 VIQQMLKLFEKDRKQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTISDHLDSHKAIRE 319
           V  QML+L+E++R   +P S+    +     G  +   S++ +S+       D H   R+
Sbjct: 263 VSNQMLELYEQNR---VPASQGSEVESSVGGGSAQRPGSRNAVST-------DEHVGSRQ 322

Query: 320 ASDCNKSVTPSRCHNQQNVNYRISPVEVLPCQTSDTGSSSSA---IDN 364
            S    +      H Q N +      + +  Q ++ G   +A   +DN
Sbjct: 323 TSSVRST------HEQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDN 350

[Close]

BLAST of CmaCh05G002610 vs. ExPASy Swiss-Prot
Match: Q8GYM6 (Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.4e-80
Identity = 179/428 (41.82%), Postives = 268/428 (62.62%), Query Frame = 0


Query: 33  KWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQVTIASAMMVCHRF 92
           +WYF R+EIE +SPSR D +D KKE+ LRKSYC FLQ+LGM+LKVPQVTIA+A++ CHRF
Sbjct: 32  RWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRF 91

Query: 93  YMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRDSSASKRIRQKEVF 152
           ++ QSHA+ND +TI T  +FLA K+EETPR L DV+VV++E+I K+D + +++I+QKEV+
Sbjct: 92  FIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQKEVY 151

Query: 153 NKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAAD-LGKVAWNFVNDWLYTT 212
            +QKEL+L  E+++LSTL FD ++  PYKPLV  +KK  +A + L +VAWNFVND L T+
Sbjct: 152 EQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTS 211

Query: 213 LCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQEVIQQMLKLFEKDR 272
           LCL++KPH+IAAG+IFLA+KF KVKLPS+  K WW EFDV+P+QL++V  QML+L+E++R
Sbjct: 212 LCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNR 271

Query: 273 KQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTISDHL-DSHKAIREASDCNKSVTPSR 332
             +   S+ ++              S       + SD+L  S KA +  S+ N S     
Sbjct: 272 VPASQVSEVESSVGGGSAHHVGSRPSARLTHEHSNSDNLGGSTKATQNRSNDNGSGEAGS 331

Query: 333 CHNQQNVNYRISPVEVLPCQTSDTGSSSSAIDNGDTGICQNTEENYPDQIKQS--KTVAI 392
              +Q         + +  ++     S S ++       +    ++P+  K     T  +
Sbjct: 332 VITEQKGERDTETKDSMHTESHPAHKSRSGVEAPGEDKIEKAGAHFPEDDKSRIVGTADV 391

Query: 393 SMSKDYKKINLCQIREAIKRRRLCRTTSTTEVQPMNSDVDSEAWIEKELEQGIELEYESS 452
           ++S+  K I +   R+ +K +   +     + +  +  VD +  IE+ELE  +EL  E  
Sbjct: 392 TVSQSPKDIKM--FRDKVKAKLEAKKVQGEKTRKKDL-VDEDDLIERELED-VELAVEDD 451

Query: 453 LKKRQKAS 457
              + K+S
Sbjct: 452 KDIQNKSS 455

[Close]

BLAST of CmaCh05G002610 vs. ExPASy Swiss-Prot
Match: Q8LBC0 (Cyclin-T1-3 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-3 PE=1 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 1.8e-78
Identity = 144/245 (58.78%), Postives = 183/245 (74.69%), Query Frame = 0


Query: 33  KWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQVTIASAMMVCHRF 92
           KWYFSR+EIE  SPSRKDG+D  KES LR SYC FLQ LGMKL V QVTI+ AM++CHRF
Sbjct: 33  KWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRF 92

Query: 93  YMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRDSSASKRIRQKEVF 152
           YM QSHAKNDWQTI T+ +FLACK E+ P  L+ VVV ++E+I++ D SAS RI Q E +
Sbjct: 93  YMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTECY 152

Query: 153 NKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAADLGKVAWNFVNDWLYTTL 212
           ++ KE++L  E L+LST AF +DI+LPYKPL A L +L    DL   AWNFV+DW+ TTL
Sbjct: 153 HEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPDLATAAWNFVHDWIRTTL 212

Query: 213 CLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQEVIQQMLKLFEKDRK 272
           CL+YKPH IA  ++ LA+ FQ  K+ S   + WW+EF V+ K L+EVIQ+M  L E DR+
Sbjct: 213 CLQYKPHVIATATVHLAATFQNAKVGSR--RDWWLEFGVTTKLLKEVIQEMCTLIEVDRR 272

Query: 273 QSLPP 278
           +++PP
Sbjct: 273 RNMPP 275

[Close]

BLAST of CmaCh05G002610 vs. TAIR 10
Match: AT5G45190.1 (Cyclin family protein )

HSP 1 Score: 311.6 bits (797), Expect = 1.0e-84
Identity = 170/348 (48.85%), Postives = 237/348 (68.10%), Query Frame = 0


Query: 20  SHCVQEEHLISARKWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQ 79
           SH  QEE      +WYF R+EIE +SPSR DG+D KKE+ LRKSYC FLQ+LGM+LKVPQ
Sbjct: 23  SHEKQEE----VSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQ 82

Query: 80  VTIASAMMVCHRFYMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRD 139
           VTIA+A++ CHRF+  QSHAKND +TI T  +FLA K+EETPR L DV+ V++E+I K+D
Sbjct: 83  VTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKD 142

Query: 140 SSASKRIRQKEVFNKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAAD-LGK 199
             AS++I+QKEV+ +QKEL+L  E+++LSTL FD+++  PYKPLV  +KK  +A + L +
Sbjct: 143 PGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQ 202

Query: 200 VAWNFVNDWLYTTLCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQE 259
           VAWNFVND L T+LCL++KPH+IAAG+IFLA+KF KVKLPS+  K WW EFDV+P+QL++
Sbjct: 203 VAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLED 262

Query: 260 VIQQMLKLFEKDRKQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTISDHLDSHKAIRE 319
           V  QML+L+E++R   +P S+    +     G  +   S++ +S+       D H   R+
Sbjct: 263 VSNQMLELYEQNR---VPASQGSEVESSVGGGSAQRPGSRNAVST-------DEHVGSRQ 322

Query: 320 ASDCNKSVTPSRCHNQQNVNYRISPVEVLPCQTSDTGSSSSA---IDN 364
            S    +      H Q N +      + +  Q ++ G   +A   +DN
Sbjct: 323 TSSVRST------HEQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDN 350

[Close]

BLAST of CmaCh05G002610 vs. TAIR 10
Match: AT4G19600.1 (Cyclin family protein )

HSP 1 Score: 300.4 bits (768), Expect = 2.4e-81
Identity = 179/428 (41.82%), Postives = 268/428 (62.62%), Query Frame = 0


Query: 33  KWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQVTIASAMMVCHRF 92
           +WYF R+EIE +SPSR D +D KKE+ LRKSYC FLQ+LGM+LKVPQVTIA+A++ CHRF
Sbjct: 32  RWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRF 91

Query: 93  YMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRDSSASKRIRQKEVF 152
           ++ QSHA+ND +TI T  +FLA K+EETPR L DV+VV++E+I K+D + +++I+QKEV+
Sbjct: 92  FIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQKEVY 151

Query: 153 NKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAAD-LGKVAWNFVNDWLYTT 212
            +QKEL+L  E+++LSTL FD ++  PYKPLV  +KK  +A + L +VAWNFVND L T+
Sbjct: 152 EQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTS 211

Query: 213 LCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQEVIQQMLKLFEKDR 272
           LCL++KPH+IAAG+IFLA+KF KVKLPS+  K WW EFDV+P+QL++V  QML+L+E++R
Sbjct: 212 LCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNR 271

Query: 273 KQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTISDHL-DSHKAIREASDCNKSVTPSR 332
             +   S+ ++              S       + SD+L  S KA +  S+ N S     
Sbjct: 272 VPASQVSEVESSVGGGSAHHVGSRPSARLTHEHSNSDNLGGSTKATQNRSNDNGSGEAGS 331

Query: 333 CHNQQNVNYRISPVEVLPCQTSDTGSSSSAIDNGDTGICQNTEENYPDQIKQS--KTVAI 392
              +Q         + +  ++     S S ++       +    ++P+  K     T  +
Sbjct: 332 VITEQKGERDTETKDSMHTESHPAHKSRSGVEAPGEDKIEKAGAHFPEDDKSRIVGTADV 391

Query: 393 SMSKDYKKINLCQIREAIKRRRLCRTTSTTEVQPMNSDVDSEAWIEKELEQGIELEYESS 452
           ++S+  K I +   R+ +K +   +     + +  +  VD +  IE+ELE  +EL  E  
Sbjct: 392 TVSQSPKDIKM--FRDKVKAKLEAKKVQGEKTRKKDL-VDEDDLIERELED-VELAVEDD 451

Query: 453 LKKRQKAS 457
              + K+S
Sbjct: 452 KDIQNKSS 455

[Close]

BLAST of CmaCh05G002610 vs. TAIR 10
Match: AT5G45190.2 (Cyclin family protein )

HSP 1 Score: 297.0 bits (759), Expect = 2.6e-80
Identity = 167/359 (46.52%), Postives = 235/359 (65.46%), Query Frame = 0


Query: 20  SHCVQEEHLISARKWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKV-- 79
           SH  QEE      +WYF R+EIE +SPSR DG+D KKE+ LRKSYC FLQ+LGM+LK+  
Sbjct: 23  SHEKQEE----VSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKLAW 82

Query: 80  ---------PQVTIASAMMVCHRFYMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVV 139
                      VTIA+A++ CHRF+  QSHAKND +TI T  +FLA K+EETPR L DV+
Sbjct: 83  FLDIIAYVCTDVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVI 142

Query: 140 VVAFELIFKRDSSASKRIRQKEVFNKQKELVLISERLILSTLAFDVDIQLPYKPLVATLK 199
            V++E+I K+D  AS++I+QKEV+ +QKEL+L  E+++LSTL FD+++  PYKPLV  +K
Sbjct: 143 FVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIK 202

Query: 200 KLGMAAD-LGKVAWNFVNDWLYTTLCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWM 259
           K  +A + L +VAWNFVND L T+LCL++KPH+IAAG+IFLA+KF KVKLPS+  K WW 
Sbjct: 203 KFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQ 262

Query: 260 EFDVSPKQLQEVIQQMLKLFEKDRKQSLPPSKEKNHKPEALDGQTRVDSSQSCISSVTIS 319
           EFDV+P+QL++V  QML+L+E++R   +P S+    +     G  +   S++ +S+    
Sbjct: 263 EFDVTPRQLEDVSNQMLELYEQNR---VPASQGSEVESSVGGGSAQRPGSRNAVST---- 322

Query: 320 DHLDSHKAIREASDCNKSVTPSRCHNQQNVNYRISPVEVLPCQTSDTGSSSSA---IDN 364
              D H   R+ S    +      H Q N +      + +  Q ++ G   +A   +DN
Sbjct: 323 ---DEHVGSRQTSSVRST------HEQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDN 361

[Close]

BLAST of CmaCh05G002610 vs. TAIR 10
Match: AT1G27630.1 (cyclin T 1;3 )

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-79
Identity = 144/245 (58.78%), Postives = 183/245 (74.69%), Query Frame = 0


Query: 33  KWYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQVTIASAMMVCHRF 92
           KWYFSR+EIE  SPSRKDG+D  KES LR SYC FLQ LGMKL V QVTI+ AM++CHRF
Sbjct: 33  KWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRF 92

Query: 93  YMCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRDSSASKRIRQKEVF 152
           YM QSHAKNDWQTI T+ +FLACK E+ P  L+ VVV ++E+I++ D SAS RI Q E +
Sbjct: 93  YMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTECY 152

Query: 153 NKQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKLGMAADLGKVAWNFVNDWLYTTL 212
           ++ KE++L  E L+LST AF +DI+LPYKPL A L +L    DL   AWNFV+DW+ TTL
Sbjct: 153 HEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPDLATAAWNFVHDWIRTTL 212

Query: 213 CLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQEVIQQMLKLFEKDRK 272
           CL+YKPH IA  ++ LA+ FQ  K+ S   + WW+EF V+ K L+EVIQ+M  L E DR+
Sbjct: 213 CLQYKPHVIATATVHLAATFQNAKVGSR--RDWWLEFGVTTKLLKEVIQEMCTLIEVDRR 272

Query: 273 QSLPP 278
           +++PP
Sbjct: 273 RNMPP 275

[Close]

BLAST of CmaCh05G002610 vs. TAIR 10
Match: AT4G19560.1 (Cyclin family protein )

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-65
Identity = 139/283 (49.12%), Postives = 192/283 (67.84%), Query Frame = 0


Query: 34  WYFSRQEIENHSPSRKDGVDFKKESQLRKSYCLFLQELGMKLKVPQVTIASAMMVCHRFY 93
           W+FSR+EIE +SPSR+DG+D K E++LR SYC FL+ LG +LKVPQVTIA+A+  CHRF+
Sbjct: 31  WFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFF 90

Query: 94  MCQSHAKNDWQTIGTAGIFLACKIEETPRFLNDVVVVAFELIFKRDSSASKRIRQKEVFN 153
           + QSHAKND QTI T  + LA K+EETP  L DV++ ++E I K+D + ++R   KEV++
Sbjct: 91  LRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQR---KEVYD 150

Query: 154 KQKELVLISERLILSTLAFDVDIQLPYKPLVATLKKL---GMAADLGKVAWNFVNDWLYT 213
           +QKELVLI E L+LSTL FD+ I  PYKPLV  +KK         L + AWNFVND L T
Sbjct: 151 QQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRT 210

Query: 214 TLCLEYKPHYIAAGSIFLASKFQKVKLPSNEGKAWWMEFDVSPKQLQEVIQQMLKLFEKD 273
           TLCL+Y+PH+IAAG+I LA++   V L S   +    EFD++P QL+++  Q+L+L+E+ 
Sbjct: 211 TLCLQYQPHHIAAGAILLAAELPTVDLQSYR-EVLCQEFDITPCQLEDIRGQILELYER- 270

Query: 274 RKQSLPPSKEKN----------HKPEALDGQTRVDSSQSCISS 304
               +P S+E            H+P + D    + S++ C SS
Sbjct: 271 ----IPTSQESKVESSGGVAVVHQPISRD----MASTEKCPSS 300

The following BLAST results are available for this feature:

BLAST of CmaCh05G002610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QQS5	2.7e-85	40.42	Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1	[more]
Q2RAC5	7.7e-85	43.27	Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2	[more]
Q9FKE6	1.5e-83	48.85	Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2	[more]
Q8GYM6	3.4e-80	41.82	Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1	[more]
Q8LBC0	1.8e-78	58.78	Cyclin-T1-3 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-3 PE=1 SV=2	[more]

BLAST of CmaCh05G002610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45190.1	1.0e-84	48.85	Cyclin family protein	[more]
AT4G19600.1	2.4e-81	41.82	Cyclin family protein	[more]
AT5G45190.2	2.6e-80	46.52	Cyclin family protein	[more]
AT1G27630.1	1.3e-79	58.78	cyclin T 1;3	[more]
AT4G19560.1	1.1e-65	49.12	Cyclin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 181..265 e-value: 0.0066 score: 25.7 coord: 66..168 e-value: 3.7E-8 score: 43.1
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 60..131 e-value: 1.17436E-12 score: 61.4856
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 178..267 e-value: 1.78533E-4 score: 38.3737
None	No IPR available	GENE3D	1.10.472.10		coord: 176..282 e-value: 3.2E-32 score: 113.1
None	No IPR available	GENE3D	1.10.472.10		coord: 24..174 e-value: 4.2E-46 score: 158.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..292
None	No IPR available	PANTHER	PTHR10026:SF124	CYCLIN-T1-3	coord: 24..447
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 34..174 e-value: 7.6E-19 score: 67.7
IPR043198	Cyclin/Cyclin-like subunit Ssn8	PANTHER	PTHR10026	CYCLIN	coord: 24..447
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 178..278
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 32..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G002610.1	CmaCh05G002610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0032786	positive regulation of DNA-templated transcription, elongation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0008024	cyclin/CDK positive transcription elongation factor complex
molecular_function	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity