CmaCh05G002410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G002410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	B3 domain-containing protein At1g05920-like
Location	Cma_Chr05: 1027305 .. 1031266 (-)
RNA-Seq Expression	CmaCh05G002410
Synteny	CmaCh05G002410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAAAGCGGCGTCCTTTCCAAGACTTTGGATCTGATCTCATCGTTCGGTCTTGATACGAACAAGAGGAAGAACAGGGATTGTGATGATGAGCCGAGGAGGAAGAGGCGAAGAGAGATGGTGTTTTCGAGTACGGTGGAGATGCCGGCGGCGCTGCGACAGAGGATTGAAGCAATGGGAGGCACCGACGTACAAATAGTGATGCAGAAGCAATTGCAAGAAAGTGATCGGAACAAGAACCATGGCCGGTTGTTGATTCCGACGAAGAAGCTGATGAACGAATTCGCGACGGAGGAGGAGGCGGAGTTGATGATGCAAGAAGAGGTTGATCGGAGGAGGAGGATGAGGATCGGAATGGAGGTGGCGATAATAGATGCAGCGCTGAGAGAGAGCGTAATTGGCTTGAAATTGTGGAAGATTGGAAGCGGCCATAACTACTGCTTGGCATCTCAATGGAATTCTTTCGCCGAACAAAACTCATTGGAAAGTGGCGATTACATCCAACTCTGGAGTTTCCGATCAAACAATAATGCTTTTATAGTTAACGGTCACAATCTCTGTTTCGCCCTCGTTAAGCTTGACATCTCCGAGGGGATTTTTAATTTTATTTGATTTTGTTAATTTAATTACACGTAAATTCACCCTTTTGTTTAGTGTCAATAGAGATAGTGAATATGATTTTTTATTTTTTCTTTGGAACTTTCCAATAAAATATATTATTTATTAAATACTAGTCTCACAATTTTTTTATATAATATTATATTTGAAATAACTACTTTTGCCTCGAAACAAAATACTTAAATATTATAATCATTTTTTTAAAATGGTAGATATTATAAAATATAAATAAAAATATCTATAACACGCCTGAGAGCTCATGGTGTTTCTTAAACTGAACTTATTGGCCAAAATAAAATGATGGGTATTTGTAGAAAATTATGAAAATATAATTGTAATAACATATAAAATATTAAAAAAAACTAATTTATTAATCTCGAGCTCGATGGAGAGGGGAATGATGATGGGGATGAGTCCCCGATGTTGGGCTCCATGGAGAAAAATTATCCTCACTCCCACACCCATTTTGGAGATGATCCGCTCATCTAAAATAGGTCCCTACAAAATCACGCTTTGCCGAGTAAATAGATGTTTTTCATAAAATTCATATTAATAAATAAATAATTATTTTACTTATTAGCCTTTATTCGTTTATAAATTTTTTAGCATAAATTTTATTAATGTACTAATTAATTGAGGGAATTGAATTCAGAGAAATATACTAAATAGATAAACTGAAAGAAGAATCTGATGCTAAGAGAATCTATTTTAAAAACTAGTATAGAGTAGATAACGTATCGTAAAAAGATATTTTTTTTCTAACCCAATTTCTGCCATTTTTTCCCTTTTTTTTTCTTTTAAATAAACATGACGTCACTCAATAATTTCTGCCATTTTTTTCCTTTTTTTTTTAATTGGAATGTTTGCTTAATCTACCACACATAAAATAACTCACGTGTAAACTATGATATATATATCAAATATAATATATATGGTAAACTATGATATATAAGAACGAGAGATTGAGAATAAACGACATGCATTAAAATATTAAAATATTAATATATTTTTATTGAAAAGGGATACTTGTGGCTAGTATTGTAAGAGAATATTATCAAATTTAAAAATAAATAAATTATATTTTTATGGATGTCATTATTTTCTGCAATTATAAAACATTAACTTAAATTTTGTAGATTATTAAAATTGTCACTCTTAAAATCAAAATATATTATTAATTAAAAAAATATAAATAAAATAACTCACGTGTTTATATTTTATTTAAATTTCACAGCCAATTATTATAATTTTAAAATTGAAATATAGACCTAAAAATAGTAAATCTGGTTTGATTTTTTTTTTATTAATCTAGATGGCACATGTGCATTACATACTCTAAATAGACATATCTCGTTTTCAATATTTAATATATATTTAAATAACTTAAAATAAGCTCAAATGAATGTAGATATTTCGAATAGTTTATTACTTATTGTACTCGTTTTTAATTTAAAAATATATTATTACAACATGTGTGTTTAAATTATAAAATTAAAAGTAGATTATTGACAAAACGATTAAATTTTATTTTATTATTGTTTTATTGAAAATTAAATTATTTAAATAACATTTTTAAAGTTTAAATATTTAAAATTAACTTTTTTTTTATCAATTTTAAATTACACGTTCCTAAATATGTGGAAGATTTTTTAGTTAAATTTTTGTATTTAATTCTGAAAATTGATACTTAAAATTATAAAAGATGAAAAGATAGGACTTAAAAAATAAAAAATAGCATTTTAGTTTAATTTCAAATAAAAAAAATGAAAATAGGTTGAAGATATGCATAGACTTTAAAAATAAAACTAATAATAAATAGCGTATTTTTATATAACTTTTCGAATAAGGAACTTATATACATGAAAGAAAAAAAAAAGAATATAAAGTCATTTTACAAAAAAAAAAAAAATAATAATAATTGAAGAAAATTCAAAATTCTATACTTTGAATATTGATACTAATTACAATTAAATAAAATTGACTATTAAAATAATTAGTCAACACATCACTTTTCATTTTCAAAATATTCATATTCTTAAAGATTATAACTCTGCAGTCTATCAAATTTATCAAAAATTAAAGAACATATGGTATGATTTTTATTTTTTTTTTAAGATTGTATTTTTCTTATAGGATAAAATTAAAATTAAAAATATTAAATTTTATAGAATTATAAAAGACATAGTCGTTTAATTTTAAATGTAATGATCGTAGAATTAATTTAATAATATTTCTTTCCTTTTAGAATAAATATATCTTATTTTGGAATATTATGATTAATATTTTTATTATTTTAAAGTATAAACGAAAAACGTGTGTAGTTTATTAATATAACTTAGGCTCTTGAAAGTGCAGCATTTATTTGTTTCTTTATTTTGGTTATTTTAACTTGGAAGGTGGGAGTCTTTCCTCTGCTCGCCGTCCCACCGTGTTAGGGTGGGTCTAATTATTTTAGAGAAGTATTCTTAAAAAAAAAAAAAAAAAAAATTAAGTACCAAATTAGGAAATGATCACTACGTTTTTTTAGTGGAAATGAATTTTTTTTATATATCATAATTACAAGAATACTCGTGTAAATTTTTTTATAAACGAGTGTAAAATATTTTTAATTGAAATGATTTAAATTAAAAGTCGTAGATTCATTTTAATATACTTTAAATTTATCCTTATCTTCTAATATATAAAAAATATTTGAAAATAATTGAAAATTGAAATAAAAAATTTGAAATGAGAGAGAATAAATTAAAACTGTGAAATTTTAATTTATAAATTAAATTAAGCCTTGAAATTTGATTTAAAATTGTTAAAGAAAAAAGGAAGACGGTTGGAGAGAAAGAAAATAAAAGAAAATAAGAGAAAAAGAAAGAAATTTACCCGCCAGATTTATGCAATGGACAGTTTGCCGTTGCGAAGGCGAGGAAAGGAGGGGAAAATAAATAAATTTTAAAAAAATAAAAATAAATGGAGGTTGAATCTTCGCCTTCTATTGTTCATCGGCGAAACTGATCGCCGCCGTCCCATCCAGCAGTAATCGTGAACCACAATCTCTCTCTTATAAGCGTTTTCCACGTGGTGCAAACTCACAATCTGTGTTCGAAGATGATTCAGATTCAGCAACCGGAACGAGAAATCTAACCACGAGGCCTCCGCCCAATTTCCGGTGGATAGGGAATCGAAAATTAGGGTTACGATTCCATTTTCCCGAATCATGTGTGATAACTATGATTCTGGGTTCGAATTCAATCTCCTCTACTCTTCATTTGTTTTGGGAATTTAGATTTGTTCTTTCTCTTTCTCCGTCTCTCCCCTCTGCTTCAATTTCCCAATGCGACAGCTCCTAA

mRNA sequence

ATGGCTCAAAGCGGCGTCCTTTCCAAGACTTTGGATCTGATCTCATCGTTCGGTCTTGATACGAACAAGAGGAAGAACAGGGATTGTGATGATGAGCCGAGGAGGAAGAGGCGAAGAGAGATGGTGTTTTCGAGTACGGTGGAGATGCCGGCGGCGCTGCGACAGAGGATTGAAGCAATGGGAGGCACCGACGTACAAATAGTGATGCAGAAGCAATTGCAAGAAAGTGATCGGAACAAGAACCATGGCCGGTTGTTGATTCCGACGAAGAAGCTGATGAACGAATTCGCGACGGAGGAGGAGGCGGAGTTGATGATGCAAGAAGAGGTTGATCGGAGGAGGAGGATGAGGATCGGAATGGAGGTGGCGATAATAGATGCAGCGCTGAGAGAGAGCGTAATTGGCTTGAAATTGTGGAAGATTGGAAGCGGCCATAACTACTGCTTGGCATCTCAATGGAATTCTTTCGCCGAACAAAACTCATTGGAAAGTGGCGATTACATCCAACTCTGGAGTTTCCGATCAAACAATAATGCTTTTATAGTTAACGATTCAGCAACCGGAACGAGAAATCTAACCACGAGGCCTCCGCCCAATTTCCGGTGGATAGGGAATCGAAAATTAGGGTTACGATTCCATTTTCCCGAATCATGTGTGATAACTATGATTCTGGGTTCGAATTCAATCTCCTCTACTCTTCATTTGTTTTGGGAATTTAGATTTGTTCTTTCTCTTTCTCCGTCTCTCCCCTCTGCTTCAATTTCCCAATGCGACAGCTCCTAA

Coding sequence (CDS)

ATGGCTCAAAGCGGCGTCCTTTCCAAGACTTTGGATCTGATCTCATCGTTCGGTCTTGATACGAACAAGAGGAAGAACAGGGATTGTGATGATGAGCCGAGGAGGAAGAGGCGAAGAGAGATGGTGTTTTCGAGTACGGTGGAGATGCCGGCGGCGCTGCGACAGAGGATTGAAGCAATGGGAGGCACCGACGTACAAATAGTGATGCAGAAGCAATTGCAAGAAAGTGATCGGAACAAGAACCATGGCCGGTTGTTGATTCCGACGAAGAAGCTGATGAACGAATTCGCGACGGAGGAGGAGGCGGAGTTGATGATGCAAGAAGAGGTTGATCGGAGGAGGAGGATGAGGATCGGAATGGAGGTGGCGATAATAGATGCAGCGCTGAGAGAGAGCGTAATTGGCTTGAAATTGTGGAAGATTGGAAGCGGCCATAACTACTGCTTGGCATCTCAATGGAATTCTTTCGCCGAACAAAACTCATTGGAAAGTGGCGATTACATCCAACTCTGGAGTTTCCGATCAAACAATAATGCTTTTATAGTTAACGATTCAGCAACCGGAACGAGAAATCTAACCACGAGGCCTCCGCCCAATTTCCGGTGGATAGGGAATCGAAAATTAGGGTTACGATTCCATTTTCCCGAATCATGTGTGATAACTATGATTCTGGGTTCGAATTCAATCTCCTCTACTCTTCATTTGTTTTGGGAATTTAGATTTGTTCTTTCTCTTTCTCCGTCTCTCCCCTCTGCTTCAATTTCCCAATGCGACAGCTCCTAA

Protein sequence

MAQSGVLSKTLDLISSFGLDTNKRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAMGGTDVQIVMQKQLQESDRNKNHGRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKIGSGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDSATGTRNLTTRPPPNFRWIGNRKLGLRFHFPESCVITMILGSNSISSTLHLFWEFRFVLSLSPSLPSASISQCDSS

Homology

[Close]

BLAST of CmaCh05G002410 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-09
Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 26  NRDCDDEPRRKRRR--EMVFSSTVEMPAALRQRIEAMGGT-DVQIVMQKQLQESDRNKNH 85
           +R   + PRRK+    E V     + P  L Q +  M G  D +++++K L  +D +   
Sbjct: 138 DRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQ 197

Query: 86  GRLLIPTKK-LMNEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKI 145
            RL IP    + N+F T +E+ L+ ++E+     M  G+   ++D   ++  +G K W +
Sbjct: 198 NRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNM--GVAAFLVDQRTKKWNMGFKQWFM 257

Query: 146 ----GSGH-NYCLASQWNSFAEQNSLESGDYIQLWSFRSNN 178
               GS + ++ L  +W++  E N L+ GD I LWSFRSN+
Sbjct: 258 TTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSND 296

[Close]

BLAST of CmaCh05G002410 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-08
Identity = 53/172 (30.81%), Postives = 83/172 (48.26%), Query Frame = 0


Query: 16  SFGLDTNKRKNRDCDDEPRR----KRRREMVFSSTV-EMPAALRQRIEAM-GGTDVQIVM 75
           S  L  NK + R   ++ +R    K+ +   FS T  E P  L   +  M    D +++ 
Sbjct: 158 SLCLTENKNRKRRAVEQRKRTGGVKKAKVAPFSQTARETPEWLVNVMRDMKEAKDAKLIF 217

Query: 76  QKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAA 135
           +K L  +D N    RL +P   L+ N+F T  E+ ++   + D +   +IG+   ++D  
Sbjct: 218 EKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRII---DKDIKNDKKIGVGAILVDQR 277

Query: 136 LRESVIGLKLWKI----GSGH-NYCLASQWNSFAEQNSLESGDYIQLWSFRS 176
            ++  + LK W++    G G  NY L   WN   E N L+ GD I LWSFRS
Sbjct: 278 CKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFRS 326

[Close]

BLAST of CmaCh05G002410 vs. ExPASy Swiss-Prot
Match: Q9FFX2 (B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38490 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.4e-08
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 48  EMPAALRQRIEAMG--GTDVQIVMQKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAEL 107
           EMP  + Q +  M       +++ ++ L +SD N N  RLL+P +KL+ N+F T  E   
Sbjct: 217 EMPEWIFQVMRYMNADAETPRLIFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRA 276

Query: 108 MMQ-EEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKI--GSGH---NYCLASQWNSFAE 167
           M + E+ D      IG+   +++   ++  +  K+W +   SGH   NY L   WN   +
Sbjct: 277 MQKDEDNDEEDDENIGVGTVLVNQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVK 336

Query: 168 QNSLESGDYIQLWSFR 175
            +SL+ GD I LW+FR
Sbjct: 337 SSSLKVGDKISLWTFR 352

[Close]

BLAST of CmaCh05G002410 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 64  DVQIVMQKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAELMMQEEVDRRRRMRIGMEV 123
           D +++ +K L  +D N    RL +P   L+ N+F T  E+ ++ +   D     +IG+  
Sbjct: 225 DAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKE---DINNNKKIGVGA 284

Query: 124 AIIDAALRESVIGLKLWKI----GSGH-NYCLASQWNSFAEQNSLESGDYIQLWSFR 175
            ++D    +  + LK W++    G G  NY L   WN   E N L+ GD I +WSFR
Sbjct: 285 ILVDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFR 338

[Close]

BLAST of CmaCh05G002410 vs. ExPASy Swiss-Prot
Match: Q9FFX1 (B3 domain-containing protein At5g38500 OS=Arabidopsis thaliana OX=3702 GN=At5g38500 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06
Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 66  QIVMQKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAELMMQ----------------- 125
           +++ ++ L +SD N N  RLLIP +KL+ N+F T EE   M +                 
Sbjct: 265 KLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVC 324

Query: 126 ---EEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKI--GSGH---NYCLASQWNSFAEQ 175
              +E + +    IG    +++   +   +  K+W +   SGH   NY L   WN   + 
Sbjct: 325 QAKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKG 384

[Close]

BLAST of CmaCh05G002410 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10
Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 26  NRDCDDEPRRKRRR--EMVFSSTVEMPAALRQRIEAMGGT-DVQIVMQKQLQESDRNKNH 85
           +R   + PRRK+    E V     + P  L Q +  M G  D +++++K L  +D +   
Sbjct: 138 DRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQ 197

Query: 86  GRLLIPTKK-LMNEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKI 145
            RL IP    + N+F T +E+ L+ ++E+     M  G+   ++D   ++  +G K W +
Sbjct: 198 NRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNM--GVAAFLVDQRTKKWNMGFKQWFM 257

Query: 146 ----GSGH-NYCLASQWNSFAEQNSLESGDYIQLWSFRSNN 178
               GS + ++ L  +W++  E N L+ GD I LWSFRSN+
Sbjct: 258 TTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSND 296

[Close]

BLAST of CmaCh05G002410 vs. TAIR 10
Match: AT5G38490.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 59.3 bits (142), Expect = 5.3e-09
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 48  EMPAALRQRIEAMG--GTDVQIVMQKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAEL 107
           EMP  + Q +  M       +++ ++ L +SD N N  RLL+P +KL+ N+F T  E   
Sbjct: 217 EMPEWIFQVMRYMNADAETPRLIFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRA 276

Query: 108 MMQ-EEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKI--GSGH---NYCLASQWNSFAE 167
           M + E+ D      IG+   +++   ++  +  K+W +   SGH   NY L   WN   +
Sbjct: 277 MQKDEDNDEEDDENIGVGTVLVNQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVK 336

Query: 168 QNSLESGDYIQLWSFR 175
            +SL+ GD I LW+FR
Sbjct: 337 SSSLKVGDKISLWTFR 352

[Close]

BLAST of CmaCh05G002410 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 55.5 bits (132), Expect = 7.6e-08
Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 64  DVQIVMQKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAELMMQEEVDRRRRMRIGMEV 123
           D +++ +K L  +D N    RL +P   L+ N+F T  E+ ++ +   D     +IG+  
Sbjct: 225 DAKLIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKE---DINNNKKIGVGA 284

Query: 124 AIIDAALRESVIGLKLWKI----GSGH-NYCLASQWNSFAEQNSLESGDYIQLWSFR 175
            ++D    +  + LK W++    G G  NY L   WN   E N L+ GD I +WSFR
Sbjct: 285 ILVDQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFR 338

[Close]

BLAST of CmaCh05G002410 vs. TAIR 10
Match: AT5G38500.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07
Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 66  QIVMQKQLQESDRNKNHGRLLIPTKKLM-NEFATEEEAELMMQ----------------- 125
           +++ ++ L +SD N N  RLLIP +KL+ N+F T EE   M +                 
Sbjct: 265 KLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVC 324

Query: 126 ---EEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKI--GSGH---NYCLASQWNSFAEQ 175
              +E + +    IG    +++   +   +  K+W +   SGH   NY L   WN   + 
Sbjct: 325 QAKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKG 384

[Close]

BLAST of CmaCh05G002410 vs. TAIR 10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-07
Identity = 49/167 (29.34%), Postives = 81/167 (48.50%), Query Frame = 0


Query: 19  LDTNKRKNRDCDDEPRR---KRRREMVFSSTV-EMPAALRQRIEAM-GGTDVQIVMQKQL 78
           ++   RK R  +   R    K+     FS T  E P  L + +  M    D +++ +K L
Sbjct: 165 MENTSRKRRAVEQRKRSGGVKKANVAPFSQTARETPEWLVKVMTNMKEAKDAKLIFEKTL 224

Query: 79  QESDRNKNHGRLLIPTKKLM-NEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAALRES 138
             +D N    RL +P   L+ N+F T  E+ +++ E+++     +IG+   ++D   ++ 
Sbjct: 225 FVTDVNPTKNRLSMPFNNLLRNDFLTSVES-IIINEDINNNN--KIGVGAILVDQRCKKW 284

Query: 139 VIGLKLWKI----GSGH-NYCLASQWNSFAEQNSLESGDYIQLWSFR 175
            + LK W++    G G  +Y L   WN   E N L+ GD I LWSFR
Sbjct: 285 GVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFR 328

The following BLAST results are available for this feature:

BLAST of CmaCh05G002410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RM09	2.3e-09	30.43	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	4.4e-08	30.81	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9FFX2	7.4e-08	32.35	B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]
Q9LRX6	1.1e-06	31.62	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FFX1	3.1e-06	30.37	B3 domain-containing protein At5g38500 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]

BLAST of CmaCh05G002410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05920.1	1.6e-10	30.43	Domain of unknown function (DUF313)	[more]
AT5G38490.1	5.3e-09	32.35	Domain of unknown function (DUF313)	[more]
AT3G24850.1	7.6e-08	31.62	Domain of unknown function (DUF313)	[more]
AT5G38500.1	2.2e-07	30.37	Domain of unknown function (DUF313)	[more]
AT5G24050.1	3.8e-07	29.34	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 59..191 e-value: 4.4E-16 score: 60.7
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 69..182
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 48..155 e-value: 5.7E-18 score: 65.2
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 26..178
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 26..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G002410.1	CmaCh05G002410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding