CmaCh05G000610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G000610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CAAX amino terminal protease
Location	Cma_Chr05: 246040 .. 249176 (-)
RNA-Seq Expression	CmaCh05G000610
Synteny	CmaCh05G000610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTAGTTTACCGAAGAAACCCCTTTCCTTATAAGAAAAATGGCAAGCTCTTATTAGGCGCCATTTCAACGCCCCACCCAAAATTCCTCCCGTTCTTTCGGCCTCAGTTTATCCTCTACTTCAATTTTGTTGCTAAACCCAGTTCAGTTCAACCTCGACTGGAACTGGAAAAGTAATTTCGTGATGAATTTGCTCACTATCAACTGTCGTTGCAAATCAACGAACGCTGCTTCCACCTTCAATCCACTCACATGGCGGAATTCTACCTTTATCGGTAAGTCTGCTAACTCGGCTTCGGTCACTTTTTCACTTGTTAAATCGCTCTTGTTCTTCAATAAAAACGCCAACCCTAAAATTGAATCAGCTAACAATTCAATCAACGTCTTTCCAAATTCTTGAATCAATGGCGATTCGCGCCATGCTTGATTCATTTGTAAGGATTATATTCTTCTTTAAATTGTTTAAATACGGCTGTGTTTCGTTAGGTAGGAAGGTTACTGGGCTCATTGATGTACAGAGGGTTCTTCCCACAGGATTATGGAGTGTAAGATTTGCAATGTTCGTTTTTCTCTGATTATATGTTTTTTTCTTTTTGCCCTTTAAGATAGCAGCCCTTTTTTGGGTGTAGAGGTCAAATGCAAAGCCAAAGGTTCATGCAAAGCGGAAACCCGCGAGGAAGCTTGAAAGAACGGGAGAGGAAGTTTCTATACCGTCCTCTTCTGTTGATGATAATGCTCAAGATATGAAGATGAACTCTTCGGACAGTTCATCTAAGAACCGCTTGATTAATATCTCCTCAAGGAGTTCTGTGGTTCAGGCTTGCATAATTACTTCTGGTTTGATTGCTGCTTTGGGAGTAATAATTCGACAGGTGACGCATACCAAGCCAAACATAAACTTTTGTTGGTGTTCATTTCTTGATTTAGGATAGTCATTCTAATCACGTAGGGAAAGTGGAGCATGATTTTAAAAGTTGAGACATGTTCCTTATGCTATAGCTGTAGATTTGTTTTACGACTGATTACTGGCCTTTATGATGGATATAATTAGTGTCTTGACGTATTGGAAAGACTATCAATGGCGATTTAAGATCTGTTTTAATGTTTTAGGTATCTCATGTTGCATCGATAGAGGGATTGCCAGTGATTGACTGCACCTCAGAAGTATCATGTAGGACTTCCAAGTTCATTTATCCCTTCTTGCTAATTTACTATTCATCTTGAAGAGAGAGTGTTTGTAATAGTCCAAGCCAACCGCTATAAGATATTGTCCTCTTTAGGCTTTTCTTTCTAGGCTTCCTCTCAAGGTTTGATAACGCGTATGCTTGGGAGAGGTTTCCACACTCTTATAAGGAATGTTTCGTTTCCCTCTCTAGCCGATGTGGGATCTTACAATCCACCCTCCTTAGGGGCTCACTGTCCCTATCAGCACACCGCCCTTGAAGGGAAGGTATAAAGAGGACAATATTTTCTAGGGGTGGGCTTGTGCTGTTACAAATGGTATCAGGGTCAGACACCGGGCATGTGCCAGCGAGGACGTTGCACCTTCAACGGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAAGGGAATAAAATATTTCTTGTAAGAATGTGGAAATCTCTCCCTAGTAGACACGTTTTAAAACCTTGAGAGGAAGTCATTGAAGGGAAAGCCCAAAAAAGACAATATACACTAGCGGTGGGGTGGGCTTGAGGCTATTACACTTTTTTTTGTCACCTCATTGATTCTCGGTGTCATTTCTATTCAATACAAACTATTTTGAAAGCTTTGAAAGAATGGTTAGAATTGGAACCACAATCTTCTTTTACATTCTCTTGGATTTCGTAGTTATGGACTGAGTGACTATGAAATCCAGAAAAATAACAATATTGATATGGATTACAATATTTAACTTATGTACTCCATTCTGGCAGTTAGTTTTGAGATGAGGCAACTTCAGTTGATTACAGGACTGGTTGTTCTAATATCTTCATCCCGATTTTTACTGTTGAAACTATGGCCAGACTTCGCCGAGTCTAGTGAAGCAGCGAATCGACAGGTAGCTGGTTGTTTAGTTTTAATCTGTAAATCTAGAGGCAGCAAGAGCTGAAAAATGTTTTTGCTGCGAACTTATAAATCATTTGAAAATACTCCACAACTCCCAGTGCAGGTGCTCACTTCTCTTCAACCCATAGATTATGCGCTAGTTGCGTTTTTGCCCGGCATTAGTGAGGTGAGTAAAGTATATCAACACTCTCTCATTTTCTTCTAAATCTATTTTCAAGTAACACTATACGCCTCCTCTGTGAACCTTAGGAGTTGCTTTTCCGTGGCGCATTGATACCGCTCTTGGGATTCAACTGGGCAAGTGTCATGTTGACAGCCGCCATTTTTGGCATTCTACACTTGGGGGGTGGCCGGAAGTATTCATTTGCAATATGGTATTCATATCTCTATCTGAACTTCATATCATAATGTAGAAACTCTATGTTCAGCAATAGATCATGAATCAAATCATATGGCTTTGCTCTTACAATATGCCGATGGTTAAAAACTGCTTACTTTTCGTTGCATCCATTTTATTTGGCAGGGCAAGTTTTGTCGGACTTGCATATGGTTATGCGACTATCGAATCCTCCAGCGTCGTTGTGCCTATGGCTTCTCATGCATTGAATAATTTGGTTGGAGGAATTCTTTGGCGCTACCAATCAATGAATTTGGAGAATGGTGAAGATCAAAAATGATGATGATGAATTTCTTGATTTATAGATATTTGCTTGGATAAGCATCTGTGACAAATTCATTCAATCAATGGGTAGATAAGTATTATTCATTTGGGACTTTAAAAACTCGCATGAATTCTCCACCACAAGCCAAAATAGAACGAATAAGAAGACAATTAAGAGAGGCAGGTTGGCCAATTAGTTGGCCAGTTGCTTGTAATTGGAGAGTATAGGTGGCAGCTCAGGATGGTCATATGCTTGGCTAATTAGTTGGCCAGCGCCTCACCTACCAAGTTTGATGGTTGTGCCCAAAATAATTTAATATGCCCATATCTCATAAATTGAATTTTGTAATTATACCACATTTATGGATGCTTCAAAATATTATACTTGTCAGATCTCTTTCTAAC

mRNA sequence

TTTTTAGTTTACCGAAGAAACCCCTTTCCTTATAAGAAAAATGGCAAGCTCTTATTAGGCGCCATTTCAACGCCCCACCCAAAATTCCTCCCGTTCTTTCGGCCTCAGTTTATCCTCTACTTCAATTTTGTTGCTAAACCCAGTTCAGTTCAACCTCGACTGGAACTGGAAAAGTAATTTCGTGATGAATTTGCTCACTATCAACTGTCGTTGCAAATCAACGAACGCTGCTTCCACCTTCAATCCACTCACATGGCGGAATTCTACCTTTATCGGTAGGAAGGTTACTGGGCTCATTGATGTACAGAGGGTTCTTCCCACAGGATTATGGAGTAGGTCAAATGCAAAGCCAAAGGTTCATGCAAAGCGGAAACCCGCGAGGAAGCTTGAAAGAACGGGAGAGGAAGTTTCTATACCGTCCTCTTCTGTTGATGATAATGCTCAAGATATGAAGATGAACTCTTCGGACAGTTCATCTAAGAACCGCTTGATTAATATCTCCTCAAGGAGTTCTGTGGTTCAGGCTTGCATAATTACTTCTGGTTTGATTGCTGCTTTGGGAGTAATAATTCGACAGGTATCTCATGTTGCATCGATAGAGGGATTGCCAGTGATTGACTGCACCTCAGAAGTATCATTTAGTTTTGAGATGAGGCAACTTCAGTTGATTACAGGACTGGTTGTTCTAATATCTTCATCCCGATTTTTACTGTTGAAACTATGGCCAGACTTCGCCGAGTCTAGTGAAGCAGCGAATCGACAGGTGCTCACTTCTCTTCAACCCATAGATTATGCGCTAGTTGCGTTTTTGCCCGGCATTAGTGAGGAGTTGCTTTTCCGTGGCGCATTGATACCGCTCTTGGGATTCAACTGGGCAAGTGTCATGTTGACAGCCGCCATTTTTGGCATTCTACACTTGGGGGGTGGCCGGAAGTATTCATTTGCAATATGGGCAAGTTTTGTCGGACTTGCATATGGTTATGCGACTATCGAATCCTCCAGCGTCGTTGTGCCTATGGCTTCTCATGCATTGAATAATTTGGTTGGAGGAATTCTTTGGCGCTACCAATCAATGAATTTGGAGAATGGTGAAGATCAAAAATGATGATGATGAATTTCTTGATTTATAGATATTTGCTTGGATAAGCATCTGTGACAAATTCATTCAATCAATGGGTAGATAAGTATTATTCATTTGGGACTTTAAAAACTCGCATGAATTCTCCACCACAAGCCAAAATAGAACGAATAAGAAGACAATTAAGAGAGGCAGGTTGGCCAATTAGTTGGCCAGTTGCTTGTAATTGGAGAGTATAGGTGGCAGCTCAGGATGGTCATATGCTTGGCTAATTAGTTGGCCAGCGCCTCACCTACCAAGTTTGATGGTTGTGCCCAAAATAATTTAATATGCCCATATCTCATAAATTGAATTTTGTAATTATACCACATTTATGGATGCTTCAAAATATTATACTTGTCAGATCTCTTTCTAAC

Coding sequence (CDS)

ATGAATTTGCTCACTATCAACTGTCGTTGCAAATCAACGAACGCTGCTTCCACCTTCAATCCACTCACATGGCGGAATTCTACCTTTATCGGTAGGAAGGTTACTGGGCTCATTGATGTACAGAGGGTTCTTCCCACAGGATTATGGAGTAGGTCAAATGCAAAGCCAAAGGTTCATGCAAAGCGGAAACCCGCGAGGAAGCTTGAAAGAACGGGAGAGGAAGTTTCTATACCGTCCTCTTCTGTTGATGATAATGCTCAAGATATGAAGATGAACTCTTCGGACAGTTCATCTAAGAACCGCTTGATTAATATCTCCTCAAGGAGTTCTGTGGTTCAGGCTTGCATAATTACTTCTGGTTTGATTGCTGCTTTGGGAGTAATAATTCGACAGGTATCTCATGTTGCATCGATAGAGGGATTGCCAGTGATTGACTGCACCTCAGAAGTATCATTTAGTTTTGAGATGAGGCAACTTCAGTTGATTACAGGACTGGTTGTTCTAATATCTTCATCCCGATTTTTACTGTTGAAACTATGGCCAGACTTCGCCGAGTCTAGTGAAGCAGCGAATCGACAGGTGCTCACTTCTCTTCAACCCATAGATTATGCGCTAGTTGCGTTTTTGCCCGGCATTAGTGAGGAGTTGCTTTTCCGTGGCGCATTGATACCGCTCTTGGGATTCAACTGGGCAAGTGTCATGTTGACAGCCGCCATTTTTGGCATTCTACACTTGGGGGGTGGCCGGAAGTATTCATTTGCAATATGGGCAAGTTTTGTCGGACTTGCATATGGTTATGCGACTATCGAATCCTCCAGCGTCGTTGTGCCTATGGCTTCTCATGCATTGAATAATTTGGTTGGAGGAATTCTTTGGCGCTACCAATCAATGAATTTGGAGAATGGTGAAGATCAAAAATGA

Protein sequence

MNLLTINCRCKSTNAASTFNPLTWRNSTFIGRKVTGLIDVQRVLPTGLWSRSNAKPKVHAKRKPARKLERTGEEVSIPSSSVDDNAQDMKMNSSDSSSKNRLINISSRSSVVQACIITSGLIAALGVIIRQVSHVASIEGLPVIDCTSEVSFSFEMRQLQLITGLVVLISSSRFLLLKLWPDFAESSEAANRQVLTSLQPIDYALVAFLPGISEELLFRGALIPLLGFNWASVMLTAAIFGILHLGGGRKYSFAIWASFVGLAYGYATIESSSVVVPMASHALNNLVGGILWRYQSMNLENGEDQK

Homology

[Close]

BLAST of CmaCh05G000610 vs. TAIR 10
Match: AT3G26085.1 (CAAX amino terminal protease family protein )

HSP 1 Score: 268.1 bits (684), Expect = 8.8e-72
Identity = 147/253 (58.10%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 57  KVHAKRKPARKLER-------------TGEEVSIPSSSVDDNAQDMKMNSSDSSSKNRLI 116
           +  + RK  +KL+R             T EEVS P        ++ +++SS S     + 
Sbjct: 41  RASSSRKSLKKLKRESQQGKDIGLRNVTDEEVSSP------RFEEAQVDSSTSKDSIDVF 100

Query: 117 NISSRSSVVQACIITSGLIAALGVIIRQVSHVASIEGLPVIDCTSEVSFSFEMRQLQLIT 176
             + R  V+QAC +TSGL+AALG+IIR+ SHVAS EGL V DC+ +V F FE   L LI 
Sbjct: 101 VAAPRDKVLQACTVTSGLMAALGLIIRKASHVASTEGLLVPDCSIDVPFGFETWHLGLIA 160

Query: 177 GLVVLISSSRFLLLKLWPDFAESSEAANRQVLTSLQPIDYALVAFLPGISEELLFRGALI 236
           G+VV ISSSRFLLLK WPDFA+SSEAANRQ+LTSL+P+DY +VA LPGISEELLFRGAL+
Sbjct: 161 GIVVFISSSRFLLLKSWPDFADSSEAANRQILTSLEPLDYLVVAMLPGISEELLFRGALM 220

Query: 237 PLLGFNWASVMLTAAIFGILHLGGGRKYSFAIWASFVGLAYGYATIESSSVVVPMASHAL 296
           PL G NW  ++    IFG+LHLG GRKYSFA+WAS VG+ YGYA + SSS++VPMASHAL
Sbjct: 221 PLFGTNWNGIVAVGLIFGLLHLGSGRKYSFAVWASIVGIVYGYAAVLSSSLIVPMASHAL 280

[Close]

BLAST of CmaCh05G000610 vs. TAIR 10
Match: AT3G26085.2 (CAAX amino terminal protease family protein )

HSP 1 Score: 268.1 bits (684), Expect = 8.8e-72
Identity = 147/253 (58.10%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 57  KVHAKRKPARKLER-------------TGEEVSIPSSSVDDNAQDMKMNSSDSSSKNRLI 116
           +  + RK  +KL+R             T EEVS P        ++ +++SS S     + 
Sbjct: 70  RASSSRKSLKKLKRESQQGKDIGLRNVTDEEVSSP------RFEEAQVDSSTSKDSIDVF 129

Query: 117 NISSRSSVVQACIITSGLIAALGVIIRQVSHVASIEGLPVIDCTSEVSFSFEMRQLQLIT 176
             + R  V+QAC +TSGL+AALG+IIR+ SHVAS EGL V DC+ +V F FE   L LI 
Sbjct: 130 VAAPRDKVLQACTVTSGLMAALGLIIRKASHVASTEGLLVPDCSIDVPFGFETWHLGLIA 189

Query: 177 GLVVLISSSRFLLLKLWPDFAESSEAANRQVLTSLQPIDYALVAFLPGISEELLFRGALI 236
           G+VV ISSSRFLLLK WPDFA+SSEAANRQ+LTSL+P+DY +VA LPGISEELLFRGAL+
Sbjct: 190 GIVVFISSSRFLLLKSWPDFADSSEAANRQILTSLEPLDYLVVAMLPGISEELLFRGALM 249

Query: 237 PLLGFNWASVMLTAAIFGILHLGGGRKYSFAIWASFVGLAYGYATIESSSVVVPMASHAL 296
           PL G NW  ++    IFG+LHLG GRKYSFA+WAS VG+ YGYA + SSS++VPMASHAL
Sbjct: 250 PLFGTNWNGIVAVGLIFGLLHLGSGRKYSFAVWASIVGIVYGYAAVLSSSLIVPMASHAL 309

[Close]

BLAST of CmaCh05G000610 vs. TAIR 10
Match: AT3G26085.3 (CAAX amino terminal protease family protein )

HSP 1 Score: 268.1 bits (684), Expect = 8.8e-72
Identity = 147/253 (58.10%), Postives = 181/253 (71.54%), Query Frame = 0


Query: 57  KVHAKRKPARKLER-------------TGEEVSIPSSSVDDNAQDMKMNSSDSSSKNRLI 116
           +  + RK  +KL+R             T EEVS P        ++ +++SS S     + 
Sbjct: 61  RASSSRKSLKKLKRESQQGKDIGLRNVTDEEVSSP------RFEEAQVDSSTSKDSIDVF 120

Query: 117 NISSRSSVVQACIITSGLIAALGVIIRQVSHVASIEGLPVIDCTSEVSFSFEMRQLQLIT 176
             + R  V+QAC +TSGL+AALG+IIR+ SHVAS EGL V DC+ +V F FE   L LI 
Sbjct: 121 VAAPRDKVLQACTVTSGLMAALGLIIRKASHVASTEGLLVPDCSIDVPFGFETWHLGLIA 180

Query: 177 GLVVLISSSRFLLLKLWPDFAESSEAANRQVLTSLQPIDYALVAFLPGISEELLFRGALI 236
           G+VV ISSSRFLLLK WPDFA+SSEAANRQ+LTSL+P+DY +VA LPGISEELLFRGAL+
Sbjct: 181 GIVVFISSSRFLLLKSWPDFADSSEAANRQILTSLEPLDYLVVAMLPGISEELLFRGALM 240

Query: 237 PLLGFNWASVMLTAAIFGILHLGGGRKYSFAIWASFVGLAYGYATIESSSVVVPMASHAL 296
           PL G NW  ++    IFG+LHLG GRKYSFA+WAS VG+ YGYA + SSS++VPMASHAL
Sbjct: 241 PLFGTNWNGIVAVGLIFGLLHLGSGRKYSFAVWASIVGIVYGYAAVLSSSLIVPMASHAL 300

The following BLAST results are available for this feature:

BLAST of CmaCh05G000610 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh05G000610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26085.1	8.8e-72	58.10	CAAX amino terminal protease family protein	[more]
AT3G26085.2	8.8e-72	58.10	CAAX amino terminal protease family protein	[more]
AT3G26085.3	8.8e-72	58.10	CAAX amino terminal protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003675	Type II CAAX prenyl endopeptidase Rce1-like	PFAM	PF02517	CPBP	coord: 203..287 e-value: 2.2E-14 score: 53.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..100
None	No IPR available	PANTHER	PTHR43592	CAAX AMINO TERMINAL PROTEASE	coord: 51..296
None	No IPR available	PANTHER	PTHR43592:SF7	CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN	coord: 51..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G000610.1	CmaCh05G000610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071586	CAAX-box protein processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0004222	metalloendopeptidase activity