Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACATAAAGAAAACAATCCCATATTAAATCAGTGTATTAAGTGTTAAATAATAAATTGATGATCCAACTAAAGTTTGGGATTTGAAATCAACACATATAGACGCGTACGGGTTTGGTTGCAATTCGGAAGAAGCAGTAGAGATAGCAGCAACAGAAGTCCAAATAAGTAAAGAAAAGGCCATAAATATAATATTTGGGTGTCTGGAAACCACTATAAATTTCTGCCTACAATTGCAACCGCACGCCAACATTCCCAAATCTCACCCCCTCTCCTCTCCTCTCCTCCTCCGTGGAATACTAAAAACAAAACTCTTCAGAGAAATGCATACATTACCCGCGCCCCTTCTGGTTCTCCTCTATCTCTTTATCTTCTTGCTTTCACCGCTCAATGTAAGTCCATATCCATCTCTGTTTATTTCTCTTTACTTTACTTTGAGCTTTTAATCCCTCTGCTGCTGCTGCTGCTGCTGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTCCTCATCCCTGAGTGTATTGTGAATTGTAAATTGTAATGTATGGTCCTGGAAACAGGTTCCCGCGGCCGCCGACGAGGACAACCCCTTCACCCCAAAAGCTTTTCTGAATCGTTATTGGAACAAGGAGGTGCGGAATGATATGCCAAAACCCACTTTTCTCTTCTCCAAGGTCTCTCCCTTGACGGCAGTGCAGTCGGCGGCCTTCGCCAAACTTGCAGCTCAAAATGCTCTCTCCTCCCGACTCCCCGAGTTCTGCTCCGCCGCTAACTTGCTTTGCTTTCCTGATTTATCCCCCTCTTTGGCCAAGCACGACAGCACCTCCAACTTTGCCGTGTATTCCAATAAGAACTTCACCACTTACGGCACCCAAAGATCTGGTGGAATCGACTCCTTCAAAAACTATTCCAATGGTGACAATGTGGTCGTCGATTCCTTCAGGCGCTATAGCCACGAGGCCCTGGGCCACACCGATCAATTTTCCACTTATGGCACTGATACCAACGTCCCCGACCAGAGCTTTAACACTTATGCCTCCAAAGCCGTCGGAGGCAACGGCGGGTTCACAACCTACGAACAATCCGTCAATGTCCCCAATCTCCGGTTCACCACCTACTCCAGTGATGCCACTGGAAGATCTCAATCCTTCAAGAGCTACAGCGAGAACGCAAACGCCGGAGATCAGTCGTTTGTCAACTATGGGAAACGGGGAAATGGGGGTCCGAACGAGTTCACTGGCTACGGGACCAACGCAAACGTAATAGGCTCAGGGTTTTCAAGCTACGGGGCAAACGGAAATGGTGCTAACGACACATTCACCAATTACGGCAACGAGCAGAACAACCCACAGAATAACTTCAGGAGCTATGGCGACGGTGGGAATGGAGCGATTGAAAGCTTCTCTAGTTACAGGGACCAGGCCAATGTGGGGGACGATTCATTCCAGTCCTACTCCAAAAACTCCAACTCTGCCAAGGTTAATTTCGCAAATTATGGGAAATCCTTCAACGAGGGTACGGACAAATTTAGTGGCTATGGTCAGAATGGGAATGGGCAAAGCGTGGGGTTCAAGACGTATGGGGTGAATACGACGTTCAAGGATTACGCAAAACAGGGAATTAGTTTTGCCAAGTACAGCAATGTGAGCTCTGGGGGCGCGAAAATGTCGGTGAGCGAAAGTTTGGCGAAGAGGTGGGTAGAGCCCGGGAAGTTCTTCCGGGAGTCGATGTTGAGGAAGGGGACGGTGGTGGCGATGCCGGACATCAGAGATAAAATGCCGAAGAGGTCGTTCTTGCCCCGATCTATTCTGTCCAAGCTACCCTTCTCGAGTTCGAAGCTGGAGGTGATGAAGCAGATATTCCACGCGGGGGATAACTCGTCGATGGAGACTATGATGACGGAGACGCTTAGGGACTGCGAGAGGACGCCCAGCGCCGGGGAGACGAAGCGGTGCGTGGGTTCGGTGGAGGATATGATAGACTTCGCGACGTCGGTGCTGGGGCGGAACGTGGTGGTCCGGACGACGGAGAACACGAAGGGGTCGAAGGGGAACATAATGATTGGGGCAGTGAAAGGGATTGAGGGAGGGAAGGTGACGGAGTCTGTGTCTTGCCACCAGAGCCTGTTCCCTTACCTCCTCTACTACTGCCACTCCGTGCCCAAAGTTCGGGTGTACGAGGCGGAGTTGCTGGATCCAACCTCCAAAGCCATCATCAACCACGGAGTTGCCATCTGTCACCTGGACACCTCGGCCTGGAGTCCCGCTCACGGGGCCTTCATAGCTCTCGGATCCGCCCCCGGTCGGGTGGAGGTGTGCCACTGGATCTTCGAGAATGACATGACGTGGAGTGTGGCGGACTGA
mRNA sequence
CACATAAAGAAAACAATCCCATATTAAATCAGTGTATTAAGTGTTAAATAATAAATTGATGATCCAACTAAAGTTTGGGATTTGAAATCAACACATATAGACGCGTACGGGTTTGGTTGCAATTCGGAAGAAGCAGTAGAGATAGCAGCAACAGAAGTCCAAATAAGTAAAGAAAAGGCCATAAATATAATATTTGGGTGTCTGGAAACCACTATAAATTTCTGCCTACAATTGCAACCGCACGCCAACATTCCCAAATCTCACCCCCTCTCCTCTCCTCTCCTCCTCCGTGGAATACTAAAAACAAAACTCTTCAGAGAAATGCATACATTACCCGCGCCCCTTCTGGTTCTCCTCTATCTCTTTATCTTCTTGCTTTCACCGCTCAATGTTCCCGCGGCCGCCGACGAGGACAACCCCTTCACCCCAAAAGCTTTTCTGAATCGTTATTGGAACAAGGAGGTGCGGAATGATATGCCAAAACCCACTTTTCTCTTCTCCAAGGTCTCTCCCTTGACGGCAGTGCAGTCGGCGGCCTTCGCCAAACTTGCAGCTCAAAATGCTCTCTCCTCCCGACTCCCCGAGTTCTGCTCCGCCGCTAACTTGCTTTGCTTTCCTGATTTATCCCCCTCTTTGGCCAAGCACGACAGCACCTCCAACTTTGCCGTGTATTCCAATAAGAACTTCACCACTTACGGCACCCAAAGATCTGGTGGAATCGACTCCTTCAAAAACTATTCCAATGGTGACAATGTGGTCGTCGATTCCTTCAGGCGCTATAGCCACGAGGCCCTGGGCCACACCGATCAATTTTCCACTTATGGCACTGATACCAACGTCCCCGACCAGAGCTTTAACACTTATGCCTCCAAAGCCGTCGGAGGCAACGGCGGGTTCACAACCTACGAACAATCCGTCAATGTCCCCAATCTCCGGTTCACCACCTACTCCAGTGATGCCACTGGAAGATCTCAATCCTTCAAGAGCTACAGCGAGAACGCAAACGCCGGAGATCAGTCGTTTGTCAACTATGGGAAACGGGGAAATGGGGGTCCGAACGAGTTCACTGGCTACGGGACCAACGCAAACGTAATAGGCTCAGGGTTTTCAAGCTACGGGGCAAACGGAAATGGTGCTAACGACACATTCACCAATTACGGCAACGAGCAGAACAACCCACAGAATAACTTCAGGAGCTATGGCGACGGTGGGAATGGAGCGATTGAAAGCTTCTCTAGTTACAGGGACCAGGCCAATGTGGGGGACGATTCATTCCAGTCCTACTCCAAAAACTCCAACTCTGCCAAGGTTAATTTCGCAAATTATGGGAAATCCTTCAACGAGGGTACGGACAAATTTAGTGGCTATGGTCAGAATGGGAATGGGCAAAGCGTGGGGTTCAAGACGTATGGGGTGAATACGACGTTCAAGGATTACGCAAAACAGGGAATTAGTTTTGCCAAGTACAGCAATGTGAGCTCTGGGGGCGCGAAAATGTCGGTGAGCGAAAGTTTGGCGAAGAGGTGGGTAGAGCCCGGGAAGTTCTTCCGGGAGTCGATGTTGAGGAAGGGGACGGTGGTGGCGATGCCGGACATCAGAGATAAAATGCCGAAGAGGTCGTTCTTGCCCCGATCTATTCTGTCCAAGCTACCCTTCTCGAGTTCGAAGCTGGAGGTGATGAAGCAGATATTCCACGCGGGGGATAACTCGTCGATGGAGACTATGATGACGGAGACGCTTAGGGACTGCGAGAGGACGCCCAGCGCCGGGGAGACGAAGCGGTGCGTGGGTTCGGTGGAGGATATGATAGACTTCGCGACGTCGGTGCTGGGGCGGAACGTGGTGGTCCGGACGACGGAGAACACGAAGGGGTCGAAGGGGAACATAATGATTGGGGCAGTGAAAGGGATTGAGGGAGGGAAGGTGACGGAGTCTGTGTCTTGCCACCAGAGCCTGTTCCCTTACCTCCTCTACTACTGCCACTCCGTGCCCAAAGTTCGGGTGTACGAGGCGGAGTTGCTGGATCCAACCTCCAAAGCCATCATCAACCACGGAGTTGCCATCTGTCACCTGGACACCTCGGCCTGGAGTCCCGCTCACGGGGCCTTCATAGCTCTCGGATCCGCCCCCGGTCGGGTGGAGGTGTGCCACTGGATCTTCGAGAATGACATGACGTGGAGTGTGGCGGACTGA
Coding sequence (CDS)
ATGCATACATTACCCGCGCCCCTTCTGGTTCTCCTCTATCTCTTTATCTTCTTGCTTTCACCGCTCAATGTTCCCGCGGCCGCCGACGAGGACAACCCCTTCACCCCAAAAGCTTTTCTGAATCGTTATTGGAACAAGGAGGTGCGGAATGATATGCCAAAACCCACTTTTCTCTTCTCCAAGGTCTCTCCCTTGACGGCAGTGCAGTCGGCGGCCTTCGCCAAACTTGCAGCTCAAAATGCTCTCTCCTCCCGACTCCCCGAGTTCTGCTCCGCCGCTAACTTGCTTTGCTTTCCTGATTTATCCCCCTCTTTGGCCAAGCACGACAGCACCTCCAACTTTGCCGTGTATTCCAATAAGAACTTCACCACTTACGGCACCCAAAGATCTGGTGGAATCGACTCCTTCAAAAACTATTCCAATGGTGACAATGTGGTCGTCGATTCCTTCAGGCGCTATAGCCACGAGGCCCTGGGCCACACCGATCAATTTTCCACTTATGGCACTGATACCAACGTCCCCGACCAGAGCTTTAACACTTATGCCTCCAAAGCCGTCGGAGGCAACGGCGGGTTCACAACCTACGAACAATCCGTCAATGTCCCCAATCTCCGGTTCACCACCTACTCCAGTGATGCCACTGGAAGATCTCAATCCTTCAAGAGCTACAGCGAGAACGCAAACGCCGGAGATCAGTCGTTTGTCAACTATGGGAAACGGGGAAATGGGGGTCCGAACGAGTTCACTGGCTACGGGACCAACGCAAACGTAATAGGCTCAGGGTTTTCAAGCTACGGGGCAAACGGAAATGGTGCTAACGACACATTCACCAATTACGGCAACGAGCAGAACAACCCACAGAATAACTTCAGGAGCTATGGCGACGGTGGGAATGGAGCGATTGAAAGCTTCTCTAGTTACAGGGACCAGGCCAATGTGGGGGACGATTCATTCCAGTCCTACTCCAAAAACTCCAACTCTGCCAAGGTTAATTTCGCAAATTATGGGAAATCCTTCAACGAGGGTACGGACAAATTTAGTGGCTATGGTCAGAATGGGAATGGGCAAAGCGTGGGGTTCAAGACGTATGGGGTGAATACGACGTTCAAGGATTACGCAAAACAGGGAATTAGTTTTGCCAAGTACAGCAATGTGAGCTCTGGGGGCGCGAAAATGTCGGTGAGCGAAAGTTTGGCGAAGAGGTGGGTAGAGCCCGGGAAGTTCTTCCGGGAGTCGATGTTGAGGAAGGGGACGGTGGTGGCGATGCCGGACATCAGAGATAAAATGCCGAAGAGGTCGTTCTTGCCCCGATCTATTCTGTCCAAGCTACCCTTCTCGAGTTCGAAGCTGGAGGTGATGAAGCAGATATTCCACGCGGGGGATAACTCGTCGATGGAGACTATGATGACGGAGACGCTTAGGGACTGCGAGAGGACGCCCAGCGCCGGGGAGACGAAGCGGTGCGTGGGTTCGGTGGAGGATATGATAGACTTCGCGACGTCGGTGCTGGGGCGGAACGTGGTGGTCCGGACGACGGAGAACACGAAGGGGTCGAAGGGGAACATAATGATTGGGGCAGTGAAAGGGATTGAGGGAGGGAAGGTGACGGAGTCTGTGTCTTGCCACCAGAGCCTGTTCCCTTACCTCCTCTACTACTGCCACTCCGTGCCCAAAGTTCGGGTGTACGAGGCGGAGTTGCTGGATCCAACCTCCAAAGCCATCATCAACCACGGAGTTGCCATCTGTCACCTGGACACCTCGGCCTGGAGTCCCGCTCACGGGGCCTTCATAGCTCTCGGATCCGCCCCCGGTCGGGTGGAGGTGTGCCACTGGATCTTCGAGAATGACATGACGTGGAGTGTGGCGGACTGA
Protein sequence
MHTLPAPLLVLLYLFIFLLSPLNVPAAADEDNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEFCSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDSFRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTYSSDATGRSQSFKSYSENANAGDQSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGANGNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSAKVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSGGAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSSKLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVVVRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLDPTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD
Homology
BLAST of CmaCh05G000090 vs. ExPASy Swiss-Prot
Match:
P92990 (Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PGL3 PE=2 SV=2)
HSP 1 Score: 783.5 bits (2022), Expect = 1.8e-225
Identity = 383/595 (64.37%), Postives = 470/595 (78.99%), Query Frame = 0
Query: 30 EDNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEF 89
E+NPFTPKA L RYWNKE+R P+ FL SK SPL AV SA F+KLAA N+L +R P+F
Sbjct: 33 EENPFTPKASLVRYWNKEIRGQSPRSEFLISKASPLNAVDSATFSKLAAANSLPTRFPDF 92
Query: 90 CSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 149
CSAANL CFPDL SL KHD F+VY KNFT YG R+GG DSFKNYS NVV DS
Sbjct: 93 CSAANLFCFPDLGASLEKHDDDVKFSVYDQKNFTNYGNARAGGADSFKNYSKDGNVVTDS 152
Query: 150 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 209
FRRYS A GH D+F+ YG ++NV ++ FN+Y + GG G FT Y+ +VN P RFT Y
Sbjct: 153 FRRYSRNAAGHDDKFTVYGENSNVVEEGFNSYGTFGTGGAGDFTNYQNNVNNPTSRFTAY 212
Query: 210 SSDATGRSQSFKSYSENANAGD-QSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGAN 269
S GRSQ+FK+Y+ ANAG+ QSF +YGK GNG PNEFT YG ++NVIGSGFS+YG +
Sbjct: 213 SDGGNGRSQTFKTYTHEANAGNGQSFTSYGKNGNGVPNEFTSYGVSSNVIGSGFSNYGES 272
Query: 270 GNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSA 329
GN ANDTFT+YG++ N PQNNF +YG GN A+++F++YRD+ANVGDDSF SY+K+SNS
Sbjct: 273 GNAANDTFTSYGSDGNVPQNNFNNYGASGNAAVDTFANYRDKANVGDDSFSSYAKDSNSE 332
Query: 330 KVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSG 389
KVNF NYG+SFN G++ F+GYG+ G + FKTY N+TFKDYAK+G++FAKY NVS+
Sbjct: 333 KVNFVNYGQSFNPGSETFTGYGKGAEGSKLSFKTYTPNSTFKDYAKKGVAFAKY-NVSTT 392
Query: 390 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 449
A +W+EPGKFFRES L++GTV+ MPDI+DKMPKRSFLPRSI++KLPFS+S
Sbjct: 393 TANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTS 452
Query: 450 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 509
KL +K+IFHA +NS+M ++T+ + +CER PS GETKRCVGS EDMIDFATSVLGR+VV
Sbjct: 453 KLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVV 512
Query: 510 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 569
+RTTEN GSK ++IG V GI GGK+T++VSCHQSL+PYLLYYCHSVPKVRVYEA+LL+
Sbjct: 513 LRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLE 572
Query: 570 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
SK INHG+AICH+DTS+W P+HGAF+ALGS PGR+EVCHWIFENDM W++AD
Sbjct: 573 LNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626
BLAST of CmaCh05G000090 vs. ExPASy Swiss-Prot
Match:
P92982 (Polygalacturonase 1 beta-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PGL1 PE=2 SV=2)
HSP 1 Score: 770.8 bits (1989), Expect = 1.2e-221
Identity = 376/595 (63.19%), Postives = 458/595 (76.97%), Query Frame = 0
Query: 30 EDNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEF 89
E NPFTPKA L RYWNK++ + P FL SK SPLTAV SA FAKLA++NAL RLP+F
Sbjct: 34 EINPFTPKASLVRYWNKQIHHQSPGSAFLLSKASPLTAVASATFAKLASENALPDRLPDF 93
Query: 90 CSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 149
CSAANL CFPDL P+L KH + F+VY +NFT YGT GG DSFK YS N V DS
Sbjct: 94 CSAANLFCFPDLGPTLEKHSNDVKFSVYDQRNFTNYGTIHPGGADSFKKYSQNGNAVTDS 153
Query: 150 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 209
FRRYS +A GH D+F+ Y ++NV ++ FN+Y + A GG+G F Y+ VN P RF Y
Sbjct: 154 FRRYSRDAAGHEDKFTGYADNSNVVEEKFNSYGTSATGGSGDFKNYQSGVNNPTTRFKAY 213
Query: 210 SSDATGRSQSFKSYSENANAG-DQSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGAN 269
S + GR+Q+FK+Y+ AN+G QSF +YGK GNG PNEF+ YG ++NVIGS FS+YG N
Sbjct: 214 SDEGNGRAQTFKTYTHEANSGPGQSFTSYGKNGNGAPNEFSSYGVSSNVIGSDFSNYGEN 273
Query: 270 GNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSA 329
GN ANDTF YG + N PQNNF+SYG GN A+++F +YRD ANVGDDSF SY+KNSN
Sbjct: 274 GNAANDTFKGYGGDGNVPQNNFKSYGASGNAAVDTFLNYRDNANVGDDSFSSYAKNSNFE 333
Query: 330 KVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSG 389
KV+F NYGKS N G++ FSGYG+ G + FKTY N+TFKDY K G+ FAKY+ S G
Sbjct: 334 KVDFVNYGKSINPGSESFSGYGKGAEGNKIDFKTYTQNSTFKDYTKTGVEFAKYNRSSLG 393
Query: 390 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 449
G K +WVEPGKFFRESML++GT++ MPDI+DKMPKRSFLPRSI+SKLPFS+S
Sbjct: 394 GGK------TVNKWVEPGKFFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFSTS 453
Query: 450 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 509
K+ +K++FHA DNS+ME ++T+ +R+CER P+ ETKRCVGS EDMIDFATSVLGR+VV
Sbjct: 454 KIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVV 513
Query: 510 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 569
+RTTE+ GSK +MIG V GI GG+VT+SVSCHQSL+PYLLYYCHSVPKVRVYE++LLD
Sbjct: 514 LRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLD 573
Query: 570 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
P SKA INHG+AICH+DTSAW HGAF+ LGS PG++EVCHWIFENDM W++AD
Sbjct: 574 PKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622
BLAST of CmaCh05G000090 vs. ExPASy Swiss-Prot
Match:
Q40161 (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum OX=4081 GN=GP1 PE=1 SV=1)
HSP 1 Score: 750.7 bits (1937), Expect = 1.3e-215
Identity = 385/634 (60.73%), Postives = 474/634 (74.76%), Query Frame = 0
Query: 1 MHT---LPAPLLVLLYLFIFLLSPLNVPAAADED--NPFTPKAFLNRYWNKEVRNDMPKP 60
MHT LP +L+LL +F L NV D + NPFTPK +L RYW K++ ND+PKP
Sbjct: 1 MHTKIHLPPCILLLL---LFSLPSFNVVVGGDGESGNPFTPKGYLIRYWKKQISNDLPKP 60
Query: 61 TFLFSKVSPLTAVQSAAFAKLAA-QNALSSRLPEFCSAANLLCFPDLSPSLAKHDSTSNF 120
FL +K SPL A Q A + KL A QNAL+++L FCS+ANL+C PDLSPSL KH +F
Sbjct: 61 WFLLNKASPLNAAQYATYTKLVADQNALTTQLHTFCSSANLMCAPDLSPSLEKHSGDIHF 120
Query: 121 AVYSNKNFTTYGTQRSG-GIDSFKNYSNGDNVVVDSFRRYSHEALGHTDQFSTYGTDTNV 180
A YS+KNFT YGT G G+++FKNYS G+N+ V+SFRRY + ++F Y +D NV
Sbjct: 121 ATYSDKNFTNYGTNEPGIGVNTFKNYSEGENIPVNSFRRYGRGS-PRDNKFDNYASDGNV 180
Query: 181 PDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTYSSDATGRSQSFKSYSENANAGDQS 240
DQSFN+Y++ GG+G FT Y + N PNL FT+YS TG Q F YS+ ANAGDQ
Sbjct: 181 IDQSFNSYSTSTAGGSGKFTNYAANANDPNLHFTSYSDQGTGGVQKFTIYSQEANAGDQY 240
Query: 241 FVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGANGNGANDTFTNYGNEQNNPQNNFRSY 300
F +YGK GNG EF YG + NVIGS F++YG NG + FT+YG N P+N+F +Y
Sbjct: 241 FKSYGKNGNGANGEFVSYGNDTNVIGSTFTNYGQTANGGDQKFTSYGFNGNVPENHFTNY 300
Query: 301 GDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSAKVNFANYGKSFNEGTDKFSGYGQNG 360
G GGNG E+F+SYRDQ+NVGDD+F +Y K++N + NF NYG+SFNEGTD F+ YG+ G
Sbjct: 301 GAGGNGPSETFNSYRDQSNVGDDTFTTYVKDANGGEANFTNYGQSFNEGTDVFTTYGKGG 360
Query: 361 NGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSG--GAKMSVS--ESLAKRWVEPGKFF 420
N + FKTYGVN TFKDY K +F+ Y N +S + M V+ + + RWVEPGKFF
Sbjct: 361 NDPHINFKTYGVNNTFKDYVKDTATFSNYHNKTSQVLASLMEVNGGKKVNNRWVEPGKFF 420
Query: 421 RESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSSKLEVMKQIFHAGDNSSMETMM 480
RE ML+ GT++ MPDI+DKMPKRSFLPR I SKLPFS+SK+ +K+IFHAGD S +E M+
Sbjct: 421 REKMLKSGTIMPMPDIKDKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMI 480
Query: 481 TETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVVVRTTENTKGSKGNIMIGAVKG 540
+ L +CER PSAGETKRCV S EDMIDFATSVLGRNVVVRTTE+TKGS GNIMIG+VKG
Sbjct: 481 GDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKG 540
Query: 541 IEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLDPTSKAIINHGVAICHLDTSAW 600
I GGKVT+SVSCHQ+L+PYLLYYCHSVPKVRVYEA++LDP SK INHGVAICH+DTS+W
Sbjct: 541 INGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDPNSKVKINHGVAICHVDTSSW 600
Query: 601 SPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
P+HGAF+ALGS PG++EVCHWIFENDMTW++AD
Sbjct: 601 GPSHGAFVALGSGPGKIEVCHWIFENDMTWAIAD 630
BLAST of CmaCh05G000090 vs. ExPASy Swiss-Prot
Match:
O80760 (Polygalacturonase 1 beta-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PGL2 PE=2 SV=1)
HSP 1 Score: 743.0 bits (1917), Expect = 2.7e-213
Identity = 370/595 (62.18%), Postives = 448/595 (75.29%), Query Frame = 0
Query: 31 DNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEFC 90
+NPFTPKA L RYWN + D PKP+F SK SPLTAV S FA LA+ +AL++ +FC
Sbjct: 37 ENPFTPKASLIRYWNNHINGDSPKPSFFLSKASPLTAVDSTRFASLASNHALNTHHSDFC 96
Query: 91 SAANLLCFPDLSP-SLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 150
SAA L CFP+L+ SL KH NFA YS KNFT YG+ R G DSFKNYS GDN+ VDS
Sbjct: 97 SAAKLFCFPELAAHSLEKHGDDVNFAAYSGKNFTNYGSDRLSGADSFKNYSGGDNIAVDS 156
Query: 151 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 210
FRRYS + GH D F+ Y + NV DQSF TYA+ GG+G FT Y N PN RFT+Y
Sbjct: 157 FRRYSRNSAGHDDGFTNYAGEVNVADQSFTTYATGTTGGSGEFTNYNTDANEPNGRFTSY 216
Query: 211 SSDATGRSQSFKSYSENANAGDQSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGANG 270
S A GRSQ+F +YSEN N G QSF +Y K GNG PNEF+GYGT +NV+ +GF+ YG +
Sbjct: 217 SDKANGRSQTFTTYSENGNTGYQSFTSYSKNGNGAPNEFSGYGTGSNVVNTGFTKYGESA 276
Query: 271 NGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSAK 330
NGAND+FT+YG N P N F+ YGDGGNGA+ F +YRDQ+N+G DSF SY+KNSN+ K
Sbjct: 277 NGANDSFTSYGENGNVPVNEFKGYGDGGNGAVYGFKNYRDQSNIGVDSFSSYAKNSNNEK 336
Query: 331 VNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYS-NVSSG 390
VNF NYGKSFN G+D F+GYGQ+ G +V FKTYG +FK Y K G+ FA+YS NVSS
Sbjct: 337 VNFVNYGKSFNLGSDNFTGYGQDNVGGNVSFKTYGQGQSFKVYTKDGVVFARYSNNVSSN 396
Query: 391 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 450
G ++ +WVE GKFFRE+ML++GT++ MPDI+DKMPKR+FLPR+I+ LPFSSS
Sbjct: 397 GKTVN-------KWVEEGKFFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSS 456
Query: 451 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 510
+ + ++F AG+NSSM +++ + +CER S GETKRCVGS EDMIDFATSVLGR VV
Sbjct: 457 TIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVV 516
Query: 511 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 570
VRTTEN GSK ++IG V GI GG VT +VSCHQSL+PYLLYYCHSVP+VRVYE +LLD
Sbjct: 517 VRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLD 576
Query: 571 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
P S INHGVAICH+DTSAWSP+HGAF+ALGS PG++EVCHWIFENDMTW++ D
Sbjct: 577 PKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624
BLAST of CmaCh05G000090 vs. ExPASy Swiss-Prot
Match:
P93217 (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum OX=4081 GN=GP2 PE=3 SV=1)
HSP 1 Score: 736.1 bits (1899), Expect = 3.3e-211
Identity = 370/622 (59.49%), Postives = 460/622 (73.95%), Query Frame = 0
Query: 11 LLYLFIFLLSPLNVPAAADED---NPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTA 70
+L + +F LS N+ A D D NPFTPK ++ RYWNK V ND+PKP FL +K SPL A
Sbjct: 11 ILLVLLFSLSSFNIVVAKDGDESGNPFTPKGYVIRYWNKHVSNDLPKPWFLLNKASPLNA 70
Query: 71 VQSAAFAKLAA-QNALSSRLPEFCSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYG 130
Q A + KL A QNALS+ L FCS+ANL+C PDL PSL KH +F Y NKNFT YG
Sbjct: 71 AQYATYTKLVADQNALSTHLQSFCSSANLMCAPDLLPSLEKHTGDIHFTTYGNKNFTNYG 130
Query: 131 TQRSG-GIDSFKNYSNGDNVVVDSFRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKA 190
T G G+++FKNYS ++ V+SFRRY + ++F Y D NV DQSFN+Y++
Sbjct: 131 TNEPGIGVNTFKNYS--EDASVNSFRRYGRGS-PRDNKFDNYAPDGNVIDQSFNSYSTNT 190
Query: 191 VGGNGGFTTYEQSVNVPNLRFTTYSSDATGRSQSFKSYSENANAGDQSFVNYGKRGNGGP 250
GG+G FT Y + NVP+LRFT YS TG Q FK+Y E N+G QSF +YGK GNG
Sbjct: 191 PGGSGQFTNYAPNTNVPDLRFTAYSDQGTGGEQEFKTYLEQGNSGGQSFKSYGKNGNGAD 250
Query: 251 NEFTGYGTNANVIGSGFSSYGANGNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFS 310
++FT YG NV S F +YG N NG N FT+Y NNPQNNF++YG GGNG E+F+
Sbjct: 251 SKFTSYGNETNVAASTFKNYGQNANGENQNFTSYSTNGNNPQNNFKNYGVGGNGPSETFT 310
Query: 311 SYRDQANVGDDSFQSYSKNSNSAKVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGV 370
+YRD++NVGDD F +Y K++N+ + NF NYG+SFNEGTD F YG+ GN + FKTYGV
Sbjct: 311 NYRDESNVGDDKFSNYVKDANAGEANFTNYGQSFNEGTDVFITYGKGGNDPHINFKTYGV 370
Query: 371 NTTFKDYAKQGISFAKYSNVSSGG----AKMSVSESLAKRWVEPGKFFRESMLRKGTVVA 430
N TFKDY K +F+ Y N +S ++++ + + RW+EPGKFFRE ML+ GT++
Sbjct: 371 NNTFKDYVKDTATFSNYHNKTSQDLASLSEVNGGKKVNNRWIEPGKFFREKMLKSGTIMP 430
Query: 431 MPDIRDKMPKRSFLPRSILSKLPFSSSKLEVMKQIFHAGDNSSMETMMTETLRDCERTPS 490
MPDI+DKMPKRSFLPR+I +KLPFS+SK++ +K+IFHA ++S + M+ + L +CER PS
Sbjct: 431 MPDIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPS 490
Query: 491 AGETKRCVGSVEDMIDFATSVLGRNVVVRTTENTKGSKGNIMIGAVKGIEGGKVTESVSC 550
GETK+CV S EDMIDFATSVLGRNVVVRTTENT GSKGNIMIG++KGI GGKVT+SVSC
Sbjct: 491 PGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSC 550
Query: 551 HQSLFPYLLYYCHSVPKVRVYEAELLDPTSKAIINHGVAICHLDTSAWSPAHGAFIALGS 610
HQ+L+P LLYYCHSVPKVRVYEA++LDP SKA INHGVAICH+DTS+W P HGAFIALGS
Sbjct: 551 HQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGS 610
Query: 611 APGRVEVCHWIFENDMTWSVAD 624
PG++EVCHWIFENDMTW+ AD
Sbjct: 611 GPGKIEVCHWIFENDMTWATAD 629
BLAST of CmaCh05G000090 vs. TAIR 10
Match:
AT1G70370.1 (polygalacturonase 2 )
HSP 1 Score: 783.5 bits (2022), Expect = 1.3e-226
Identity = 383/595 (64.37%), Postives = 470/595 (78.99%), Query Frame = 0
Query: 30 EDNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEF 89
E+NPFTPKA L RYWNKE+R P+ FL SK SPL AV SA F+KLAA N+L +R P+F
Sbjct: 33 EENPFTPKASLVRYWNKEIRGQSPRSEFLISKASPLNAVDSATFSKLAAANSLPTRFPDF 92
Query: 90 CSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 149
CSAANL CFPDL SL KHD F+VY KNFT YG R+GG DSFKNYS NVV DS
Sbjct: 93 CSAANLFCFPDLGASLEKHDDDVKFSVYDQKNFTNYGNARAGGADSFKNYSKDGNVVTDS 152
Query: 150 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 209
FRRYS A GH D+F+ YG ++NV ++ FN+Y + GG G FT Y+ +VN P RFT Y
Sbjct: 153 FRRYSRNAAGHDDKFTVYGENSNVVEEGFNSYGTFGTGGAGDFTNYQNNVNNPTSRFTAY 212
Query: 210 SSDATGRSQSFKSYSENANAGD-QSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGAN 269
S GRSQ+FK+Y+ ANAG+ QSF +YGK GNG PNEFT YG ++NVIGSGFS+YG +
Sbjct: 213 SDGGNGRSQTFKTYTHEANAGNGQSFTSYGKNGNGVPNEFTSYGVSSNVIGSGFSNYGES 272
Query: 270 GNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSA 329
GN ANDTFT+YG++ N PQNNF +YG GN A+++F++YRD+ANVGDDSF SY+K+SNS
Sbjct: 273 GNAANDTFTSYGSDGNVPQNNFNNYGASGNAAVDTFANYRDKANVGDDSFSSYAKDSNSE 332
Query: 330 KVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSG 389
KVNF NYG+SFN G++ F+GYG+ G + FKTY N+TFKDYAK+G++FAKY NVS+
Sbjct: 333 KVNFVNYGQSFNPGSETFTGYGKGAEGSKLSFKTYTPNSTFKDYAKKGVAFAKY-NVSTT 392
Query: 390 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 449
A +W+EPGKFFRES L++GTV+ MPDI+DKMPKRSFLPRSI++KLPFS+S
Sbjct: 393 TANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTS 452
Query: 450 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 509
KL +K+IFHA +NS+M ++T+ + +CER PS GETKRCVGS EDMIDFATSVLGR+VV
Sbjct: 453 KLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVV 512
Query: 510 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 569
+RTTEN GSK ++IG V GI GGK+T++VSCHQSL+PYLLYYCHSVPKVRVYEA+LL+
Sbjct: 513 LRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLE 572
Query: 570 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
SK INHG+AICH+DTS+W P+HGAF+ALGS PGR+EVCHWIFENDM W++AD
Sbjct: 573 LNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626
BLAST of CmaCh05G000090 vs. TAIR 10
Match:
AT1G70370.2 (polygalacturonase 2 )
HSP 1 Score: 783.5 bits (2022), Expect = 1.3e-226
Identity = 383/595 (64.37%), Postives = 470/595 (78.99%), Query Frame = 0
Query: 30 EDNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEF 89
E+NPFTPKA L RYWNKE+R P+ FL SK SPL AV SA F+KLAA N+L +R P+F
Sbjct: 33 EENPFTPKASLVRYWNKEIRGQSPRSEFLISKASPLNAVDSATFSKLAAANSLPTRFPDF 92
Query: 90 CSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 149
CSAANL CFPDL SL KHD F+VY KNFT YG R+GG DSFKNYS NVV DS
Sbjct: 93 CSAANLFCFPDLGASLEKHDDDVKFSVYDQKNFTNYGNARAGGADSFKNYSKDGNVVTDS 152
Query: 150 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 209
FRRYS A GH D+F+ YG ++NV ++ FN+Y + GG G FT Y+ +VN P RFT Y
Sbjct: 153 FRRYSRNAAGHDDKFTVYGENSNVVEEGFNSYGTFGTGGAGDFTNYQNNVNNPTSRFTAY 212
Query: 210 SSDATGRSQSFKSYSENANAGD-QSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGAN 269
S GRSQ+FK+Y+ ANAG+ QSF +YGK GNG PNEFT YG ++NVIGSGFS+YG +
Sbjct: 213 SDGGNGRSQTFKTYTHEANAGNGQSFTSYGKNGNGVPNEFTSYGVSSNVIGSGFSNYGES 272
Query: 270 GNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSA 329
GN ANDTFT+YG++ N PQNNF +YG GN A+++F++YRD+ANVGDDSF SY+K+SNS
Sbjct: 273 GNAANDTFTSYGSDGNVPQNNFNNYGASGNAAVDTFANYRDKANVGDDSFSSYAKDSNSE 332
Query: 330 KVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSG 389
KVNF NYG+SFN G++ F+GYG+ G + FKTY N+TFKDYAK+G++FAKY NVS+
Sbjct: 333 KVNFVNYGQSFNPGSETFTGYGKGAEGSKLSFKTYTPNSTFKDYAKKGVAFAKY-NVSTT 392
Query: 390 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 449
A +W+EPGKFFRES L++GTV+ MPDI+DKMPKRSFLPRSI++KLPFS+S
Sbjct: 393 TANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTS 452
Query: 450 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 509
KL +K+IFHA +NS+M ++T+ + +CER PS GETKRCVGS EDMIDFATSVLGR+VV
Sbjct: 453 KLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVV 512
Query: 510 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 569
+RTTEN GSK ++IG V GI GGK+T++VSCHQSL+PYLLYYCHSVPKVRVYEA+LL+
Sbjct: 513 LRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLE 572
Query: 570 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
SK INHG+AICH+DTS+W P+HGAF+ALGS PGR+EVCHWIFENDM W++AD
Sbjct: 573 LNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626
BLAST of CmaCh05G000090 vs. TAIR 10
Match:
AT1G23760.1 (BURP domain-containing protein )
HSP 1 Score: 770.8 bits (1989), Expect = 8.5e-223
Identity = 376/595 (63.19%), Postives = 458/595 (76.97%), Query Frame = 0
Query: 30 EDNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEF 89
E NPFTPKA L RYWNK++ + P FL SK SPLTAV SA FAKLA++NAL RLP+F
Sbjct: 34 EINPFTPKASLVRYWNKQIHHQSPGSAFLLSKASPLTAVASATFAKLASENALPDRLPDF 93
Query: 90 CSAANLLCFPDLSPSLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 149
CSAANL CFPDL P+L KH + F+VY +NFT YGT GG DSFK YS N V DS
Sbjct: 94 CSAANLFCFPDLGPTLEKHSNDVKFSVYDQRNFTNYGTIHPGGADSFKKYSQNGNAVTDS 153
Query: 150 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 209
FRRYS +A GH D+F+ Y ++NV ++ FN+Y + A GG+G F Y+ VN P RF Y
Sbjct: 154 FRRYSRDAAGHEDKFTGYADNSNVVEEKFNSYGTSATGGSGDFKNYQSGVNNPTTRFKAY 213
Query: 210 SSDATGRSQSFKSYSENANAG-DQSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGAN 269
S + GR+Q+FK+Y+ AN+G QSF +YGK GNG PNEF+ YG ++NVIGS FS+YG N
Sbjct: 214 SDEGNGRAQTFKTYTHEANSGPGQSFTSYGKNGNGAPNEFSSYGVSSNVIGSDFSNYGEN 273
Query: 270 GNGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSA 329
GN ANDTF YG + N PQNNF+SYG GN A+++F +YRD ANVGDDSF SY+KNSN
Sbjct: 274 GNAANDTFKGYGGDGNVPQNNFKSYGASGNAAVDTFLNYRDNANVGDDSFSSYAKNSNFE 333
Query: 330 KVNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYSNVSSG 389
KV+F NYGKS N G++ FSGYG+ G + FKTY N+TFKDY K G+ FAKY+ S G
Sbjct: 334 KVDFVNYGKSINPGSESFSGYGKGAEGNKIDFKTYTQNSTFKDYTKTGVEFAKYNRSSLG 393
Query: 390 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 449
G K +WVEPGKFFRESML++GT++ MPDI+DKMPKRSFLPRSI+SKLPFS+S
Sbjct: 394 GGK------TVNKWVEPGKFFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFSTS 453
Query: 450 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 509
K+ +K++FHA DNS+ME ++T+ +R+CER P+ ETKRCVGS EDMIDFATSVLGR+VV
Sbjct: 454 KIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVV 513
Query: 510 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 569
+RTTE+ GSK +MIG V GI GG+VT+SVSCHQSL+PYLLYYCHSVPKVRVYE++LLD
Sbjct: 514 LRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLD 573
Query: 570 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
P SKA INHG+AICH+DTSAW HGAF+ LGS PG++EVCHWIFENDM W++AD
Sbjct: 574 PKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622
BLAST of CmaCh05G000090 vs. TAIR 10
Match:
AT1G60390.1 (polygalacturonase 1 )
HSP 1 Score: 743.0 bits (1917), Expect = 1.9e-214
Identity = 370/595 (62.18%), Postives = 448/595 (75.29%), Query Frame = 0
Query: 31 DNPFTPKAFLNRYWNKEVRNDMPKPTFLFSKVSPLTAVQSAAFAKLAAQNALSSRLPEFC 90
+NPFTPKA L RYWN + D PKP+F SK SPLTAV S FA LA+ +AL++ +FC
Sbjct: 37 ENPFTPKASLIRYWNNHINGDSPKPSFFLSKASPLTAVDSTRFASLASNHALNTHHSDFC 96
Query: 91 SAANLLCFPDLSP-SLAKHDSTSNFAVYSNKNFTTYGTQRSGGIDSFKNYSNGDNVVVDS 150
SAA L CFP+L+ SL KH NFA YS KNFT YG+ R G DSFKNYS GDN+ VDS
Sbjct: 97 SAAKLFCFPELAAHSLEKHGDDVNFAAYSGKNFTNYGSDRLSGADSFKNYSGGDNIAVDS 156
Query: 151 FRRYSHEALGHTDQFSTYGTDTNVPDQSFNTYASKAVGGNGGFTTYEQSVNVPNLRFTTY 210
FRRYS + GH D F+ Y + NV DQSF TYA+ GG+G FT Y N PN RFT+Y
Sbjct: 157 FRRYSRNSAGHDDGFTNYAGEVNVADQSFTTYATGTTGGSGEFTNYNTDANEPNGRFTSY 216
Query: 211 SSDATGRSQSFKSYSENANAGDQSFVNYGKRGNGGPNEFTGYGTNANVIGSGFSSYGANG 270
S A GRSQ+F +YSEN N G QSF +Y K GNG PNEF+GYGT +NV+ +GF+ YG +
Sbjct: 217 SDKANGRSQTFTTYSENGNTGYQSFTSYSKNGNGAPNEFSGYGTGSNVVNTGFTKYGESA 276
Query: 271 NGANDTFTNYGNEQNNPQNNFRSYGDGGNGAIESFSSYRDQANVGDDSFQSYSKNSNSAK 330
NGAND+FT+YG N P N F+ YGDGGNGA+ F +YRDQ+N+G DSF SY+KNSN+ K
Sbjct: 277 NGANDSFTSYGENGNVPVNEFKGYGDGGNGAVYGFKNYRDQSNIGVDSFSSYAKNSNNEK 336
Query: 331 VNFANYGKSFNEGTDKFSGYGQNGNGQSVGFKTYGVNTTFKDYAKQGISFAKYS-NVSSG 390
VNF NYGKSFN G+D F+GYGQ+ G +V FKTYG +FK Y K G+ FA+YS NVSS
Sbjct: 337 VNFVNYGKSFNLGSDNFTGYGQDNVGGNVSFKTYGQGQSFKVYTKDGVVFARYSNNVSSN 396
Query: 391 GAKMSVSESLAKRWVEPGKFFRESMLRKGTVVAMPDIRDKMPKRSFLPRSILSKLPFSSS 450
G ++ +WVE GKFFRE+ML++GT++ MPDI+DKMPKR+FLPR+I+ LPFSSS
Sbjct: 397 GKTVN-------KWVEEGKFFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSS 456
Query: 451 KLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVGSVEDMIDFATSVLGRNVV 510
+ + ++F AG+NSSM +++ + +CER S GETKRCVGS EDMIDFATSVLGR VV
Sbjct: 457 TIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVV 516
Query: 511 VRTTENTKGSKGNIMIGAVKGIEGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEAELLD 570
VRTTEN GSK ++IG V GI GG VT +VSCHQSL+PYLLYYCHSVP+VRVYE +LLD
Sbjct: 517 VRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLD 576
Query: 571 PTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWSVAD 624
P S INHGVAICH+DTSAWSP+HGAF+ALGS PG++EVCHWIFENDMTW++ D
Sbjct: 577 PKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624
BLAST of CmaCh05G000090 vs. TAIR 10
Match:
AT5G25610.1 (BURP domain-containing protein )
HSP 1 Score: 114.8 bits (286), Expect = 2.5e-25
Identity = 69/194 (35.57%), Postives = 95/194 (48.97%), Query Frame = 0
Query: 431 KRSFLPRSILSKLPFSSSKLEVMKQIFHAGDNSSMETMMTETLRDCERTPSAGETKRCVG 490
K +FLPR +PF S K + F S MM +T+ +CE +GE K C
Sbjct: 201 KTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCAT 260
Query: 491 SVEDMIDFATSVLGR-NVVVRTTE----NTKGSKGNIMIGAVKGIEGGKVTESVSCHQSL 550
S+E M+DF+ S LG+ +V +TE N K I VK + K SV CH+
Sbjct: 261 SLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDK---SVVCHKQK 320
Query: 551 FPYLLYYCHSVPKVRVYEAELLDPTSKAIINHGVAICHLDTSAWSPAHGAFIALGSAPGR 610
+P+ ++YCH VY L + VA+CH +TSAW+P H AF L PG
Sbjct: 321 YPFAVFYCHKAMMTTVYAVPL--EGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGT 380
Query: 611 VEVCHWIFENDMTW 620
V VCH++ E + W
Sbjct: 381 VPVCHFLPETHVVW 389
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P92990 | 1.8e-225 | 64.37 | Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PGL3 ... | [more] |
P92982 | 1.2e-221 | 63.19 | Polygalacturonase 1 beta-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PGL1 ... | [more] |
Q40161 | 1.3e-215 | 60.73 | Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum OX=4081 G... | [more] |
O80760 | 2.7e-213 | 62.18 | Polygalacturonase 1 beta-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PGL2 ... | [more] |
P93217 | 3.3e-211 | 59.49 | Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum OX=4081 G... | [more] |