CmaCh04G030170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G030170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DUF2062 domain-containing protein
Location	Cma_Chr04: 19708266 .. 19711287 (-)
RNA-Seq Expression	CmaCh04G030170
Synteny	CmaCh04G030170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGCGCGCTACTCTCCGATAAGATCAATTTGGAGGGAAAAAGTTGTGACTTCACCGTTTGGTAATTGATATTTAATAACTCAGTTACATGCATAATAGGATCTCAACTTTTGCCTAATAATTTAATATATATATTAACCTTTTTAGAAAATTGAATATTTGACGTATTTATTAAACACAAGGTTAAAGTGGATGATATGAAATATAAATAAATTATGTATGTCTATATACTGATGCAAAAAATAATAATTTTTTTTTCTAAAGATATTTTTTAAAATTTGTTCTTATATTTTAAACATAATACTAATAAACATTTTTTATTTTTTATTATTTTTTAAAGGTTTTTTTTAAGTAAAAAAATTTATTAAAAGTTTAACAATTTAAGACTATTTTTGAGATAAAAATGCCTACAATTTTGATTAATTTCGCTAAAATTAAATAAGAATATCTATAAACCAGGGCGGTACGCAAATTACTGGTTGCCCCCCCTAATCTGGTCGCCAGGTGGTCCTCCGAAGATTTTTCTCTCTTCTCTGGACTTCCGAGAAGGGGGAAGGAAGCGTAGTGTCGAAAGAGAGGTTAATATTCTTTCATGATTGCCCGACCAAACATAGTTGGAGAGCAATCTATCACGAAAAAGAATTGACGTTTTTTGTCCCGTTAGATATATAGAGCTTTCCCAGAAATTTCTGTATTCGATTCGTTTTTCTGTTTCGATTGAGGCTCTGAGGCGAAACAAGGATTTCTGATTTTTTTTTTTTTTAATTTAGTCGAAGGCGAAGATGGAAACCGTAGGATATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTCGATCCCCTCCTCCAAATCCTCCAGAGGTTCTTCCTCCACTGCGCATTTGAACTGTGAAATATTTTATTTCTCATTGAGCAGTGATTTTTTTTATGTGAATTCGAGGAATTCTGTTCTTCATTTGGTATAATTTGGCTTGGGAATTTCTGAGGATCTGTTATTGCGTCTCATTTTACAGTTCGTCTTTCTTTGGTAGCATATTTTGATTTCAAGATTTTGAATATTGAATGAGAAGCATATCTCTAGGAAGAAACATTAGAACTGCTGGTTTAATTTATTTCAAGATTTTTCCCCCATTTTCTTTTCATGGATTCTTGGAGTTGTTTTTGCTAATTCTTTCTCAATGAGATAAAATTTCCAAAGTTCTTTTAATTCTCTGATGATAATCCTTGAATACATTACTAAAACTTCTTTTTATCTCTGTTCTTGGTTTTGTTGTTAAAGGGGCGCAGAGCCGAAGCAACTGGCATTTTCTGCAGCTCTTGGCATAACACTGGGATTGTTTCCCATATGCGGTATATACTCATTTACAATACACAGACTAATCATTTTTTACTGTTTATGTGGATAGTTCTAACTTCCAAGTAAAATTATGTTGAAATAATTCGACATCTTATTTTATGTTTCATTAACACAGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACCCCTCTAGAATTGAGGTACTTACCATATGCCTTCCCTAATTTATATTACTAGAATTGCTCATTATTTGTATATGGATGCGTTTCTTGAGTCAGAGTTCTATTGATTTTAATTTTTGCTCTGAAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGGAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGGTAAAGTTTCTTCTACTTACTAATATCAAGTAATATCAGTGTTGATGTTTTGAGGGTTGAGTGGAGTCCCATCTTGGCTAATTTATGGCTAATTTAAGGAATGATCATGGGTTCAGAAATAAGGAATACATCTCCATTGATATGAGGCTGGGAAACCAAAAGCAAAACCATGAGAGTGTATACTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAAAATAGTATTGGAGTCATGCCCTTAGCTTAGTCATGTCAATAGAATTCTTAAATGTCGAGCAAAGAAGTTGTGAGCCACGAAGGTGTAGTAAAAACTGACTCATGTGTCGATCAAATGGTGTACTTTGTTCAAGGGCTCTATAAAAGGAGTCGAGCCTCGATTAAGGGAGGCCGTTCGAGGGCTCCATAAGCCCCAAGGGAGGCTCTAGTGTACTTTGTTTGAGGGGAGGATTGTTAGGAGGGAGTCCCATGTTGACTAATTTAGGGAATAATCATGGGTTTAGAAGTAACGAATACATCTCCATTGGTATGAGGTCTTCCGAAGAAACCAAAAGTAAAGCCATGAAAGCTTAGGCTCAAAGTGGACAATATCATCCGAAGAAACCCAAAGTAAAGCCATGAAAGTTTATGCTCAAAGTGGACAATATCATACTACTGTGGAGGGTCGTGGTTTCTAACCTTGAGTTCTAATATGATTTGTACATTGTTGTTTTGTTGAATAAGGATTAGTAAACTGGTTTTTTTTTTCTTTTTTTTTGAAAAAAATCAATATTGGCAGTTGTTGGGATGGGCTGTTGCTGCGCCCTTAATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTCGTTCACAATCTGACGTCAAAATGAAGACGAGGGATGACTGATTTAATAAGAATCCCAGAAATGGCGCATCTCCTCCTCTAAACACTGCCCATTTGCATTTAACATGGTAACCTTCTTTGTATAAATGTATTACCATGGCCTTCAGTTGCTTCTTCGCTTTGTATGAACACAGTTTTGTGGATAAAAGTTTGATCAAAGTATCATAAAAGCTTGCAGGATGCAACTGTGATTGCAAGTCCCTTATTCATTGCGTTGTTGTTTTAGTGAACGTAAAATGTTGTAGCTTATGCCTTCGCCAAAT

mRNA sequence

ATGAGGCGCGCGCTACTCTCCGATAAGATCAATTTGGAGGGAAAAAGTTGTGGTCCTCCGAAGATTTTTCTCTCTTCTCTGGACTTCCGAGAAGGGGGAAGGAAGCGTAGTGTCGAAAGAGAGTCGAAGGCGAAGATGGAAACCGTAGGATATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTCGATCCCCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTTTCTGCAGCTCTTGGCATAACACTGGGATTGTTTCCCATATGCGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACCCCTCTAGAATTGAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGGAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGTTGTTGGGATGGGCTGTTGCTGCGCCCTTAATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTCGTTCACAATCTGACGTCAAAATGAAGACGAGGGATGACTGATTTAATAAGAATCCCAGAAATGGCGCATCTCCTCCTCTAAACACTGCCCATTTGCATTTAACATGGTAACCTTCTTTGTATAAATGTATTACCATGGCCTTCAGTTGCTTCTTCGCTTTGTATGAACACAGTTTTGTGGATAAAAGTTTGATCAAAGTATCATAAAAGCTTGCAGGATGCAACTGTGATTGCAAGTCCCTTATTCATTGCGTTGTTGTTTTAGTGAACGTAAAATGTTGTAGCTTATGCCTTCGCCAAAT

Coding sequence (CDS)

ATGAGGCGCGCGCTACTCTCCGATAAGATCAATTTGGAGGGAAAAAGTTGTGGTCCTCCGAAGATTTTTCTCTCTTCTCTGGACTTCCGAGAAGGGGGAAGGAAGCGTAGTGTCGAAAGAGAGTCGAAGGCGAAGATGGAAACCGTAGGATATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTCGATCCCCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTTTCTGCAGCTCTTGGCATAACACTGGGATTGTTTCCCATATGCGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACCCCTCTAGAATTGAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGGAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGTTGTTGGGATGGGCTGTTGCTGCGCCCTTAATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTCGTTCACAATCTGACGTCAAAATGAAGACGAGGGATGACTGA

Protein sequence

MRRALLSDKINLEGKSCGPPKIFLSSLDFREGGRKRSVERESKAKMETVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD

Homology

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BLAST of CmaCh04G030170 vs. ExPASy TrEMBL
Match: A0A6J1JSJ4 (uncharacterized protein LOC111487454 OS=Cucurbita maxima OX=3661 GN=LOC111487454 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.0e-93
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA
Sbjct: 1   METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS
Sbjct: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 225
           HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD
Sbjct: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 179

[Close]

BLAST of CmaCh04G030170 vs. ExPASy TrEMBL
Match: A0A6J1GMP3 (uncharacterized protein LOC111455361 OS=Cucurbita moschata OX=3662 GN=LOC111455361 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.2e-91
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+TRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA
Sbjct: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS
Sbjct: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 225
           HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP SQSDVKMKTRDD
Sbjct: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPHSQSDVKMKTRDD 179

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BLAST of CmaCh04G030170 vs. ExPASy TrEMBL
Match: A0A1S3B2V5 (uncharacterized protein LOC103485404 OS=Cucumis melo OX=3656 GN=LOC103485404 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.1e-78
Identity = 151/183 (82.51%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+ RPT WF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+G+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPRSQSDVKMK 224
           HEVL SIAH+LLGW VAAP ILGIGYLLFLPCFKILVRKF     SP  SP S +D+++K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

[Close]

BLAST of CmaCh04G030170 vs. ExPASy TrEMBL
Match: A0A0A0LSU8 (DUF2062 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G401460 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.0e-77
Identity = 152/183 (83.06%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+ R T WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+G+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAAS-----PRSQSDVKMK 224
           HEVL SIAH+LLGW VAAP ILGIGYLLFLPCFKILVRKFS  AS     P S +D+K+K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

[Close]

BLAST of CmaCh04G030170 vs. ExPASy TrEMBL
Match: A0A6J1JYI3 (uncharacterized protein LOC111489450 OS=Cucurbita maxima OX=3661 GN=LOC111489450 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.7e-76
Identity = 149/180 (82.78%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+TRPT WFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCG A
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLG LCHAPTVMLANFV TP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+GQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPRSQSDVKMK 221
           HEVL SIAHVLLGW VA P ILGIGY+LFLPCFKILVRKF     SP  SP S S+V++K
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGIGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

[Close]

BLAST of CmaCh04G030170 vs. NCBI nr
Match: XP_022990629.1 (uncharacterized protein LOC111487454 [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 6.2e-93
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA
Sbjct: 1   METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS
Sbjct: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 225
           HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD
Sbjct: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 179

[Close]

BLAST of CmaCh04G030170 vs. NCBI nr
Match: XP_022952761.1 (uncharacterized protein LOC111455361 [Cucurbita moschata] >XP_022952770.1 uncharacterized protein LOC111455361 [Cucurbita moschata] >KAG6602722.1 hypothetical protein SDJN03_07955, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.1 bits (884), Expect = 4.5e-91
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+TRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA
Sbjct: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS
Sbjct: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 225
           HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP SQSDVKMKTRDD
Sbjct: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPHSQSDVKMKTRDD 179

[Close]

BLAST of CmaCh04G030170 vs. NCBI nr
Match: XP_023521719.1 (uncharacterized protein LOC111785523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 2.1e-88
Identity = 174/179 (97.21%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+TRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA
Sbjct: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS
Sbjct: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 225
           HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP   SDVKMKTRDD
Sbjct: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP---SDVKMKTRDD 176

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BLAST of CmaCh04G030170 vs. NCBI nr
Match: KAG7033409.1 (hypothetical protein SDJN02_07465 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.8 bits (774), Expect = 2.5e-78
Identity = 159/179 (88.83%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+TRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA
Sbjct: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK       
Sbjct: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK------- 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRSQSDVKMKTRDD 225
                     LLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP SQSDVKMKTRDD
Sbjct: 121 ----------LLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPHSQSDVKMKTRDD 162

[Close]

BLAST of CmaCh04G030170 vs. NCBI nr
Match: XP_008441199.1 (PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 1.3e-77
Identity = 151/183 (82.51%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 46  METVGYTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 105
           M TVG+ RPT WF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 106 IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 165
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+G+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 166 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPRSQSDVKMK 224
           HEVL SIAH+LLGW VAAP ILGIGYLLFLPCFKILVRKF     SP  SP S +D+++K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

[Close]

BLAST of CmaCh04G030170 vs. TAIR 10
Match: AT1G33490.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-60
Identity = 113/154 (73.38%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 57  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 116
           WF++KI +PL+QIL+RGAEPKQLAFSAALGIT+G+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHAP 70

Query: 117 TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 176
           TVMLANF+ATP+ELSLVVPFLR GE ++G P FPLT DALKKVF+GQAS +V  SI + L
Sbjct: 71  TVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNAL 130

Query: 177 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAAS 211
           LGW +AAP ++   Y++FLPCFKILVRKFS   S
Sbjct: 131 LGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDS 164

[Close]

BLAST of CmaCh04G030170 vs. TAIR 10
Match: AT4G10140.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 218.4 bits (555), Expect = 5.9e-57
Identity = 114/176 (64.77%), Postives = 132/176 (75.00%), Query Frame = 0


Query: 53  RPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSL 112
           R   WFN+KI DPLLQIL+RG EPKQLAFSAALGITLG+FPICGV V LCG+A A LGS 
Sbjct: 7   RLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSS 66

Query: 113 CHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSI 172
           CHAPTVMLAN +ATP+EL+LVVPFLR GE ++G P FPLT DALKKVF+GQAS EV  SI
Sbjct: 67  CHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSI 126

Query: 173 AHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPRS-----QSDVKMKTRD 224
            + LLGW VA P      Y++ LPCF ILVRKF   AS +      ++++  K RD
Sbjct: 127 GNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRD 182

The following BLAST results are available for this feature:

BLAST of CmaCh04G030170 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G030170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSJ4	3.0e-93	100.00	uncharacterized protein LOC111487454 OS=Cucurbita maxima OX=3661 GN=LOC111487454...	[more]
A0A6J1GMP3	2.2e-91	98.32	uncharacterized protein LOC111455361 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]
A0A1S3B2V5	6.1e-78	82.51	uncharacterized protein LOC103485404 OS=Cucumis melo OX=3656 GN=LOC103485404 PE=...	[more]
A0A0A0LSU8	1.0e-77	83.06	DUF2062 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G401460 PE=...	[more]
A0A6J1JYI3	9.7e-76	82.78	uncharacterized protein LOC111489450 OS=Cucurbita maxima OX=3661 GN=LOC111489450...	[more]

BLAST of CmaCh04G030170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990629.1	6.2e-93	100.00	uncharacterized protein LOC111487454 [Cucurbita maxima]	[more]
XP_022952761.1	4.5e-91	98.32	uncharacterized protein LOC111455361 [Cucurbita moschata] >XP_022952770.1 unchar...	[more]
XP_023521719.1	2.1e-88	97.21	uncharacterized protein LOC111785523 [Cucurbita pepo subsp. pepo]	[more]
KAG7033409.1	2.5e-78	88.83	hypothetical protein SDJN02_07465 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008441199.1	1.3e-77	82.51	PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo]	[more]

BLAST of CmaCh04G030170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33490.1	1.9e-60	73.38	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062...	[more]
AT4G10140.1	5.9e-57	64.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018639	Domain of unknown function DUF2062	PFAM	PF09835	DUF2062	coord: 66..204 e-value: 2.8E-8 score: 33.7
None	No IPR available	PANTHER	PTHR35102	E3 UBIQUITIN-PROTEIN LIGASE	coord: 55..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G030170.1	CmaCh04G030170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane