CmaCh04G029850 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAACGTAAATTTGCCTGAAATTCGACGTCAACTCTGCTCGCCAAACGCCACCACAGCTGACCGATGATGTTCGTGCCCTATCGACTCCCGCCAAATCCCGCTACCGGTTATCGCCGGTGACCGCTCCACATTTTCGGTATTCTTCCCCTTTTTGTCGAACAAACATAAACTCAGACCCAAAACTCTTTTTCTCGAACAAAAAACAGTAAACAAATATCTCTCTTCGTTGGTTACTTCGAGACTTCCTTCTTCTTCAACCTCTTTCCGATTCCATCATTTCGGAGTTCGATTCACGCATCGAATTGGACGAGTAGAGTCTTGAGCTATTTCATTTCTCCGCTAATTCCATGCGAGCTGTCTGTTTCTATCGAAATCAACGACAATGAGCGCGGTGAATATCACTAACGTTGCAGTTCTCGACAACCCATCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGGTATTCCCTCGATCTACTTTTTGTCGCTTTTTATTTCCTTTCTGTGTTCAATCATTATTTCCCTTTCATACTATTTCTATTCAGTTTCTATTAGGGCTTACTTTCTAGGGTTAATCTGTTTCGAACTTCTTGTATAATTGACTGTGAATGCAAGCTGGTAAAAGTACTAATGTTAGCTGGTAAAAGCTAAACTTACAAACGAGTTTGTGGTTGCTAAACTGAATATAAATTTTTCAATGTTGCGTCTTGTGTCCAAGGAATTTCTACTTACAGCGGACGAATTACTTGACGGAATTAAAAATGTGGTTTGATTGGAAAAGGCAGTTCAAGAGGTCATTTATGAGAGTATATGGCCTTAAAAATTTTGGGTTATGAAATTGTTCCTTGGTTTTTAGATCGACAATGAATAATATTCTCTTGATCTCTCTATTTGATTTGTCTAAGATGTTTGGGATATTGTAGTTTTTGTCACCTCTTTATGGGCGCTCTAGTTTATATCATTCTAGTGAGACAGGGAGCTGATGTAATTATTTCTAGGCTTTACCCTTAACATTTGGTGCAAACTATCAATGTTCTGGGACTGAATATTTGATATCAGCAAGATGGCTGGTTAACTTAGTTGACCTTTTTTTAGGTGAGAGTCTCTTATTGTCGTCACGGTTCAAGTTTTTACTAACAAGGTTGCAAAATTCTGAGCATACTTTCTGAACCTGTACCTGGAAATACATTTGGAAAGCGTAGGACTCTTGTTTTGTATGTTTTATTGTATATTATTCAGTATTCCATTGATTATCATATCAAGATTCCTAATGTTTTCCCTCTGCATTCGGTGCCACACCATGTAAAGATTGAAGATAGGTAATTGATGTTGTTAGCCCGATATATGTTGATGGATAGGATATTGCAAAATTTTAATTTATTGCATCTGTAGCGGAGTAATGGATGTCAGCCGAATATTTACCTGAGTTTATTTATATATCTTGGTCAATGGGATTTTCGTATTAGCATATCCAACAAATAATTTTGGCATATCCGGAGTATGATTAACTTTTGTGATGCTAGCAAAATTAGATATGCTGCAGTTGCTTTCTTGGTTTCAATTTAAAAAATTATTTTGATAGAGGTTTATGATGAAACATAAAAAGTAATTGTTTGATGTGGGTATGGTTTTGTTATTGGATATTTAAAGGGCACCATTTTAGTTCTCCAACTTTTTACTTCACGTTGAACTTTAGATATCTCAGAAGAGACTGTGTCCTTTGTTTAGTCTATACTCCAGCAGCAAGGTCTATAATTGATTAGGCTCTTTGAGGTACTCGTGGTATATGTTGAAGAAAATTCTTGATGGTTGTAGCATAGAACTCTGGTGGTAGGTGTTAACGGGATGGCAGGGAGCAGAAGCACAATCACTTTATGTGGTATGATATGGAATAATGACTGAAGGTCAATGAAATCAATCACATTTTTTGCTTTGACCAACCCACACTCTGTTTTTACGGCTTCAATGAATGATTTATTGAAGATGTTCTTACAGAAATTCAGATTTGCTTTTATTTTTAGGGTGCCTGTTAAGAAACACAAGTTGTATACAGTATATTAAGTAAATGGAGAGAGCATTTATGCAAAGACAACCAATATATTTAGGACATATCATGTCAGACTAACAAAAAATAAAGTTCAGGCAATGTTTGATTGGTCAACACCCAATGCATGCTTCAATCCAGGAGCTTAAGGTTTTCCTTGCTAACAAGTTACTATTCGAAAGATTGTGGCTAGGTATAATTCTATAGCATGGCCATTAGAACAGGAACTAGATAGGGACTAGTTTAGATAGAATTACAGGGCCAAATTTTCTTTGAATCAAGCTCATGTTAGCCATGACATAAATACCAACATCAGTTTTGCAGGATTTCTTAGAAAAGTTTGTAATTGAAATGAATCCTTCTAGACTCTAGTTACGGGTTGATGGTGTGTCAAATCCAACCTTGGAATATTTTTGAGTTTCTTTCTTTCTGAAGCAGCCAAAGATCTCTACAAGCTTTTCTACACAAAATTCTAGCTTTATATTTTCATTATTGTATTATTTATAATTCCATATCTTTTTCTACTATATCGTGTCGTATACCTCACAGTAAAAAGCCCCCGCTACATGTTTAAGCACCACATGACCTATTGCAGTCGGATGTAATTGTTTCCTAAAAAAAGGGAAAATTTGGTTAAGCAAGAGCAACTAGATTCTATTGTATGATGAGACGTGGATATTTCTTTAAGATGTGTGAATTTGCAGTTTTTTCTATGACACCTTCGAGAAAAGTATATCCAATTGATGAATGGAAACGTTCACTCTGTTATTTAGAAGGAAATTTGAGTGCAAGTATTTAGTTTATTCTTAAGTGTGATACGCACTTTAGTTTATAAAAAAAGTTAGTTTTATTATTGAACTCTGTACTTCCCTGGGTAAAAATTTATCATATTACGTGTGGCATCTATATGCATTTTTTTAGAAGTCTAGTCAATTATATTGGTGATCATTGGACTTGCAGTAGTACCCTTTTGACTGAATCTTTCTGTCCCGACTGTTTTCTCTTTCTGCTTCAGATTTGGAATGGAAGCTAATTTACGTAGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGTCCTGTCAATGTTGGCAATTATCGTTTTGTATTGCAGGTAAATTTCCTTGACCAATTTCTGTATTTTGTTAATACACCATCTTGTTCATAGAGATAACCTCGCTATCCCCTCCCATATGGATCATTCCCAGGCCGACCCTCCGGACCCATCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGTCAGGAGTTTATCCGCGTTGGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAGCCAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTATCTGATAAACCCAGGGTTACAAAATTTCCCATTAATTTTTACCCTGAGACCAATGATAGTGGAGAGGAACCTCCTCCTAACGATCCTGTATTGGCTGAAACTGACGGTGACGATCAACTACCCGCTTCTCCTGAACATCCTTCAGACGAACAAATTCCTTAGATTTAGCTTTGTTGAAGGAACTTCCACCCAACTAAATCATGGAAATTTTCTGTCACGGTCGTCACTTGTTCTTAGAAATCATCATTGCTGGATTCTGGATGGTTTTGAGCTCCAGAAGCTGAGATATTTTTGAGCATATGATGGTTGGAATGCAGTGTTCAACGTGTCTTCAACTCAGTTTGACTTGTATTTCTATGGTTTGTACTTGTACAAGGACGGTCCAAATTCATTATTTTGAAGTCCTTTTTTGATAGCTAAACAACTTTTGGTCTATTAGTTAAGAAGTCAGATAAGCAATGGTGGTGAGCGAATCACCGTGGTGTTAGAAGAGAGTGAAAGCCATGAAGAACTGTGAGATAGGAGTATGTTCATATGTGGAACCGTGTTGCATTGACGACAAGGAATCCGCCTTTCTCCAGATATGGTAGTTCTGTGAATCTGATTCTAATTTGGATCTGCTATACACCTTGTGACATTTAGTTGATTGCAGTTTGTCCCATGGGCTCTCCAAAGAATGGTTACGTCTTTGTTGATTTGTGTCCTCCCAGTGGTCAGCAAACCATTCCCAGTAGTGGATAGGCTTTCAGCTTTCCCCTGCACAAGTCAAACAGGCCAGTTAAGCTAGGAAAATGGACAAGTCTGACCTGTTTACCAAACTTGCAATTCCACATAACATGGCTCGTAGTAGTCTCCCTTTTTTCCTGCAAAAACAGCACATAACTTCAGTATCCATCCCCTTTTTCGTAAACATTGCTTTTGGTAGGAATTGTATCGTTCAAATTCTTCCACAAACAATATCTTGGAATAGCATGAATGAGCACACATGACTTCCAAAATTGGTCTTTACTGCAATGTCTTTGCTTCTCATTTTAGACGCAGGACTCCCAAGACATTAATTTGGAATCTACATTTTAATTAA ATAACGTAAATTTGCCTGAAATTCGACGTCAACTCTGCTCGCCAAACGCCACCACAGCTGACCGATGATGTTCGTGCCCTATCGACTCCCGCCAAATCCCGCTACCGGTTATCGCCGGTGACCGCTCCACATTTTCGGTATTCTTCCCCTTTTTGTCGAACAAACATAAACTCAGACCCAAAACTCTTTTTCTCGAACAAAAAACAGTAAACAAATATCTCTCTTCGTTGGTTACTTCGAGACTTCCTTCTTCTTCAACCTCTTTCCGATTCCATCATTTCGGAGTTCGATTCACGCATCGAATTGGACGAGTAGAGTCTTGAGCTATTTCATTTCTCCGCTAATTCCATGCGAGCTGTCTGTTTCTATCGAAATCAACGACAATGAGCGCGGTGAATATCACTAACGTTGCAGTTCTCGACAACCCATCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGATTTGGAATGGAAGCTAATTTACGTAGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGTCCTGTCAATGTTGGCAATTATCGTTTTGTATTGCAGGCCGACCCTCCGGACCCATCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGTCAGGAGTTTATCCGCGTTGGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAGCCAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTATCTGATAAACCCAGGGTTACAAAATTTCCCATTAATTTTTACCCTGAGACCAATGATAGTGGAGAGGAACCTCCTCCTAACGATCCTGTATTGGCTGAAACTGACGGTGACGATCAACTACCCGCTTCTCCTGAACATCCTTCAGACGAACAAATTCCTTAGATTTAGCTTTGTTGAAGGAACTTCCACCCAACTAAATCATGGAAATTTTCTGTCACGGTCGTCACTTGTTCTTAGAAATCATCATTGCTGGATTCTGGATGGTTTTGAGCTCCAGAAGCTGAGATATTTTTGAGCATATGATGGTTGGAATGCAGTGTTCAACGTGTCTTCAACTCAGTTTGACTTGTATTTCTATGGTTTGTACTTGTACAAGGACGGTCCAAATTCATTATTTTGAAGTCCTTTTTTGATAGCTAAACAACTTTTGGTCTATTAGTTAAGAAGTCAGATAAGCAATGGTGGTGAGCGAATCACCGTGGTGTTAGAAGAGAGTGAAAGCCATGAAGAACTGTGAGATAGGAGTATGTTCATATGTGGAACCGTGTTGCATTGACGACAAGGAATCCGCCTTTCTCCAGATATGGTAGTTCTGTGAATCTGATTCTAATTTGGATCTGCTATACACCTTGTGACATTTAGTTGATTGCAGTTTGTCCCATGGGCTCTCCAAAGAATGGTTACGTCTTTGTTGATTTGTGTCCTCCCAGTGGTCAGCAAACCATTCCCAGTAGTGGATAGGCTTTCAGCTTTCCCCTGCACAAGTCAAACAGGCCAGTTAAGCTAGGAAAATGGACAAGTCTGACCTGTTTACCAAACTTGCAATTCCACATAACATGGCTCGTAGTAGTCTCCCTTTTTTCCTGCAAAAACAGCACATAACTTCAGTATCCATCCCCTTTTTCGTAAACATTGCTTTTGGTAGGAATTGTATCGTTCAAATTCTTCCACAAACAATATCTTGGAATAGCATGAATGAGCACACATGACTTCCAAAATTGGTCTTTACTGCAATGTCTTTGCTTCTCATTTTAGACGCAGGACTCCCAAGACATTAATTTGGAATCTACATTTTAATTAA ATGAGCGCGGTGAATATCACTAACGTTGCAGTTCTCGACAACCCATCGCCCTTCTCTACCCCTCTTCAGTTTGAGATCTCCTACGAGTGTTTGTCTCCTCTCAAATACGATTTGGAATGGAAGCTAATTTACGTAGGGTCTGCTGAGGTTGAGACTTATGATCAACTCTTGGAGTGTGTTCTTGTGGGTCCTGTCAATGTTGGCAATTATCGTTTTGTATTGCAGGCCGACCCTCCGGACCCATCCAAAATTCCTGAAGAAGATATCATTGGCGTAACTGTACTTCTGTTGACCTGCTCATATATGGGTCAGGAGTTTATCCGCGTTGGTTACTATGTAAACAATGATTATGATGACGAGCAGCTCAGAGAAGAACCTCCAGCCAAAGTCTTGATCGATAGGGTTCAGAGAAACATTCTATCTGATAAACCCAGGGTTACAAAATTTCCCATTAATTTTTACCCTGAGACCAATGATAGTGGAGAGGAACCTCCTCCTAACGATCCTGTATTGGCTGAAACTGACGGTGACGATCAACTACCCGCTTCTCCTGAACATCCTTCAGACGAACAAATTCCTTAG MSAVNITNVAVLDNPSPFSTPLQFEISYECLSPLKYDLEWKLIYVGSAEVETYDQLLECVLVGPVNVGNYRFVLQADPPDPSKIPEEDIIGVTVLLLTCSYMGQEFIRVGYYVNNDYDDEQLREEPPAKVLIDRVQRNILSDKPRVTKFPINFYPETNDSGEEPPPNDPVLAETDGDDQLPASPEHPSDEQIP Homology
BLAST of CmaCh04G029850 vs. ExPASy Swiss-Prot
Match: Q9LS09 (Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.2e-74 Identity = 144/192 (75.00%), Postives = 159/192 (82.81%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy Swiss-Prot
Match: Q9C9M6 (Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.4e-74 Identity = 144/195 (73.85%), Postives = 159/195 (81.54%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy Swiss-Prot
Match: Q9V464 (Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.8e-54 Identity = 105/193 (54.40%), Postives = 137/193 (70.98%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy Swiss-Prot
Match: Q2KIG1 (Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.5e-53 Identity = 102/177 (57.63%), Postives = 126/177 (71.19%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy Swiss-Prot
Match: Q69DB9 (Histone chaperone asf1a-A OS=Xenopus laevis OX=8355 GN=asf1aa PE=1 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.3e-53 Identity = 99/172 (57.56%), Postives = 124/172 (72.09%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy TrEMBL
Match: A0A6J1JRI5 (histone chaperone ASF1B-like OS=Cucurbita maxima OX=3661 GN=LOC111487689 PE=3 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.0e-106 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy TrEMBL
Match: A0A6J1GXI9 (histone chaperone ASF1B-like OS=Cucurbita moschata OX=3662 GN=LOC111458390 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 6.0e-106 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy TrEMBL
Match: A0A6J1FDV1 (probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111444636 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 8.9e-102 Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy TrEMBL
Match: A0A0A0LMW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404990 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101 Identity = 186/193 (96.37%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of CmaCh04G029850 vs. ExPASy TrEMBL
Match: A0A6J1JR24 (probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111489050 PE=3 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 3.4e-101 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of CmaCh04G029850 vs. NCBI nr
Match: XP_022990954.1 (histone chaperone ASF1B-like [Cucurbita maxima] >XP_022990955.1 histone chaperone ASF1B-like [Cucurbita maxima]) HSP 1 Score: 394.8 bits (1013), Expect = 4.2e-106 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of CmaCh04G029850 vs. NCBI nr
Match: XP_022956796.1 (histone chaperone ASF1B-like [Cucurbita moschata] >XP_022956806.1 histone chaperone ASF1B-like [Cucurbita moschata] >XP_023524708.1 histone chaperone ASF1B-like [Cucurbita pepo subsp. pepo] >XP_023524716.1 histone chaperone ASF1B-like [Cucurbita pepo subsp. pepo] >KAG6602691.1 Histone chaperone ASF1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033378.1 Histone chaperone ASF1B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 393.3 bits (1009), Expect = 1.2e-105 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of CmaCh04G029850 vs. NCBI nr
Match: XP_038884219.1 (probable histone chaperone ASF1A [Benincasa hispida] >XP_038884220.1 probable histone chaperone ASF1A [Benincasa hispida]) HSP 1 Score: 381.7 bits (979), Expect = 3.7e-102 Identity = 187/193 (96.89%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of CmaCh04G029850 vs. NCBI nr
Match: KAG6578356.1 (putative histone chaperone ASF1A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101 Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of CmaCh04G029850 vs. NCBI nr
Match: XP_022938359.1 (probable histone chaperone ASF1A [Cucurbita moschata] >KAG7015941.1 putative histone chaperone ASF1A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 379.4 bits (973), Expect = 1.8e-101 Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of CmaCh04G029850 vs. TAIR 10
Match: AT5G38110.1 (anti- silencing function 1b ) HSP 1 Score: 280.8 bits (717), Expect = 8.3e-76 Identity = 144/192 (75.00%), Postives = 159/192 (82.81%), Query Frame = 0
BLAST of CmaCh04G029850 vs. TAIR 10
Match: AT1G66740.1 (ASF1 like histone chaperone ) HSP 1 Score: 278.9 bits (712), Expect = 3.1e-75 Identity = 144/195 (73.85%), Postives = 159/195 (81.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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