CmaCh04G029800 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAAGGTGTAGATCAGCAAGACCCCTTGTGCCCCATGGAGAAGCTATGGCTAGCAGCAGAAACACGAAGCCGATGGCGACGTCGTTGAACGCATCGCCGCGTTCGTGTCATGTTTCGTTTATGGTTCATCACCAAGAGAGGGGGAAGATGGCTCCGCCGAACCAAAGAGTTGTTCATGAGGCCATGAACGTTCACGAGGCTAAGTTTTGGAACGGTTACGGCGTCGTTGTCGACGAACATATCGATCGGAAGGCTGCTATGTACATATCGTCTGTGCAAGAACGGTTTAGACTTGAGGGGTTGATCAGCTGA ATGGATTCAAGGTGTAGATCAGCAAGACCCCTTGTGCCCCATGGAGAAGCTATGGCTAGCAGCAGAAACACGAAGCCGATGGCGACGTCGTTGAACGCATCGCCGCGTTCGTGTCATGTTTCGTTTATGGTTCATCACCAAGAGAGGGGGAAGATGGCTCCGCCGAACCAAAGAGTTGTTCATGAGGCCATGAACGTTCACGAGGCTAAGTTTTGGAACGGTTACGGCGTCGTTGTCGACGAACATATCGATCGGAAGGCTGCTATGTACATATCGTCTGTGCAAGAACGGTTTAGACTTGAGGGGTTGATCAGCTGA ATGGATTCAAGGTGTAGATCAGCAAGACCCCTTGTGCCCCATGGAGAAGCTATGGCTAGCAGCAGAAACACGAAGCCGATGGCGACGTCGTTGAACGCATCGCCGCGTTCGTGTCATGTTTCGTTTATGGTTCATCACCAAGAGAGGGGGAAGATGGCTCCGCCGAACCAAAGAGTTGTTCATGAGGCCATGAACGTTCACGAGGCTAAGTTTTGGAACGGTTACGGCGTCGTTGTCGACGAACATATCGATCGGAAGGCTGCTATGTACATATCGTCTGTGCAAGAACGGTTTAGACTTGAGGGGTTGATCAGCTGA MDSRCRSARPLVPHGEAMASSRNTKPMATSLNASPRSCHVSFMVHHQERGKMAPPNQRVVHEAMNVHEAKFWNGYGVVVDEHIDRKAAMYISSVQERFRLEGLIS Homology
BLAST of CmaCh04G029800 vs. ExPASy TrEMBL
Match: A0A0A0LQT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406070 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.7e-25 Identity = 75/113 (66.37%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of CmaCh04G029800 vs. ExPASy TrEMBL
Match: A0A5A7UMY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00160 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24 Identity = 76/114 (66.67%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of CmaCh04G029800 vs. NCBI nr
Match: KAG6602687.1 (hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194.5 bits (493), Expect = 4.6e-46 Identity = 97/105 (92.38%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of CmaCh04G029800 vs. NCBI nr
Match: KAA0056544.1 (hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa] >TYK02718.1 hypothetical protein E5676_scaffold1154G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 121.3 bits (303), Expect = 4.9e-24 Identity = 76/114 (66.67%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of CmaCh04G029800 vs. NCBI nr
Match: KAE8652260.1 (hypothetical protein Csa_022307 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 7.1e-23 Identity = 65/94 (69.15%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of CmaCh04G029800 vs. NCBI nr
Match: KAG6578363.1 (hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.5 bits (249), Expect = 9.0e-18 Identity = 69/115 (60.00%), Postives = 72/115 (62.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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