CmaCh04G028440 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G028440
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclin-B1-2-like
Location	Cma_Chr04: 18989360 .. 18991701 (-)
RNA-Seq Expression	CmaCh04G028440
Synteny	CmaCh04G028440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGTTTTATATAAATACCAAAACGATACCAATTCGCAGTTCGCAGAGGCACAGCTTTCCGTTCTCGACTTGCTGAATAAGTTTTCTCTCAACTTGCTCCTTGAAGAAGAAAAATGGAATCTTCGAAGACAATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTTGGGCTCCAAGGCGTTAAGAGCGACCTCGTCGGGTCTCATCCTGTCGAATCCCTCTACGAAAGTGTAATTTCCTTTCCTTCTCTTTCTATCGCTGTTTTATACAATGTGGAAAAGCGGACTGGAAGTTTCAATCTAAGTTGCCCTATTTGATTTCTGTGTGGATTTTGCTGTTTATTTTTTTGCAGTTAGACTAGATTGTTATTAGAAATAGAATCTAGATTCGACGGAGCTGATGAACCACCGTTTGCCCATGTTTCTCGGATTAGGAACTTGTAACTTGACGTTTTATTTCCTGTTATTATGGTCAATTCTCTCTTTCTATCCCCATATTTCAATATTTTGGGTGTCCAATCTTGCAAATGGACAGTGCGCAAGTAGGTTCTGCCCTCAATTAGATTTCTATGGAGAGGACTAAGAGCAGCCATATTCTTTGGAACTTGTAATTAGTGACCATCCAGCATTCAGGAGGGGGGATACTTAGGAAAAGCACCGAAAAGTCTCTTCTGACTTGATTATAGGGTTGGGGTGGGATGGTTGTCCCTTTTCTTTCTCTTTCTTCATTTGCTAATAGAATTCTTTATATCCAACATGAATTTCTTACGGCAGCACCTGAGGGGCATTAGTTTGCACTCAAAACATTTATGAGATAAACACCATAAATCTTTCAAACAATTTTAGACATTTAAGTTGGTTTAGTCATAATGAACGGTATCCACCAAGAAAGGTGTATCAACCACAGTTTTTTCTAATTGGTTGAGTCAATTTATTTTAATTTGATACATGTATATCCTTGTTTTCATGCTTCAGACGAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGGTATGGTTTTTCTCCTTGCATTGATGCTGGATCTCTGTTGGTGTGTTCTAAATTCGAGTATTAGTGAAAAGGCCAAAATCTGCTGTTTTGGTTATGCATTTTATTTTATTTTATTTTATTTTCAACTTTAATCACATTGCTAATCGTTGTTTTATAATGATTTGGTGGGGAGCAAAAAGGTCATAGTTCACTCCACTGACTCTTCTACCTCATGTGATTTGCTCTCTTCGTACACATGTTAAATTTAGTTCTCTGGAAGTGTGGTGGGAGCACCTTTCCCCCTCATCCCTTGTTATGCTAATGACATTAAAATAGGATCTCTTGTGGAATTAATGTTTGATGTGCATGAATTTAAATGGGGAGACTAAAATCTGGCATCTACTTTTCTTTTCTTTTATTTTCACCAACATTTCAACTTGTGATGCCAGTTAAGTTAATTCTAGCTGTTTGTCTAGTTGGAATTTGAAAATCATTGCTAATATAATTTATATGCTAATTCAACGCTATTGCAGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAAATGAGAACTTATGAAGTGACCTAGATCCTAATAGCTCATCTGATTCTGTTGTTCACTATATTCTTTTGCATCATTCATGAGAGTTTTCAATTACCTTAAATAGTTCTTTTAATCTTAACAACTCTCTTTATGACTATCTGACATTGGTGGGATGATTAAATCCATGAAGTATGGTCGGGTTTAGCACAATTAGAAAAATAGTATTCAGGGACCTTCACTTGATCTTATTCCTCACTTTTAACCATCCATCTTGCGACTACTAGCACATGTCTGTTGGATGAAGTTCGCAAGAGTTTCCGCTGCTTCCAATAACCAATATCACATAGAATATTCCATCCACTAGTCTTTATGCAAGATTGCAGCCACTCATTTCCACAAGGGATGTTTGCTTTCACTTTTTTTTTTTTTTTTCACTAAACATAATGAATCTGTGTTTTCTAGTCCTATCTCGCCGTGTTTTCATTATTCTATATATACCCACTTTAGATAATAGTCTTTGCTGGTGTTTATTTACAACGTCCTATGTCATTGTCATTTGCAGACCCAAGAGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

mRNA sequence

CTGTGTTTTATATAAATACCAAAACGATACCAATTCGCAGTTCGCAGAGGCACAGCTTTCCGTTCTCGACTTGCTGAATAAGTTTTCTCTCAACTTGCTCCTTGAAGAAGAAAAATGGAATCTTCGAAGACAATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTTGGGCTCCAAGGCGTTAAGAGCGACCTCGTCGGGTCTCATCCTGTCGAATCCCTCTACGAAAGTACGAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGAGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

Coding sequence (CDS)

ATGGAATCTTCGAAGACAATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTTGGGCTCCAAGGCGTTAAGAGCGACCTCGTCGGGTCTCATCCTGTCGAATCCCTCTACGAAAGTACGAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGAGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

Protein sequence

MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

Homology

[Close]

BLAST of CmaCh04G028440 vs. ExPASy Swiss-Prot
Match: Q0DWQ7 (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGL-QGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTY 60
           M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ DLD QILS+FQRPPG +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

[Close]

BLAST of CmaCh04G028440 vs. ExPASy Swiss-Prot
Match: Q55G18 (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-13
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 23  LQGVKSDLVG-SHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPP 82
           L+   S++ G SHPVES+     +TE ++K   + N +G+   +  ++++QI S+F+R P
Sbjct: 14  LRNESSNVKGLSHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP 73

Query: 83  GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
             + SSM+GLE + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 74  -TLQSSMVGLETILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

[Close]

BLAST of CmaCh04G028440 vs. ExPASy Swiss-Prot
Match: Q3SZV5 (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-12
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

[Close]

BLAST of CmaCh04G028440 vs. ExPASy Swiss-Prot
Match: Q9Y244 (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

[Close]

BLAST of CmaCh04G028440 vs. ExPASy Swiss-Prot
Match: Q9CQT5 (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

[Close]

BLAST of CmaCh04G028440 vs. ExPASy TrEMBL
Match: A0A6J1JRS1 (cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 8.8e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. ExPASy TrEMBL
Match: A0A6J1GWZ3 (cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.7e-74
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. ExPASy TrEMBL
Match: A0A6J1BZ23 (cyclin-B1-2-like OS=Momordica charantia OX=3673 GN=LOC111006772 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.7e-73
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. ExPASy TrEMBL
Match: A0A0A0KUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 8.3e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. ExPASy TrEMBL
Match: A0A5D3BR37 (Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           M+SSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: XP_022989933.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 289.3 bits (739), Expect = 1.8e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: KAG7033243.1 (Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.1 bits (736), Expect = 4.1e-74
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: XP_022956483.1 (cyclin-B1-2-like [Cucurbita moschata])

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 139/141 (98.58%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: XP_023541108.1 (cyclin-B1-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTG LDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGGLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: XP_038889455.1 (cyclin-B1-2-like [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 5.9e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. TAIR 10
Match: AT5G38650.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-62
Identity = 108/141 (76.60%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YES ++++EEMKR+++ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-62
Identity = 108/141 (76.60%), Postives = 128/141 (90.78%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YES ++++EEMKR+++ +TYG
Sbjct: 291 MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 350

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 351 AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 410

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 411 FHHGMEVRLGLSKGPASPSFM 431

[Close]

BLAST of CmaCh04G028440 vs. TAIR 10
Match: AT1G67250.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-61
Identity = 102/141 (72.34%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKS+++GSHP+ES YES ++++E +KR ++ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD+DRQILSRFQRPPGPIPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLG+SKGP+ PSFM
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. TAIR 10
Match: AT1G62920.1 (CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10
Identity = 34/71 (47.89%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 62  AFPLKMDLDRQILSRF------------------------QRPPGPIPSSMLGLEALTGS 109
           A PLKMDLDR IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

The following BLAST results are available for this feature:

BLAST of CmaCh04G028440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0DWQ7	4.0e-24	53.04	Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1	[more]
Q55G18	1.9e-13	39.64	Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po...	[more]
Q3SZV5	2.7e-12	37.07	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1	[more]
Q9Y244	1.7e-11	36.21	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1	[more]
Q9CQT5	1.7e-11	36.21	Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1	[more]

BLAST of CmaCh04G028440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRS1	8.8e-75	100.00	cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1	[more]
A0A6J1GWZ3	5.7e-74	98.58	cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1	[more]
A0A6J1BZ23	3.7e-73	97.87	cyclin-B1-2-like OS=Momordica charantia OX=3673 GN=LOC111006772 PE=4 SV=1	[more]
A0A0A0KUK6	8.3e-73	96.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1	[more]
A0A5D3BR37	1.4e-72	96.45	Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 P...	[more]

BLAST of CmaCh04G028440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989933.1	1.8e-74	100.00	cyclin-B1-2-like [Cucurbita maxima]	[more]
KAG7033243.1	4.1e-74	99.29	Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956483.1	1.2e-73	98.58	cyclin-B1-2-like [Cucurbita moschata]	[more]
XP_023541108.1	1.2e-73	98.58	cyclin-B1-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_038889455.1	5.9e-73	97.87	cyclin-B1-2-like [Benincasa hispida]	[more]

BLAST of CmaCh04G028440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38650.1	1.0e-62	76.60	Proteasome maturation factor UMP1	[more]
AT5G38660.2	1.0e-62	76.60	acclimation of photosynthesis to environment	[more]
AT1G67250.1	4.2e-61	72.34	Proteasome maturation factor UMP1	[more]
AT1G62920.1	9.8e-10	47.89	CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR00801...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008012	Proteasome maturation factor Ump1	PFAM	PF05348	UMP1	coord: 15..129 e-value: 3.4E-34 score: 117.5
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 1..141
None	No IPR available	PANTHER	PTHR12828:SF8	BNAA07G25120D PROTEIN	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G028440.1	CmaCh04G028440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex