CmaCh04G028180 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G028180
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTir-nbs resistance protein
LocationCma_Chr04: 18870021 .. 18873234 (-)
RNA-Seq ExpressionCmaCh04G028180
SyntenyCmaCh04G028180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGCATCACATTGAAGGGTGAAGAAGAAGCACTCTACACAAGTGAAAGTCGGAGCAATAATAGGCCGTCTACCAAACGTGGATACAATGGTGACAAAAGAAGTTACAAAGGAACTTCACAACCCGAGAGAGCTCAGAAAAACGACAACAAGAGTTTCCAAGGAAAGAGATTTGAAGGTATTTGCTATAATTGCGGGAAAAAGGGCCACATGTCTAGAGATTGTTGGTCCAGTAAAAAGTCGGTTGAAAGCAATGTGGCAATATCCAAAAAGAAGATAGAGGATGAAAGGGATGTAGAGGTACTATGTCCAATAATAGAAGACGAGCTAGCACTCATGGCAATGATGGAAGAGCATATCGATTACGAGGATGACTGGATCATTGATTCAAAATGCTTAAACCACATGATTGACGATCAAAGCGGTGCAATGAAAGAGGGGTAACCCTCAGAGAAGGAAGAATTACCCGACCTTGAGCTAACTGAAAAAATTATTTTACAGAACACAGAGGAGCAAACGGAAGAAATTCTTTTACAGAACACAGAGGAGCAAGCGAAAGAAATTTTTTTATAGAATACAAAGGAGCAAATGGAAGAAATTCTTTTATAGAACACAAAGGAGCAAACGGAAGAAATTCTTTTACAGAACACAAAGGAGCAAACTGAAGAGATTCTTTCACAAAAGACGGGGGAGCAAATTGTACACATTTGCTTAAGTGTTGATGTGCCTGAAGATTCAAGTGACACTAGTGTTGGTGAGCAAGAAGTGACTCAACCAAGCGAGACTAGTGAAAATGAAATGACACCTCAACAACTCAGACATTCAAAAATAATCCTAAAGGCAAATCCAGAGTATGTCAATGCAGTAGAAGACGAAGTTAATGAGCCGGAGACATATGAAGAAGCATCACAAAACTCAGCTTGGCAGAAAGCGATAGAGGAAGAAACTATAAGGCAAAATAAGACCTAAAGAATTGTTTAAAAGAAACGGGTGTCATATCCCCAAGAGGAGCCCAATTGACCCAAAAGATATTCCAATCAAACCAAATAAGATTTAATGGTAATTAAAAAAACTGTACACAGAGGTGTGATCTAATAAGGCTACACTGCACCCAAGGGCGGGTACGAGGTTGACTCTCACAACTTGTTGGGTACTGGGAAGGAAATATGACAAGGAAATACGAACCAAGATATAAGGAAAAACACAAGGATGACCAAGAAAGACTTTAAGTACATGGCCTTAAGGCAGGACAAAAGGCCACAAGGGAAAATCAGAAAAACATGTTTGAGAAGGAGAAATCGATGCAAGGTCCCTCAAGGAACTTGGAAGGACATAACTAAGACCAAGTACTCCTCCCATGCATGGTAATAAAAGTGAACTTTCAAGGACGAAAGTTTTTAAGAGGGGAGAATTTGTAAGAGCCCAAGTAAGACTAAAGATACTCGGGTCAGTTTAGTTTTAAGGGATCCAAAAAAAGGACTAAGAGACCGAAGGAAGGTTAATGGGCCAAACGAAGAGATTTTCAATACCCTAGCAAGAAATTCTAAGGATTCAAGTCTTTGAAAAAGAAATAGTAATTACTCCGAGGAAAGACGGACTTAAGACCTGAAAACCCACCAATAAGCCGTGTATAAGAAAGAAAGAACAAGAGAAGTCTCTAAAACCTTAAAGAAACAAGGTTGTTTATGTAAAAACTTGTTGGGAACGAGAAAGGAAATATTCTCCAAGATATAAGGAAAAACACAAAGATGGCTAATAAGTAAATAAATGTTCAATAGTGACAAATAATAAAATAATTAAAATTACTCTCTTAACCTTTAAATTTATATTTATTTAGTTTCTTAATTTTTATTAGTGTTCAATAAGTCTACCAATATTTATTTCCTAATAAATTTTTAATTTACAATTTCCTGAATAATAAATTTTTTATATATTCAGTTTATCAATTTTAAAAAATATTGAAGAATCTATTAAAAATAAAATTAAAAGAAAGAAAGTAAATGTAGGGTCTCCGAGATGTTCTATTTATAGCGCCGACGCCTTCTTCTCTTTACCAACACACCCAAATCATTTCTTCTGATCATCACACATCTCTTCCTCTACCGTCAGACGCCGCTCTTGGCGTCAGACGCCGCCTAATCAGATGGCTGATGAAGTTGGCGATCGTAGTCGGAGTTTGGAGAATCTAAAGAGAACCCATAATAATAATCGAATATATGAATTTATATTGGAAGTTGCAAACTGTAATGAAAATGTTGAATTTAAATATTACTGAATAAAGTATCATAAAAAAAATTCAAACTCGAGAGGAAAAGTCAGAAGTAGTTTGCATACGAAGGAACAGTGATAGAAGAAGACGAGAGTAATGACGGCTGATCTGTGTTGTGATTGTGACATAAATTATTGGACCAATGGGATTTGGGTTCCCACCAAATACGAATTCTCTAATATCCCATTCGCCTCCGCTTCCCTTTTCTTTTTGCAAATTGCATTCTCTAGACTGGGTCCTCTTTGCTCCTATTTAATCTTTGACCCAACTGGAAATTACCATCACAACCGAGGAAATTCATTCCGGGATCGCTGTTCTTCAGCCGACGAGGTCTAAGGAGTTCGTGTCTGTTCTGGGTTTTGCTTAATTTCATCAATTTCGTTTGTTTTCGCCCCTCTTTCGGAATTCTGTAAGTTCTGGCTAATGGGATTTGGCTTTATCGTTGTTTCTATACTTTTGCCTGGTTGCTATGACCGGCGATTGATCCACTTCGCCGGAACTGTGCTGTATTGCTATTTGATTCACTAGTCTAGGTTTAGATGCTTCTTGTGTCAATATAACAGTTTTTGTGTAGTTCATTTGGAGTTTATAGGAATACCCACTTGTTCGAATAAATGGATTAGTGAGTAGCAACTTCTTCTGGCAAAGTCGTTGACATTTGATGAAAGAAACAGAAATTATTGTGATTTACATAATCTATGGCATATGAAATGAAATGATTGATCGTATACGGATTATATGAATCACAGAATGCGGCTAAAGATTAGGACAATGTGTGGGATGAAAAGAATGATTCTTGTCCTTCCATGTGTGATATAGCAAACTGTTGTTTATTGTTTGAGAATTTCATCATCATTCTTGAATATTGGATTTGGACGTTCCATTTTTCATTTGCCTTTTACATAAACATTTTGCAGGCTGCTTGCTGATCAGTTAACTTAA

mRNA sequence

ATGGGAGGCATCACATTGAAGGGTGAAGAAGAAGCACTCTACACAAGTGAAAGTCGGAGCAATAATAGGCCGTCTACCAAACGTGGATACAATGGTGACAAAAGAAGTTACAAAGGAACTTCACAACCCGAGAGAGCTCAGAAAAACGACAACAAGAGTTTCCAAGGAAAGAGATTTGAAGGTATTTGCTATAATTGCGGGAAAAAGGGCCACATGTCTAGAGATTGTTGGTCCAGTAAAAAGTCGGTTGAAAGCAATGTGGCAATATCCAAAAAGAAGATAGAGGATGAAAGGGATGTAGAGGTACTATGTCCAATAATAGAAGACGAGCTAGCACTCATGGCAATGATGGAAGAGCATATCGATTACGAGGATGACTGGATCATTGATTCAAAATGCTTAAACCACATGATTGACGATCAAAGCGGTGCAATGAAAGAGGGCCGACGAGGTCTAAGGAGTTCGTGTCTGTTCTGGGTTTTGCTTAATTTCATCAATTTCGTTTGTTTTCGCCCCTCTTTCGGAATTCTGCTGCTTGCTGATCAGTTAACTTAA

Coding sequence (CDS)

ATGGGAGGCATCACATTGAAGGGTGAAGAAGAAGCACTCTACACAAGTGAAAGTCGGAGCAATAATAGGCCGTCTACCAAACGTGGATACAATGGTGACAAAAGAAGTTACAAAGGAACTTCACAACCCGAGAGAGCTCAGAAAAACGACAACAAGAGTTTCCAAGGAAAGAGATTTGAAGGTATTTGCTATAATTGCGGGAAAAAGGGCCACATGTCTAGAGATTGTTGGTCCAGTAAAAAGTCGGTTGAAAGCAATGTGGCAATATCCAAAAAGAAGATAGAGGATGAAAGGGATGTAGAGGTACTATGTCCAATAATAGAAGACGAGCTAGCACTCATGGCAATGATGGAAGAGCATATCGATTACGAGGATGACTGGATCATTGATTCAAAATGCTTAAACCACATGATTGACGATCAAAGCGGTGCAATGAAAGAGGGCCGACGAGGTCTAAGGAGTTCGTGTCTGTTCTGGGTTTTGCTTAATTTCATCAATTTCGTTTGTTTTCGCCCCTCTTTCGGAATTCTGCTGCTTGCTGATCAGTTAACTTAA

Protein sequence

MGGITLKGEEEALYTSESRSNNRPSTKRGYNGDKRSYKGTSQPERAQKNDNKSFQGKRFEGICYNCGKKGHMSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMMEEHIDYEDDWIIDSKCLNHMIDDQSGAMKEGRRGLRSSCLFWVLLNFINFVCFRPSFGILLLADQLT
Homology
[Close]
BLAST of CmaCh04G028180 vs. ExPASy TrEMBL
Match: A0A6J1EU98 (uncharacterized protein LOC111435975 OS=Cucurbita moschata OX=3662 GN=LOC111435975 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.6e-68
Identity = 132/149 (88.59%), Postives = 141/149 (94.63%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRGYNGDK-RSYKGTSQPERAQKNDNKSFQGKRF 60
           MGG  LKGEEEALYTSESRSNNRPSTKRGYNGDK RS++GT+QPERA+KNDN+SFQGKRF
Sbjct: 76  MGGFILKGEEEALYTSESRSNNRPSTKRGYNGDKRRSHQGTAQPERAEKNDNQSFQGKRF 135

Query: 61  EGICYNCGKKGHMSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMMEE 120
           EGICYNC KKGHMSRDCWS KKSVESNVAISKKKIEDE D EVLCPI+EDELALMAMMEE
Sbjct: 136 EGICYNCRKKGHMSRDCWSRKKSVESNVAISKKKIEDEWDAEVLCPIVEDELALMAMMEE 195

Query: 121 HIDYEDDWIIDSKCLNHMIDDQSGAMKEG 149
           HIDYEDDWIID +CLNHMIDDQSGAM++G
Sbjct: 196 HIDYEDDWIIDFRCLNHMIDDQSGAMEDG 224

[Close]
BLAST of CmaCh04G028180 vs. ExPASy TrEMBL
Match: A0A6J1ESZ8 (probable inactive protein kinase DDB_G0270444 OS=Cucurbita moschata OX=3662 GN=LOC111437444 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.1e-30
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 72  MSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMMEEHIDYEDDWIIDS 131
           MSRDCW  KKSVESNVAISKKKIEDE D EVLCPI+ED+LALMAMMEEHI+YEDDWIID 
Sbjct: 1   MSRDCWFRKKSVESNVAISKKKIEDEWDAEVLCPIVEDKLALMAMMEEHINYEDDWIIDF 60

Query: 132 KCLNHMIDDQSGAMKEG 149
           +CLNHMIDDQSGAM+EG
Sbjct: 61  RCLNHMIDDQSGAMEEG 77

[Close]
BLAST of CmaCh04G028180 vs. ExPASy TrEMBL
Match: A0A6A3D2P3 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001120pilonHSYRG00173 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-26
Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRG--YNGDK-RSYKGTSQPERAQKNDNKSFQGK 60
           MGG++LKGEEEALYTS+SR   +  T  G   +GDK ++Y+G   P     + N+    +
Sbjct: 196 MGGVSLKGEEEALYTSKSRGTFQRYTGNGSKKDGDKVKNYQGKGGPHSGGASKNRG-NSR 255

Query: 61  RFEGICYNCGKKGHMSRDCWSSKKSVESNVA--ISKKKIEDERDVEVLCPIIEDELALMA 120
           +F+G CYNCGK GHM++DCW+ KK VESN A   SK+  ED  D E L    E+ELALM 
Sbjct: 256 KFDGKCYNCGKMGHMAKDCWTKKKPVESNTATSCSKENSEDGWDAEALFATEEEELALMV 315

Query: 121 MMEEHIDYEDDWIIDSKCLNHMIDDQ 142
              E IDY++DWI+DS C NHM  D+
Sbjct: 316 TTPERIDYKNDWIVDSGCSNHMTGDK 340

[Close]
BLAST of CmaCh04G028180 vs. ExPASy TrEMBL
Match: A0A6A3A2W4 (Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110602pilonHSYRG00268 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-26
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRG--YNGDK-RSYKGTSQPERAQKNDNKSFQGK 60
           MGG++LKGEEEALYTS+SR   +  T  G   +GDK ++Y+G   P   + + N+    +
Sbjct: 81  MGGVSLKGEEEALYTSKSRGTFQRYTGNGSKKDGDKVKNYQGKGGPHSGEASKNRG-NSR 140

Query: 61  RFEGICYNCGKKGHMSRDCWSSKKSVESNVA--ISKKKIEDERDVEVLCPIIEDELALMA 120
           +F+G CYNCGK GHM++DCW+ KK VESN A   SK+  ED  D E L    E+ELAL  
Sbjct: 141 KFDGKCYNCGKMGHMAKDCWTKKKPVESNTATSCSKENSEDSWDAEALFATEEEELALTV 200

Query: 121 MMEEHIDYEDDWIIDSKCLNHMIDDQ 142
              E IDY++DWI+DS C NHM  D+
Sbjct: 201 TSPERIDYKNDWIVDSGCSNHMTGDK 225

[Close]
BLAST of CmaCh04G028180 vs. ExPASy TrEMBL
Match: A0A6A3C681 (Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00010263pilonHSYRG00194 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-26
Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRG--YNGDK-RSYKGTSQPERAQKNDNKSFQGK 60
           MGG++LKGEEEALYTS+SR N +  T  G   +GDK ++Y+G   P     + N+    +
Sbjct: 481 MGGVSLKGEEEALYTSKSRGNFQRYTGNGSKKDGDKVKNYQGKGGPHSGGASKNRG-NSR 540

Query: 61  RFEGICYNCGKKGHMSRDCWSSKKSVESNVA--ISKKKIEDERDVEVLCPIIEDELALMA 120
           +F+G CYNCGK GHM++DCW+ KK VESN A   SK+  ED  D E L    E+ELAL  
Sbjct: 541 KFDGKCYNCGKMGHMAKDCWTKKKPVESNTATSCSKENSEDGWDAEALFATEEEELALTI 600

Query: 121 MMEEHIDYEDDWIIDSKCLNHMIDDQ 142
              E IDY++DWI+DS C NHM  D+
Sbjct: 601 TTPERIDYKNDWIVDSGCSNHMTGDK 625

[Close]
BLAST of CmaCh04G028180 vs. NCBI nr
Match: XP_022929390.1 (uncharacterized protein LOC111435975 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 7.4e-68
Identity = 132/149 (88.59%), Postives = 141/149 (94.63%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRGYNGDK-RSYKGTSQPERAQKNDNKSFQGKRF 60
           MGG  LKGEEEALYTSESRSNNRPSTKRGYNGDK RS++GT+QPERA+KNDN+SFQGKRF
Sbjct: 76  MGGFILKGEEEALYTSESRSNNRPSTKRGYNGDKRRSHQGTAQPERAEKNDNQSFQGKRF 135

Query: 61  EGICYNCGKKGHMSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMMEE 120
           EGICYNC KKGHMSRDCWS KKSVESNVAISKKKIEDE D EVLCPI+EDELALMAMMEE
Sbjct: 136 EGICYNCRKKGHMSRDCWSRKKSVESNVAISKKKIEDEWDAEVLCPIVEDELALMAMMEE 195

Query: 121 HIDYEDDWIIDSKCLNHMIDDQSGAMKEG 149
           HIDYEDDWIID +CLNHMIDDQSGAM++G
Sbjct: 196 HIDYEDDWIIDFRCLNHMIDDQSGAMEDG 224

[Close]
BLAST of CmaCh04G028180 vs. NCBI nr
Match: XP_023552935.1 (exopolygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.5 bits (441), Expect = 8.6e-40
Identity = 97/131 (74.05%), Postives = 105/131 (80.15%), Query Frame = 0 

Query: 2   GGITLKGEEEALYTSESRSNNRPSTKRGY-NGDK-RSYKGTSQPERAQKNDNKSFQGKRF 61
           GGIT KGEEEALYTSESRSNNRP TK GY N DK +S +  +QP R QK DN+S QGKRF
Sbjct: 436 GGITWKGEEEALYTSESRSNNRPFTKHGYKNCDKGKSRQIVAQPGRTQKYDNQSSQGKRF 495

Query: 62  EGICYNCGKKGHMSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMMEE 121
           EGI YNC KKGHMS+DCWS KKSVESNVA S  ++EDE D EVLC I E ELA MAMM E
Sbjct: 496 EGIFYNCRKKGHMSKDCWSKKKSVESNVAPSNMEMEDEWDAEVLCLIEEGELAFMAMMGE 555

Query: 122 HIDYEDDWIID 131
           +IDYEDDWIID
Sbjct: 556 YIDYEDDWIID 566

[Close]
BLAST of CmaCh04G028180 vs. NCBI nr
Match: XP_022931186.1 (probable inactive protein kinase DDB_G0270444 [Cucurbita moschata])

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 72  MSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMMEEHIDYEDDWIIDS 131
           MSRDCW  KKSVESNVAISKKKIEDE D EVLCPI+ED+LALMAMMEEHI+YEDDWIID 
Sbjct: 1   MSRDCWFRKKSVESNVAISKKKIEDEWDAEVLCPIVEDKLALMAMMEEHINYEDDWIIDF 60

Query: 132 KCLNHMIDDQSGAMKEG 149
           +CLNHMIDDQSGAM+EG
Sbjct: 61  RCLNHMIDDQSGAMEEG 77

[Close]
BLAST of CmaCh04G028180 vs. NCBI nr
Match: DAD23742.1 (TPA_asm: hypothetical protein HUJ06_025205 [Nelumbo nucifera])

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-27
Identity = 78/144 (54.17%), Postives = 97/144 (67.36%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRG--YNGDK-RSYKGTSQPERAQKNDNKSFQGK 60
           MGGI+LKGEEEALY ++SR N++  T  G   N DK R+++G         + N    G+
Sbjct: 76  MGGISLKGEEEALYVNKSRRNSKQHTFGGSKKNDDKARNHQGEGSACTGGASKNHG-NGR 135

Query: 61  RFEGICYNCGKKGHMSRDCWSSKKSVESNVAISKKKIEDERDVEVLCPIIEDELALMAMM 120
           +FEG CYNCGKKG+M++ CWS KK VESNVA SK   E+E D E L    E+ELAL+A +
Sbjct: 136 KFEGKCYNCGKKGYMAKACWSKKKPVESNVATSKS--EEEWDAEALFAAEEEELALIATI 195

Query: 121 EEHIDYEDDWIIDSKCLNHMIDDQ 142
            EHIDYE DWIIDS C NHM  D+
Sbjct: 196 SEHIDYEKDWIIDSGCSNHMTGDK 216

[Close]
BLAST of CmaCh04G028180 vs. NCBI nr
Match: KAE8698166.1 (tir-nbs resistance protein [Hibiscus syriacus])

HSP 1 Score: 129.0 bits (323), Expect = 4.1e-26
Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 1   MGGITLKGEEEALYTSESRSNNRPSTKRG--YNGDK-RSYKGTSQPERAQKNDNKSFQGK 60
           MGG++LKGEEEALYTS+SR   +  T  G   +GDK ++Y+G   P   + + N+    +
Sbjct: 81  MGGVSLKGEEEALYTSKSRGTFQRYTGNGSKKDGDKVKNYQGKGGPHSGEASKNRG-NSR 140

Query: 61  RFEGICYNCGKKGHMSRDCWSSKKSVESNVA--ISKKKIEDERDVEVLCPIIEDELALMA 120
           +F+G CYNCGK GHM++DCW+ KK VESN A   SK+  ED  D E L    E+ELAL  
Sbjct: 141 KFDGKCYNCGKMGHMAKDCWTKKKPVESNTATSCSKENSEDSWDAEALFATEEEELALTV 200

Query: 121 MMEEHIDYEDDWIIDSKCLNHMIDDQ 142
              E IDY++DWI+DS C NHM  D+
Sbjct: 201 TSPERIDYKNDWIVDSGCSNHMTGDK 225

The following BLAST results are available for this feature:
BLAST of CmaCh04G028180 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G028180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EU983.6e-6888.59uncharacterized protein LOC111435975 OS=Cucurbita moschata OX=3662 GN=LOC1114359... [more]
A0A6J1ESZ85.1e-3087.01probable inactive protein kinase DDB_G0270444 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6A3D2P32.0e-2650.00Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001120pilon... [more]
A0A6A3A2W42.0e-2649.32Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110602pi... [more]
A0A6A3C6812.6e-2650.00Tir-nbs resistance protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00010263pi... [more]
BLAST of CmaCh04G028180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022929390.17.4e-6888.59uncharacterized protein LOC111435975 [Cucurbita moschata][more]
XP_023552935.18.6e-4074.05exopolygalacturonase-like [Cucurbita pepo subsp. pepo][more]
XP_022931186.11.0e-2987.01probable inactive protein kinase DDB_G0270444 [Cucurbita moschata][more]
DAD23742.11.7e-2754.17TPA_asm: hypothetical protein HUJ06_025205 [Nelumbo nucifera][more]
KAE8698166.14.1e-2649.32tir-nbs resistance protein [Hibiscus syriacus][more]
BLAST of CmaCh04G028180 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 62..78
e-value: 1.2E-5
score: 34.7
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 62..76
e-value: 1.4E-6
score: 28.1
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 63..76
score: 11.152654
NoneNo IPR availableGENE3D4.10.60.10coord: 16..94
e-value: 5.3E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 1..140
NoneNo IPR availablePANTHERPTHR34222:SF8SUBFAMILY NOT NAMEDcoord: 1..140
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 55..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G028180.1CmaCh04G028180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding