CmaCh04G028140 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G028140
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr04: 18830658 .. 18831256 (+)
RNA-Seq ExpressionCmaCh04G028140
SyntenyCmaCh04G028140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCCTGGGAAGAGAAATGGTCAATGTGACCAAATAAGTATATTTGATGATACAGATCAAGTTCATGATTGGCAATGTTTATCAGATGCCAAAAAGTAATACAATTCATCATCACACAGTATACCGCCTAGATTTAGTCATTTTGATATTTCTATGCTGATGGGAGAATAATGAAAGAAGAATACTGACTGATAAGTTATTGGCAGACTGCATTCAATTCTTCTTCTTCTGTCCTCTGTGTTTCCTCTATTTCATTTCTTTCCATGACTGGTTTCGCCTTCTTCGTATTCACAATGGCCATCGAGTAGAAACTCCCTGCATGAAAATAGCAAGTTGAAGAGAAATGTGCTTAAATGCAAGTATAAACGAGGATATGCATGAAAGAGTAATACTTAATTCGTCCACAAAGGCGTGCTAAAGCATCCGATCCCGTTCTGGATGCAACATCTTCTATTTCGGAAGCATTCTGCAAGTTAACAGTATCAGCAAGCCTGAACTCACACAGCTCCTTCAAGGAACAAGCGTCTGTTAAGACAGCTGAATGTCCACCACCAGCTGCTAGTTTTCGCACTTCTCCCACACACCTGGAAATTTAA

mRNA sequence

ATGAACCCTGGGAAGAGAAATGGTCAATGTGACCAAATAAGTATATTTGATGATACAGATCAAGTTCATGATTGGCAATGTTTATCAGATGCCAAAAAGCGTGCTAAAGCATCCGATCCCGTTCTGGATGCAACATCTTCTATTTCGGAAGCATTCTGCAAGTTAACAGTATCAGCAAGCCTGAACTCACACAGCTCCTTCAAGGAACAAGCGTCTGTTAAGACAGCTGAATGTCCACCACCAGCTGCTAGTTTTCGCACTTCTCCCACACACCTGGAAATTTAA

Coding sequence (CDS)

ATGAACCCTGGGAAGAGAAATGGTCAATGTGACCAAATAAGTATATTTGATGATACAGATCAAGTTCATGATTGGCAATGTTTATCAGATGCCAAAAAGCGTGCTAAAGCATCCGATCCCGTTCTGGATGCAACATCTTCTATTTCGGAAGCATTCTGCAAGTTAACAGTATCAGCAAGCCTGAACTCACACAGCTCCTTCAAGGAACAAGCGTCTGTTAAGACAGCTGAATGTCCACCACCAGCTGCTAGTTTTCGCACTTCTCCCACACACCTGGAAATTTAA

Protein sequence

MNPGKRNGQCDQISIFDDTDQVHDWQCLSDAKKRAKASDPVLDATSSISEAFCKLTVSASLNSHSSFKEQASVKTAECPPPAASFRTSPTHLEI
Homology
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BLAST of CmaCh04G028140 vs. ExPASy TrEMBL
Match: A0A7C9E5L7 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.4e-05
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 27  CLSDAKKRAKASDPVLDATSSISEAFCKLTVSASLNSHSSFKEQASVKTAE 78
           CLS  ++R K S+ V +ATSSI  AF ++T+SASLNSH SFKE ASV TAE
Sbjct: 67  CLSFPQRRTKPSELVRNATSSIWAAFSRVTLSASLNSHKSFKEHASVSTAE 117

The following BLAST results are available for this feature:
BLAST of CmaCh04G028140 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G028140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7C9E5L76.4e-0562.75Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
BLAST of CmaCh04G028140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmaCh04G028140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G028140.1CmaCh04G028140.1mRNA