CmaCh04G026410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G026410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CASP-like protein
Location	Cma_Chr04: 18001845 .. 18002686 (+)
RNA-Seq Expression	CmaCh04G026410
Synteny	CmaCh04G026410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTTATCCTGAGAATCCTGACCTTCATTTTGATCTTCATTTCTCTCCTAATCAACGCCACAAATTCCAAAACTTTGAACAAAGGCGCTGAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCCTATCGGTAAGTGTGTTCTTAAATATGGTTTTTCTTTTAGAATTCTCAGCAACTTTTGATTCAATGTGGTTCTGTTTATGTACAGATATTTGATATCAACCACTATTATTGGAGCTGTTTTGAGTCTACTTCAAATTGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGCGACAAGGTAAGTATAATGATATTTGTTTAAGCTTTCGAGATTTAAGGATGTTTGATGTCATGTTGTGTCATGTTATGTAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTAGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTGGACAAGGGAAATGCTTCGGCAGCCGTTCTTCTCCTCGCTTTCATTTGTGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATAGTGTTGGTCTTCCATATTTGCTTTGTATTGATAATATAGTTTTTAATATTTGTTTAACAAAAAATAGGAACAATCTCATATTATAAATTATGAATTATTTTTCCTTTTTTTAAGAGTGCGATTTTACATTTTCGTTTGCTTATTGGGCTTTTTCTACATAACCCAATAAC

mRNA sequence

TAGAAGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTTATCCTGAGAATCCTGACCTTCATTTTGATCTTCATTTCTCTCCTAATCAACGCCACAAATTCCAAAACTTTGAACAAAGGCGCTGAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCCTATCGATATTTGATATCAACCACTATTATTGGAGCTGTTTTGAGTCTACTTCAAATTGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGCGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTAGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTGGACAAGGGAAATGCTTCGGCAGCCGTTCTTCTCCTCGCTTTCATTTGTGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATAGTGTTGGTCTTCCATATTTGCTTTGTATTGATAATATAGTTTTTAATATTTGTTTAACAAAAAATAGGAACAATCTCATATTATAAATTATGAATTATTTTTCCTTTTTTTAAGAGTGCGATTTTACATTTTCGTTTGCTTATTGGGCTTTTTCTACATAACCCAATAAC

Coding sequence (CDS)

ATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTTATCCTGAGAATCCTGACCTTCATTTTGATCTTCATTTCTCTCCTAATCAACGCCACAAATTCCAAAACTTTGAACAAAGGCGCTGAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCCTATCGATATTTGATATCAACCACTATTATTGGAGCTGTTTTGAGTCTACTTCAAATTGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGCGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTAGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTGGACAAGGGAAATGCTTCGGCAGCCGTTCTTCTCCTCGCTTTCATTTGTGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGA

Protein sequence

MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP

Homology

[Close]

BLAST of CmaCh04G026410 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           S GSR   L+LR+LTF+ + I+L++ A   +T     E   + KF D+Y+YRY+IST II
Sbjct: 14  STGSRTVLLLLRVLTFVFLLIALILIAIVKQT---DDETGVEIKFNDIYAYRYMISTIII 73

Query: 64  GAVLSLLQIALNIYNVVTKSHRTL------LFDMFSDKLLSYLLLSGASAGLGAGIDLRV 123
           G   +LLQ+AL+I+ VV+  +R L      LFD F DK++SYLL+SG++AG G  ++L  
Sbjct: 74  GFAYNLLQMALSIFTVVS-GNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGR 133

Query: 124 GLKELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
           G+        NSF+DK NASA++LL+AF+  AV S  +S AL +K
Sbjct: 134 GVPS------NSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmaCh04G026410 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 0


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           S  SR+A+LILRILTFI +  SL+I  TN+ TL      E K  FKDVY+YRY+++T +I
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLV-EVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAVLSLLQIALNIYNVVTKSHR-----TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVG 123
           G   ++LQIA  +Y V T +        L FD F DK++SY+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 LKELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLAL 160
                    ++F++KG ASA++LL+ F+C AV+S+ SS AL
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CmaCh04G026410 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-22
Identity = 66/162 (40.74%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 7   SRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAV 66
           SR+ +L LR+LTF  + +SL+I  TN+ T+  G + E K + KD YSYRY+++    G  
Sbjct: 19  SRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAIAFGLT 78

Query: 67  LSLLQIALNIYNV------VTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 126
            ++LQIAL + ++       T     L+FD + DK++SY+L +GA+A  GA  +L+  L 
Sbjct: 79  YTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLA 138

Query: 127 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
            L G   + F +KG ASA++LLL F+C A++S+ SS AL +K
Sbjct: 139 GLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CmaCh04G026410 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 63/161 (39.13%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           ++  L+LR+LT + + I+L+I +TNS T+     +  KF FKDVY+YRY++S  +IG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTI-VSQGSALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ F  KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmaCh04G026410 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 61/161 (37.89%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           +++ L+LR+LT + + I+L+I +TNS T+     +  KF FKDVY+YRY++S  +IG + 
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTI-VSQGSALKFHFKDVYAYRYMLSAAVIGLLY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIALVAL 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ F  +G ASA++LL +FIC AV+S+ SSLA+ ++
Sbjct: 134 DSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of CmaCh04G026410 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
           TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           MEGSKGSRIASLILRILTFILIFISL+INATNSKT NKGAENET FKFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
           T+IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           ELVGNLLNSF DKGNASAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.7e-56
Identity = 127/163 (77.91%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           M  SKGSRIASLILRILTF+LIFISLLI ATNSKT+ KG E E K +FKDVYSYRYL + 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           +LVGN+ NSF DKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of CmaCh04G026410 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.8e-53
Identity = 120/163 (73.62%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           M  SKGSRIASLILRILTFILIFISL+INATNSKTLNKG ENE K +FK+VYSYRYLI+ 
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            +IG VLSL+QI L+IY++VTKS  T LF +FSD LLSYLLLS +SA LGAGID+R  LK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           EL G L +SF D+G+ +AAVL +AF+CAAVVSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.1e-52
Identity = 119/163 (73.01%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           M  SKGSRIA+LILRILT ILIFISL+INA+NSKTLNKG ENE K +FK+VYSYRYLI+ 
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            +IG VLSL+QI L+IY++VTKS  T LF +FSD LLSYLLLS +SA LGAGID R  LK
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           EL G L +SF D+G+ +AAVLL+AFICAAVVSILS+LALIRKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 2.5e-75
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
           TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           MEGSKGSRIASLILRILTFILIFISL+INATNSKT NKGAENET FKFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
           T+IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           ELVGNLLNSF DKGNASAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 4.0e-73
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           MEGSKGSRIASLILRILTFILIFISL+INATNSKT NKGA+NETKFKFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLIST 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            IIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK
Sbjct: 61  MIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           ELVGNLLNSF DKGNASAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: KAG6602372.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.3 bits (713), Expect = 2.2e-71
Identity = 155/163 (95.09%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           MEGSKGSRIASLILRILTFILIFISL+INATNSKT NKG +NET FKFKDVYSYRYLIST
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGDQNETTFKFKDVYSYRYLIST 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
           TIIGAVLSLLQIALNIYNVVTKSHRTLLF+MFSDKLLSYLLLSGASAGLGAGIDLRVGLK
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFNMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           ELVGNLLNSF DKGN SAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 121 ELVGNLLNSFFDKGNGSAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: KAG7033050.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 150/158 (94.94%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 6   GSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGA 65
           GSRIASLILRILTFILIFISL+INATNSKT NKG +NET FKFKDVYSYRYLISTT+IGA
Sbjct: 151 GSRIASLILRILTFILIFISLIINATNSKTFNKGDQNETTFKFKDVYSYRYLISTTVIGA 210

Query: 66  VLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGN 125
           VLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGN
Sbjct: 211 VLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGN 270

Query: 126 LLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
           LLNSF DKGN SAAVLLLAFICAAVVSILSSLALIRKP
Sbjct: 271 LLNSFFDKGNGSAAVLLLAFICAAVVSILSSLALIRKP 308

[Close]

BLAST of CmaCh04G026410 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 97.8 bits (242), Expect = 8.4e-21
Identity = 63/161 (39.13%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           ++  L+LR+LT + + I+L+I +TNS T+     +  KF FKDVY+YRY++S  +IG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTI-VSQGSALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ F  KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmaCh04G026410 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20
Identity = 64/162 (39.51%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           R   L+LR+LT   + I++++ +TN+ TL + +    K  F DVY+YRY++S  +IG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTL-EISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT-KSH-RTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV-- 127
           +++Q+ L I    T K+H  T  FD + DK++SYLL +G++AG G   DL+     L+  
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 --GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
              + ++ F  KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

The following BLAST results are available for this feature:

BLAST of CmaCh04G026410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6T1Z6	1.4e-25	45.45	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9SXY8	2.7e-24	44.10	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	4.3e-22	40.74	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
Q56X75	1.2e-19	39.13	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD59	1.2e-19	37.89	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of CmaCh04G026410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJD2	1.2e-75	100.00	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	1.1e-73	96.93	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]
A0A6J1C1A4	3.7e-56	77.91	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1HET3	3.8e-53	73.62	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	7.1e-52	73.01	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of CmaCh04G026410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990642.1	2.5e-75	100.00	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022954145.1	2.3e-73	96.93	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_023525049.1	4.0e-73	96.93	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
KAG6602372.1	2.2e-71	95.09	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033050.1	1.0e-68	94.94	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh04G026410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	8.4e-21	39.13	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	2.4e-20	39.51	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 2.5E-23 score: 82.5
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 6..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 6..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G026410.1	CmaCh04G026410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding