CmaCh04G025990 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G025990
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr04: 17780433 .. 17783713 (-)
RNA-Seq ExpressionCmaCh04G025990
SyntenyCmaCh04G025990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACGTCGCCGGAACCGCTCCGATTTGACGCTCAATCCGCTTCTGGAATCTTCATCTCCGCCCCAGCCTAATCCTCTTGGACTTGCTGACTTCAATTTTCTTCCTGCAGATAGCGACGATTGCGCCTTAGTCGGAGTCGCCGGCGATTGGCGACTTGGTGCACGGCTCGTATTATGGCTCGTCGGAGTCCTTGGAAAAGGCTTGATGTCAAGATTGAAATCACGACGGGCGTAAGATTTTGCAATGTCTCCAATTGACGTTGCATGGCTGATCGCGCTCTTGACAGAGCCACGATCGTGGTAATCGACGGCGCTTTTGGTCTCCCATGGACGAGCAGCCATCCATCGCTCTAACCAACTCCATCCCCAGTGGGGATTGTTGGGGTCCATGAACGTAGGATTTGCAGATTTTGAAGAATTATTCCAGAACTTCTGTTGAGGAAAACGACCAGGAGAATGAAAATCAGTGATCAGAGCATGAAGATGATAATCAAATCAGGAAGAAACGGAAATGAATTGAACCTGATGAGAGTAAGCATAAGCCAACGCCCTTTCTCTTCTTGTTGCTGCTTCTTGCCTGTTAACTAATCTGGCTTCAACTTGCTCCTTTGATTTGGTACTATCATCCCATTCATTGTTTGCCTAATTGAAACATCAAAACTTAAATTCTTCTTCATAGTATGAACACAAGGATTAGGAACACATGCAAACACTAATACATACATATATGCCCCTTACTTTATGGTTTTATACTATACAAGCCACATTCATGGTTTTAAATTATACTCAAAACTCGTTCTGAATATCACAAGATTGATTGAAATGCTCTGAAGTCAACTAGAACACTTAATGGATTCAAAACTCCCATTACAAAGGGGCACTAGAAAAAGGAACATGGCCTACTTGCTACCCACTTGGAATAGTAACTATCCTAAGAGTTTCCTAATATTAAATATTGTAGGGTCAGCTGAATTGTGTGAATCACTTTACTACATTGGATAAGGTCAAACTTGTGAAATCTCACATCGATTGGAGAGGAGAACGAAACATTTCTTATAAGGGTGTGGAAATCACTCCCTAACAAACACGTTTTAAAACCGTGAGACTGACGGCGATGCATAACGGGCCAAAGCGGACATTATCTGCTAGCGGTGAACTTTGACTATTACAAATGGTAGCAAAGCAAGATACCGAGCATTGTGCCAGCGAGGAGGCTGAGCCCCCAAGAGAGTGGATTGTGAGATTTCACATCAATTGGAGAGGAGAATGAAATATTTTTTATAAGGGTGTGGAAACCTCTGCCTAACAAATGCGTTTTTGTATGAAAATCTCTCCCGAAAAGACACGTTTTAAAACCGTGAGGCAAACAGCGATACGTAATGGGTCAAAGCTAACAATATCTAGTAGCGGTGGACTTGGACTTTTACAAAAGTCTTATAAAAACTGCCCTAAACACTTGGATTATGTAAAAGAAACCAAAATGCGAGGAATTTGCAGAAGAGAACGGTTAAAACTTACAGAAACAGTTAACCTCTCAAGCTCTCTTTCATGTTTTTGTTGGAGCTGCCTCTGAAGAGCCTGATTCTCCTCTGACAATCTAATTCTTCTAGCACGAATCTGTGACTGCACTCGAGCAAGAGTCTGCATGCATCTTAATGTGGATGTTGCTTGCCTTTTAACAGATTGGCCTTGTATCAATGACTTCAGCCTCACCAACCCTCTTAATGCTCGCAGGGCCCTCCTAGCCTAAGCCATACAAAATCCCCATTACAAAACCAATCTCTTCAATACCATATTTAATGCCCCAAATTCCTAAAGGGGCCAGTACAGAGAAAGCAGGTCAGGTCAGTTCATCACTTTAAATGACTCTTTTTTAACACTCTGTAGACCATTAAATGACACATTCAAAGCCTGCATTGAAGTTAGGTTTATGTGATTCATAGCAAAAAGTACTCAATTCATAGCAAAAAGGTAGTTTGATTTGTGCATTCTGTTGTTATTGATGTTTTGTTATAAGAATCTTGAATTGTATGATTTGTACTTGTCTTAAACAAATATGCTCTCAAGTTAATGGCTACTTCAATCAAATTCTATCCAAAAGAACAGTTTAAAAAGTAGTGAATAGTTCCTAAACAGCTATATCTTACAAACAGTGCCAACAATTCTTGCAGAAAAAAAGTGAAAGAGATTGCTTACCATATAGCCACGGAATGCAGTCTGGATCTTGATGGCTGCTATTTCTTCCTTAGATTTCCCGGAGTACCAAGGGCGGGTGGTGAGCCTAACGACCTCTGCGGCGGCCTGAGCCGCTGCAACCGCCACCTCCGCAGCGACTGCAGTGGCAATGGCAACAGAGTAAGCATGTTTGCTCTGTTCATTCTCTGCATTAGCTAGTTTCACTTCCTCGATAGGTAGAATAGACACTTCCAATGGCGCTGGCTCCCCAGATGCCACCGTCTCCAATTTCTTTGGCTTCCCAAACCATCTTTTCTTTGATTTGTTAGCTTTCTAGTAACGAAAATCATTAGCAAACTCTCAGTCCAGAATCTTAGAAGAACACTTCGGAAAACAAAAATCTATAGAAATTAGAACCTGATCTTTCTTATCCTTTGATTCTGGAGCAAATGCTTTCTTCACAGCAGAAAACCAGCCTCCCTTCTTCCCCATTTCCTATTCAATCATCTGAATATCAACAAATAAATGAATAAAATAGTTCATTAAGAATTCACTAAGAACACAAAAAACCGGAAGAATCCAACAGATCTAAACTGAAGAGAGCGGAAAACATCCAATTGAAGATCACCTAACTCCAACATTCCAAAGATAAACTAATTCATTTGGAAAAGGAGATTTAAAGGCAAAATCCAGAAAGATTCAAAGAAGATGAAGAAGAAGTTCATAAATGGACAAGTAGAAGCAATCCGCCATTAAAATACCTCAGCACAAAATCTCCATTTCTCCTCTGAATCTCAGGAGCTTTCTCTCTCTTAGATCCTAAAAAAACTGAGAGGCAACGAACACAGCAACCTCCATTAGAGAGAGAAGGGCCAGATCTCGAGGTTAGAGAGAGAAAGAAGAGAGAGAGAGAGGGAGGAGTGTAGGGCGTTGGGAAAAGAAAAGTAGTAGTAGTAGTAGTAGACCGAGTGGGTTATGTGTGATTCTTATTATTATTTTAACAGCATAGCGGCAAGGCAAACAGAGCAACAAAACAAAACCCAAGTTGCTGTCACCGTGGCCATCGCTGTCGCCGCCGTCTTCTCCGCCGTCGTCGTCCGGTAA

mRNA sequence

ATGCTACGTCGCCGGAACCGCTCCGATTTGACGCTCAATCCGCTTCTGGAATCTTCATCTCCGCCCCAGCCTAATCCTCTTGGACTTGCTGACTTCAATTTTCTTCCTGCAGATAGCGACGATTGCGCCTTAGTCGGAGTCGCCGGCGATTGGCGACTTGGTGCACGGCTCGTATTATGGCTCGTCGGAGTCCTTGGAAAAGGCTTGATGTCAAGATTGAAATCACGACGGGCAATTATTCCAGAACTTCTGTTGAGGAAAACGACCAGGAGAATGAAAATCAGTGATCAGAGCATGAAGATGATAATCAAATCAGGAAGAAACGGAAATGAATTGAACCTGATGAGACTATATCTTACAAACAGTGCCAACAATTCTTGCAGAAAAAAAGTGAAAGAGATTGCTTACCATATAGCCACGGAATGCAGTCTGGATCTTGATGGCTGCTATTTCTTCCTTAGATTTCCCGGAGTACCAAGGGCGGGTGGTGAGCCTAACGACCTCTGCGGCGGCCTGAGCCGCTGCAACCGCCACCTCCGCAGCGACTGCAGTGGCAATGGCAACAGAGTAAGCATCATAGCGGCAAGGCAAACAGAGCAACAAAACAAAACCCAAGTTGCTGTCACCGTGGCCATCGCTGTCGCCGCCGTCTTCTCCGCCGTCGTCGTCCGGTAA

Coding sequence (CDS)

ATGCTACGTCGCCGGAACCGCTCCGATTTGACGCTCAATCCGCTTCTGGAATCTTCATCTCCGCCCCAGCCTAATCCTCTTGGACTTGCTGACTTCAATTTTCTTCCTGCAGATAGCGACGATTGCGCCTTAGTCGGAGTCGCCGGCGATTGGCGACTTGGTGCACGGCTCGTATTATGGCTCGTCGGAGTCCTTGGAAAAGGCTTGATGTCAAGATTGAAATCACGACGGGCAATTATTCCAGAACTTCTGTTGAGGAAAACGACCAGGAGAATGAAAATCAGTGATCAGAGCATGAAGATGATAATCAAATCAGGAAGAAACGGAAATGAATTGAACCTGATGAGACTATATCTTACAAACAGTGCCAACAATTCTTGCAGAAAAAAAGTGAAAGAGATTGCTTACCATATAGCCACGGAATGCAGTCTGGATCTTGATGGCTGCTATTTCTTCCTTAGATTTCCCGGAGTACCAAGGGCGGGTGGTGAGCCTAACGACCTCTGCGGCGGCCTGAGCCGCTGCAACCGCCACCTCCGCAGCGACTGCAGTGGCAATGGCAACAGAGTAAGCATCATAGCGGCAAGGCAAACAGAGCAACAAAACAAAACCCAAGTTGCTGTCACCGTGGCCATCGCTGTCGCCGCCGTCTTCTCCGCCGTCGTCGTCCGGTAA

Protein sequence

MLRRRNRSDLTLNPLLESSSPPQPNPLGLADFNFLPADSDDCALVGVAGDWRLGARLVLWLVGVLGKGLMSRLKSRRAIIPELLLRKTTRRMKISDQSMKMIIKSGRNGNELNLMRLYLTNSANNSCRKKVKEIAYHIATECSLDLDGCYFFLRFPGVPRAGGEPNDLCGGLSRCNRHLRSDCSGNGNRVSIIAARQTEQQNKTQVAVTVAIAVAAVFSAVVVR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G025990.1CmaCh04G025990.1mRNA