![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmaCh04G025160 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACTTATCATTCAAGCTCTGCTGCTTCTCTGCAGTTGGCTGCTCTGTAATTTATAAACATTTCTAAGTTCTAATTATTACTGCTATTTATCTGTCTGCCATTTCGGTAATTTTTTTTTCGTAAAATTTGTCGCTGATTTTTTACCGAAATAATTTGAAAAAGTTAAATCGTAAATTTGGTTCTAATAAGGTTAGAATTGAGTATGAATTAGTCTTTTTGGATTGCAAAACCTCGTAAAGATCGATCTTCAATTTTCATACTGTCTCGTTCATTGAGATCGAGTTTTCTATGTTTATAGTCTTTTCAAGCTGTCTTAGCCATGACTCGAACACAAGACTTAAAGGTGTCTTTTGACTTCCTTTTCATTTTTTTTTTTTTGGTATTATATTTAATTTTTATTTTAAAAATTATTATTATTATGATTAAAGTTTTATAATAGGTTTTTAAAAACATTTATTAGTTTTGTTTTACCCATTAAGAAAAAAACATTATTTTAAAGATTTAATCAACAAATCTCATAAAAAAGTTAAATCTATTTGATTTGGTAGATATTAATAGAATTAAAAAAAGTTTATGATTGAAATTAAAAAAAAAAATGTTTTAAATAATTCTTTTAAGTAATCTATTTTTTAAGTATATAATAAAATAATTATTTGAATTAAATATTAAATTCTATTGTATTTAATGAATGAGGATGTAAATGTAATTTTGTATCTGAGAACTTCAAAAGTTTTTTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTTTTTTTTTTTTTTTTTTTTTTTACATAAATATTTAGAGGCTGATTTTTATAATAGCTTGGAATTTAAATTTAAGAGGATTTTAAAATTTAGAAATTTAATTTAAATTAAATTCAAAAAAGATAAAAATTAATTTTTTTCAAACATAAAAATTATAATAAATACTTTGGGATAAAAAAATTTTAATTTTGGTTTGAAGCCTAAAGTATAAGTTCACAGAAACTTGTTCCTAATCGGAGACGGAAGGGTAAACTGATTGAGGTTCGGCTTCCCTATAAATTACGATTACCCCACCAATTCCCACTTTTATGTATTCTTCAAGCTGATCTCTCTTCTACCTTGCATCTTACGTGAAGTAGACCAGCGATTTCCAGTTTTAAGGTTAGCAATTTCCCTTCTATCCTGTGATTTGTACTCTCTGATTGGATCGTGGAATTGAATTTTGTTTTCTTCGTCGATTTCTCTCTTTTTTCTGGGTAATTTGGATAGAATCTGTGTAGGGTTTGGTTTCGTTTGCCAACTGTTTCGTGCGATATTGGTTGCTGAGCGAAAATCATTGCATGAGGTGTTGGAAAATGTTGCGAATTTGTATTTGTTTAATATTCTGCTCCTTTTTTTCCCTGTTGAAGAGGGAAAGCCTTCGTTCGCAAGCATAAAATCTGTTCGTACTATTAGGTTGGCTTAATTTTTCCCCTTCGTGATTCGGACTTTACTTCTCTACCCGTTTGGGCAAGGTTTATTAATTGTCTGAAGGAATATTGGGATTTTTTTGCCTGCGGTATGATGTGTTTGATGCAATTGAGTACTTGATACTGTCATTTGCATAGATTACGACCTTGCTGCTATGGATAATTAAAGATATTAGTTCTTGGTTCTTCGATTGATCAATCCTGCAAGCAAGGAATTTACGGAGAATCCGCTGCCTTTGTTAGTTTTGGCTCAATTTGTACAGATCGCTAATATGGAAACTTCCCAAACAATAGGGATTTTCCTAGCTGGAAAACCTTTAACTATGACCTAGGAATTTAAATAATCACAGAAAGAAAAGTCCCAACAGGCAACAGTGACAGTTAACTGAGCTCAATTACAAATTGAACGGGGATAGAATAACAGGAAGGGTAACCTCATATCGTGTTTTAATTAGTATTTGTGAATTTTCGCATGTTTCCTTCTTACATGTCGAGAATGAATTTGAATTAACTATATCCATTTAAAATTTTTGTAGGCTACTGCTGCAGTTTGTGAGTGCTACTGCTTTGATTCTTCTCAGACAACCGTTGGAGATGAGTCAGAAAGGCCTAATATACAGCTTTGTTGCTAAAGGAACTGTTGTTTTAGCAGAACACACATCATTCTCAGGGAATTTTAGTACCATTGCTGTTCAATGCTTACAGAGATTGCCTTCTAACGGCAGCAAATGCACATACTCATGTGATGGATATACATTCAACTTTCTTCTTGACAGTGGATTTGGTATTGTGTTTTCTCAAGTTTGATAATATACTTGTTTAGATTTCACCAACATTTGTGGCTGAAGGTGTTTGATTGATTTGCAGTCTTTCTCGCTGTTGCGGATGAATCAGTTGGAAGGAATATGCCATTTGTATTTCTGGAGCGTGTGAAAGATGACTTTAAACAGCGTTATGGATCAAGTATCAAGGAAGAGGACCCTCACCCACTTGCAGATGATGAGGACGATGATGATCTATTTCTTGACCGATTCAGTGTTGCATACACTCTTGACAGAGAATTCGGGTATGCCCATCATGAACAATATCTTAGTTATATGTCATATGTTTTACCTTACAACCTATAATTTTCATGGCAGGCCAAGGCTTAAGGAGCACATGCAATATTGCATGAATCATCCAGAAGAAATGAGTAAACTTTCCAAGCTGAAGGCTCAAATAACAGAGGTGAAAGGAGTTATGATGGATAACATTGAAAAGGTTAGACTTCTTGTTTTATGAAATCTTGCAATATCTGCTCAAGATTTTCTGTTTAGATTTTGAAAGAGTATATATGCTCCTTTTTTTCACTGTTGTGCATAATGTATAAACACAGAGACGTAGATTAAAAGAACATTTTAGAAATTTTACTCTGCTTCCTTTAATCCTTTCTCCTGCTCATTGCGCCTGTTACATGCAGCATCCTGTTAGGCAGATCAGTCAAGTAGTATATTAGCCATTAGATTTTCTGTAATTATGTTGCTATGAAATTGATAAAAAAAAAAAAAAAAAAAACAATTACACAGTGTTGCTTGATTTTCAGCTGCACCAGTTGAATAACAATTGTTTGCAAGGAACTTGGTAGTGATCAGTTTTGGAAAATGTGAAATGGAATTGGTCAAATATCACATACACACTTTCTTTTTCCCACTTTTTCTTCCCTTCCTTGCTTCTCAATACAGCCATTGGAAATGATTGTGGTGATTTTGATCATTAAAGTATCTCTTTGGTCTTTTGTCTTGGAAACAATAATGTGTCAATTTGATAGGATTTTACATTATGTTGTTATTGATTTTCTTATTTAGCTTGCATGTTTCTGAATACATACAAAACATCAACTGTGTGATATCCTATGTACTGTTTAATTTACATGTATGTATTAGAAGCCACAAGTCAAATCTTAACCTTGGCGAGAAATTTGGTGGCATATCCTTGAGCGGGTAATGAAAGGAATGGACTATCTATCCACTTTTGACAACAAAAGTGATCATTTGATAACTGACATGGGGATTGGGGAAAAAATGCTTGCTTCTCTATACGATGTTCTCTGTGGATATTAAGTTGAAAATGAAAGCTTATACTTTGTGGTGCTACTTGTACGAAGCTAAGTTATGCTAAACGTTTTTAAGATGAGACTCCGTATTTGGATGAGACTGTTGACAATTTAGTATTATTATTATTAATTCTTTACCGAGTTCTCTCGGTCTCTTGATAACAGGTTCTATAACTACCCTCTTACTGTGAGATAGGGTTTTCCAAGTCCTTTTTAATCTTGGGTTGGGTAGTGCCCCTATGAGATCCCACGTCTTCTTTATAAGGGTATGGAAACCTCTCCTTAACATATGTGTTTTAAAAATCTTGAGGGAAAGCCTGAAGGGGAAAATCCAAAGAGGACAATATTTTCTAGCGGTAGGTTTGAGCTGTTGCAGACCCGTTATTCATGGTATACTTCTCTACATTTTAAGTAGTCCGAAATTGGTAAATCAGTACATTGGTCTTTCTGGATAGTATTAATTTTTTTTTTTTTTTTTTTATGTGTGATCTTATCTTTTTAGTTTTTACCTCATGAACTAATTAGTGGTTAGTTAGCTAGATTGAATTATCATATAAGTACACCAGGCCATATTTTTTTGTACACTTTGAGTATGACAACAACATCCTTTCATATTTGTTTCCTATAATAAAAAGGGGAGAGATGCTTACAAGTTCCTTTTGCAAAGAAACTGAAAATGAGGAGATTTCTTCTACTCAGCTGCACAGATATGATATCGATTTCCTTCTCCTCGTGCAGGTTTTAGATCGTGGAGAACGGATCGAGCTTCTGGTGGACAAAACAGAAAACCTACAATTCCAGGTACATCATATAACCCAGACTGTCACTTAAGAATCTTGAATGAGAAGTTGAAGATTTAACGTCGGGATCTCTGTTTAAATTTAGGCCGATAACTTTCACCGACAAGGGAGGCAACTTCGGCGAAAAATGTGGCTGCAGAGTTTACAAATGAAGCTGATGGTTGGGGGAGGAATCTTGGTGCTGTTCATCATACTTTGGTTTGTTGTATGTGGTGGTTTCAAATGTTGATTTTGGTAAAGTTAGTAGCATATGAGTGTTTTCTTAAACTTGGCTATGTATGCAAACTGTTACCAAGTCTATGTAATATATGCCTTGCCTGCCCCTCTTGTTCAGCTTTTAATTGCATCGAGAAAAGTCATCTTTTTCTCAACAATGTCTTGTCATTTGATCCAATAGTGTTCCATTACATATAAATAGATTTGATAAATAGTGATAACTCTCGGATAGAGTATTAGAACAGA ATGGAAACTTATCATTCAAGCTCTGCTGCTTCTCTGCAGTTGGCTGCTCTGCTACTGCTGCAGTTTGTGAGTGCTACTGCTTTGATTCTTCTCAGACAACCGTTGGAGATGAGTCAGAAAGGCCTAATATACAGCTTTGTTGCTAAAGGAACTGTTGTTTTAGCAGAACACACATCATTCTCAGGGAATTTTAGTACCATTGCTGTTCAATGCTTACAGAGATTGCCTTCTAACGGCAGCAAATGCACATACTCATGTGATGGATATACATTCAACTTTCTTCTTGACAGTGGATTTGTCTTTCTCGCTGTTGCGGATGAATCAGTTGGAAGGAATATGCCATTTGTATTTCTGGAGCGTGTGAAAGATGACTTTAAACAGCGTTATGGATCAAGTATCAAGGAAGAGGACCCTCACCCACTTGCAGATGATGAGGACGATGATGATCTATTTCTTGACCGATTCAGTGTTGCATACACTCTTGACAGAGAATTCGGGCCAAGGCTTAAGGAGCACATGCAATATTGCATGAATCATCCAGAAGAAATGAGTAAACTTTCCAAGCTGAAGGCTCAAATAACAGAGGTGAAAGGAGTTATGATGGATAACATTGAAAAGGTTTTAGATCGTGGAGAACGGATCGAGCTTCTGGTGGACAAAACAGAAAACCTACAATTCCAGGCCGATAACTTTCACCGACAAGGGAGGCAACTTCGGCGAAAAATGTGGCTGCAGAGTTTACAAATGAAGCTGATGGTTGGGGGAGGAATCTTGGTGCTGTTCATCATACTTTGGTTTGTTGTATGTGGTGGTTTCAAATGTTGATTTTGGTAAAGTTAGTAGCATATGAGTGTTTTCTTAAACTTGGCTATGTATGCAAACTGTTACCAAGTCTATGTAATATATGCCTTGCCTGCCCCTCTTGTTCAGCTTTTAATTGCATCGAGAAAAGTCATCTTTTTCTCAACAATGTCTTGTCATTTGATCCAATAGTGTTCCATTACATATAAATAGATTTGATAAATAGTGATAACTCTCGGATAGAGTATTAGAACAGA ATGGAAACTTATCATTCAAGCTCTGCTGCTTCTCTGCAGTTGGCTGCTCTGCTACTGCTGCAGTTTGTGAGTGCTACTGCTTTGATTCTTCTCAGACAACCGTTGGAGATGAGTCAGAAAGGCCTAATATACAGCTTTGTTGCTAAAGGAACTGTTGTTTTAGCAGAACACACATCATTCTCAGGGAATTTTAGTACCATTGCTGTTCAATGCTTACAGAGATTGCCTTCTAACGGCAGCAAATGCACATACTCATGTGATGGATATACATTCAACTTTCTTCTTGACAGTGGATTTGTCTTTCTCGCTGTTGCGGATGAATCAGTTGGAAGGAATATGCCATTTGTATTTCTGGAGCGTGTGAAAGATGACTTTAAACAGCGTTATGGATCAAGTATCAAGGAAGAGGACCCTCACCCACTTGCAGATGATGAGGACGATGATGATCTATTTCTTGACCGATTCAGTGTTGCATACACTCTTGACAGAGAATTCGGGCCAAGGCTTAAGGAGCACATGCAATATTGCATGAATCATCCAGAAGAAATGAGTAAACTTTCCAAGCTGAAGGCTCAAATAACAGAGGTGAAAGGAGTTATGATGGATAACATTGAAAAGGTTTTAGATCGTGGAGAACGGATCGAGCTTCTGGTGGACAAAACAGAAAACCTACAATTCCAGGCCGATAACTTTCACCGACAAGGGAGGCAACTTCGGCGAAAAATGTGGCTGCAGAGTTTACAAATGAAGCTGATGGTTGGGGGAGGAATCTTGGTGCTGTTCATCATACTTTGGTTTGTTGTATGTGGTGGTTTCAAATGTTGA METYHSSSAASLQLAALLLLQFVSATALILLRQPLEMSQKGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQRLPSNGSKCTYSCDGYTFNFLLDSGFVFLAVADESVGRNMPFVFLERVKDDFKQRYGSSIKEEDPHPLADDEDDDDLFLDRFSVAYTLDREFGPRLKEHMQYCMNHPEEMSKLSKLKAQITEVKGVMMDNIEKVLDRGERIELLVDKTENLQFQADNFHRQGRQLRRKMWLQSLQMKLMVGGGILVLFIILWFVVCGGFKC Homology
BLAST of CmaCh04G025160 vs. ExPASy Swiss-Prot
Match: Q9M376 (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana OX=3702 GN=VAMP727 PE=1 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-109 Identity = 195/238 (81.93%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy Swiss-Prot
Match: O48850 (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana OX=3702 GN=VAMP725 PE=2 SV=2) HSP 1 Score: 276.2 bits (705), Expect = 4.1e-73 Identity = 138/245 (56.33%), Postives = 183/245 (74.69%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy Swiss-Prot
Match: Q9MAS5 (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana OX=3702 GN=VAMP726 PE=2 SV=2) HSP 1 Score: 269.2 bits (687), Expect = 5.0e-71 Identity = 133/238 (55.88%), Postives = 177/238 (74.37%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy Swiss-Prot
Match: P47192 (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana OX=3702 GN=VAMP722 PE=2 SV=2) HSP 1 Score: 268.5 bits (685), Expect = 8.5e-71 Identity = 132/238 (55.46%), Postives = 178/238 (74.79%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy Swiss-Prot
Match: Q9ZTW3 (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana OX=3702 GN=VAMP721 PE=2 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 5.5e-70 Identity = 133/238 (55.88%), Postives = 177/238 (74.37%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy TrEMBL
Match: A0A6J1JTB2 (vesicle-associated membrane protein 727-like OS=Cucurbita maxima OX=3661 GN=LOC111487304 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy TrEMBL
Match: A0A6J1GVN0 (vesicle-associated membrane protein 727-like OS=Cucurbita moschata OX=3662 GN=LOC111457957 PE=3 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 3.8e-130 Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy TrEMBL
Match: A0A5D3CIL2 (Vesicle-associated membrane protein 727 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00880 PE=3 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127 Identity = 231/238 (97.06%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy TrEMBL
Match: A0A1S3C3Q2 (vesicle-associated membrane protein 727 OS=Cucumis melo OX=3656 GN=LOC103496513 PE=3 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127 Identity = 231/238 (97.06%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh04G025160 vs. ExPASy TrEMBL
Match: A0A0A0KE69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G045200 PE=3 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.3e-126 Identity = 227/238 (95.38%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh04G025160 vs. NCBI nr
Match: KAG6602253.1 (Vesicle-associated membrane protein 727, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 501.9 bits (1291), Expect = 3.5e-138 Identity = 255/257 (99.22%), Postives = 256/257 (99.61%), Query Frame = 0
BLAST of CmaCh04G025160 vs. NCBI nr
Match: XP_022990448.1 (vesicle-associated membrane protein 727-like [Cucurbita maxima]) HSP 1 Score: 475.3 bits (1222), Expect = 3.5e-130 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh04G025160 vs. NCBI nr
Match: XP_022956192.1 (vesicle-associated membrane protein 727-like [Cucurbita moschata] >KAG7032933.1 Vesicle-associated membrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 474.2 bits (1219), Expect = 7.8e-130 Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh04G025160 vs. NCBI nr
Match: XP_023523515.1 (vesicle-associated membrane protein 727-like [Cucurbita pepo subsp. pepo] >XP_023523522.1 vesicle-associated membrane protein 727-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 473.0 bits (1216), Expect = 1.7e-129 Identity = 236/238 (99.16%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CmaCh04G025160 vs. NCBI nr
Match: XP_008456603.1 (PREDICTED: vesicle-associated membrane protein 727 [Cucumis melo] >TYK11767.1 vesicle-associated membrane protein 727 [Cucumis melo var. makuwa]) HSP 1 Score: 465.3 bits (1196), Expect = 3.6e-127 Identity = 231/238 (97.06%), Postives = 237/238 (99.58%), Query Frame = 0
BLAST of CmaCh04G025160 vs. TAIR 10
Match: AT3G54300.1 (vesicle-associated membrane protein 727 ) HSP 1 Score: 397.5 bits (1020), Expect = 8.6e-111 Identity = 195/238 (81.93%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of CmaCh04G025160 vs. TAIR 10
Match: AT3G54300.2 (vesicle-associated membrane protein 727 ) HSP 1 Score: 397.5 bits (1020), Expect = 8.6e-111 Identity = 195/238 (81.93%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of CmaCh04G025160 vs. TAIR 10
Match: AT2G32670.1 (vesicle-associated membrane protein 725 ) HSP 1 Score: 276.2 bits (705), Expect = 2.9e-74 Identity = 138/245 (56.33%), Postives = 183/245 (74.69%), Query Frame = 0
BLAST of CmaCh04G025160 vs. TAIR 10
Match: AT1G04760.1 (vesicle-associated membrane protein 726 ) HSP 1 Score: 269.2 bits (687), Expect = 3.5e-72 Identity = 133/238 (55.88%), Postives = 177/238 (74.37%), Query Frame = 0
BLAST of CmaCh04G025160 vs. TAIR 10
Match: AT2G33120.1 (synaptobrevin-related protein 1 ) HSP 1 Score: 268.5 bits (685), Expect = 6.0e-72 Identity = 132/238 (55.46%), Postives = 178/238 (74.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|