CmaCh04G025120 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCCGACAGAGTAAAATCCAATTTGGAAACAAACCCAATTATACCAAACAACGTGTTGATTTCAAATTCTCTCCTTTTTATTTCTTTAAACCCAAATTCCCATAATTTCTCAATATCCAATCCATTGTTTCTCTCCGTGCGAAGTGCTATATATTCAAATTTACGAACCCACAATTTCCCCAATCCTTCCATGTGCAATCTCCAAGAAACTGATTCATTTCAGTAAAAAAGAATAGAAAAACCTCCATCAAATCCTCTCTCTGTTTCTCTGTTTCTTCATCTTTCTCTGTTTTATGGTTGTTATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCAGTGGACTCGGTCGGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTGGTACCAGCGGACTTGCCTGATCGGTGGCAAAGGGTCGCTGACCTTGTCCCTGGAAAGTTGCCGAGGGAGGTTAAAGATCACTATGAGGCTCTGGTTTATGACGTCCTGGAAATTGACTCTGGTCGAGTTGAGTTGCCGAGTTATTCTGATGAATCGGCAGTGGGTTCGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCCTGGTGGGGACAGCGAGAGGAAGAAGGGGACGCCATGGACCGAAGAAGAACATAGGTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTCTCTTAATCCTCAATTTAGTCCTCTGTGTTTCTGATTGGCTGCTGAGAAAATGGTGGAAAAGGGAAAGGAAAGTGGCGAGAAAATTTTCATGTCTGTTGGGTTTTGTGTGTCTTAATTCCTGTTCTATCTTCCAAATTGGGAATTCCAGAAACATAGAACCAACCCAGTTTCTGATTTAGAAGTGCTTTTTCTTGTATAAAGTTTTAACTAAGGATGGTTATCTAAGAAATGGAAGCTCTCAAGGAAACTATGGCTTATATGGAATGACAAATCTTTACAAGTTGTAAGCCATTTGGGCTCTCTATTGGAAGAACAAGACTTTCCCATGAACAAGAATCAGGTGGCTGTCTGGGGATTTCTAGTCATTAACAAGGAAAACCATCAGTCAGAACTGTGTTCTTTTGAGTCCAAGCTCACCGTCAGCAGATATTGTTCTCCTTCGGCTTTTCCTTGCGAGTTCTCTCTCAAGGTTTTTAAAATGTGTCTACTAGGAGAGGTTTCCACACCCTTATAACGAATGTTTCGTTCTCCTTCCTAATCGATGCAGGGTCTCACAGTCCACCTCTTTCGGGAAGAGGCTCGAACAAAGCCTAATTTTCTTGACTAAGAACATGACGCTTGGGACTATTGATCTGTCATATAAGTATTCTAAGCTAGCTTTTTCAACAACCAGTTAAGCTTGTGACATTGACATTCAAAAACTTTATTAGGTAGCTAGATGACAACTGGGTTCACGATTTGCCTCTTTAACAAATGAGCTGACCCATCTTGGCCATGTTTGGGCTAATGGCTGAGAAGAATGTTGCTGTCTATTTGCATATTGCTTTGTTAACAACTTATTATTGATATTAGCTTCAATATCAAGTTTTTGAGCATTGGCCTAAAAGCTAAATCCAATAGTTGCTCTAGTTTTCAACTTTTGACCCCTATGTTTCGAGATCTCTCACTGTGATCAGTTCGTATATATACATAAAATCAGGTTTCTTTACTTTCTGAGATTTCTTATGGCGATATGTTTTTAGAACTGTAATGTAGAAGCTTGAATTTCGGAGACCAATGGGAGAAACAAAGCAGGGAGTATCGAATGATGTTTGTGTTACTCTAGGCTTTTTTCGCTCTTTGGTTAGTCTTCTGATGCAAAGTTTTCTGTTTGGCATTATGACAGGCTATTCCTCCTTGGACTGAAGAAATTTGGTAAGGGTGATTGGAGGAGCATCTCAAGGAACGTGGTGATCACAAGAACACCAACTCAAGTAGCTAGCCATGCTCAGAAATACTTTCTCCGACAAAACTCCGGGAAGAAAGAAAGGAAACGATCAAGCATTCACGACATCACTACAGTTGACAGCAACTCCGCCCCTATACCTTTCGACCCGAATTGGATATCCCCAGTCCCCAACCCAATCATTCAATCAAGTATGCAGCAGCAGCTAAGCCCCACAGGTCATTTGCAAGACCAAGGAGGTGCACTCCAAACTTACAGGTTCCCGATGTAGGGATCGACACAATATGGATAGAAACTACTTAAAACATTATTGCAATGTAAATACACCGACGAATGTGTAAAGGCGTTGGAACGTACCTGGGGAGGTTTGTTGTTTTGGTTGCCACAGTTTAGGGGAAGCTGATGATATGGAAGTTTGAACAGTAGTAGGATCCTGTTTATAAGTAAAATAGAAGAAAGCAAAAGGATTAGCAGTGTTAGTTACTTGGTTAATGTAAAAGAAAGAAGAAAGGTGTGGGGTTAGGAAAGGAAAACACAGGATATGAATAGAAATTTCTTTTGTTGGATTGTGAGTATTCCTGCAATCAATTTTGGTGCAGGATGCTTTCACTTTCATTCATGAGATGACTGTTTGTTTTATAAACATTATTCAGCAGATGACATCGTTTTAAGTCATTACTAAGTTGTTTTTATCTAAGAAATGTATTCTAATTTTTGAAAAAA AGCCGACAGAGTAAAATCCAATTTGGAAACAAACCCAATTATACCAAACAACGTGTTGATTTCAAATTCTCTCCTTTTTATTTCTTTAAACCCAAATTCCCATAATTTCTCAATATCCAATCCATTGTTTCTCTCCGTGCGAAGTGCTATATATTCAAATTTACGAACCCACAATTTCCCCAATCCTTCCATGTGCAATCTCCAAGAAACTGATTCATTTCAGTAAAAAAGAATAGAAAAACCTCCATCAAATCCTCTCTCTGTTTCTCTGTTTCTTCATCTTTCTCTGTTTTATGGTTGTTATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCAGTGGACTCGGTCGGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTGGTACCAGCGGACTTGCCTGATCGGTGGCAAAGGGTCGCTGACCTTGTCCCTGGAAAGTTGCCGAGGGAGGTTAAAGATCACTATGAGGCTCTGGTTTATGACGTCCTGGAAATTGACTCTGGTCGAGTTGAGTTGCCGAGTTATTCTGATGAATCGGCAGTGGGTTCGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCCTGGTGGGGACAGCGAGAGGAAGAAGGGGACGCCATGGACCGAAGAAGAACATAGGCTATTCCTCCTTGGACTGAAGAAATTTGGTAAGGGTGATTGGAGGAGCATCTCAAGGAACGTGGTGATCACAAGAACACCAACTCAAGTAGCTAGCCATGCTCAGAAATACTTTCTCCGACAAAACTCCGGGAAGAAAGAAAGGAAACGATCAAGCATTCACGACATCACTACAGTTGACAGCAACTCCGCCCCTATACCTTTCGACCCGAATTGGATATCCCCAGTCCCCAACCCAATCATTCAATCAAGTATGCAGCAGCAGCTAAGCCCCACAGGTCATTTGCAAGACCAAGGAGGTGCACTCCAAACTTACAGGTTCCCGATGTAGGGATCGACACAATATGGATAGAAACTACTTAAAACATTATTGCAATGTAAATACACCGACGAATGTGTAAAGGCGTTGGAACGTACCTGGGGAGGTTTGTTGTTTTGGTTGCCACAGTTTAGGGGAAGCTGATGATATGGAAGTTTGAACAGTAGTAGGATCCTGTTTATAAGTAAAATAGAAGAAAGCAAAAGGATTAGCAGTGTTAGTTACTTGGTTAATGTAAAAGAAAGAAGAAAGGTGTGGGGTTAGGAAAGGAAAACACAGGATATGAATAGAAATTTCTTTTGTTGGATTGTGAGTATTCCTGCAATCAATTTTGGTGCAGGATGCTTTCACTTTCATTCATGAGATGACTGTTTGTTTTATAAACATTATTCAGCAGATGACATCGTTTTAAGTCATTACTAAGTTGTTTTTATCTAAGAAATGTATTCTAATTTTTGAAAAAA ATGGTTGTTATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCAGTGGACTCGGTCGGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTGGTACCAGCGGACTTGCCTGATCGGTGGCAAAGGGTCGCTGACCTTGTCCCTGGAAAGTTGCCGAGGGAGGTTAAAGATCACTATGAGGCTCTGGTTTATGACGTCCTGGAAATTGACTCTGGTCGAGTTGAGTTGCCGAGTTATTCTGATGAATCGGCAGTGGGTTCGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCCTGGTGGGGACAGCGAGAGGAAGAAGGGGACGCCATGGACCGAAGAAGAACATAGGCTATTCCTCCTTGGACTGAAGAAATTTGGTAAGGGTGATTGGAGGAGCATCTCAAGGAACGTGGTGATCACAAGAACACCAACTCAAGTAGCTAGCCATGCTCAGAAATACTTTCTCCGACAAAACTCCGGGAAGAAAGAAAGGAAACGATCAAGCATTCACGACATCACTACAGTTGACAGCAACTCCGCCCCTATACCTTTCGACCCGAATTGGATATCCCCAGTCCCCAACCCAATCATTCAATCAAGTATGCAGCAGCAGCTAAGCCCCACAGGTCATTTGCAAGACCAAGGAGGTGCACTCCAAACTTACAGGTTCCCGATGTAG MVVMFHDSRWTTMTQSSTQWTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVELPSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQNSGKKERKRSSIHDITTVDSNSAPIPFDPNWISPVPNPIIQSSMQQQLSPTGHLQDQGGALQTYRFPM Homology
BLAST of CmaCh04G025120 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.6e-48 Identity = 113/224 (50.45%), Postives = 143/224 (63.84%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.1e-45 Identity = 98/191 (51.31%), Postives = 122/191 (63.87%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43 Identity = 105/203 (51.72%), Postives = 125/203 (61.58%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43 Identity = 105/203 (51.72%), Postives = 125/203 (61.58%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25 Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy TrEMBL
Match: A0A6J1JTB6 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111487307 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 5.0e-131 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy TrEMBL
Match: A0A6J1HBL5 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111461963 PE=4 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 4.2e-130 Identity = 232/234 (99.15%), Postives = 233/234 (99.57%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy TrEMBL
Match: A0A6J1JWG4 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111488967 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 3.0e-112 Identity = 205/236 (86.86%), Postives = 217/236 (91.95%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy TrEMBL
Match: A0A1S3C3Q6 (transcription factor DIVARICATA OS=Cucumis melo OX=3656 GN=LOC103496517 PE=4 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.6e-111 Identity = 207/234 (88.46%), Postives = 216/234 (92.31%), Query Frame = 0
BLAST of CmaCh04G025120 vs. ExPASy TrEMBL
Match: A0A0A0KE73 (Syringolide-induced protein 1-3-1B OS=Cucumis sativus OX=3659 GN=Csa_6G046240 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.8e-110 Identity = 205/234 (87.61%), Postives = 215/234 (91.88%), Query Frame = 0
BLAST of CmaCh04G025120 vs. NCBI nr
Match: XP_022990453.1 (transcription factor DIVARICATA-like [Cucurbita maxima]) HSP 1 Score: 476.9 bits (1226), Expect = 1.0e-130 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of CmaCh04G025120 vs. NCBI nr
Match: XP_022961378.1 (transcription factor DIVARICATA-like [Cucurbita moschata] >KAG6602250.1 Transcription factor DIVARICATA, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032929.1 Transcription factor DIVARICATA [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 473.8 bits (1218), Expect = 8.7e-130 Identity = 232/234 (99.15%), Postives = 233/234 (99.57%), Query Frame = 0
BLAST of CmaCh04G025120 vs. NCBI nr
Match: XP_023543041.1 (transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 430.6 bits (1106), Expect = 8.4e-117 Identity = 229/309 (74.11%), Postives = 231/309 (74.76%), Query Frame = 0
BLAST of CmaCh04G025120 vs. NCBI nr
Match: XP_038886543.1 (transcription factor DIVARICATA [Benincasa hispida]) HSP 1 Score: 422.5 bits (1085), Expect = 2.3e-114 Identity = 210/234 (89.74%), Postives = 220/234 (94.02%), Query Frame = 0
BLAST of CmaCh04G025120 vs. NCBI nr
Match: XP_023550938.1 (transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 414.5 bits (1064), Expect = 6.2e-112 Identity = 205/236 (86.86%), Postives = 217/236 (91.95%), Query Frame = 0
BLAST of CmaCh04G025120 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 261.5 bits (667), Expect = 6.3e-70 Identity = 138/216 (63.89%), Postives = 167/216 (77.31%), Query Frame = 0
BLAST of CmaCh04G025120 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46 Identity = 96/198 (48.48%), Postives = 125/198 (63.13%), Query Frame = 0
BLAST of CmaCh04G025120 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 183.3 bits (464), Expect = 2.2e-46 Identity = 98/191 (51.31%), Postives = 122/191 (63.87%), Query Frame = 0
BLAST of CmaCh04G025120 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 182.6 bits (462), Expect = 3.7e-46 Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 0
BLAST of CmaCh04G025120 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 182.6 bits (462), Expect = 3.7e-46 Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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