CmaCh04G024650 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G024650
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description30S ribosomal protein S1-like protein A isoform X2
LocationCma_Chr04: 16953094 .. 16956252 (+)
RNA-Seq ExpressionCmaCh04G024650
SyntenyCmaCh04G024650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGACTCCCAAATTCACCCTATTCGGGTCCAGGGTGGCTGCAGTCACATCGCCTCAGTATCCACCCAAGGGCTCAGCCTCCAAGTTCAATATCAGGCCCATTTTGGATCCCCAGCCCACGGCCCATCTCTCCTACTTCACTCCCCAGGCCCAGAACATTCGCGCCGAAGAATATTAACAGAGGACGGATATTGCACTCGAAAATGCACTTTCAAGTTTCAAGGCCGAATGCGACGGCGCCGAGCTCAGCTCATGAGGTGGACAGCCGAAAGAGATGCTAACCGTTGCGGGACTTCGATCCTGTAAGTATCTTTCCGTTCCTAATTTGTCATCCGAGCCTCAAAATTTCTTAGTTTCATCCAATTCCTTTAGAACATTTCGCACCTTTCCCAGATTTCTAACGCCACAAATATCAAATTCAAAGTTCTGTTCCACTTCTTATTGGTCCGATAACTGCAATAAATCTAAGAAGTTTACATTTCGGGAAAGAAATAGCGTAATATTTTGCTCTAGGAATGGTGTTCTTCGTAATTTATCGGGCAACCAGGATGGAACTGAAGAGATTTATGAACTTAGTTTGTTAAAAAAACCCTCTCGTGCTTCTATAAGCAACGGGAGTTCATCAGAAGTTCATAAAGAGGTTGTAAATCCCGATGAGAATGAGAGCTTGACGCTATTTATGAAGTTCTTTAAGATTATAGATTCTGTGGAAGATGAAGAAGAGGAAAAAGCATTACAAGCATTTGAAGAGAAAATTGATGGAGAGGATGAATCTGATAAAGAAGCCAATAAATTAAATGTTGAGTACTATGAGCCCAAACCTGGAGATGTCGTGGTTGGTGTAGTTGTCTCAGGTGACGAAAACAAGCTTGATATCGATATGGGGGCGGATTTATTAGCAACAATGTTGACAAAAGAAGTGCTTCGTTTGTATGACAAAGAGATGGAATTCTTGGATCTCAACAAGGATGCCGAGTCTTTTATGGTGAATGGGAAGATGGGATTGGTGAAATATGATAATGCTGTTTGCGATGGACCAGGGCCGGGGCAACCTATCGTAGAGACTGGCACGGTTTTGTTTGCAGAGGTTTTGGGAAGGAGACTCGGTGGTCGACCATTGCTAACGACTAGAAGATTGTTTCGGTGGTTAGCTTGGCATCGAGTGAGGCAGGTTCTTTTCTTGACAAGCTTCTCTGCTTACTGAAGTTTCCGTCTTAGGGGGCACAAAGAAGAAATGTATGTATTTGTTGTGGTTTCCTTGTTCGACAGATAAAACGACTCAACGAGCCAATTGAAGTTAGAGTATCAGAGTGGAATACAGGAGGCCTTCTTACAAGAATTGAGGTTGTTTATGTGATAGTAATTCATTTGGTCTTGGACTTCTGTTTCGTTTGTCTATGCTTATGTTTTGTTTCGGTTCGGTTCTGAACTTTTGTTATGCAGGGTTTGCGAGCATTTCTTCCGAAGGGCGAGTTGTTGAATAGAGCAAATAACTTCACGGAGTGGAAAGAATATGTGAGTAGGCTTCGGTTTCTTTGATTTTTCAGCTGCTATATGCGTTATCTTAGAAAAGCGTTCGGTTCACCTGTCATGTAAATGGCCTCTCCCCGTTCCATTGAAAATCATTGTTGCCCCGAGACTACGAAGTTACCATGTCCTATAAACATTGATTTGTTTCTTTCTTTCATGAAAATGTTGTTGTATCATGTTCTTATTCATGATTACTCAAATCCCTTCGAACTGGTGCGCCTTTCGCATTAGATTCCTCTGTGCCTTGAACCGAGCTCTTTGCAATAGCTATCTTACTAAACACTCTTTGCTTGCTGCAACATTTGCTTGACATAATTGGACAAAAGGACTGTATAGACGACCTTAACTCACTGTACTTGTCTCCTATCGTGCAGGTGGGATGTCGGATCTTTGTGCAAATCACTCGAATAGTTGAAGCTAAGAACGATGTGATACTAAGTGAGAGACGAGCTTGGGTCAGTTTCACCACTACATTTTTCTATTTTCTCCTCAAGGTATTGCATGAGTACACCAATAAATAGGCGATTTTGTGTCTTTTATCTCAGGAAATGTTGTACCTACGAGAGGGAACGCTTCTAGACGGGACCGTGACGAAAATATTTCCTTTTGGAGCTCAAATTAGAATTGGCGATACGAACAGATGGTGAGTTTCAATTTACTTAGCCTGCAACTTTCTCCCGAGTTCAGTTTGATGAAATTAAAAATTTAGCGTTATGTTTTGACCGGGCATACCATATTCTGTTGTTCTTATCGTTCTTTAGTTTCTGAGAATTATTGATACATCCATCTGAATGTTCCTCAGCGGTTTACTCCATGTTTCAAACATCACCCGTGCCCGAGTTACCTCGGTGAGTGACTTACTTGTAGTGGGCGAAAAGGTCAAAGTTCTAGTCGTGAAGTCAAATTTTCCTAACAAGATATCTTTAAGGTAATTCAGAAACATATTATTATTCAATCTAACAGTCTTATGATTGATGCATCTTATAACTTAAAATTTTGCCTTTATGGTTTTACAGTATAGCTGACCTCGAAAGCGTGCCCGGACTCTTTATATCGAACAAAGAGGTAGCACACATCGATCCTCCTCGCCGATGAACTTCATTTTCTTCAAAAATTGACCGAGTCGTTTTTTCTTTTCCTTTATCAGAAAGTATTTTCAGAGGCCAAGATCATGGCTAAGAAGTATAGACAAAAGCTACCCGTGATCAAAGGCGTAGCCAGGCCGTTACCTGCTCCCGTTCCAAGGTCCGAATGTGCTCCAACTACAGATCTTCCATTCGATAAAGAATCGAGTATGTATGCGAACTGGAAGTGGTTTAAATTCGAAAGGTAGTTGTTTATATGATCTCTCTTTCATGCTTCCTAACCAACCAACCCTTCATGGCAAGAGTTTCCTTAGTTCGACGAATAAGTTTTCGATATCATTTGTCGTTGGCCGTTCCTGTTTGATTTTGTGGAACGATATATAATCCAGGGAATGAGAAACGACGTTACTTGAACAGGATCGGGATCGGTGTCCTTGAGTTTTAAGGAGAGAAAATCCAGGGAAAGGGAAGTTTTAAAGATCAAATTTTGAACATCAAGTCTTGTTCAGCTCTTCTTTATTGAGGTTTCTACATGGTGAAT

mRNA sequence

ATGTGGGACTCCCAAATTCACCCTATTCGGGTCCAGGGTGGCTGCAGTCACATCGCCTCAGTATCCACCCAAGGGCTCAGCCTCCAAGTTCAATATCAGGCCCATTTTGGATCCCCAGCCCACGGCCCATCTCTCCTACTTCACTCCCCAGGCCCAGAACATTCGCGCCGAAGAATATTAACAGAGGACGGATATTGCACTCGAAAATGCACTTTCAAGTTTCAAGGCCGAATGCGACGGCGCCGAGCTCAGCTCATGAGGTGGACAGCCGAAAGAGATGCTAACCGTTGCGGGACTTCGATCCTATTTCTAACGCCACAAATATCAAATTCAAAGTTCTGTTCCACTTCTTATTGGTCCGATAACTGCAATAAATCTAAGAAGTTTACATTTCGGGAAAGAAATAGCGTAATATTTTGCTCTAGGAATGGTGTTCTTCGTAATTTATCGGGCAACCAGGATGGAACTGAAGAGATTTATGAACTTAGTTTGTTAAAAAAACCCTCTCGTGCTTCTATAAGCAACGGGAGTTCATCAGAAGTTCATAAAGAGGTTGTAAATCCCGATGAGAATGAGAGCTTGACGCTATTTATGAAGTTCTTTAAGATTATAGATTCTGTGGAAGATGAAGAAGAGGAAAAAGCATTACAAGCATTTGAAGAGAAAATTGATGGAGAGGATGAATCTGATAAAGAAGCCAATAAATTAAATGTTGAGTACTATGAGCCCAAACCTGGAGATGTCGTGGTTGGTGTAGTTGTCTCAGGTGACGAAAACAAGCTTGATATCGATATGGGGGCGGATTTATTAGCAACAATGTTGACAAAAGAAGTGCTTCGTTTGTATGACAAAGAGATGGAATTCTTGGATCTCAACAAGGATGCCGAGTCTTTTATGGTGAATGGGAAGATGGGATTGGTGAAATATGATAATGCTGTTTGCGATGGACCAGGGCCGGGGCAACCTATCGTAGAGACTGGCACGGTTTTGTTTGCAGAGGTTTTGGGAAGGAGACTCGGTGGTCGACCATTGCTAACGACTAGAAGATTGTTTCGGTGGTTAGCTTGGCATCGAGTGAGGCAGATAAAACGACTCAACGAGCCAATTGAAGTTAGAGTATCAGAGTGGAATACAGGAGGCCTTCTTACAAGAATTGAGGGTTTGCGAGCATTTCTTCCGAAGGGCGAGTTGTTGAATAGAGCAAATAACTTCACGGAGTGGAAAGAATATGTGGGATGTCGGATCTTTGTGCAAATCACTCGAATAGTTGAAGCTAAGAACGATGTGATACTAAGTGAGAGACGAGCTTGGGAAATGTTGTACCTACGAGAGGGAACGCTTCTAGACGGGACCGTGACGAAAATATTTCCTTTTGGAGCTCAAATTAGAATTGGCGATACGAACAGATGCGGTTTACTCCATGTTTCAAACATCACCCGTGCCCGAGTTACCTCGGTGAGTGACTTACTTGTAGTGGGCGAAAAGGTCAAAGTTCTAGTCGTGAAGTCAAATTTTCCTAACAAGATATCTTTAAGTATAGCTGACCTCGAAAGCGTGCCCGGACTCTTTATATCGAACAAAGAGAAAGTATTTTCAGAGGCCAAGATCATGGCTAAGAAGTATAGACAAAAGCTACCCGTGATCAAAGGCGTAGCCAGGCCGTTACCTGCTCCCGTTCCAAGGTCCGAATGTGCTCCAACTACAGATCTTCCATTCGATAAAGAATCGAGTATGTATGCGAACTGGAAGTGGTTTAAATTCGAAAGGTAGTTGTTTATATGATCTCTCTTTCATGCTTCCTAACCAACCAACCCTTCATGGCAAGAGTTTCCTTAGTTCGACGAATAAGTTTTCGATATCATTTGTCGTTGGCCGTTCCTGTTTGATTTTGTGGAACGATATATAATCCAGGGAATGAGAAACGACGTTACTTGAACAGGATCGGGATCGGTGTCCTTGAGTTTTAAGGAGAGAAAATCCAGGGAAAGGGAAGTTTTAAAGATCAAATTTTGAACATCAAGTCTTGTTCAGCTCTTCTTTATTGAGGTTTCTACATGGTGAAT

Coding sequence (CDS)

ATGTGGGACTCCCAAATTCACCCTATTCGGGTCCAGGGTGGCTGCAGTCACATCGCCTCAGTATCCACCCAAGGGCTCAGCCTCCAAGTTCAATATCAGGCCCATTTTGGATCCCCAGCCCACGGCCCATCTCTCCTACTTCACTCCCCAGGCCCAGAACATTCGCGCCGAAGAATATTAACAGAGGACGGATATTGCACTCGAAAATGCACTTTCAAGTTTCAAGGCCGAATGCGACGGCGCCGAGCTCAGCTCATGAGGTGGACAGCCGAAAGAGATGCTAACCGTTGCGGGACTTCGATCCTATTTCTAACGCCACAAATATCAAATTCAAAGTTCTGTTCCACTTCTTATTGGTCCGATAACTGCAATAAATCTAAGAAGTTTACATTTCGGGAAAGAAATAGCGTAATATTTTGCTCTAGGAATGGTGTTCTTCGTAATTTATCGGGCAACCAGGATGGAACTGAAGAGATTTATGAACTTAGTTTGTTAAAAAAACCCTCTCGTGCTTCTATAAGCAACGGGAGTTCATCAGAAGTTCATAAAGAGGTTGTAAATCCCGATGAGAATGAGAGCTTGACGCTATTTATGAAGTTCTTTAAGATTATAGATTCTGTGGAAGATGAAGAAGAGGAAAAAGCATTACAAGCATTTGAAGAGAAAATTGATGGAGAGGATGAATCTGATAAAGAAGCCAATAAATTAAATGTTGAGTACTATGAGCCCAAACCTGGAGATGTCGTGGTTGGTGTAGTTGTCTCAGGTGACGAAAACAAGCTTGATATCGATATGGGGGCGGATTTATTAGCAACAATGTTGACAAAAGAAGTGCTTCGTTTGTATGACAAAGAGATGGAATTCTTGGATCTCAACAAGGATGCCGAGTCTTTTATGGTGAATGGGAAGATGGGATTGGTGAAATATGATAATGCTGTTTGCGATGGACCAGGGCCGGGGCAACCTATCGTAGAGACTGGCACGGTTTTGTTTGCAGAGGTTTTGGGAAGGAGACTCGGTGGTCGACCATTGCTAACGACTAGAAGATTGTTTCGGTGGTTAGCTTGGCATCGAGTGAGGCAGATAAAACGACTCAACGAGCCAATTGAAGTTAGAGTATCAGAGTGGAATACAGGAGGCCTTCTTACAAGAATTGAGGGTTTGCGAGCATTTCTTCCGAAGGGCGAGTTGTTGAATAGAGCAAATAACTTCACGGAGTGGAAAGAATATGTGGGATGTCGGATCTTTGTGCAAATCACTCGAATAGTTGAAGCTAAGAACGATGTGATACTAAGTGAGAGACGAGCTTGGGAAATGTTGTACCTACGAGAGGGAACGCTTCTAGACGGGACCGTGACGAAAATATTTCCTTTTGGAGCTCAAATTAGAATTGGCGATACGAACAGATGCGGTTTACTCCATGTTTCAAACATCACCCGTGCCCGAGTTACCTCGGTGAGTGACTTACTTGTAGTGGGCGAAAAGGTCAAAGTTCTAGTCGTGAAGTCAAATTTTCCTAACAAGATATCTTTAAGTATAGCTGACCTCGAAAGCGTGCCCGGACTCTTTATATCGAACAAAGAGAAAGTATTTTCAGAGGCCAAGATCATGGCTAAGAAGTATAGACAAAAGCTACCCGTGATCAAAGGCGTAGCCAGGCCGTTACCTGCTCCCGTTCCAAGGTCCGAATGTGCTCCAACTACAGATCTTCCATTCGATAAAGAATCGAGTATGTATGCGAACTGGAAGTGGTTTAAATTCGAAAGGTAG

Protein sequence

MWDSQIHPIRVQGGCSHIASVSTQGLSLQVQYQAHFGSPAHGPSLLLHSPGPEHSRRRILTEDGYCTRKCTFKFQGRMRRRRAQLMRWTAERDANRCGTSILFLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYELSLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANWKWFKFER
Homology
[Close]
BLAST of CmaCh04G024650 vs. ExPASy Swiss-Prot
Match: Q9M9H4 (Protein PIGMENT DEFECTIVE 338, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE338 PE=1 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.6e-133
Identity = 265/468 (56.62%), Postives = 335/468 (71.58%), Query Frame = 0 

Query: 127 KKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYELSLLKKPSRASISNGSSSEVHKEVV 186
           ++F  R    + FCSR  V    +G     EEI    LL KP      N      ++E  
Sbjct: 63  REFAVRGAYGIRFCSREDVSGVGNGGIVAEEEI---ELLNKP------NPLPKSENEESG 122

Query: 187 NPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPG 246
             D++  L  F+KFFK       EEE + +         E E   E ++++VEYY+PKPG
Sbjct: 123 KADDDAILEPFLKFFK------PEEEGEGI---------ESEVSDETDRVSVEYYDPKPG 182

Query: 247 DVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLYDKEMEFL--DLNKDAESFMVNGKM 306
           D VVGVVVSG+ENKLD+++GAD+L TMLTKE+L LYDKE+++L  DL  DAE F+VNGKM
Sbjct: 183 DFVVGVVVSGNENKLDVNIGADMLGTMLTKEILPLYDKELDYLLCDLKYDAEEFLVNGKM 242

Query: 307 GLVKYDN---AVCDGPGPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQ 366
           G+VK D+    + +    G+P+VE GTV+FAEVLGR L GRPLL++RR FR +AWHRVRQ
Sbjct: 243 GIVKDDDEGVEIAEFARQGRPVVEIGTVVFAEVLGRTLSGRPLLSSRRYFRRIAWHRVRQ 302

Query: 367 IKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITR 426
           IK+LNEPIEV+++EWNTGGLLTRIEGLRAF+PK EL+ + N FTE KE VG R  VQITR
Sbjct: 303 IKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNTFTELKENVGRRFLVQITR 362

Query: 427 IVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRA 486
           + E KND+ILSE+ AWE LYLREGTLL+GTV KI P+GAQ+++GD++R GLLH+SNITR 
Sbjct: 363 LNEDKNDLILSEKVAWEKLYLREGTLLEGTVVKILPYGAQVKLGDSSRSGLLHISNITRR 422

Query: 487 RVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKY 546
           R+ SVSD+L V E VKVLVVKS FP+KISLSIADLES PGLFIS++EKVF+EA+ MAKKY
Sbjct: 423 RIGSVSDVLQVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKY 482

Query: 547 RQKLPVIKGVARPLPAPVPRSECAP-TTDLPFDKESSMYANWKWFKFE 589
           R+K+P++        A  P S+  P T+  P  K+  +YANW+WFKFE
Sbjct: 483 REKMPLV--------ATSPISDRPPITSSFPQGKDEEIYANWEWFKFE 498

[Close]
BLAST of CmaCh04G024650 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 110.5 bits (275), Expect = 6.4e-23
Identity = 73/209 (34.93%), Postives = 114/209 (54.55%), Query Frame = 0 

Query: 341 GRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNR 400
           G+  L+ RR+    AW RVRQ++  +  +   V   N GG L RIEGLR F+P   +  R
Sbjct: 94  GQLTLSIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFIPGSHISTR 153

Query: 401 ANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW---EMLYLREGTLLDGTVTKIFP 460
                  ++ VG  + ++   + E +N ++LS RRA    +M  L  G ++ G V  I P
Sbjct: 154 KAK----EDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGIKP 213

Query: 461 FGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFP-NKISLSIADL 520
           +GA I IG  +  GLLH+S I+   + +   +  V ++VKV+++  +    +ISLS   L
Sbjct: 214 YGAFIDIGGVS--GLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRISLSTKQL 273

Query: 521 ESVPGLFISNKEKVFSEAKIMAKKYRQKL 546
           E  PG  + N E V+ +A+ MA +YR+KL
Sbjct: 274 EPEPGDMVRNPEVVYEKAEEMAAQYREKL 296

[Close]
BLAST of CmaCh04G024650 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.0e-22
Identity = 66/213 (30.99%), Postives = 125/213 (58.69%), Query Frame = 0 

Query: 344 LLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANN 403
           +L+ R++   LAW R RQ++  +  ++ ++   N GG++  +EGLR F+P  ++ ++++ 
Sbjct: 162 ILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSA 221

Query: 404 FTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW--EMLYLREGTLLDGTVTKIFPFGAQ 463
               +E +   I ++   + E ++ +++S R+A       L  G+++ GTV  + P+GA 
Sbjct: 222 ----EELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAF 281

Query: 464 IRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFP-NKISLSIADLESVP 523
           I IG  N  GLLHVS I+  RV+ ++ +L  G+ +KV+++  +    ++SLS   LE  P
Sbjct: 282 IDIGGIN--GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 341

Query: 524 GLFISNKEKVFSEAKIMAKKYRQKLPVIKGVAR 554
           G  I N + VF +A+ MA+ +RQ++   + +AR
Sbjct: 342 GDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMAR 368

[Close]
BLAST of CmaCh04G024650 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-21
Identity = 70/213 (32.86%), Postives = 121/213 (56.81%), Query Frame = 0 

Query: 344 LLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANN 403
           LL+ R +   LAW R RQ++  +  ++ +V   N GGL+  +EGLR F+P  ++ ++A  
Sbjct: 165 LLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKA-- 224

Query: 404 FTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW--EMLYLREGTLLDGTVTKIFPFGAQ 463
               +E +   I ++   + E +  ++LS R+A       L  G+++ G V  + P+GA 
Sbjct: 225 --AAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAF 284

Query: 464 IRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFP-NKISLSIADLESVP 523
           I IG  N  GLLHVS I+  RV+ ++ +L  G+ +KV+++  +    ++SLS   LE  P
Sbjct: 285 IDIGGIN--GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTP 344

Query: 524 GLFISNKEKVFSEAKIMAKKYRQKLPVIKGVAR 554
           G  I N + VF +A+ MA+ +RQ++   + +AR
Sbjct: 345 GDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMAR 371

[Close]
BLAST of CmaCh04G024650 vs. ExPASy Swiss-Prot
Match: P73530 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1A PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.6e-21
Identity = 92/325 (28.31%), Postives = 148/325 (45.54%), Query Frame = 0 

Query: 241 YEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEV-LRLYDKEMEFLDLNKDAESFM 300
           Y   PGD+V G V S +     ID+GA   A +  +E+ +   D   E L  N+  E F+
Sbjct: 26  YHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVDDPEEVLQPNETREFFI 85

Query: 301 VNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRV 360
           +  +                                     G+  L+ RR+    AW RV
Sbjct: 86  LTDE----------------------------------NEDGQLTLSIRRIEYMRAWERV 145

Query: 361 RQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQI 420
           RQ++  +  +   V   N GG L RIEGLR F+P   +  R       ++ VG  + ++ 
Sbjct: 146 RQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHISAREAK----EDLVGEDLPLKF 205

Query: 421 TRIVEAKNDVILSERRAW---EMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVS 480
             + E +N ++LS RRA    +M  L    ++ G+V  I P+GA I IG  +  GLLH+S
Sbjct: 206 LEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGIKPYGAFIDIGGVS--GLLHIS 265

Query: 481 NITRARVTSVSDLLVVGEKVKVLVVKSNFP-NKISLSIADLESVPGLFISNKEKVFSEAK 540
            I+   + +   +  V +++KV+++  +    +ISLS   LE  PG  + +++ V   A 
Sbjct: 266 EISHDHIDTPHSVFNVNDEIKVMIIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMAD 310

Query: 541 IMAKKYRQK-LPVIKGVARPLPAPV 560
            MA+ +RQK L   +G+    P  V
Sbjct: 326 EMAEIFRQKRLAEAQGIPYEPPTSV 310

[Close]
BLAST of CmaCh04G024650 vs. ExPASy TrEMBL
Match: A0A6J1JRQ3 (uncharacterized protein LOC111487219 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487219 PE=4 SV=1)

HSP 1 Score: 963.8 bits (2490), Expect = 3.4e-277
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL
Sbjct: 41  FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY
Sbjct: 161 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR
Sbjct: 221 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL
Sbjct: 401 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW
Sbjct: 461 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 527

[Close]
BLAST of CmaCh04G024650 vs. ExPASy TrEMBL
Match: A0A6J1GM71 (uncharacterized protein LOC111455668 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455668 PE=4 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.8e-262
Identity = 466/487 (95.69%), Postives = 475/487 (97.54%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTP ISNSKFCSTS WSDNCNKSKKFTFRERNSVIFCSRN VLRNLSG+QDGTE+IYEL
Sbjct: 41  FLTPLISNSKFCSTSNWSDNCNKSKKFTFRERNSVIFCSRNDVLRNLSGHQDGTEDIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVE+EEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVENEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLL TMLTKEVLRLY
Sbjct: 161 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLGTMLTKEVLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDL+KDAESFMVNGKMGLVKYDNAV D PGPGQPI+ETGTVLFAEVLGRRLGGR
Sbjct: 221 DKEMEFLDLDKDAESFMVNGKMGLVKYDNAVSDEPGPGQPIIETGTVLFAEVLGRRLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVR+SEWN GGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRISEWNAGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVG RIFVQITRIVEAKNDVILSER+AWE LYLREGTLLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGRRIFVQITRIVEAKNDVILSERQAWETLYLREGTLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNR GLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLES PGL
Sbjct: 401 RIGDTNRLGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESEPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKEKVFSEAKIMAKKYRQKLPVIKGV+RPLPAPVPRSE APTTDLPF+KESSMYANW
Sbjct: 461 FISNKEKVFSEAKIMAKKYRQKLPVIKGVSRPLPAPVPRSEHAPTTDLPFEKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 527

[Close]
BLAST of CmaCh04G024650 vs. ExPASy TrEMBL
Match: A0A6J1GNU5 (uncharacterized protein LOC111455668 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455668 PE=4 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.8e-262
Identity = 466/487 (95.69%), Postives = 475/487 (97.54%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTP ISNSKFCSTS WSDNCNKSKKFTFRERNSVIFCSRN VLRNLSG+QDGTE+IYEL
Sbjct: 41  FLTPLISNSKFCSTSNWSDNCNKSKKFTFRERNSVIFCSRNDVLRNLSGHQDGTEDIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVE+EEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVENEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLL TMLTKEVLRLY
Sbjct: 161 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLGTMLTKEVLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDL+KDAESFMVNGKMGLVKYDNAV D PGPGQPI+ETGTVLFAEVLGRRLGGR
Sbjct: 221 DKEMEFLDLDKDAESFMVNGKMGLVKYDNAVSDEPGPGQPIIETGTVLFAEVLGRRLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVR+SEWN GGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRISEWNAGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVG RIFVQITRIVEAKNDVILSER+AWE LYLREGTLLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGRRIFVQITRIVEAKNDVILSERQAWETLYLREGTLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNR GLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLES PGL
Sbjct: 401 RIGDTNRLGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESEPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKEKVFSEAKIMAKKYRQKLPVIKGV+RPLPAPVPRSE APTTDLPF+KESSMYANW
Sbjct: 461 FISNKEKVFSEAKIMAKKYRQKLPVIKGVSRPLPAPVPRSEHAPTTDLPFEKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 527

[Close]
BLAST of CmaCh04G024650 vs. ExPASy TrEMBL
Match: A0A6J1JIB7 (uncharacterized protein LOC111487219 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487219 PE=4 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 1.0e-220
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0 

Query: 198 MKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGD 257
           MKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGD
Sbjct: 1   MKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGD 60

Query: 258 ENKLDIDMGADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGP 317
           ENKLDIDMGADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGP
Sbjct: 61  ENKLDIDMGADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGP 120

Query: 318 GPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWN 377
           GPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWN
Sbjct: 121 GPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWN 180

Query: 378 TGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW 437
           TGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW
Sbjct: 181 TGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW 240

Query: 438 EMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVK 497
           EMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVK
Sbjct: 241 EMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVK 300

Query: 498 VLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPA 557
           VLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPA
Sbjct: 301 VLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPA 360

Query: 558 PVPRSECAPTTDLPFDKESSMYANWKWFKFER 590
           PVPRSECAPTTDLPFDKESSMYANWKWFKFER
Sbjct: 361 PVPRSECAPTTDLPFDKESSMYANWKWFKFER 392

[Close]
BLAST of CmaCh04G024650 vs. ExPASy TrEMBL
Match: A0A6J1JML4 (uncharacterized protein LOC111487219 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487219 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 4.3e-216
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 

Query: 206 SVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDM 265
           SVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDM
Sbjct: 11  SVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDM 70

Query: 266 GADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVE 325
           GADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVE
Sbjct: 71  GADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVE 130

Query: 326 TGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRI 385
           TGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRI
Sbjct: 131 TGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRI 190

Query: 386 EGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREG 445
           EGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREG
Sbjct: 191 EGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREG 250

Query: 446 TLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNF 505
           TLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNF
Sbjct: 251 TLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNF 310

Query: 506 PNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECA 565
           PNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECA
Sbjct: 311 PNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECA 370

Query: 566 PTTDLPFDKESSMYANWKWFKFER 590
           PTTDLPFDKESSMYANWKWFKFER
Sbjct: 371 PTTDLPFDKESSMYANWKWFKFER 394

[Close]
BLAST of CmaCh04G024650 vs. NCBI nr
Match: XP_022990309.1 (uncharacterized protein LOC111487219 isoform X1 [Cucurbita maxima])

HSP 1 Score: 963.8 bits (2490), Expect = 7.0e-277
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL
Sbjct: 41  FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY
Sbjct: 161 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR
Sbjct: 221 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL
Sbjct: 401 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW
Sbjct: 461 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 527

[Close]
BLAST of CmaCh04G024650 vs. NCBI nr
Match: XP_022953146.1 (uncharacterized protein LOC111455668 isoform X2 [Cucurbita moschata])

HSP 1 Score: 914.8 bits (2363), Expect = 3.7e-262
Identity = 466/487 (95.69%), Postives = 475/487 (97.54%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTP ISNSKFCSTS WSDNCNKSKKFTFRERNSVIFCSRN VLRNLSG+QDGTE+IYEL
Sbjct: 41  FLTPLISNSKFCSTSNWSDNCNKSKKFTFRERNSVIFCSRNDVLRNLSGHQDGTEDIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVE+EEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVENEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLL TMLTKEVLRLY
Sbjct: 161 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLGTMLTKEVLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDL+KDAESFMVNGKMGLVKYDNAV D PGPGQPI+ETGTVLFAEVLGRRLGGR
Sbjct: 221 DKEMEFLDLDKDAESFMVNGKMGLVKYDNAVSDEPGPGQPIIETGTVLFAEVLGRRLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVR+SEWN GGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRISEWNAGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVG RIFVQITRIVEAKNDVILSER+AWE LYLREGTLLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGRRIFVQITRIVEAKNDVILSERQAWETLYLREGTLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNR GLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLES PGL
Sbjct: 401 RIGDTNRLGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESEPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKEKVFSEAKIMAKKYRQKLPVIKGV+RPLPAPVPRSE APTTDLPF+KESSMYANW
Sbjct: 461 FISNKEKVFSEAKIMAKKYRQKLPVIKGVSRPLPAPVPRSEHAPTTDLPFEKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 527

[Close]
BLAST of CmaCh04G024650 vs. NCBI nr
Match: XP_022953145.1 (uncharacterized protein LOC111455668 isoform X1 [Cucurbita moschata])

HSP 1 Score: 914.8 bits (2363), Expect = 3.7e-262
Identity = 466/487 (95.69%), Postives = 475/487 (97.54%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTP ISNSKFCSTS WSDNCNKSKKFTFRERNSVIFCSRN VLRNLSG+QDGTE+IYEL
Sbjct: 41  FLTPLISNSKFCSTSNWSDNCNKSKKFTFRERNSVIFCSRNDVLRNLSGHQDGTEDIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVE+EEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVENEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLL TMLTKEVLRLY
Sbjct: 161 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLGTMLTKEVLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDL+KDAESFMVNGKMGLVKYDNAV D PGPGQPI+ETGTVLFAEVLGRRLGGR
Sbjct: 221 DKEMEFLDLDKDAESFMVNGKMGLVKYDNAVSDEPGPGQPIIETGTVLFAEVLGRRLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVR+SEWN GGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRISEWNAGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVG RIFVQITRIVEAKNDVILSER+AWE LYLREGTLLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGRRIFVQITRIVEAKNDVILSERQAWETLYLREGTLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNR GLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLES PGL
Sbjct: 401 RIGDTNRLGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESEPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKEKVFSEAKIMAKKYRQKLPVIKGV+RPLPAPVPRSE APTTDLPF+KESSMYANW
Sbjct: 461 FISNKEKVFSEAKIMAKKYRQKLPVIKGVSRPLPAPVPRSEHAPTTDLPFEKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 527

[Close]
BLAST of CmaCh04G024650 vs. NCBI nr
Match: XP_023524678.1 (uncharacterized protein LOC111788550 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 904.4 bits (2336), Expect = 5.0e-259
Identity = 463/487 (95.07%), Postives = 473/487 (97.13%), Query Frame = 0 

Query: 103 FLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYEL 162
           FLTP ISN KFCSTS  SDNCNKSKKFTFRERNSVIFCSRN VLRNLSGNQDGTEEIYEL
Sbjct: 41  FLTPLISNLKFCSTSNLSDNCNKSKKFTFRERNSVIFCSRNDVLRNLSGNQDGTEEIYEL 100

Query: 163 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 222
           SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK
Sbjct: 101 SLLKKPSRASISNGSSSEVHKEVVNPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEK 160

Query: 223 IDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLY 282
           I+GEDESDK ANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLL TMLTKE+LRLY
Sbjct: 161 INGEDESDK-ANKLNVEYYEPKPGDVVVGVVVSGDENKLDIDMGADLLGTMLTKEMLRLY 220

Query: 283 DKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGPGPGQPIVETGTVLFAEVLGRRLGGR 342
           DKEMEFLDL+KDAESFMVNGKMGLVKYDNAV DGPGPGQPIVETGTVLFAEVLGR LGGR
Sbjct: 221 DKEMEFLDLDKDAESFMVNGKMGLVKYDNAVSDGPGPGQPIVETGTVLFAEVLGRTLGGR 280

Query: 343 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRAN 402
           PLLTTRRLFRWLAWHRVRQIKRLNEPIEVR+SEWNTGGLLTRIEGLRAFLPKGELLNRAN
Sbjct: 281 PLLTTRRLFRWLAWHRVRQIKRLNEPIEVRISEWNTGGLLTRIEGLRAFLPKGELLNRAN 340

Query: 403 NFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQI 462
           NFTEWKEYVG RIFVQITRIVEAKNDVILSER+AWE LYLREG LLDGTVTKIFPFGAQI
Sbjct: 341 NFTEWKEYVGRRIFVQITRIVEAKNDVILSERQAWETLYLREGMLLDGTVTKIFPFGAQI 400

Query: 463 RIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGL 522
           RIGDTNRCGLLHVSNITRAR+TSVSDLLVVGEKVKVLVVKSNFPNKISLSIA+LES PGL
Sbjct: 401 RIGDTNRCGLLHVSNITRARITSVSDLLVVGEKVKVLVVKSNFPNKISLSIAELESEPGL 460

Query: 523 FISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPAPVPRSECAPTTDLPFDKESSMYANW 582
           FISNKE+VFSEAKIMAKKYRQKLPVIKGV+RPLPAPVPRSE APTTDLPF+KESSMYANW
Sbjct: 461 FISNKEQVFSEAKIMAKKYRQKLPVIKGVSRPLPAPVPRSEPAPTTDLPFEKESSMYANW 520

Query: 583 KWFKFER 590
           KWFKFER
Sbjct: 521 KWFKFER 526

[Close]
BLAST of CmaCh04G024650 vs. NCBI nr
Match: KAG6602202.1 (Protein PIGMENT DEFECTIVE 338, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 815.8 bits (2106), Expect = 2.3e-232
Identity = 433/512 (84.57%), Postives = 444/512 (86.72%), Query Frame = 0 

Query: 78  MRRRRAQLMRWTAERDANRCGTSILFLTPQISNSKFCSTSYWSDNCNKSKKFTFRERNSV 137
           MRRRRAQLMRWTA++DAN CGTSIL                                   
Sbjct: 1   MRRRRAQLMRWTAKKDANYCGTSIL----------------------------------- 60

Query: 138 IFCSRNGVLRNLSGNQDGTEEIYELSLLKKPSRASISNGSSSEVHKEVVNPDENESLTLF 197
                N VLRNLSG+Q GTEEIYELSLLKKPSRASISNGSSSEVHKEVVNPDENESLTLF
Sbjct: 61  -----NDVLRNLSGDQHGTEEIYELSLLKKPSRASISNGSSSEVHKEVVNPDENESLTLF 120

Query: 198 MKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPGDVVVGVVVSGD 257
           MKFFKIIDSVEDEEEEKALQAF EKIDGEDESDK ANKLNVEYYEPKPGDVVVGVVVSGD
Sbjct: 121 MKFFKIIDSVEDEEEEKALQAFGEKIDGEDESDK-ANKLNVEYYEPKPGDVVVGVVVSGD 180

Query: 258 ENKLDIDMGADLLATMLTKEVLRLYDKEMEFLDLNKDAESFMVNGKMGLVKYDNAVCDGP 317
           ENKLDI+MGADLL TMLTKEVLRLYDKEMEFLDL+KDAESFMVNGKMGLVKYDNAV D P
Sbjct: 181 ENKLDINMGADLLGTMLTKEVLRLYDKEMEFLDLDKDAESFMVNGKMGLVKYDNAVSDEP 240

Query: 318 GPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWN 377
           GPGQPI+ETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVR+SEWN
Sbjct: 241 GPGQPIIETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQIKRLNEPIEVRISEWN 300

Query: 378 TGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW 437
            GGLLTRIEGLRAF+PKGELLNRANNFTEWKEYV              KNDVILSER+AW
Sbjct: 301 AGGLLTRIEGLRAFIPKGELLNRANNFTEWKEYV-------------TKNDVILSERQAW 360

Query: 438 EMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVK 497
           E LYLREGTLLDGTVTKIFPFGAQIRIGDTNR GLLHVSNITRARVTSVSDLLVVGEKVK
Sbjct: 361 ETLYLREGTLLDGTVTKIFPFGAQIRIGDTNRRGLLHVSNITRARVTSVSDLLVVGEKVK 420

Query: 498 VLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVARPLPA 557
           VLVVKSNFPNKISLSIADLES PGLFISNKEKVFSEAKIMAKKYRQKLPVIKGV RPLPA
Sbjct: 421 VLVVKSNFPNKISLSIADLESEPGLFISNKEKVFSEAKIMAKKYRQKLPVIKGVCRPLPA 458

Query: 558 PVPRSECAPTTDLPFDKESSMYANWKWFKFER 590
           PVPRSE APTTDLPF+KESSMYANWKWF+FER
Sbjct: 481 PVPRSERAPTTDLPFEKESSMYANWKWFEFER 458

[Close]
BLAST of CmaCh04G024650 vs. TAIR 10
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 477.2 bits (1227), Expect = 1.8e-134
Identity = 265/468 (56.62%), Postives = 335/468 (71.58%), Query Frame = 0 

Query: 127 KKFTFRERNSVIFCSRNGVLRNLSGNQDGTEEIYELSLLKKPSRASISNGSSSEVHKEVV 186
           ++F  R    + FCSR  V    +G     EEI    LL KP      N      ++E  
Sbjct: 63  REFAVRGAYGIRFCSREDVSGVGNGGIVAEEEI---ELLNKP------NPLPKSENEESG 122

Query: 187 NPDENESLTLFMKFFKIIDSVEDEEEEKALQAFEEKIDGEDESDKEANKLNVEYYEPKPG 246
             D++  L  F+KFFK       EEE + +         E E   E ++++VEYY+PKPG
Sbjct: 123 KADDDAILEPFLKFFK------PEEEGEGI---------ESEVSDETDRVSVEYYDPKPG 182

Query: 247 DVVVGVVVSGDENKLDIDMGADLLATMLTKEVLRLYDKEMEFL--DLNKDAESFMVNGKM 306
           D VVGVVVSG+ENKLD+++GAD+L TMLTKE+L LYDKE+++L  DL  DAE F+VNGKM
Sbjct: 183 DFVVGVVVSGNENKLDVNIGADMLGTMLTKEILPLYDKELDYLLCDLKYDAEEFLVNGKM 242

Query: 307 GLVKYDN---AVCDGPGPGQPIVETGTVLFAEVLGRRLGGRPLLTTRRLFRWLAWHRVRQ 366
           G+VK D+    + +    G+P+VE GTV+FAEVLGR L GRPLL++RR FR +AWHRVRQ
Sbjct: 243 GIVKDDDEGVEIAEFARQGRPVVEIGTVVFAEVLGRTLSGRPLLSSRRYFRRIAWHRVRQ 302

Query: 367 IKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANNFTEWKEYVGCRIFVQITR 426
           IK+LNEPIEV+++EWNTGGLLTRIEGLRAF+PK EL+ + N FTE KE VG R  VQITR
Sbjct: 303 IKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNTFTELKENVGRRFLVQITR 362

Query: 427 IVEAKNDVILSERRAWEMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRA 486
           + E KND+ILSE+ AWE LYLREGTLL+GTV KI P+GAQ+++GD++R GLLH+SNITR 
Sbjct: 363 LNEDKNDLILSEKVAWEKLYLREGTLLEGTVVKILPYGAQVKLGDSSRSGLLHISNITRR 422

Query: 487 RVTSVSDLLVVGEKVKVLVVKSNFPNKISLSIADLESVPGLFISNKEKVFSEAKIMAKKY 546
           R+ SVSD+L V E VKVLVVKS FP+KISLSIADLES PGLFIS++EKVF+EA+ MAKKY
Sbjct: 423 RIGSVSDVLQVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKY 482

Query: 547 RQKLPVIKGVARPLPAPVPRSECAP-TTDLPFDKESSMYANWKWFKFE 589
           R+K+P++        A  P S+  P T+  P  K+  +YANW+WFKFE
Sbjct: 483 REKMPLV--------ATSPISDRPPITSSFPQGKDEEIYANWEWFKFE 498

[Close]
BLAST of CmaCh04G024650 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 106.3 bits (264), Expect = 8.5e-23
Identity = 70/213 (32.86%), Postives = 121/213 (56.81%), Query Frame = 0 

Query: 344 LLTTRRLFRWLAWHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANN 403
           LL+ R +   LAW R RQ++  +  ++ +V   N GGL+  +EGLR F+P  ++ ++A  
Sbjct: 165 LLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKA-- 224

Query: 404 FTEWKEYVGCRIFVQITRIVEAKNDVILSERRAW--EMLYLREGTLLDGTVTKIFPFGAQ 463
               +E +   I ++   + E +  ++LS R+A       L  G+++ G V  + P+GA 
Sbjct: 225 --AAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAF 284

Query: 464 IRIGDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVKSNFP-NKISLSIADLESVP 523
           I IG  N  GLLHVS I+  RV+ ++ +L  G+ +KV+++  +    ++SLS   LE  P
Sbjct: 285 IDIGGIN--GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTP 344

Query: 524 GLFISNKEKVFSEAKIMAKKYRQKLPVIKGVAR 554
           G  I N + VF +A+ MA+ +RQ++   + +AR
Sbjct: 345 GDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMAR 371

[Close]
BLAST of CmaCh04G024650 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-09
Identity = 53/181 (29.28%), Postives = 86/181 (47.51%), Query Frame = 0 

Query: 356 WHRVRQIKRLNEPIEVRVSEWNTGGLLTRIEGLRAFLPKGELLNRANNFTE--------W 415
           W   +   +  +  E  V  +N GGLL R   L  FLP  + L+ + +  E         
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQ-LSPSRSCKEPQKSIHEIA 156

Query: 416 KEYVGCRIFVQITRIVEAKNDVILSERRAWEMLY---LREGTLLDGTVTKIFPFGAQIRI 475
           K  VG ++ V++ +  E    +ILSE+ A    Y   +  G + +G V  +  +GA I +
Sbjct: 157 KTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHL 216

Query: 476 ----GDTNRCGLLHVSNITRARVTSVSDLLVVGEKVKVLVVK-SNFPNKISLSIADLESV 521
               G  +  GL+HVS ++   V  V D+L  G++V+V+V       ++I+LSI  LE  
Sbjct: 217 RFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDD 276

[Close]
BLAST of CmaCh04G024650 vs. TAIR 10
Match: AT4G29060.1 (elongation factor Ts family protein )

HSP 1 Score: 43.5 bits (101), Expect = 6.8e-04
Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 0 

Query: 432 SERRAWEMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLV 491
           SE  A +   L  G    G V  I PFGA +  G     GL+HVS ++   V  VS ++ 
Sbjct: 123 SEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTD-GLVHVSQLSDNFVKDVSSVVT 182

Query: 492 VGEKVKVLVVKSNFPNK-ISLSIADLESVP 521
           +G++VKV +V+++  +K ISL++ + +  P
Sbjct: 183 IGQEVKVRLVEADIESKRISLTMRENDDPP 211

[Close]
BLAST of CmaCh04G024650 vs. TAIR 10
Match: AT4G29060.2 (elongation factor Ts family protein )

HSP 1 Score: 43.5 bits (101), Expect = 6.8e-04
Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 0 

Query: 432 SERRAWEMLYLREGTLLDGTVTKIFPFGAQIRIGDTNRCGLLHVSNITRARVTSVSDLLV 491
           SE  A +   L  G    G V  I PFGA +  G     GL+HVS ++   V  VS ++ 
Sbjct: 123 SEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTD-GLVHVSQLSDNFVKDVSSVVT 182

Query: 492 VGEKVKVLVVKSNFPNK-ISLSIADLESVP 521
           +G++VKV +V+++  +K ISL++ + +  P
Sbjct: 183 IGQEVKVRLVEADIESKRISLTMRENDDPP 211

The following BLAST results are available for this feature:
BLAST of CmaCh04G024650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9H42.6e-13356.62Protein PIGMENT DEFECTIVE 338, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... [more]
P462286.4e-2334.9330S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA... [more]
P293447.0e-2230.9930S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=... [more]
Q93VC71.2e-2132.8630S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ... [more]
P735304.6e-2128.3130S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus... [more]
BLAST of CmaCh04G024650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JRQ33.4e-277100.00uncharacterized protein LOC111487219 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GM711.8e-26295.69uncharacterized protein LOC111455668 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GNU51.8e-26295.69uncharacterized protein LOC111455668 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JIB71.0e-220100.00uncharacterized protein LOC111487219 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JML44.3e-216100.00uncharacterized protein LOC111487219 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CmaCh04G024650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022990309.17.0e-277100.00uncharacterized protein LOC111487219 isoform X1 [Cucurbita maxima][more]
XP_022953146.13.7e-26295.69uncharacterized protein LOC111455668 isoform X2 [Cucurbita moschata][more]
XP_022953145.13.7e-26295.69uncharacterized protein LOC111455668 isoform X1 [Cucurbita moschata][more]
XP_023524678.15.0e-25995.07uncharacterized protein LOC111788550 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6602202.12.3e-23284.57Protein PIGMENT DEFECTIVE 338, chloroplastic, partial [Cucurbita argyrosperma su... [more]
BLAST of CmaCh04G024650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71720.11.8e-13456.62Nucleic acid-binding proteins superfamily [more]
AT5G30510.18.5e-2332.86ribosomal protein S1 [more]
AT3G23700.11.8e-0929.28Nucleic acid-binding proteins superfamily [more]
AT4G29060.16.8e-0434.44elongation factor Ts family protein [more]
AT4G29060.26.8e-0434.44elongation factor Ts family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 443..514
e-value: 2.0E-12
score: 57.3
coord: 364..434
e-value: 2.0
score: 15.4
NoneNo IPR availableGENE3D2.40.50.140coord: 442..521
e-value: 1.9E-16
score: 61.9
NoneNo IPR availablePANTHERPTHR15838:SF3F14O23.10 PROTEINcoord: 114..589
NoneNo IPR availablePANTHERPTHR15838NUCLEOLAR PROTEIN OF 40 KDAcoord: 114..589
NoneNo IPR availableCDDcd04465S1_RPS1_repeat_ec2_hs2coord: 366..434
e-value: 3.99765E-14
score: 65.1728
IPR003029S1 domainPFAMPF00575S1coord: 442..513
e-value: 3.0E-8
score: 33.9
IPR003029S1 domainPROSITEPS50126S1coord: 445..514
score: 15.678909
IPR003029S1 domainPROSITEPS50126S1coord: 366..434
score: 8.861833
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 364..437
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 438..514

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G024650.1CmaCh04G024650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005840 ribosome
molecular_function GO:0003676 nucleic acid binding