CmaCh04G024280 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTCAAATCCTGTAGTCGCATCAACCATTTCTTGAATTTCAGAGCTTTCTTAAGATCCAAAATATAAAGAGTTTGGCTTTGATTTTGATATATGAAGAGGAAGAGAGCAGCGGAAATGGAATCAGAAATGAGGTCTGCAACGGCGCAGCTTGCTGTGGATCATGCTGCTCCCGACATACCCACCAAGCCCTTTCTTTCTCTTTGCAATTTGATCCTTCGATTTCTGGGTATTTCTCTGTTCCTCTCTGAGAATTGTAGAAAGGGAATGGTTTGTGTTAAATGGGGGATTTTGTTGTTGTTGTTGTTGTTGTTGCAGATAAGGTAGGGCCGACAATGGCTGTTCTTCGACAGGACATTCATAAGAACATTCAGGTAGAAACAGAGCATTAAAATGGGGAACATGTGTGTGTGTTTATGCCTCTACTGATACTAAGTGGTGGTGGGTTGAAATGCAGAGGTTGGAGAGTGTGTACGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAAGCTCACCAGTTGTAGCAGAGCCTTTCTGTGGCTTACAAGGTAGCTACTTATGTTCTTTCATCGAATTGTTGACTGCTTCCTTGACTTCTGCTCATTGCTTGTCATGCAAATGGTTGATTCCTAAACTTTTGTTGTGTTCTGTGTGGTCATTCGACGAGGAAAAGTCTATTTCTGTAACGGCCTAAGCCTATTTCTAGTAGATATTGTCCTTTTTGGGTTTTCTTTTGAAATTTTTAAAATACAATCTGCTAGAAAGAAGTTTTCACTCTCTTATAAAAAATGTTTCGTTTTCCTCCCCAGTTGATGCGGGGTCCCACAATATCCACACTTTTCGAGGACCAACATCCTCCCCAACTGATGTGGGATCTCATAATATCTATCTCCTTCGGAGACCAACGTCCTCACTAGCACTCGTTCCTTTTTCTAATCGTGTTTTGTTCTCCTCCCCAACCGATGTGCGGTCTCACAATATCCACTCTCTTCAGGGACCAACTTCCTCCCCAACTGATGTGGGATCTCACAATATCTACCTCCTTCAGGGACCAACGTCCTCCCTGACACTCATTCCTTTCTCCAATCAATGTGGGATTCTCTTTGAGCTTTCCCTTTCAGGCTTCCCCTCCGATTTTTAAAACATGTCTACTAGAGAAAAGTTTCCACACCTTTATAAGGAATGCTTCATTCTTCTCTCCAACCGATATGAGATTTCACAATTTTCTTTGTGTGTGATTCTCTTTCCCATATTCTCGATTAGGAGTTTTATGAAGTTTTCCTGTGATATAGGTCCCTCGATTTTACAGTGGCGTTATTAGAGAAGTCCAGAGAAGAACCAAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTGTCAAAGTATTCTCTTTTGCTTTTGTTTGCCTTCTCTTAAATGATCATCATGGTACTTTTGTATAAACCAAAAAACTATGGTTCTTACAGATAGCTCTGAAGCTTGTGCCCGATAGCGAAAGGTTCGATCGTCTCCTAACGGCCAACGACGAACAAAACGATACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTGGAACACATCCATTCTATTCTGGTAAATCCAAGTATTATTTTCAGCACTATAATCAATTTCATGACAGTTTACCTACTGAGAGTGTTCTTATGTGTCTTTTCCCAGAGACTGTACAGGTTAGATCGATTAAAGTCTGCCTAGAGAAGAAGTAATGGACAAAGGAATGAAGAATGGATCCTCAAGTTTTGACGTTTTCTTGTACATAACACTGCCATACGTATCACAGAAAAGTTTCTCTCTTTTTCAAATCTTTGAGATCCCAGAAGCATTCTTTAAAAGGGTGTGTAAATCTCTCTCTAGCAGACACGTTTTAAAATTCATAAGGCTTACAGCAATACGTAACTGACCAAAACAAACAATATCTGCTAGCGGCGACCTTAGACTGTTACATATTATATTCATGCCCTTCTATTCTAGGTTCTCTTACCGATGTAATGGTTAGGCTTGTAATGTAAGTAAGAGTTTCTAGGCCTTATGTCGAGTCTCTAATCTTCGACCGTGCTGTTTAGTCAATGGCAACAAAACAATTACCTCATAAAGATATGCTTCCGTTCTG GGTCAAATCCTGTAGTCGCATCAACCATTTCTTGAATTTCAGAGCTTTCTTAAGATCCAAAATATAAAGAGTTTGGCTTTGATTTTGATATATGAAGAGGAAGAGAGCAGCGGAAATGGAATCAGAAATGAGGTCTGCAACGGCGCAGCTTGCTGTGGATCATGCTGCTCCCGACATACCCACCAAGCCCTTTCTTTCTCTTTGCAATTTGATCCTTCGATTTCTGGATAAGGTAGGGCCGACAATGGCTGTTCTTCGACAGGACATTCATAAGAACATTCAGAGGTTGGAGAGTGTGTACGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAAGCTCACCAGTTGTAGCAGAGCCTTTCTGTGGCTTACAAGGTCCCTCGATTTTACAGTGGCGTTATTAGAGAAGTCCAGAGAAGAACCAAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTGTCAAAATAGCTCTGAAGCTTGTGCCCGATAGCGAAAGGTTCGATCGTCTCCTAACGGCCAACGACGAACAAAACGATACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTGGAACACATCCATTCTATTCTGAGACTGTACAGGTTAGATCGATTAAAGTCTGCCTAGAGAAGAAGTAATGGACAAAGGAATGAAGAATGGATCCTCAAGTTTTGACGTTTTCTTGTACATAACACTGCCATACGTATCACAGAAAAGTTTCTCTCTTTTTCAAATCTTTGAGATCCCAGAAGCATTCTTTAAAAGGGTGTGTAAATCTCTCTCTAGCAGACACGTTTTAAAATTCATAAGGCTTACAGCAATACGTAACTGACCAAAACAAACAATATCTGCTAGCGGCGACCTTAGACTGTTACATATTATATTCATGCCCTTCTATTCTAGGTTCTCTTACCGATGTAATGGTTAGGCTTGTAATGTAAGTAAGAGTTTCTAGGCCTTATGTCGAGTCTCTAATCTTCGACCGTGCTGTTTAGTCAATGGCAACAAAACAATTACCTCATAAAGATATGCTTCCGTTCTG ATGAAGAGGAAGAGAGCAGCGGAAATGGAATCAGAAATGAGGTCTGCAACGGCGCAGCTTGCTGTGGATCATGCTGCTCCCGACATACCCACCAAGCCCTTTCTTTCTCTTTGCAATTTGATCCTTCGATTTCTGGATAAGGTAGGGCCGACAATGGCTGTTCTTCGACAGGACATTCATAAGAACATTCAGAGGTTGGAGAGTGTGTACGAGTCTGATCCTTTGTTGTATTCGAATATGGTGGAAGTTTTGAAGAAAGAGATGAATGATGGAATTGCTAGGAAGCTCACCAGTTGTAGCAGAGCCTTTCTGTGGCTTACAAGGTCCCTCGATTTTACAGTGGCGTTATTAGAGAAGTCCAGAGAAGAACCAAGGCTGAGCATGGAGCAAGCAGTAGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTGTCAAAATAGCTCTGAAGCTTGTGCCCGATAGCGAAAGGTTCGATCGTCTCCTAACGGCCAACGACGAACAAAACGATACCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAGCTCTCACCTTTTCTGGAACACATCCATTCTATTCTGAGACTGTACAGGTTAGATCGATTAAAGTCTGCCTAG MKRKRAAEMESEMRSATAQLAVDHAAPDIPTKPFLSLCNLILRFLDKVGPTMAVLRQDIHKNIQRLESVYESDPLLYSNMVEVLKKEMNDGIARKLTSCSRAFLWLTRSLDFTVALLEKSREEPRLSMEQAVEDAYNLTLKPWHGWISSAAVKIALKLVPDSERFDRLLTANDEQNDTLVEEIDSFISQLSPFLEHIHSILRLYRLDRLKSA Homology
BLAST of CmaCh04G024280 vs. ExPASy Swiss-Prot
Match: Q9LU33 (Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.9e-58 Identity = 121/233 (51.93%), Postives = 162/233 (69.53%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy Swiss-Prot
Match: Q6NLQ3 (Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.2e-51 Identity = 111/223 (49.78%), Postives = 148/223 (66.37%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy Swiss-Prot
Match: O22797 (Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.3e-29 Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy Swiss-Prot
Match: D3ZY60 (Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=10116 GN=Plekha8 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.9e-16 Identity = 55/187 (29.41%), Postives = 96/187 (51.34%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy Swiss-Prot
Match: Q80W71 (Pleckstrin homology domain-containing family A member 8 OS=Mus musculus OX=10090 GN=Plekha8 PE=1 SV=2) HSP 1 Score: 84.0 bits (206), Expect = 2.3e-15 Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy TrEMBL
Match: A0A6J1JRD9 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486880 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 4.7e-112 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy TrEMBL
Match: A0A6J1E6H1 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431144 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.3e-109 Identity = 206/212 (97.17%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy TrEMBL
Match: A0A6J1JGT9 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486880 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107 Identity = 212/240 (88.33%), Postives = 212/240 (88.33%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy TrEMBL
Match: A0A6J1E660 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431144 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.1e-104 Identity = 206/240 (85.83%), Postives = 210/240 (87.50%), Query Frame = 0
BLAST of CmaCh04G024280 vs. ExPASy TrEMBL
Match: A0A6J1FHG5 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445490 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 8.6e-90 Identity = 174/219 (79.45%), Postives = 192/219 (87.67%), Query Frame = 0
BLAST of CmaCh04G024280 vs. NCBI nr
Match: XP_022989803.1 (glycolipid transfer protein 3-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 413.7 bits (1062), Expect = 9.7e-112 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CmaCh04G024280 vs. NCBI nr
Match: XP_022923464.1 (glycolipid transfer protein 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108 Identity = 206/212 (97.17%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmaCh04G024280 vs. NCBI nr
Match: KAG6602162.1 (Glycolipid transfer protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108 Identity = 205/212 (96.70%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmaCh04G024280 vs. NCBI nr
Match: XP_022989802.1 (glycolipid transfer protein 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 398.7 bits (1023), Expect = 3.2e-107 Identity = 212/240 (88.33%), Postives = 212/240 (88.33%), Query Frame = 0
BLAST of CmaCh04G024280 vs. NCBI nr
Match: XP_023546408.1 (glycolipid transfer protein 3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.5 bits (1020), Expect = 7.2e-107 Identity = 203/212 (95.75%), Postives = 209/212 (98.58%), Query Frame = 0
BLAST of CmaCh04G024280 vs. TAIR 10
Match: AT3G21260.3 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 226.5 bits (576), Expect = 2.0e-59 Identity = 121/233 (51.93%), Postives = 162/233 (69.53%), Query Frame = 0
BLAST of CmaCh04G024280 vs. TAIR 10
Match: AT1G21360.1 (glycolipid transfer protein 2 ) HSP 1 Score: 204.5 bits (519), Expect = 8.3e-53 Identity = 111/223 (49.78%), Postives = 148/223 (66.37%), Query Frame = 0
BLAST of CmaCh04G024280 vs. TAIR 10
Match: AT3G21260.2 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 175.6 bits (444), Expect = 4.1e-44 Identity = 83/147 (56.46%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of CmaCh04G024280 vs. TAIR 10
Match: AT3G21260.1 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42 Identity = 80/143 (55.94%), Postives = 110/143 (76.92%), Query Frame = 0
BLAST of CmaCh04G024280 vs. TAIR 10
Match: AT2G33470.1 (glycolipid transfer protein 1 ) HSP 1 Score: 131.3 bits (329), Expect = 8.9e-31 Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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